Jatropha Genome Database

JcCA0291961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0291961.10 - phase: 0 /partial
         (158 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33320.1 | Symbols:  | C2 domain-containing protein | chr2:14...   218   8e-58
AT1G04540.1 | Symbols:  | C2 domain-containing protein | chr1:12...   217   2e-57
AT2G13350.1 | Symbols:  | C2 domain-containing protein | chr2:55...   177   4e-45
AT3G04360.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   151   1e-37
AT4G01200.1 | Symbols:  | C2 domain-containing protein | chr4:50...   125   2e-29
AT3G16510.1 | Symbols:  | C2 domain-containing protein | chr3:56...    62   2e-10
AT2G40815.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    53   7e-08
AT4G15755.1 | Symbols:  | C2 domain-containing protein | chr4:89...    49   2e-06

>AT2G33320.1 | Symbols:  | C2 domain-containing protein |
           chr2:14119526-14121334 REVERSE
          Length = 602

 Score =  218 bits (556), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 104/154 (67%), Positives = 121/154 (78%), Gaps = 5/154 (3%)

Query: 9   FQLLELNVISGQDLAQVSRKMRTYAVAWVHPERKLSTRLDIYSHNNPTWNDKFVFRVDDE 68
           FQLLELN+IS QDLA VSRKM+TYAVAWVH ERKL+TR+D     NPTWNDKFVFRV ++
Sbjct: 7   FQLLELNIISAQDLAPVSRKMKTYAVAWVHSERKLTTRVDYTGGGNPTWNDKFVFRVSED 66

Query: 69  FLYRETSAIMVEIYAVSWFRDIHVGTVRVIVGNLIPPAEHKKHQ-----KHGVQLGMRFV 123
           FLY +TSA++VEIYA+ WFRD+HVGTVRV++ NLIPP     ++     +     GMRFV
Sbjct: 67  FLYADTSAVVVEIYALHWFRDVHVGTVRVLISNLIPPNRRPGYRSNEEYRRTPPPGMRFV 126

Query: 124 ALQVRRRSGRPQGILNIGVAFLDASRKSMPLYTQ 157
           ALQVRR SGRPQGILNIGV  LD S +SMPLYT 
Sbjct: 127 ALQVRRPSGRPQGILNIGVGILDGSMRSMPLYTN 160


>AT1G04540.1 | Symbols:  | C2 domain-containing protein |
           chr1:1237256-1239061 FORWARD
          Length = 601

 Score =  217 bits (553), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 104/163 (63%), Positives = 125/163 (76%), Gaps = 7/163 (4%)

Query: 1   MSRVIPQPFQLLELNVISGQDLAQVSRKMRTYAVAWVHPERKLSTRLDIYSHNNPTWNDK 60
           MS + P  FQLLELN+IS QDLA V+RK +TYAVAWVH ERKL+TR+D     NPTWNDK
Sbjct: 1   MSMMFPS-FQLLELNIISAQDLAPVARKTKTYAVAWVHSERKLTTRVDYNGGTNPTWNDK 59

Query: 61  FVFRVDDEFLYRETSAIMVEIYAVSWFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQL-- 118
           FVFRV++EFLY +TSA+++EIYA+ WFRD+HVGTVRV++ NLIPP     ++    +   
Sbjct: 60  FVFRVNEEFLYADTSAVVIEIYALHWFRDVHVGTVRVLISNLIPPNRRPGYRTSNNEYRR 119

Query: 119 ----GMRFVALQVRRRSGRPQGILNIGVAFLDASRKSMPLYTQ 157
               GMRFVALQVRR SGRPQGILNIGV  +D S +SMPLYT 
Sbjct: 120 TPPPGMRFVALQVRRTSGRPQGILNIGVGLIDGSMRSMPLYTH 162


>AT2G13350.1 | Symbols:  | C2 domain-containing protein |
           chr2:5536525-5537730 REVERSE
          Length = 401

 Score =  177 bits (448), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 80/147 (54%), Positives = 107/147 (72%), Gaps = 11/147 (7%)

