Jatropha Genome Database

JcCA0289051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0289051.10 - phase: 0 
         (259 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02530.1 | Symbols:  | chaperonin, putative | chr3:528806-532...   397   e-111
AT5G16070.1 | Symbols:  | chaperonin, putative | chr5:5247549-52...   382   e-107
AT1G24510.2 | Symbols:  | T-complex protein 1 epsilon subunit, p...    75   5e-14
AT1G24510.1 | Symbols:  | T-complex protein 1 epsilon subunit, p...    74   6e-14
AT5G26360.1 | Symbols:  | chaperonin, putative | chr5:9255561-92...    69   3e-12
AT3G20050.1 | Symbols: ATTCP-1 | ATTCP-1; ATP binding / protein ...    54   1e-07
AT5G20890.1 | Symbols:  | chaperonin, putative | chr5:7087020-70...    52   5e-07

>AT3G02530.1 | Symbols:  | chaperonin, putative | chr3:528806-532457
           REVERSE
          Length = 535

 Score =  397 bits (1020), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 186/220 (84%), Positives = 198/220 (90%)

Query: 1   MVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFF 60
           MVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENC+ILTCNVSLEYEKSEINAGFF
Sbjct: 193 MVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCHILTCNVSLEYEKSEINAGFF 252

Query: 61  YSNAEQREAMVAAERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXX 120
           YSNAEQREAMV AERR VDERV++IIELKNKVC+GNDN+FV++NQKGIDPPS        
Sbjct: 253 YSNAEQREAMVTAERRSVDERVQKIIELKNKVCAGNDNSFVILNQKGIDPPSLDLLAREG 312

Query: 121 XXXXXXXXXXNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNP 180
                     NMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEH+LGEEKYTFVE VKNP
Sbjct: 313 IIALRRAKRRNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHVLGEEKYTFVEQVKNP 372

Query: 181 HSCTILIKGPNDHTIAQIKDALRDGLRAVKNTIEDQAVVL 220
           HSCTILIKGPNDHTIAQIKDA+RDGLR+VKNT+ED+ VVL
Sbjct: 373 HSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTLEDECVVL 412


>AT5G16070.1 | Symbols:  | chaperonin, putative |
           chr5:5247549-5251050 REVERSE
          Length = 535

 Score =  382 bits (982), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 185/220 (84%), Positives = 193/220 (87%), Gaps = 1/220 (0%)

Query: 1   MVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFF 60
           MVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENC+ILTCNVSLEYEKSEINAGFF
Sbjct: 193 MVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCHILTCNVSLEYEKSEINAGFF 252

Query: 61  YSNAEQREAMVAAERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXX 120
           YSNAEQREAMV AERR VDERVK+IIELK KVC  ND NFVVINQKGIDPPS        
Sbjct: 253 YSNAEQREAMVTAERRSVDERVKKIIELKKKVCGDND-NFVVINQKGIDPPSLDLLAREG 311

Query: 121 XXXXXXXXXXNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNP 180
                     NMERLVLACGGEAVNSVDDLTP+ LGWAGLVYEH+LGEEKYTFVE VKNP
Sbjct: 312 IIGLRRAKRRNMERLVLACGGEAVNSVDDLTPESLGWAGLVYEHVLGEEKYTFVEQVKNP 371

Query: 181 HSCTILIKGPNDHTIAQIKDALRDGLRAVKNTIEDQAVVL 220
           +SCTILIKGPNDHTIAQIKDA+RDGLR+VKNTIED+ VVL
Sbjct: 372 NSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTIEDECVVL 411


>AT1G24510.2 | Symbols:  | T-complex protein 1 epsilon subunit,
           putative / TCP-1-epsilon, putative / chaperonin,
           putative | chr1:8685504-8687660 REVERSE
          Length = 459

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 11/208 (5%)

Query: 14  DTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVAA 73
           DT L+ G+++D    HP M ++ E+ +I       E  K +          E+ E +   
Sbjct: 141 DTELIYGILIDKDMSHPQMPKQIEDAHIAILTCPFEPPKPKTKHKVDIDTVEKFETLRKQ 200

Query: 74  ERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXXNME 133
           E++  DE V++  ++            +VI Q G D  +                   +E
Sbjct: 201 EQQYFDEMVQKCKDV---------GATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELE 251

Query: 134 RLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILG--EEKYTFVENVKNPHSCTILIKGPN 191
            + +A GG  V    +LTP+ LG AG+V E   G  +E+  ++E+  N  + T+ I+G N
Sbjct: 252 LIAIATGGRIVPRFQELTPEKLGKAGVVREKSFGTTKERMLYIEHCANSKAVTVFIRGGN 311

Query: 192 DHTIAQIKDALRDGLRAVKNTIEDQAVV 219
              I + K ++ D L   +N I ++++V
Sbjct: 312 KMMIEETKRSIHDALCVARNLIRNKSIV 339


>AT1G24510.1 | Symbols:  | T-complex protein 1 epsilon subunit,
           putative / TCP-1-epsilon, putative / chaperonin,
           putative | chr1:8685504-8688101 REVERSE
          Length = 535

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 11/208 (5%)

