Jatropha Genome Database
- JcCA0288941.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0288941.10 + phase: 0 /pseudo/partial
(390 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G26340.1 | Symbols: | F-box family protein | chr4:13324130-1... 133 2e-31
AT2G42730.1 | Symbols: | F-box family protein | chr2:17787454-1... 130 1e-30
AT3G59200.1 | Symbols: | F-box family protein | chr3:21887484-2... 120 2e-27
AT4G14096.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 116 2e-26
AT4G14103.1 | Symbols: | F-box family protein | chr4:8126948-81... 116 3e-26
AT3G52680.2 | Symbols: | F-box family protein | chr3:19527075-1... 114 8e-26
AT3G52680.1 | Symbols: | F-box family protein | chr3:19527075-1... 114 8e-26
AT4G10400.2 | Symbols: | F-box family protein | chr4:6446335-64... 113 2e-25
AT4G10400.1 | Symbols: | F-box family protein | chr4:6446335-64... 113 2e-25
AT3G50710.1 | Symbols: | F-box family protein | chr3:18845199-1... 111 7e-25
AT5G22730.1 | Symbols: | F-box family protein | chr5:7551632-75... 109 4e-24
AT5G38590.2 | Symbols: | F-box family protein | chr5:15452066-1... 108 5e-24
AT1G55030.1 | Symbols: | F-box family protein | chr1:20530417-2... 108 5e-24
AT4G00160.1 | Symbols: | F-box family protein | chr4:63465-6536... 107 9e-24
AT4G00315.1 | Symbols: | F-box family protein | chr4:137404-138... 106 2e-23
AT3G59190.1 | Symbols: | F-box family protein | chr3:21884740-2... 105 6e-23
AT1G58310.1 | Symbols: | F-box family protein | chr1:21631947-2... 104 8e-23
AT5G56440.1 | Symbols: | F-box family protein | chr5:22855742-2... 103 1e-22
AT1G78750.1 | Symbols: | F-box family protein | chr1:29613122-2... 102 3e-22
AT5G56420.2 | Symbols: | F-box family protein | chr5:22850863-2... 102 5e-22
AT5G56420.1 | Symbols: | F-box family protein | chr5:22850863-2... 102 5e-22
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 100 2e-21
AT3G58860.1 | Symbols: | F-box family protein | chr3:21763742-2... 100 3e-21
AT5G56400.1 | Symbols: | F-box family protein | chr5:22846069-2... 99 4e-21
AT3G26922.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 99 4e-21
AT5G38590.1 | Symbols: | F-box family protein | chr5:15452586-1... 99 5e-21
AT1G06630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 97 2e-20
AT1G06630.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 97 2e-20
AT1G06630.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 96 3e-20
AT3G42770.1 | Symbols: | F-box family protein | chr3:14867122-1... 96 4e-20
AT5G41840.1 | Symbols: | F-box family protein | chr5:16754436-1... 96 4e-20
AT3G58880.1 | Symbols: | F-box family protein | chr3:21768485-2... 96 4e-20
AT5G56410.1 | Symbols: | F-box family protein | chr5:22848508-2... 96 6e-20
AT3G59210.1 | Symbols: | F-box family protein | chr3:21889942-2... 96 6e-20
AT4G09920.1 | Symbols: | F-box family protein | chr4:6224691-62... 95 6e-20
AT4G15060.1 | Symbols: | F-box protein-related | chr4:8599035-8... 95 8e-20
AT5G22660.2 | Symbols: | F-box family protein | chr5:7536328-75... 95 9e-20
AT3G44060.1 | Symbols: | F-box family protein | chr3:15824938-1... 95 1e-19
AT3G59230.1 | Symbols: | F-box family protein | chr3:21896052-2... 94 1e-19
AT5G56810.1 | Symbols: | F-box family protein | chr5:22974520-2... 94 1e-19
AT5G38396.1 | Symbols: | F-box family protein | chr5:15373094-1... 94 2e-19
AT5G41630.1 | Symbols: | F-box family protein | chr5:16650282-1... 93 3e-19
AT1G32375.1 | Symbols: | F-box family protein | chr1:11679230-1... 92 4e-19
AT1G51370.1 | Symbols: | F-box family protein | chr1:19045615-1... 92 5e-19
AT3G44810.1 | Symbols: | F-box family protein | chr3:16358496-1... 92 7e-19
AT5G50270.1 | Symbols: | F-box family protein | chr5:20457487-2... 92 8e-19
AT5G56370.2 | Symbols: | F-box family protein | chr5:22836200-2... 91 8e-19
AT5G56370.1 | Symbols: | F-box family protein | chr5:22836200-2... 91 8e-19
AT1G55660.1 | Symbols: | F-box family protein | chr1:20800694-2... 91 9e-19
AT3G03360.1 | Symbols: | F-box family protein | chr3:795218-796... 91 1e-18
AT5G18780.1 | Symbols: | F-box family protein | chr5:6264610-62... 91 2e-18
AT2G26860.2 | Symbols: | F-box family protein | chr2:11452421-1... 91 2e-18
AT2G26860.1 | Symbols: | F-box family protein | chr2:11452196-1... 91 2e-18
AT1G66290.1 | Symbols: | F-box family protein | chr1:24713306-2... 90 2e-18
AT3G51530.1 | Symbols: | F-box family protein | chr3:19112873-1... 90 2e-18
AT4G00320.1 | Symbols: | F-box family protein | chr4:139939-141... 90 3e-18
AT2G04230.1 | Symbols: | F-box family protein | chr2:1447025-14... 89 3e-18
AT1G78760.1 | Symbols: | F-box family protein | chr1:29615174-2... 89 6e-18
AT5G60610.1 | Symbols: | F-box family protein | chr5:24364049-2... 89 6e-18
AT5G62970.1 | Symbols: | F-box family protein | chr5:25272033-2... 88 1e-17
AT1G51370.2 | Symbols: | F-box family protein | chr1:19045615-1... 88 1e-17
AT3G58930.1 | Symbols: | F-box family protein | chr3:21778381-2... 87 1e-17
AT1G16930.1 | Symbols: | F-box family protein | chr1:5789987-57... 87 1e-17
AT1G66300.1 | Symbols: | F-box family protein | chr1:24716497-2... 87 1e-17
AT3G28410.1 | Symbols: | F-box family protein | chr3:10640152-1... 87 2e-17
AT4G27050.4 | Symbols: | F-box family protein | chr4:13575884-1... 86 5e-17
AT4G27050.3 | Symbols: | F-box family protein | chr4:13575884-1... 86 5e-17
AT4G27050.2 | Symbols: | F-box family protein | chr4:13575884-1... 86 5e-17
AT4G27050.1 | Symbols: | F-box family protein | chr4:13575884-1... 86 5e-17
AT3G44090.1 | Symbols: | F-box family protein | chr3:15839123-1... 85 7e-17
AT5G53840.1 | Symbols: | F-box family protein (FBL13) | chr5:21... 85 7e-17
AT5G22670.1 | Symbols: | F-box family protein | chr5:7538192-75... 85 9e-17
AT5G22660.1 | Symbols: | F-box family protein | chr5:7536906-75... 85 9e-17
AT5G27750.1 | Symbols: | F-box family protein | chr5:9828430-98... 84 1e-16
AT3G49020.1 | Symbols: | F-box family protein | chr3:18169079-1... 84 1e-16
AT3G52670.1 | Symbols: | F-box family protein | chr3:19525247-1... 84 2e-16
AT1G13570.1 | Symbols: | F-box family protein | chr1:4642528-46... 84 2e-16
AT3G49040.1 | Symbols: | F-box family protein | chr3:18177676-1... 83 4e-16
AT3G49030.1 | Symbols: | F-box family protein | chr3:18173138-1... 82 4e-16