Query: 8   PFQLLELNVISGQDLAQVSRKMRTYAVAWVHPERKLSTRLDIYSHNNPTWNDKFVFRVDD 67
           P Q+LELN+IS Q+LA V+R M+TYA+AW+ PERKL+TR+D     +PTWNDKFVFR+D+
Sbjct: 6   PCQILELNIISAQELAPVARCMKTYAIAWIDPERKLTTRVDNTGGTSPTWNDKFVFRLDE 65

Query: 68  EFLYRETSAIMVEIYAVSWFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQLGMRFVALQV 127
           E LY  TS +++EIYA+ WF+DIHVGTV+ ++ +L+ P+             MRFV L+V
Sbjct: 66  EALYDATSIVVIEIYALHWFKDIHVGTVQALISDLVSPSS-----------AMRFVTLEV 114

Query: 128 RRRSGRPQGILNIGVAFLDASRKSMPL 154
            R SGRP G+LNI V  +D S +SMPL
Sbjct: 115 LRASGRPHGLLNIAVGLIDNSGQSMPL 141


>AT3G04360.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 9 plant
           structures; EXPRESSED DURING: L mature pollen stage, M
           germinated pollen stage, 4 anthesis, C globular stage,
           petal differentiation and expansion stage; CONTAINS
           InterPro DOMAIN/s: C2 membrane targeting protein
           (InterPro:IPR018029), C2 calcium/lipid-binding region,
           CaLB (InterPro:IPR008973), C2 calcium-dependent membrane
           targeting (InterPro:IPR000008); BEST Arabidopsis
           thaliana protein match is: C2 domain-containing protein
           (TAIR:AT2G33320.1); Has 156 Blast hits to 156 proteins
           in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0;
           Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes -
           0 (source: NCBI BLink). | chr3:1157025-1158200 REVERSE
          Length = 391

 Score =  151 bits (382), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/148 (52%), Positives = 103/148 (69%), Gaps = 4/148 (2%)

Query: 11  LLELNVISGQDLAQVSRKMRTYAVAWVH--PERKLSTRLDIYSHNNPTWNDKFVFRVDDE 68
           +LE+N+IS QDLA VSR M+TY+VAW++  P RKL+TR+D  +  NP WN+KFVFRV+D+
Sbjct: 10  VLEINLISAQDLAPVSRNMKTYSVAWINTDPMRKLTTRVDQSNRANPIWNEKFVFRVNDK 69

Query: 69  FLYRETSAIMVEIYAVSWFRDIHVGTVRVIVGNLIPP--AEHKKHQKHGVQLGMRFVALQ 126
            LY + SAI++EIYA +W +D  VGTV V++ +L  P       +   G    MR V LQ
Sbjct: 70  ILYVDASAIVIEIYAAAWAKDALVGTVNVLLSDLFAPWSGFGDGNDGGGGNNNMRLVTLQ 129

Query: 127 VRRRSGRPQGILNIGVAFLDASRKSMPL 154
           +RR SGR QG L +GVA LD  ++SMPL
Sbjct: 130 IRRPSGRLQGFLRLGVALLDGGQRSMPL 157


>AT4G01200.1 | Symbols:  | C2 domain-containing protein |
           chr4:506783-507535 REVERSE
          Length = 250

 Score =  125 bits (313), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/143 (46%), Positives = 85/143 (59%), Gaps = 12/143 (8%)

Query: 10  QLLELNVISGQDLAQVSRKMR---TYAVAWVHPERKLSTRLDIYSHNNPTWNDKFVFRVD 66
           Q+LE+N+IS Q L + + K+R   TYA  WV    KL TR+D     NP WNDKFVF+V 
Sbjct: 5   QVLEINLISAQGLKEPTGKLRRLQTYASVWVDSSSKLRTRIDRIGSENPIWNDKFVFQVS 64