Query: 14  DTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVAA 73
           DT L+ G+++D    HP M ++ E+ +I       E  K +          E+ E +   
Sbjct: 217 DTELIYGILIDKDMSHPQMPKQIEDAHIAILTCPFEPPKPKTKHKVDIDTVEKFETLRKQ 276

Query: 74  ERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXXNME 133
           E++  DE V++  ++            +VI Q G D  +                   +E
Sbjct: 277 EQQYFDEMVQKCKDV---------GATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELE 327

Query: 134 RLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILG--EEKYTFVENVKNPHSCTILIKGPN 191
            + +A GG  V    +LTP+ LG AG+V E   G  +E+  ++E+  N  + T+ I+G N
Sbjct: 328 LIAIATGGRIVPRFQELTPEKLGKAGVVREKSFGTTKERMLYIEHCANSKAVTVFIRGGN 387

Query: 192 DHTIAQIKDALRDGLRAVKNTIEDQAVV 219
              I + K ++ D L   +N I ++++V
Sbjct: 388 KMMIEETKRSIHDALCVARNLIRNKSIV 415


>AT5G26360.1 | Symbols:  | chaperonin, putative |
           chr5:9255561-9258891 REVERSE
          Length = 555

 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 15/239 (6%)

Query: 14  DTRLVEGLVLDHGSRHP-DMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVA 72
           D+ +++G++ +     P  MKR+  N  I+  +  LEY+K E          E  E ++ 
Sbjct: 210 DSEVLKGVMFNKDVVAPGKMKRKIVNPRIILLDCPLEYKKGENQTNAELVREEDWEVLLK 269

Query: 73  AERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXXNM 132
            E   ++    +I++ K  +         VI +KG+   +                  + 
Sbjct: 270 LEEEYIENICVQILKFKPDL---------VITEKGLSDLACHYFSKAGVSAIRRLRKTDN 320

Query: 133 ERLVLACGGEAVNSVDDLTPDCLG-WAGLVYEHILGEEKYTFVENVKNPHSCTILIKGPN 191
            R+  ACG   VN  D+L    +G  AGL     +G++ ++F+ + K P +CT+L++GP+
Sbjct: 321 NRIAKACGAVIVNRPDELQESDIGTGAGLFEVKKIGDDFFSFIVDCKEPKACTVLLRGPS 380

Query: 192 DHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFPHRNLRVGNWIKYFSATDSSIQ--PY 248
              I +++  L+D +   +N I++    LV       L V   +K  SAT   I+  PY
Sbjct: 381 KDFINEVERNLQDAMSVARNIIKNPK--LVPGGGATELTVSATLKQKSATIEGIEKWPY 437


>AT3G20050.1 | Symbols: ATTCP-1 | ATTCP-1; ATP binding / protein
           binding / unfolded protein binding |
           chr3:6998544-7002266 REVERSE
          Length = 545

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 15/212 (7%)

Query: 14  DTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVAA 73
           D+ L+ G  L+ G     M  R     I   + +L+  K ++      ++  + E +   
Sbjct: 210 DSYLLNGYALNTGRAAQGMPLRVSPAKIACLDFNLQKTKMQLGVQVVVNDPRELEKIRQR 269

Query: 74  ERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXXNME 133
           E     ER++++++      +G +   V++  KGID  +                  +M 
Sbjct: 270 EADMTKERIEKLLK------AGAN---VILTTKGIDDMALKYFVEAGAIAVRRVRKEDMR 320

Query: 134 RLVLACGGEAVNSVDDLT------PDCLGWAGLVYEHILGEEKYTFVENVKNPHSCTILI 187
            +  A G   V +  D+       P  LG A  V E  + ++    ++  K   + ++++
Sbjct: 321 HVAKATGATLVTTFADMEGEETFDPAHLGSADEVVEERIADDDVILIKGTKTSSAVSLIL 380

Query: 188 KGPNDHTIAQIKDALRDGLRAVKNTIEDQAVV 219
           +G ND+ + +++ AL D L  VK T+E   VV
Sbjct: 381 RGANDYMLDEMERALHDALCIVKRTLESNTVV 412


>AT5G20890.1 | Symbols:  | chaperonin, putative |
           chr5:7087020-7089906 REVERSE
          Length = 527

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 15/215 (6%)

Query: 14  DTRLVEGLVLDH--GSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMV 71
           D+ L EG +LD   G   P   +R EN  IL  N +++ +K +I       ++  + A +
Sbjct: 206 DSFLDEGFILDKKIGIGQP---KRIENANILVANTAMDTDKVKIYGARVRVDSMTKVAEI 262

Query: 72  -AAERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXX 130
             AE+ ++ ++VK+II        G+  N  V  Q   + P                   
Sbjct: 263 EGAEKEKMKDKVKKII--------GHGINCFVNRQLIYNFPEELFADAGILAIEHADFE- 313

Query: 131 NMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNPHSCTILIKGP 190
            +ERL L  GGE  ++ D+     LG   L+ E ++GE+K       +   +C+I+++G 
Sbjct: 314 GIERLGLVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGCEMGQACSIVLRGA 373

Query: 191 NDHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFP 225
           + H + + + +L D L  +  T+ D  V+L   +P
Sbjct: 374 SHHVLDEAERSLHDALCVLSQTVNDTRVLLGGGWP 408