AT5G02700.1 | Symbols: | F-box family protein | chr5:609381-611... 82 4e-16
AT5G56380.1 | Symbols: | F-box family protein | chr5:22838836-2... 82 5e-16
AT5G22720.1 | Symbols: | F-box family protein | chr5:7549565-75... 82 5e-16
AT1G66310.1 | Symbols: | F-box family protein | chr1:24722971-2... 82 6e-16
AT5G22610.1 | Symbols: | F-box family protein | chr5:7515217-75... 82 6e-16
AT3G58940.1 | Symbols: | F-box family protein | chr3:21781002-2... 81 1e-15
AT4G10420.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 81 1e-15
AT3G59240.1 | Symbols: | F-box family protein | chr3:21898682-2... 81 1e-15
AT3G03040.1 | Symbols: | F-box family protein | chr3:684685-686... 80 2e-15
AT2G29930.3 | Symbols: | F-box family protein | chr2:12756457-1... 80 2e-15
AT2G29930.1 | Symbols: | F-box family protein | chr2:12756457-1... 80 2e-15
AT4G22280.1 | Symbols: | F-box family protein | chr4:11776054-1... 79 4e-15
AT5G52460.1 | Symbols: EDA41 | EDA41 (embryo sac development arr... 79 5e-15
AT5G56390.1 | Symbols: | F-box family protein | chr5:22842790-2... 79 5e-15
AT1G52650.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 79 5e-15
AT5G53640.1 | Symbols: | F-box family protein | chr5:21785999-2... 79 6e-15
AT1G80470.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 79 6e-15
AT3G58980.1 | Symbols: | F-box family protein | chr3:21794445-2... 79 7e-15
AT1G19410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 78 1e-14
AT1G21990.1 | Symbols: | F-box family protein | chr1:7740530-77... 78 1e-14
AT5G35995.2 | Symbols: | F-box family protein | chr5:14136707-1... 78 1e-14
AT5G35995.1 | Symbols: | F-box family protein | chr5:14136707-1... 78 1e-14
AT3G58960.1 | Symbols: | F-box family protein | chr3:21787146-2... 78 1e-14
AT1G48400.1 | Symbols: | F-box family protein | chr1:17882136-1... 77 1e-14
AT5G56820.1 | Symbols: | F-box family protein | chr5:22976334-2... 77 2e-14
AT1G69630.1 | Symbols: | F-box family protein | chr1:26191640-2... 77 2e-14
AT2G29910.2 | Symbols: | F-box family protein | chr2:12751823-1... 77 3e-14
AT1G13780.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 77 3e-14
AT1G78730.1 | Symbols: | F-box family protein | chr1:29607840-2... 76 3e-14
AT2G29910.1 | Symbols: | F-box family protein | chr2:12751686-1... 76 4e-14
AT4G26350.1 | Symbols: | F-box family protein | chr4:13326853-1... 75 6e-14
AT5G56560.1 | Symbols: | F-box family protein | chr5:22899724-2... 75 7e-14
AT3G03030.1 | Symbols: | F-box family protein | chr3:682252-683... 75 7e-14
AT3G18150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 75 7e-14
AT3G59000.1 | Symbols: | F-box family protein | chr3:21799757-2... 75 8e-14
AT5G56690.1 | Symbols: | F-box family protein | chr5:22939723-2... 75 8e-14
AT5G38390.1 | Symbols: | F-box family protein | chr5:15366432-1... 75 9e-14
AT3G58920.1 | Symbols: | F-box family protein | chr3:21776293-2... 75 9e-14
AT2G42720.1 | Symbols: | F-box family protein | chr2:17785653-1... 75 1e-13
AT5G38570.1 | Symbols: | F-box family protein | chr5:15449279-1... 74 1e-13
AT5G44490.1 | Symbols: | F-box family protein | chr5:17924035-1... 74 2e-13
AT5G56700.1 | Symbols: | F-box protein-related | chr5:22941991-... 73 3e-13
AT4G22280.2 | Symbols: | F-box family protein | chr4:11776368-1... 73 3e-13
AT5G44950.1 | Symbols: | F-box family protein | chr5:18151665-1... 73 3e-13
AT5G03100.1 | Symbols: | F-box family protein | chr5:726832-727... 73 3e-13
AT5G25850.1 | Symbols: | F-box family protein | chr5:9014082-90... 72 5e-13
AT1G22000.1 | Symbols: | F-box family protein | chr1:7744189-77... 71 1e-12
AT2G26030.3 | Symbols: | F-box family protein | chr2:11091505-1... 71 1e-12
AT2G26030.1 | Symbols: | F-box family protein | chr2:11091505-1... 71 1e-12
AT1G05080.1 | Symbols: | F-box family protein | chr1:1459091-14... 71 1e-12
AT3G59150.1 | Symbols: | F-box family protein | chr3:21872729-2... 70 2e-12
AT1G64540.1 | Symbols: | F-box family protein | chr1:23966909-2... 70 2e-12
AT3G26920.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 3e-12
AT3G58900.3 | Symbols: | F-box family protein | chr3:21773030-2... 70 3e-12
AT3G58900.2 | Symbols: | F-box family protein | chr3:21773030-2... 70 3e-12
AT3G58900.1 | Symbols: | F-box family protein | chr3:21773030-2... 70 3e-12
AT1G78840.1 | Symbols: | F-box family protein | chr1:29639290-2... 70 3e-12
AT3G59250.1 | Symbols: | F-box family protein | chr3:21901726-2... 69 4e-12
AT5G44940.1 | Symbols: | F-box family protein | chr5:18149369-1... 69 4e-12
AT3G44080.1 | Symbols: | F-box family protein | chr3:15835632-1... 69 4e-12
AT4G13960.1 | Symbols: | F-box family protein | chr4:8060681-80... 69 5e-12
AT1G66320.1 | Symbols: | F-box family protein | chr1:24727041-2... 69 6e-12
AT4G13985.1 | Symbols: FBD1 | FBD1 (FBD-ASSOCIATED F-BOX PROTEIN... 68 8e-12
AT3G49150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 8e-12
AT4G10410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 8e-12
AT3G59170.1 | Symbols: | F-box family protein | chr3:21878167-2... 67 2e-11
AT5G02930.1 | Symbols: | F-box family protein | chr5:682577-684... 67 2e-11
AT4G13965.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 2e-11
AT3G59160.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 3e-11
AT1G60400.1 | Symbols: | F-box family protein | chr1:22254405-2... 66 4e-11
AT5G44960.1 | Symbols: | F-box family protein | chr5:18153852-1... 65 8e-11
AT3G56780.1 | Symbols: | F-box family protein | chr3:21031613-2... 65 1e-10
AT1G16940.1 | Symbols: | F-box family protein | chr1:5791983-57... 65 1e-10
AT5G44980.1 | Symbols: | F-box family protein | chr5:18160600-1... 64 2e-10
AT3G10750.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT3G54910.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT3G54910.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT3G54910.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT3G59000.2 | Symbols: | F-box family protein | chr3:21799757-2... 63 2e-10
AT5G38386.1 | Symbols: | F-box family protein | chr5:15363178-1... 62 5e-10
AT5G56800.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 8e-10
AT5G18770.1 | Symbols: | F-box family protein | chr5:6261426-62... 62 9e-10
AT5G22700.1 | Symbols: | F-box family protein | chr5:7545653-75... 61 1e-09
AT5G25860.1 | Symbols: | F-box family protein | chr5:9016908-90... 60 2e-09
