Jatropha Genome Database

JcCA0292331.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0292331.10 + phase: 0 
         (60 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29810.1 | Symbols: ATMKK2, MKK2, MK1 | ATMKK2 (ARABIDOPSIS T...    70   3e-13
AT4G29810.2 | Symbols: ATMKK2, MKK2, MK1 | ATMKK2 (ARABIDOPSIS T...    62   6e-11
AT4G29810.3 | Symbols: ATMKK2, MKK2, MK1 | ATMKK2 (ARABIDOPSIS T...    62   6e-11
AT4G26070.1 | Symbols: MEK1, NMAPKK, ATMEK1, MKK1 | MEK1 (MAP KI...    57   2e-09
AT4G26070.3 | Symbols: MEK1, NMAPKK, ATMEK1, MKK1 | MEK1 (MAP KI...    57   2e-09
AT4G26070.2 | Symbols: MEK1, NMAPKK, ATMEK1, MKK1 | MEK1 (MAP KI...    57   2e-09

>AT4G29810.1 | Symbols: ATMKK2, MKK2, MK1 | ATMKK2 (ARABIDOPSIS
          THALIANA MAP KINASE KINASE 2); MAP kinase kinase/
          kinase | chr4:14593299-14595241 REVERSE
          Length = 363

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 44/57 (77%), Gaps = 2/57 (3%)

Query: 1  MKKGSLNPNVKLKLSLPPPAEVSLSKFLTQSGTFMDGDLLVNRDGVRIVSQIESEAV 57
          MKKG  + N  LKL++P   E S++KFLTQSGTF DGDL VN+DGVRI+SQ+E E +
Sbjct: 1  MKKGGFSNN--LKLAIPVAGEQSITKFLTQSGTFKDGDLRVNKDGVRIISQLEPEVL 55


>AT4G29810.2 | Symbols: ATMKK2, MKK2, MK1 | ATMKK2 (ARABIDOPSIS
          THALIANA MAP KINASE KINASE 2); MAP kinase kinase/
          kinase | chr4:14593299-14595241 REVERSE
          Length = 372

 Score = 62.4 bits (150), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 11/66 (16%)

Query: 1  MKKGSLNPNVKLKLSLPPPAEVSLSKFL---------TQSGTFMDGDLLVNRDGVRIVSQ 51
          MKKG  + N  LKL++P   E S++KFL         TQSGTF DGDL VN+DGVRI+SQ
Sbjct: 1  MKKGGFSNN--LKLAIPVAGEQSITKFLRKGFGSLCRTQSGTFKDGDLRVNKDGVRIISQ 58

Query: 52 IESEAV 57
          +E E +
Sbjct: 59 LEPEVL 64


>AT4G29810.3 | Symbols: ATMKK2, MKK2, MK1 | ATMKK2 (ARABIDOPSIS
          THALIANA MAP KINASE KINASE 2); MAP kinase kinase/
          kinase | chr4:14593479-14595241 REVERSE
          Length = 338

 Score = 62.4 bits (150), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 11/66 (16%)

Query: 1  MKKGSLNPNVKLKLSLPPPAEVSLSKFL---------TQSGTFMDGDLLVNRDGVRIVSQ 51
          MKKG  + N  LKL++P   E S++KFL         TQSGTF DGDL VN+DGVRI+SQ
Sbjct: 1  MKKGGFSNN--LKLAIPVAGEQSITKFLRKGFGSLCRTQSGTFKDGDLRVNKDGVRIISQ 58

Query: 52 IESEAV 57
          +E E +
Sbjct: 59 LEPEVL 64


>AT4G26070.1 | Symbols: MEK1, NMAPKK, ATMEK1, MKK1 | MEK1 (MAP
          KINASE/ ERK KINASE 1); MAP kinase kinase/ kinase/
          protein binding | chr4:13217797-13219381 FORWARD
          Length = 308

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 4/56 (7%)

Query: 1  MKKGSLNPNVKLKLSLPPPAEVSLSKFLTQSGTFMDGDLLVNRDGVRIVSQIESEA 56
          M +GSL PN    + LPP  E S+SKFLTQSGTF DGDL VN+DG++ VS  E  A
Sbjct: 1  MNRGSLCPN---PICLPP-LEQSISKFLTQSGTFKDGDLRVNKDGIQTVSLSEPGA 52


>AT4G26070.3 | Symbols: MEK1, NMAPKK, ATMEK1, MKK1 | MEK1 (MAP
          KINASE/ ERK KINASE 1); MAP kinase kinase/ kinase/
          protein binding | chr4:13217797-13219695 FORWARD
          Length = 354

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 4/56 (7%)

Query: 1  MKKGSLNPNVKLKLSLPPPAEVSLSKFLTQSGTFMDGDLLVNRDGVRIVSQIESEA 56
          M +GSL PN    + LPP  E S+SKFLTQSGTF DGDL VN+DG++ VS  E  A
Sbjct: 1  MNRGSLCPN---PICLPP-LEQSISKFLTQSGTFKDGDLRVNKDGIQTVSLSEPGA 52


>AT4G26070.2 | Symbols: MEK1, NMAPKK, ATMEK1, MKK1 | MEK1 (MAP
          KINASE/ ERK KINASE 1); MAP kinase kinase/ kinase/
          protein binding | chr4:13217797-13219695 FORWARD
          Length = 354

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 4/56 (7%)

Query: 1  MKKGSLNPNVKLKLSLPPPAEVSLSKFLTQSGTFMDGDLLVNRDGVRIVSQIESEA 56
          M +GSL PN    + LPP  E S+SKFLTQSGTF DGDL VN+DG++ VS  E  A
Sbjct: 1  MNRGSLCPN---PICLPP-LEQSISKFLTQSGTFKDGDLRVNKDGIQTVSLSEPGA 52