Jatropha Genome Database

JcCA0289001.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0289001.10 + phase: 0 /partial
         (190 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G03667.1 | Symbols:  | asparagine synthase (glutamine-hydroly...   315   1e-86

>AT2G03667.1 | Symbols:  | asparagine synthase
           (glutamine-hydrolyzing) | chr2:1114179-1117281 FORWARD
          Length = 610

 Score =  315 bits (807), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 149/186 (80%), Positives = 169/186 (90%), Gaps = 1/186 (0%)

Query: 1   DLNIGIALWLAASGDGWVYKGMNN-NADENQQRLRYKSKARIVLVGSGADEQCAGYGRHR 59
           DLNIG ALWLAA GDGW+++   N + +EN QR++YKS ARI+LVG+GADEQCAGYGRHR
Sbjct: 418 DLNIGTALWLAARGDGWIHEDNGNPSVEENNQRVKYKSDARILLVGAGADEQCAGYGRHR 477

Query: 60  TKYRCGSWLGLHEEMKLDMQRIWKRNMGRDDRCIADNGKEARFPFLDEDVIRTLLDIPLW 119
           TKYR GSW+ L +EMKLDMQRIWKRN+GRDDRCIADNGKE RFPFLDEDVI+TLLDIPLW
Sbjct: 478 TKYRNGSWVALDQEMKLDMQRIWKRNLGRDDRCIADNGKEGRFPFLDEDVIKTLLDIPLW 537

Query: 120 KVANLNQPSGTGDKKILREVAWMLGLHEAAILPKRAIQFGSRIARESNRKNFGSNRAANQ 179
           ++A+L QPSGTGDKKILR+VA +LG+HE A +PKRAIQFGSRIARESNRKNFGSNRAANQ
Sbjct: 538 EIADLEQPSGTGDKKILRQVASLLGVHEVAKMPKRAIQFGSRIARESNRKNFGSNRAANQ 597

Query: 180 ASAGSV 185
           ASAGSV
Sbjct: 598 ASAGSV 603