AT5G11370.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 2e-09
AT5G02920.1 | Symbols: | ubiquitin-protein ligase | chr5:680541... 60 3e-09
AT1G49610.1 | Symbols: | F-box family protein | chr1:18361679-1... 59 4e-09
AT1G32020.1 | Symbols: | F-box family protein | chr1:11512552-1... 59 6e-09
AT3G29830.1 | Symbols: | F-box family protein | chr3:11737049-1... 59 7e-09
AT1G60410.1 | Symbols: | F-box family protein | chr1:22259129-2... 57 2e-08
AT3G59180.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 5e-08
AT5G02910.1 | Symbols: | F-box family protein | chr5:677120-678... 56 5e-08
AT5G38565.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 6e-08
AT1G56610.1 | Symbols: | syntaxin-related family protein | chr1... 55 7e-08
AT5G40050.1 | Symbols: | F-box family protein | chr5:16032083-1... 55 7e-08
AT1G56610.2 | Symbols: | syntaxin-related family protein | chr1... 55 9e-08
AT1G80960.1 | Symbols: | F-box protein-related | chr1:30416065-... 55 9e-08
AT1G80960.2 | Symbols: | F-box protein-related | chr1:30416065-... 55 9e-08
AT1G80960.3 | Symbols: | F-box protein-related | chr1:30416065-... 55 1e-07
AT5G54820.1 | Symbols: | F-box family protein | chr5:22269859-2... 55 1e-07
AT5G15620.1 | Symbols: | F-box family protein | chr5:5082465-50... 54 1e-07
AT1G61330.1 | Symbols: | F-box family protein | chr1:22622975-2... 54 2e-07
AT3G58950.1 | Symbols: | F-box family protein | chr3:21784116-2... 54 2e-07
AT3G52690.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 3e-07
AT1G47915.1 | Symbols: | F-box family protein | chr1:17660752-1... 52 5e-07
AT3G26930.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 7e-07
AT1G10780.1 | Symbols: | F-box family protein | chr1:3592875-35... 52 7e-07
AT3G58820.1 | Symbols: | F-box family protein | chr3:21752960-2... 52 8e-07
AT2G39415.1 | Symbols: | F-box family protein | chr2:16458607-1... 52 8e-07
AT3G60790.1 | Symbols: | F-box protein-related | chr3:22464623-... 52 9e-07
AT3G62430.1 | Symbols: | F-box family protein | chr3:23093795-2... 51 2e-06
AT4G03220.1 | Symbols: | F-box family protein | chr4:1417472-14... 50 2e-06
AT1G67390.1 | Symbols: | F-box family protein | chr1:25244690-2... 50 2e-06
AT5G56430.1 | Symbols: | F-box family protein | chr5:22853323-2... 49 7e-06
>AT4G26340.1 | Symbols: | F-box family protein |
chr4:13324130-13325559 FORWARD
Length = 419
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 194/410 (47%), Gaps = 62/410 (15%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS L DD+L ILSF+P KDV+ TS LSKRW+ LW+ VS+L++ + S T +
Sbjct: 2 DRISQLSDDLLLQILSFIPGKDVVATSLLSKRWQSLWMLVSELEYDD-------SYHTGD 54
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLE--PRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+ SF + V +LL I+ L L P P + +W+ AL ++ +
Sbjct: 55 YK-SFSQFVYRSLLSNNAPVIKHLHLNLGPDCP---------AIDIGLWIGFALTRRLRQ 104
Query: 123 LNLSL----HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEG 178
L +++ ++ F LP L+ S +L L+L + +L VP S+C LK LHLK + +E
Sbjct: 105 LKINIRTSSNDASFSLPSSLYTSDTLETLRLINFVLLDVPSSVCLPSLKVLHLKTVDYED 164
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTL-IIDYDCSYPDDFLDCVVEI 237
+ S L GCP LE+L + ++ +PSLR L +ID + D ++ I
Sbjct: 165 DASLPSLLFGCPNLEELFVERHDQDLEMDVTFVVPSLRRLSMIDKNYGQCDRYV-----I 219
Query: 238 SAVNLTSLNCTNYLIFEL-SLCNLSSLVYAYVDV------QLFGALHNLKLLYVL*NCLV 290
+L LN T+ ++++ + N+ LV A+VD+ + AL +++ L + CL
Sbjct: 220 DVPSLKYLNITDDAVYDVRQIENMPELVEAHVDITQGVTHKFLRALTSVRQLSL---CLS 276
Query: 291 DFRV*NP--------LH----------FRIIPLSLQKSPNLESLNFF--EFDPNICFIGE 330
V P +H + ++ LQ SP L+SL + + +C I
Sbjct: 277 LSEVMCPSGIIFSQLVHLNLSTVVKGWWDLLTSMLQDSPKLQSLKLIDKQHESGLCGIET 336
Query: 331 G---GISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTR 377
+ S+VP C L+ F + G + + Y+L+NA L +
Sbjct: 337 PIGWKLPSSVPECLLFSLEAFEWIGYKGRRGDREVATYVLKNAACLRTAK 386
>AT2G42730.1 | Symbols: | F-box family protein |
chr2:17787454-17791218 REVERSE
Length = 737
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 203/436 (46%), Gaps = 74/436 (16%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
KD+IS LPD++LG ILS + TK+ + TS LSKRWK++++ VS+LD ++ T +
Sbjct: 3 AKDVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQNR 62
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+E+ +++ VD L + I+KL L+ + + G + S R+ W+C L + +
Sbjct: 63 IEIHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSS---RIQSWICNVLDHGVMD 119
Query: 123 LN--LSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
L+ ++L +P +F SK+L KL++ +++ + L+TL L + F G
Sbjct: 120 LDVFITLKGKSPPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLPLLRTLCLDSVNFVGGH 179
Query: 181 ST-QQLFLGCPVLEKLILYN---CGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVE 236
+ L CPVLE+L++ W S++ PSL+ L I +D + LD
Sbjct: 180 NVVGTLISRCPVLEELVVEERRCVDWT----CSVSSPSLKRLHIRFDRKFTSISLD---- 231
Query: 237 ISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL------------FGAL-------- 276
A NL + Y++ + L SL+ A +++++ G++
Sbjct: 232 --APNLIYYKHSGYVLGKYPNVKLDSLIEARLNLRMDETRMVGVRNGSLGSIPADMRNLI 289
Query: 277 -------------HNLKLLYV------L*NCLVDFRV*N--PLHFRIIPLSLQKSPNLES 315
H L+LLY L + LV + N ++++PL ++ SPNLE+
Sbjct: 290 NGIRNVRILHLSSHTLELLYFSCKEMPLFDSLVSLSIGNDKARGWQMLPLLIKNSPNLET 349
Query: 316 LNFFEFDPNI---------CFIGEGGISSNVPHCF-KHRLKTFFISNFSGNAAEIHLMRY 365
L F D I C+ + I+S C ++K I ++ G E++ M++
Sbjct: 350 LIFMGLDHYITNRCGDVCVCYDTDESITS----CLSSSQVKVLEILSYQGTTRELNQMKH 405
Query: 366 LLENATVLERTRIVCV 381
LE LE +I V
Sbjct: 406 FLEKLPCLELVKICVV 421
>AT3G59200.1 | Symbols: | F-box family protein |
chr3:21887484-21889214 FORWARD
Length = 520
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 146/274 (53%), Gaps = 15/274 (5%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
+D IS+LP+ ++ ILSFLPTK+ TS LSK+W++L+ V++LDF + + K
Sbjct: 5 SRDRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSD 64
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
VE+ SF++ VD L + + K LE S + V + RVT W+ L + +
Sbjct: 65 VELSRSFMEFVDRVLALQGNGSVNKFSLE----CSNYDVD--LARVTGWILNVLGRGVSE 118
Query: 123 LNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVP---GSICFSCLKTLHLKYITF-EG 178
L+LS+ E + LP +F SK+L +LKL L + + LKTL++ + E
Sbjct: 119 LDLSILE--YPLPSEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTLYIDCVDVQER 176