Query: 67  DEFLYRETSAIMVEIYAVSWFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQLGMRFVALQ 126
            EFL  ETS + +EIYAV + RD  +GTVR +V N +P A  K             VALQ
Sbjct: 65  PEFLSSETSGVSIEIYAVGYLRDHLIGTVRFLVSNFLPTAAVKVPS---------LVALQ 115

Query: 127 VRRRSGRPQGILNIGVAFLDASR 149
           +RR SG+  G+LNI    +DAS 
Sbjct: 116 IRRPSGKFHGVLNIAAMVMDASE 138


>AT3G16510.1 | Symbols:  | C2 domain-containing protein |
           chr3:5617112-5618194 REVERSE
          Length = 360

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 65/146 (44%), Gaps = 8/146 (5%)

Query: 12  LELNVISGQDLAQVS--RKMRTYAVAWVHPE-----RKLSTRLDIYSHNNPTWNDKFVFR 64
           LELNV S +DL  V+   KM  YAV W+  +      K  T +D    + PTWN    F 
Sbjct: 6   LELNVYSAKDLENVNLITKMDVYAVVWITGDDSRKNHKEKTPIDRTGESEPTWNHTVKFS 65

Query: 65  VDDEFLYRETSAIMVEIYAVSWFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQLGMRFVA 124
           VD    +     ++V++     F D  +G V+V V  L+  +        G  + MRFV 
Sbjct: 66  VDQRLAHEGRLTLVVKLVCDRIFGDKDLGEVQVPVLELLHGSSSPSSNGDGQGM-MRFVT 124

Query: 125 LQVRRRSGRPQGILNIGVAFLDASRK 150
            QVR   G+ QG L     F   + K
Sbjct: 125 YQVRTPFGKGQGSLTFSYRFDSPTFK 150


>AT2G40815.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; CONTAINS InterPro DOMAIN/s:
           C2 calcium-dependent membrane targeting
           (InterPro:IPR000008). | chr2:17034736-17036110 REVERSE
          Length = 367

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 11  LLELNVISGQDL------AQVSRKMRTYAVAWVHPERKLSTRLDIYSHNNPTWNDKFVFR 64
           L+E+ +IS + L           K + YAV W+ PE K  T +D    +NP W  KF   
Sbjct: 5   LVEICMISARGLRVGIGIGSSLLKHQWYAVGWLDPEDKYCTTIDASRADNPVWRTKFATL 64

Query: 65  VDDEFLYRETSAIMVEIYAVS--WFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQLGMRF 122
           +DD  +     A+ VE+Y+    + R    G+  V +   +   ++K+ Q     +    
Sbjct: 65  LDDSTIQDSKLALQVEVYSREPLFLRKRLHGSATVSLKEFL--TKYKQQQSSSKAVIEET 122

Query: 123 VALQVRR-RSGRPQGILNIGV 142
            + Q+R+  S +PQG +++ +
Sbjct: 123 GSYQLRKTNSSKPQGFVDVSI 143


>AT4G15755.1 | Symbols:  | C2 domain-containing protein |
           chr4:8970654-8971523 REVERSE
          Length = 289

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 8/140 (5%)

Query: 12  LELNVISGQDLAQVS--RKMRTYAVAWVHPE-----RKLSTRLDIYSHNNPTWNDKFVFR 64
           LELN+ S ++L  V+   KM  +    ++ E     +K  T +D Y  +NPTWN    F 
Sbjct: 6   LELNINSARNLLNVNLITKMNVFTAITINGENTRKKQKAKTTVDRYGGSNPTWNQTIKFS 65

Query: 65  VDDEFLYRETSAIMVEIYAVSWFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQLGMRFVA 124
           VD+       S++++ + +     +  +G V + +  L+  A        G    M+ ++
Sbjct: 66  VDERSARGGHSSLVMRVISRRVLGNKEIGRVNIPLLELL-NATTPSFNGDGNDHEMKLMS 124

Query: 125 LQVRRRSGRPQGILNIGVAF 144
            QVR  SG+  G L+    F
Sbjct: 125 YQVRTSSGKRSGSLSFSYRF 144