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEIS 238
+ +L GCPVLE+L+L N GW+N + S+++ +L+ L + +Y + V
Sbjct: 177 GFGFVKLLSGCPVLEELVLMNIGWENWKFCSVSVKTLKRLTFFCEETYEN---PKSVSFD 233
Query: 239 AVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL 272
NL L ++ + + N +SLV A++ ++L
Sbjct: 234 TPNLVYLEYSDAIASKYPKVNFNSLVEAHIGLRL 267
>AT4G14096.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT4G14103.1); Has
1300 Blast hits to 1271 proteins in 9 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1300;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr4:8124606-8126202 FORWARD
Length = 468
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 139/278 (50%), Gaps = 23/278 (8%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+DIIS+LP+ I ILSFLPTK+ TS LSK+W++L+ V +LD + N +
Sbjct: 7 RDIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLN--PENET 64
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMF----RVTMWVCAALKNK 119
EV SF+ VD R L L+ PL FS+K R+ W+ L+
Sbjct: 65 EVSSSFMDFVD-----------RVLALQGNSPLHKFSLKIGDGVEPDRIIPWINNVLERG 113
Query: 120 IEKLNLSLH-EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEG 178
+ L+L ++ E F+ P +F SK+L +LKL +Y +L + LKTL++ FE
Sbjct: 114 VSDLDLHVYMETEFVFPSEMFLSKTLVRLKLMLYPLLEFE-DVYLPKLKTLYIDSCYFEK 172
Query: 179 EW-STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEI 237
+L GCP+LE L+L + W S+++P+L+ L + D+F V I
Sbjct: 173 YGIGLTKLLSGCPILEDLVLDDIPWCTWDFASVSVPTLKRLT--FSTQVRDEFPKS-VSI 229
Query: 238 SAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGA 275
NL L T+ + + N SLV A++D++L
Sbjct: 230 DTPNLVYLKFTDTVAGKYPKVNFDSLVEAHIDLRLLQG 267
>AT4G14103.1 | Symbols: | F-box family protein |
chr4:8126948-8128305 FORWARD
Length = 381
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 144/282 (51%), Gaps = 25/282 (8%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
+D+IS+LPDDI ILSFLPTK+ TS LSK+W++L+ V +LD + + N +
Sbjct: 6 SRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLN--PENE 63
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSW----MFRVTMWVCAALKN 118
E+ SF+ VD R L L+ PL FS+K R+ W+ L+
Sbjct: 64 TEISTSFMDFVD-----------RVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLER 112
Query: 119 KIEKLNLSLH-EVIFILPDCLFASKSLC--KLKLTMYCVLRVPGSICFSCLKTLHLKYIT 175
+ L+L L+ E F+LP ++ K+L KL+ +Y + V + LKTL+++
Sbjct: 113 GVSDLDLHLNLESEFLLPSQVYLCKTLVWLKLRFGLYPTIDV-EDVHLPKLKTLYIEATH 171
Query: 176 FEGEW-STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCV 234
FE +L GCP+LE L+L + W S+++P+L+ L + D+F V
Sbjct: 172 FEEHGVGLTKLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQER--DEFPKSV 229
Query: 235 VEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGAL 276
+ + NL L T+ + + NL SLV A++D++L L
Sbjct: 230 L-LDTPNLVYLKFTDTVAGKYPKVNLDSLVEAHIDLRLLKPL 270
>AT3G52680.2 | Symbols: | F-box family protein |
chr3:19527075-19528838 FORWARD
Length = 456
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 177/414 (42%), Gaps = 67/414 (16%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
GKD IS LPD +L ILS LPT V+ TS LSK+W+ LW V +L+F S
Sbjct: 19 GKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFD--------SDDY 70
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
Y+F ++V + L + + RL+ F+ + +WV A + +
Sbjct: 71 ESEHYTFSEIVCKSFLSHKAPVLESFRLK----FVNFNP----VDIGLWVGIAFSRHLRE 122
Query: 123 LNLSLHE------VIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITF 176
L L + V F P L +L LKL + ++ +P + L+TLHL+++ +
Sbjct: 123 LVLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRY 182
Query: 177 EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPD-------- 228
+ E S + L GCP LE+L LY +I+ +I +PSL+ L I + P+
Sbjct: 183 KDESSVRNLLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINA 242
Query: 229 --------DFLDC---------VVEISAVNLTSLNCTNYLIFELS----LCNLSSLVYAY 267
+ L C +VE + +TS+ +L S L NLS L Y
Sbjct: 243 PFLKYLLIEELRCPEFCLNAPELVEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLKITY 302
Query: 268 VDVQLFGALHNLKLLYVL*NCLVDFRV*NPLHFRIIPLSLQKSPNLESLNFFE----FDP 323
+F L +L++ + ++ L L+ SP L+ L + F
Sbjct: 303 PTGSMFYQLVSLEMYTR-----------EAEWWNLLTLMLENSPKLQVLKLTDRSQNFHK 351
Query: 324 NICFIGEGGISSNVPHCFKHRLKTFFISNFS-GNAAEIHLMRYLLENATVLERT 376
+ G+ +VP C +L+TF F G E + Y+L+N L++
Sbjct: 352 DGLVSGKWNEPKDVPECLLSQLETFVWRRFDWGREEEKEIATYILKNGRRLKKA 405
>AT3G52680.1 | Symbols: | F-box family protein |
chr3:19527075-19528838 FORWARD
Length = 456
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 177/414 (42%), Gaps = 67/414 (16%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
GKD IS LPD +L ILS LPT V+ TS LSK+W+ LW V +L+F S
Sbjct: 19 GKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFD--------SDDY 70
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
Y+F ++V + L + + RL+ F+ + +WV A + +
Sbjct: 71 ESEHYTFSEIVCKSFLSHKAPVLESFRLK----FVNFNP----VDIGLWVGIAFSRHLRE 122
Query: 123 LNLSLHE------VIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITF 176
L L + V F P L +L LKL + ++ +P + L+TLHL+++ +
Sbjct: 123 LVLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRY 182
Query: 177 EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPD-------- 228
+ E S + L GCP LE+L LY +I+ +I +PSL+ L I + P+
Sbjct: 183 KDESSVRNLLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINA 242
Query: 229 --------DFLDC---------VVEISAVNLTSLNCTNYLIFELS----LCNLSSLVYAY 267
+ L C +VE + +TS+ +L S L NLS L Y
Sbjct: 243 PFLKYLLIEELRCPEFCLNAPELVEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLKITY 302
Query: 268 VDVQLFGALHNLKLLYVL*NCLVDFRV*NPLHFRIIPLSLQKSPNLESLNFFE----FDP 323
+F L +L++ + ++ L L+ SP L+ L + F
Sbjct: 303 PTGSMFYQLVSLEMYTR-----------EAEWWNLLTLMLENSPKLQVLKLTDRSQNFHK 351
Query: 324 NICFIGEGGISSNVPHCFKHRLKTFFISNFS-GNAAEIHLMRYLLENATVLERT 376
+ G+ +VP C +L+TF F G E + Y+L+N L++
Sbjct: 352 DGLVSGKWNEPKDVPECLLSQLETFVWRRFDWGREEEKEIATYILKNGRRLKKA 405
>AT4G10400.2 | Symbols: | F-box family protein |
chr4:6446335-6447715 REVERSE
Length = 409
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 176/388 (45%), Gaps = 41/388 (10%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS LPD++L ILSF+PTK + TS LSKRW+ LW+ ++ L F SK+ E
Sbjct: 2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKF--------GSKRYSE 53
Query: 65 VRYSFLK-LVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
+ L+ +D L I RL LS K R MWV A+ I +L
Sbjct: 54 SEFKRLQCFLDRNLPLHRAPVIESFRL----VLSDSHFKPEDIR--MWVVVAVSRYIREL 107
Query: 124 NL-SLH--EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
+ S H E ILP L+ KSL LKL +L VP +C LKTL LK + + +
Sbjct: 108 KIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQG 167
Query: 181 STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAV 240
S Q+L CPVLE L++ N+ ++++ +PSL+ L + S +F+ + +
Sbjct: 168 SLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSLSTPSSR--EFVIDTPSLLSF 225
Query: 241 NLTSLNCTNYLIFELSLCNLSSLVYAYVDV------QLFGALHNLKLLYV---------- 284
L N ++ + N+ L AY++V L G++ ++K L +
Sbjct: 226 QLVDRNDNSHTFL---IENMPKLREAYINVPFADIKSLIGSITSVKRLAISSEVGYGEGF 282
Query: 285 L*NCLVDFRV*NPLHFRIIPLSLQKSPNLESLNFFEFDPNICFIG--EGGISSNVPHCFK 342
+ N L + + N ++ L+ SPNL L + +G S VP C
Sbjct: 283 IFNHLEELTLWNKYSSNLLVWFLKNSPNLRELMLVSETDDHENLGMLSWNQPSIVPECML 342
Query: 343 HRLKTFFISNFSGNAAEIHLMRYLLENA 370
L+ F + G + + Y+L+NA
Sbjct: 343 SSLQKFTWFKYLGRPQDRDIAVYILKNA 370
>AT4G10400.1 | Symbols: | F-box family protein |
chr4:6446335-6447715 REVERSE
Length = 409
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 176/388 (45%), Gaps = 41/388 (10%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS LPD++L ILSF+PTK + TS LSKRW+ LW+ ++ L F SK+ E
Sbjct: 2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKF--------GSKRYSE 53
Query: 65 VRYSFLK-LVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
+ L+ +D L I RL LS K R MWV A+ I +L
Sbjct: 54 SEFKRLQCFLDRNLPLHRAPVIESFRL----VLSDSHFKPEDIR--MWVVVAVSRYIREL 107
Query: 124 NL-SLH--EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
+ S H E ILP L+ KSL LKL +L VP +C LKTL LK + + +
Sbjct: 108 KIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQG 167
Query: 181 STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAV 240
S Q+L CPVLE L++ N+ ++++ +PSL+ L + S +F+ + +
Sbjct: 168 SLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSLSTPSSR--EFVIDTPSLLSF 225
Query: 241 NLTSLNCTNYLIFELSLCNLSSLVYAYVDV------QLFGALHNLKLLYV---------- 284
L N ++ + N+ L AY++V L G++ ++K L +
Sbjct: 226 QLVDRNDNSHTFL---IENMPKLREAYINVPFADIKSLIGSITSVKRLAISSEVGYGEGF 282
Query: 285 L*NCLVDFRV*NPLHFRIIPLSLQKSPNLESLNFFEFDPNICFIG--EGGISSNVPHCFK 342
+ N L + + N ++ L+ SPNL L + +G S VP C
Sbjct: 283 IFNHLEELTLWNKYSSNLLVWFLKNSPNLRELMLVSETDDHENLGMLSWNQPSIVPECML 342
Query: 343 HRLKTFFISNFSGNAAEIHLMRYLLENA 370
L+ F + G + + Y+L+NA
Sbjct: 343 SSLQKFTWFKYLGRPQDRDIAVYILKNA 370
>AT3G50710.1 | Symbols: | F-box family protein |
chr3:18845199-18846673 REVERSE
Length = 427
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 193/432 (44%), Gaps = 75/432 (17%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D ISNL DD+L I+S LPTKDV+ T LSKRWK LW+ V L F ++ +E
Sbjct: 2 DRISNLSDDLLLKIVSSLPTKDVVVTMLLSKRWKFLWMMVPKLRFDDEF--------ELE 53
Query: 65 VRY--SFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
Y FLK VD +++ + ++ S + +W+ R+ M ++N + +
Sbjct: 54 PSYYGRFLKYVDKSMVLNRAQVLETVKFNVGPCCSSEDIATWI-RIGM-----VRN-MRE 106
Query: 123 LNLSLHEVIF------ILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITF 176
L +S E F LP L+ + L LKL VL VP +CF LK+LHL + +
Sbjct: 107 LEISHCEGYFREHRSIKLPKSLYTYEKLEVLKLASTVVLNVPIDVCFPSLKSLHLVCVEY 166
Query: 177 EGEWSTQQLFLGCPVLEKLIL---YNCGWKNIRRISIAIPSLRTL-IIDYDCSYPDDFLD 232
+ + S ++L GCPVLE+L+L YN ++R + IP+L++L I+D DF
Sbjct: 167 KTKKSHRRLLSGCPVLEELVLDKSYNSF--HVRSFYVEIPTLQSLSILDTSGELYGDF-- 222
Query: 233 CVVEISAVNLTSLNCTNYLIFELSLC---NLSSLVYAYVDV------QLFGALHNLKLLY 283
VN +L N++ F LC N+ +V + V +L G L ++K L
Sbjct: 223 ----TFVVNAPALKYFNFVDFYGDLCLRDNMPEVVDVNIKVIYRNPKKLLGPLKSVKRLS 278
Query: 284 VL*NCLV-DFRV*NPLHF----------------RIIPLSLQKSPNLESLNFFE------ 320
+ CL + N + F ++ LQ SP L+ L +E
Sbjct: 279 L---CLSPSTTLHNHMEFYQLVHLELCGDALMWWDLLTWMLQSSPKLQVLKIYECKCEEH 335
Query: 321 --FDPNICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
D I E S+VP C L F ++ E ++ Y+L+NA L+
Sbjct: 336 DYLDDPIEEHWEE--PSSVPQCLLFHLNIFEWKYYNAGDEEKKVVAYILKNARQLKTATF 393
Query: 379 VCVQ-MYQKTRR 389
+Y K R
Sbjct: 394 SAASYLYPKEER 405
>AT5G22730.1 | Symbols: | F-box family protein |
chr5:7551632-7553219 REVERSE
Length = 466
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 190/429 (44%), Gaps = 79/429 (18%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
G+D+IS LPD ++ IL +LP KD++RTS+LS RWK LW+ + LD + +
Sbjct: 26 GEDLISKLPDSLITQILLYLPIKDIVRTSSLSSRWKSLWLLIPRLDLDS---------EE 76
Query: 63 VEVRYSFLKLVDSALLF--REPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
+ +F+ ++ + F E C+ KL+L R ++ VT W+ ++ K+
Sbjct: 77 FQDYNAFVGFMNKFIDFSGEEKICLDKLKLSSRKTVNDLPC------VTRWIDFVVRRKL 130
Query: 121 EKLN---LSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFE 177
+ L+ L + + +P L+ +L L+L + + ++ CLKT+ L+ +
Sbjct: 131 KHLDVECLVNRKFLEEMPLSLYVCDTLVNLRLHRVLLGKFE-AVSLPCLKTMRLEENVYA 189
Query: 178 GEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCV--- 234
+ + L CPVL+ LI+ N++ + + +L +L ID++ DDF+D
Sbjct: 190 NDVVLESLISSCPVLKDLIILRMFEDNVKVLRVHSLTLTSLNIDFNFGEGDDFVDGFDKK 249
Query: 235 ---VEISAVNLTSLNCTNYLIFELSLCNLSSL-----VYAY--------VDVQLFGALHN 278
V I A L L + L + N SL VY + VD+ + N
Sbjct: 250 VSGVLIDAPRLKYLKFQDDLSGSKIITNSGSLAKVNVVYVFNENDCADVVDIPRRNMVRN 309
Query: 279 ----------LKLLYVL*NCLVDFRV*NPL----------------HFRIIPLSLQKSPN 312
+K+ L ++ +PL I+P L+ PN
Sbjct: 310 FLTSISGVSDMKISQHFVEFLYYYKDFDPLPQFCNLSRLKAEISLYFLEILPTILESCPN 369
Query: 313 LES----LNFF--EFDPNICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYL 366
L+S L F+ E D I F S+VP C L++ I F+G A++ + RY
Sbjct: 370 LKSLVMVLEFYLQEEDEPIIF-------SSVPRCLVSSLESVEIKKFNGRPAKMEVARYF 422
Query: 367 LENATVLER 375
LEN+ VL++
Sbjct: 423 LENSGVLQK 431
>AT5G38590.2 | Symbols: | F-box family protein |
chr5:15452066-15453455 REVERSE
Length = 410
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 188/403 (46%), Gaps = 46/403 (11%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D I+ LPDD+L ILS++PT + TS LSKRW+ LW+ + +LD+ ++ C V
Sbjct: 2 DKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTSRW---CRKPGDVG 58
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
+R K + L R P I LR P +K R W+ A+ + L+
Sbjct: 59 LRDFIHK---NLPLHRAP-VIESLRFHSNSP----DIKPEDIR--RWIEIAVSRHVHDLD 108
Query: 125 L---SLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWS 181
+ S +E IF+ FA KSL LKL + +P +C LKTL L ++F S
Sbjct: 109 IDHFSENENIFL--SSFFACKSLVTLKLRSVTLRDIPSMVCLPSLKTLLLDNVSFVEGKS 166
Query: 182 TQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVN 241
Q+L CPVLE L +Y ++N + ++I +PSL +L + PD++L I +
Sbjct: 167 LQELLSICPVLEDLSVYCDDYENTKELTIVVPSLLSLSL----YIPDEWLLDGYWIDTPS 222
Query: 242 LTSLNCTNYLIFE-LSLC-NLSSLVYAYVDVQLF------GALHNLKLLYV-L*NCLVDF 292
L L ++ + LSL N+ L AYVD + F ++ ++K L + + D
Sbjct: 223 LEYLKLEDWNSCDHLSLIKNMPKLREAYVDAKCFLPKSVIESITSVKHLTICSKDGYGDG 282
Query: 293 RV*NPLHF-----------RIIPLSLQKSPNLESLNFFEFDPNICFIG---EG-GISSNV 337
V N L ++ L+ SPNL L + ++ +G +G S+V
Sbjct: 283 FVFNQLEHLTLCVCRGDSPSLLGQLLKDSPNLRILEISVMEDHVDDVGISLDGWNQPSSV 342
Query: 338 PHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRIVC 380
P C L+ F + G + + Y+L+NA L++T I+
Sbjct: 343 PECLLSSLQIFKWPQYLGRPEDRDIAVYILKNARHLKKTTILA 385
>AT1G55030.1 | Symbols: | F-box family protein |
chr1:20530417-20531768 REVERSE
Length = 422
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 175/404 (43%), Gaps = 49/404 (12%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
G D+IS LP+ ++ IL LPTK I TS LSK+W+ W + L+F + L
Sbjct: 5 GAVTDMISQLPEPLILQILGSLPTKVAITTSVLSKQWQSHWKMMPKLEFDSFL------- 57
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
R L+ V LL + ++ L+ R+ +V + + A+ +
Sbjct: 58 -----RRLDLENVTKCLLSHKAPVLQTFSLKVRLDRRNNAVD-----IGCLIGIAMTRNV 107
Query: 121 EKLNLSL--HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEG 178
KL L + H F P L+ ++L L+L + V+ VP S+ LKTL+L + F+
Sbjct: 108 RKLVLEVYFHRGTFTFPRSLYHCETLETLELILNVVMDVPPSVYLKSLKTLYLLAVDFKD 167
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEIS 238
+ S L GCP L+ L++ N++ +IA+PSL+ L I P C I+
Sbjct: 168 DESVINLLSGCPNLQDLVMRRNSSSNVKTFTIAVPSLQRLAIHNGSGTPQH---CGYTIN 224
Query: 239 AVNLTSLNCTNYLIFE-LSLCNLSSL-------VYAYVDVQLFGALHNLKLLY------- 283
+L L FE + N+S L V +D +L L ++ L
Sbjct: 225 TPSLKYLKLEGSKAFESFMVENVSELIEVNITDVSEIIDEKLRVFLTSVTRLSLALSPSV 284
Query: 284 ------VL*NCLVDFRV*NPLH--FRIIPLSLQKSPNLESLNFFEFDPNICFI---GEGG 332
++ N LV + ++++PL L SP L+ L + + ++ GE
Sbjct: 285 FTFPTGIIFNQLVYLEICTNKTSWWKLLPLMLHSSPKLQVLKLIDDTDGMNYVEASGEWN 344
Query: 333 ISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERT 376
NVP C H L+ F + EI + +Y+L+N L+R
Sbjct: 345 QPKNVPECL-HHLEKFIWEGYKWKREEIEVAKYILKNTNRLKRA 387
>AT4G00160.1 | Symbols: | F-box family protein | chr4:63465-65365
FORWARD
Length = 453
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 184/413 (44%), Gaps = 63/413 (15%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
GKD IS LPD +L ILSFLPTK V+ TS SK+W+ LW V +L+F ++ + K+
Sbjct: 14 GKDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSE---DYDDKE- 69
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+Y+F ++V + L + + RLE S K + +WV A + +
Sbjct: 70 ---QYTFSEIVCKSFLSHKAPVLESFRLEFE------SEKVDPVDIGLWVGIAFSRHLRE 120
Query: 123 LNLSLHE----VIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEG 178
L L + F P L +L L+L + ++ + + L+TLHL+ ++++
Sbjct: 121 LVLVAADTGTGTAFKFPSSLCTCNTLETLRLVLLILVDISSPVVMKSLRTLHLELVSYKD 180
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISI-AIPSLRTLIIDYDCSYPD--------- 228
E S + L GCP+LE+L++ +I +I +PSL+ L I+ D +
Sbjct: 181 ESSIRNLLSGCPILEELLVIRGEDSDIEVFTIDEVPSLKRLTINDDHDGQEFWGYVINAP 240
Query: 229 -------DFLDC---------VVEISAVNLTSLNCTNYLIFELS----LCNLSSLVYAYV 268
+ L C ++E + + TS+ N+L + S L NLS Y
Sbjct: 241 SLKYLLIEDLRCPGFCLNAPELMEANIFDGTSITNDNFLGYLTSVKRLLLNLSPWKITYP 300
Query: 269 DVQLFGALHNLKLLYVL*NCLVDFRV*NPLHFRIIPLSLQKSPNLESL----NFFEFDPN 324
+F L +L++ +D+ + ++ L L+ SP L+ L N +F N
Sbjct: 301 TGSIFYQLVSLEMY----TREIDW-------WDLLTLMLEHSPKLQVLKLTDNCVKFHKN 349
Query: 325 ICFIGEGGISSNVPHCFKHRLKTFFISNFS-GNAAEIHLMRYLLENATVLERT 376
G+ VP C L+TF F G E + Y+L+NA L +
Sbjct: 350 GLPGGKWNEPKYVPECLLSHLETFVWRRFDWGREEEKEIATYILKNARRLNKA 402
>AT4G00315.1 | Symbols: | F-box family protein | chr4:137404-138888
FORWARD
Length = 441
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 183/439 (41%), Gaps = 75/439 (17%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D S LPD++L +LSFLPTKD +RTS LS RWK LW+ + L++ + +V
Sbjct: 2 DKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFR-------HYSVS 54
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNK-IEKL 123
+ + +LL + I L L+ R G S+K + +WV A+ + + +L
Sbjct: 55 EGQGLARFITLSLLGHKAPAIESLSLKLRYGAIG-SIKPE--DIYLWVSLAVHDSNVREL 111
Query: 124 NLSL---HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
+L L E LP L+ KS+ LKL ++ VP +C LKTL L +T+ E
Sbjct: 112 SLKLCTFAERPTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDED 171
Query: 181 STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCS--------------- 225
S +L CPVLE L++ N+ ++S+ + SL+ L + C
Sbjct: 172 SLHRLLSNCPVLEDLVVERDRIDNLGKLSVVVKSLQRLTLKMSCPCHLDGIMMNTPSLKY 231
Query: 226 ----------------------YPDDFLDCV-VEISAVNLTSLNCTNYLIFELSLCNLSS 262
Y DF D +E + LT N + F S+ LS
Sbjct: 232 LKVTDERQESDSDNESDSDSPRYFYDFEDMPKLEEADFVLTFQNIKKFFKFVTSIKRLSL 291
Query: 263 LVYAYVDVQL------FGALHNLKLLYVL*NCLVDFRV*NPLHFRIIPLSLQKSPNLESL 316
+ Y + L F L LK+ +C D+ + ++ L+ SPNL L
Sbjct: 292 CLGVYTEESLYHEGLVFNQLEQLKIC----SCDSDWSI-------LLSRLLESSPNLREL 340
Query: 317 NFFEF----DPNICFIGEGGISSN-VPHCFKHRLKTFFISNFSG-NAAEIHLMRYLLENA 370
+ D + + G N VP C L+TF S G ++ + +Y+L NA
Sbjct: 341 EAYVIEDHPDRRVDLPNQWGNQLNCVPKCLLSSLETFKWSEMYGLLQNQMDVAKYILRNA 400
Query: 371 TVLERTRIVCVQMYQKTRR 389
L+ I Y K R
Sbjct: 401 RCLKSATIFFPTTYAKETR 419
>AT3G59190.1 | Symbols: | F-box family protein |
chr3:21884740-21886101 FORWARD
Length = 388
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 135/284 (47%), Gaps = 32/284 (11%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKN------KLGCN 56
KDIISNLPD +L +LSFLPT + TS L+KRW+ L V +LD N K+G
Sbjct: 10 SKDIISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLDNMIYDRPKMG-- 67
Query: 57 CTSKQTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVK----SWMFRVTMWV 112
++ +E+R SF VD R + L+ PL FS++ S RV WV
Sbjct: 68 --RRKRLELRKSFKLFVD-----------RVMALQGNAPLKKFSLRCKIGSDPSRVNGWV 114
Query: 113 CAALKNKIEKLNLSL-HEVIFILPDCLFASKSLCKLKLTMYCVLRVP-GSICFSCLKTLH 170
L +E+L+L + E + LP + +K+L LK++ + G LKTLH
Sbjct: 115 LKVLDRGVEELDLYIASEYEYPLPPKVLMTKTLVSLKVSGTDEFTIDVGEFFLPKLKTLH 174
Query: 171 LKYITF--EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPD 228
L I+F EG +L C LE+L++ W S++ PSL+ + I DC D
Sbjct: 175 LSAISFGDEGGPPFAKLISACHALEELVMIKMMWDYWEFCSVSSPSLKRVSI--DCENID 232
Query: 229 DFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL 272
+ V NL L T+ + + N SLV A + +++
Sbjct: 233 ENPKS-VSFDTPNLVYLEFTDTVAVKYPKVNFDSLVEASIGLRM 275
>AT1G58310.1 | Symbols: | F-box family protein |
chr1:21631947-21633642 FORWARD
Length = 505
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 145/287 (50%), Gaps = 21/287 (7%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
GR +DIIS LPD +L ILSFL TK+ TS L+K+W++L+ +V +LDF + + +
Sbjct: 4 GRSRDIISGLPDSLLCHILSFLNTKEAASTSVLAKKWRYLFASVPNLDFDDSVHLRLGKR 63
Query: 61 QTVEVRYSFLKLVDS-----ALLFREPYCIRKLRLEPRMPLSGFSVKSW----MFRVTMW 111
+LK+++ + F + + + LRL+ PL FS+K + R+ W
Sbjct: 64 NPAVSGEDYLKMINERSDQLSTSFMD-FVDQVLRLQDNSPLHKFSLKIRDCVDIVRIICW 122
Query: 112 VCAALKNKIEKLNLSLH-EVIFILPDCLFASKSLCKLKLTMYCVLRVP----GSICFSCL 166
+ L+ + L L +H + LP +F S++L +LKL+ V R P + L
Sbjct: 123 ILKVLERGVSDLELDMHLKWKSSLPSKIFLSETLVRLKLS---VERGPFIDVEDVHLPKL 179
Query: 167 KTLHLKYITFEGEW-STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCS 225
KTLH+ + FE +L GC +LE+L L W +S+++ +L+ L +
Sbjct: 180 KTLHIVSVKFEKHGIGLNKLLSGCHILEELNLEYISWCLWDFVSVSLTTLKRLTFCGEVM 239
Query: 226 YPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL 272
++ + V + NL L T+ + E S N SLV A++++Q+
Sbjct: 240 QDENPIS--VSFNTPNLVYLMFTDAIADEYSTVNFDSLVEAHINLQM 284
>AT5G56440.1 | Symbols: | F-box family protein |
chr5:22855742-22857117 REVERSE
Length = 430
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 184/417 (44%), Gaps = 64/417 (15%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS LPDD++ ILSF+PTK V+ T+ LSKRW++LW V LD+++ + T
Sbjct: 2 DRISLLPDDVVFKILSFVPTKVVVSTNLLSKRWRYLWKHVPKLDYRDP-----SLVDTEH 56
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
R S + VD LL E + L L S + W+ A+ ++ N
Sbjct: 57 WRAS--RFVDKFLLLHEAPVLETLHL-------SLSRNCPPSDIETWISVAISRRVR--N 105
Query: 125 LSLHEVI-----FILPDCLFASKSLCKLKLTM-YCVLRVPGSICFSCLKTLHLKYITFEG 178
L ++ I LP L+ ++L L L + + V P CF LK L L + F
Sbjct: 106 LHIYRYIPSTGPIRLPRSLYTCETLVSLYLLLDFTVDDAPFMFCFRSLKVLVLLFAKFSS 165
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLI-IDYDCSYPDDFLDCVVEI 237
+ +L GCPVLE LIL N++ +IA PSL+ LI ID P D + V++
Sbjct: 166 DEIVNRLLSGCPVLEGLILIRRN-DNVKNFTIAAPSLQRLIAIDCRSQVPGDDVGFVIKA 224
Query: 238 SAV-NLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ------LFGALHNLKLLYVL*NCLV 290
++ +LT LN + + F SL + LV A + V+ G L + K L + CL
Sbjct: 225 PSLKSLTLLNFSPHSGFR-SLVKMPDLVKASIKVRHGDSKMFMGCLTSTKRLAL---CLQ 280
Query: 291 DFRV*NPLHF--RIIPLS------------LQKSPNLESLNFFE--------FDP----- 323
P+ +++ LS L +P L L F + DP
Sbjct: 281 PPLDSCPIGVFNQLVSLSLCTCSLGWCRLILNHTPKLRVLRFEQRQAKFYQLLDPLKRCC 340
Query: 324 --NICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
++ + S+VP C L+T ++ G E ++ YLLEN+ L+ I
Sbjct: 341 SSSVDVQTQWEQPSSVPKCLISSLETVEWIDYKGREVEKKVVMYLLENSRQLKTMAI 397
>AT1G78750.1 | Symbols: | F-box family protein |
chr1:29613122-29614695 REVERSE
Length = 458
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 186/428 (43%), Gaps = 71/428 (16%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
R D ISNLP+ +L +L +LPTKDV+++S LS RW++LW V + C+ +
Sbjct: 14 SREVDWISNLPETLLCQVLFYLPTKDVVKSSVLSSRWRNLWKYVPGFNLSY---CDFHVR 70
Query: 61 QTVEVRY-SFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNK 119
T + +FL+ VDS + F C++ RLE SG+ + + + W+ + + K
Sbjct: 71 NTFSYDHNTFLRFVDSFMGFNSQSCLQSFRLE--YDSSGYG-EPKLALIRRWINSVVSRK 127
Query: 120 IEKLNL---SLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITF 176
++ L + S F +P L+ ++L L L L P + LK LHL + F
Sbjct: 128 VKYLGVLDDSCDNYEFEMPPTLYTCETLVYLTLDGLS-LASPKFVSLPSLKELHLSIVKF 186
Query: 177 EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFL--DCV 234
+ + L CPVLE L + + + SL + D D+ L D V
Sbjct: 187 ADHMALETLISQCPVLENLNINRSFCDDFEFTCVRSQSLLSFTHVADT---DEMLNEDLV 243
Query: 235 VEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV-------QLFG------------- 274
V I A L L +++ I L +L+SLV A +D ++F
Sbjct: 244 VAIDAPKLKYLRLSDHRIASFILNDLASLVEADIDTVFNLICKKMFNPNDLNKRNMIRDF 303
Query: 275 --ALHNLKLLYVL*NCL---VDFRV*NPL----------------HFRIIPLSLQKSPNL 313
+ ++K L + + L D+ PL + ++P+ L+ PNL
Sbjct: 304 LVGISSIKTLIIASSTLEVIYDYSRCEPLPLFRNLSSLRVDFYGYKWEMLPIFLESCPNL 363
Query: 314 ESL-----NFFEFDPNICFIGEGGISSNVPHCFKHRLKTFFISN-FSGNAAEIHLMRYLL 367
+SL N+ E EG +VP F L+ I G A E+ L+ YLL
Sbjct: 364 KSLVVGSANYRE--------KEGINILSVPRGFLSSLEYVKIERPLKGEAMEMKLVSYLL 415
Query: 368 ENATVLER 375
EN+T+L++
Sbjct: 416 ENSTILKK 423
>AT5G56420.2 | Symbols: | F-box family protein |
chr5:22850863-22852334 REVERSE
Length = 422
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 140/287 (48%), Gaps = 22/287 (7%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D +S LPDD L ILS+LPTKDV+ TS LSKRW+ LW V L++ +L N +
Sbjct: 5 RDRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHDNTCPR--- 61
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
F + VD +LL + + L + ++ F+ + V +WV + + +L
Sbjct: 62 -----FSQFVDRSLLLHKAPTLESLNI--KIGSICFTAEK---DVGVWVRIGVDRFVREL 111
Query: 124 NLSL--HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWS 181
++S E LP CLF +L LKL + +CF LKTLHL + + + S
Sbjct: 112 SVSYCSGEEPIRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQS 171
Query: 182 TQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVN 241
++ C LE L++ C N++ +++ PSL+TL + + S + D I
Sbjct: 172 LPRIISSCSSLEDLVVQRCPGDNVKVVTVTAPSLKTLSL-HKSSQAFEGDDDGFLIDTPK 230
Query: 242 LTSLNCTNYLIFELSLCNLSSLVYAYVDV------QLFGALHNLKLL 282
L ++ +Y + N+ +V A VDV +L G++ ++K L
Sbjct: 231 LKRVDIEDYWGGFCYIENMPEVVEANVDVIYKNTEKLLGSITSVKRL 277
>AT5G56420.1 | Symbols: | F-box family protein |
chr5:22850863-22852334 REVERSE
Length = 422
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 140/287 (48%), Gaps = 22/287 (7%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D +S LPDD L ILS+LPTKDV+ TS LSKRW+ LW V L++ +L N +
Sbjct: 5 RDRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHDNTCPR--- 61
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
F + VD +LL + + L + ++ F+ + V +WV + + +L
Sbjct: 62 -----FSQFVDRSLLLHKAPTLESLNI--KIGSICFTAEK---DVGVWVRIGVDRFVREL 111
Query: 124 NLSL--HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWS 181
++S E LP CLF +L LKL + +CF LKTLHL + + + S
Sbjct: 112 SVSYCSGEEPIRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQS 171
Query: 182 TQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVN 241
++ C LE L++ C N++ +++ PSL+TL + + S + D I
Sbjct: 172 LPRIISSCSSLEDLVVQRCPGDNVKVVTVTAPSLKTLSL-HKSSQAFEGDDDGFLIDTPK 230
Query: 242 LTSLNCTNYLIFELSLCNLSSLVYAYVDV------QLFGALHNLKLL 282
L ++ +Y + N+ +V A VDV +L G++ ++K L
Sbjct: 231 LKRVDIEDYWGGFCYIENMPEVVEANVDVIYKNTEKLLGSITSVKRL 277
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE
Length = 838
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 140/291 (48%), Gaps = 38/291 (13%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D IS LPD++LG ILS +PTK + TS L+K+W+ ++ V L+ + QT
Sbjct: 231 RDAISWLPDEVLGKILSLIPTKQAVSTSLLAKKWRTIFRLVDHLELDDSFSLQAVKDQTP 290
Query: 64 EVRYSFLKLVDSALLFREPYCI---RKLRLEPRMPLSGFSVKSWMFR--------VTMWV 112
+R +F E + I R L L+ P+ FS+K + + V W+
Sbjct: 291 GLRKHV------RFVFTEDFKIFVDRTLALQCDYPIKNFSLKCHVSKYDERQKACVGRWI 344
Query: 113 CAALKNKIEKLNLSLHE-VIFILPDCLFASKSLCKLKL-TMYCVLRVPGSICFSCLKTLH 170
+ + +L+L + + I LP L ASK+L KL L T C+ ++P + LK+L
Sbjct: 345 SNVVGRGVFELDLRMKDPGIHFLPPHLVASKTLVKLTLGTQLCLGQLPSYVSLPSLKSLF 404
Query: 171 LKYITF-EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDD 229
+ I F + E L GCPVLE+L +++ + +I+ P+L+ L +DY C PDD
Sbjct: 405 IDTIVFYDIEDLCCVLLAGCPVLEELSVHHHDFIATPH-TISSPTLKRLSVDYHC--PDD 461
Query: 230 FLDCVVEISAVNLTSLNCTNYLIFELSLC--------NLSSLVYAYVDVQL 272
+ + + S + + E S C NL SLV A +D+ L
Sbjct: 462 -------VDSASHMSFDLPKLVYLEYSHCALGEYWQINLESLVEAKLDLGL 505
>AT3G58860.1 | Symbols: | F-box family protein |
chr3:21763742-21765306 REVERSE
Length = 457
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 186/419 (44%), Gaps = 60/419 (14%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D+ S LPD+++ ILS LPTK+ TS L+K+W++L+ V LDF + L ++
Sbjct: 7 DLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEGKREK 66
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+ SF+ VD L + I+K L + +G RV W+C L+ +
Sbjct: 67 DGILRSFMDFVDRVLALQGASPIKKFSLNVK---TGVDPD----RVDRWICNVLQRGVSH 119
Query: 123 LNLSLH-EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICF-SCLKTLHLKYITFEGEW 180
L L + E + LP + SK+L +LK L + F LKTL L+ + F G
Sbjct: 120 LALFMDFEEEYSLPYEISVSKTLVELKTGYGVDLYLWDDDMFLPMLKTLVLESVEF-GRG 178
Query: 181 STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAV 240
Q L CPVLE+L+L N WK+ R + ++ SL+ L I +D +
Sbjct: 179 QFQTLLPACPVLEELMLLNMEWKD-RNVILSSSSLKNLKI-----TSEDGCLGTLSFDTP 232
Query: 241 NLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFG-----ALHNL-KLLYVL*NCLVDFRV 294
NL L+ +Y+ + + NL +LV +++ L A N+ L++ + N + F +
Sbjct: 233 NLVFLDYYDYVAEDYPIVNLKNLVEVGINLVLTADRINRARDNVWNLIHGIQNAEI-FHI 291
Query: 295 *NPLHFRIIPLSLQKSP---NLESLN--------------FFEFDPNICFIGEGGISSNV 337
+P+ F ++ LS + P NL +LN + PN+ + GG+ V
Sbjct: 292 -SPVTFEVLSLSCEAMPVFKNLTTLNIRTVMQQGWQAMPLLLKNCPNLETLYLGGLLHTV 350
Query: 338 -----------PHCFKHR------LKTFFISNFSGNAAEIHLMRYLLENATVLERTRIV 379
P K R + I F G E+H++++ L+ L+ I+
Sbjct: 351 TNKCGDVCDCIPRKKKGRSLMACPVNKIQIQGFRGTIREVHMIKHFLDFCPSLKEMEII 409
>AT5G56400.1 | Symbols: | F-box family protein |
chr5:22846069-22847615 REVERSE
Length = 455
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 173/413 (41%), Gaps = 64/413 (15%)
Query: 5 DIISNLPDDILGCILSFLPT-KDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
D IS+LP+D+L ILS LPT D++ TS +SKRW+ LW V L F +++
Sbjct: 33 DKISDLPEDLLVHILSLLPTTNDIVATSGVSKRWESLWTKVHKLRFNDRIYDG------- 85
Query: 64 EVRY-SFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
RY SFL V+ +L+ + + LRL K + +W+ AL I +
Sbjct: 86 -KRYDSFLHFVEKSLILHKAPTLVSLRL-------SVGPKCTADDIGLWIKLALDRNICE 137
Query: 123 LNLSLHEVIFILPDC--------LFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYI 174
L +I PD L SK+L LKL + + CF LKTLHL+Y+
Sbjct: 138 L------IIKHYPDHGHIRLSRRLCDSKTLVSLKLKNAILGAIWLPTCFISLKTLHLRYV 191
Query: 175 TFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCV 234
+ G+ S + L CP L L++ N++R +I + L++L + + D
Sbjct: 192 KYSGDESVRTLISSCPSLRNLVVKRHNEDNVKRFAIIVRYLQSLTVYLSPLHGVADSDAY 251
Query: 235 VEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV------QLFGALHNLKLLYVL*NC 288
V I+ NL LN ++ S ++ L A +DV F +L ++K L + C
Sbjct: 252 V-INTPNLKYLNIKDHYTDLCSFEDMPYLDEANLDVAFTHTENFFESLTSVKKLSL---C 307
Query: 289 LVDFRV*NPLH-------------------FRIIPLSLQKSPNLESLNF----FEFDPNI 325
L P I+ + L SP L L +F
Sbjct: 308 LKKSNAQYPEGIIFSQLDHLELCTCDDSKWLNILAMLLPDSPKLRVLKLNDKNHDFVDKY 367
Query: 326 CFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
C S VP C L+ F N+ E + Y+L+N+T L++T I
Sbjct: 368 CSCTWNQQPSYVPECLTKSLEIFEWRNYKATFRERDVAVYILKNSTCLKKTVI 420
>AT3G26922.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana
protein match is: F-box family protein
(TAIR:AT3G52680.2). | chr3:9922858-9923891 FORWARD
Length = 306
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 111/231 (48%), Gaps = 20/231 (8%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
G +D IS+LP+ +L ILS LP KDV+ TS LSK W+ LW V L F + +
Sbjct: 10 GVNEDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKF------DYENN 63
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKS-WMFRVTMWVCAALKNK 119
Q+ + YS ++V LL + + L L GF V MW+ A
Sbjct: 64 QSEDETYS--EIVCRLLLSNKAPFLESLHL-------GFRFGECRSVEVGMWIGIAYARH 114
Query: 120 IEKLNLSLHEV--IFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFE 177
+ L L + V FI P L+ ++L L L + ++ VP C L+TL L+ + ++
Sbjct: 115 VRDLVLHVESVKGSFIFPTGLYNCETLESLTLRSWVLVDVPSPACLKSLRTLRLENVDYK 174
Query: 178 GEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLII--DYDCSY 226
+ S L GCP LE L++Y + +IA+PSL+ L I D D Y
Sbjct: 175 YDDSVYNLLSGCPNLENLVVYRGNLLEVETFTIAVPSLQRLTIYDDNDGEY 225
>AT5G38590.1 | Symbols: | F-box family protein |
chr5:15452586-15453455 REVERSE
Length = 289
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 136/274 (49%), Gaps = 24/274 (8%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D I+ LPDD+L ILS++PT + TS LSKRW+ LW+ + +LD+ ++ C V
Sbjct: 2 DKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTSRW---CRKPGDVG 58
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
+R K + L R P I LR P +K R W+ A+ + L+
Sbjct: 59 LRDFIHK---NLPLHRAP-VIESLRFHSNSP----DIKPEDIR--RWIEIAVSRHVHDLD 108
Query: 125 L---SLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWS 181
+ S +E IF+ FA KSL LKL + +P +C LKTL L ++F S
Sbjct: 109 IDHFSENENIFL--SSFFACKSLVTLKLRSVTLRDIPSMVCLPSLKTLLLDNVSFVEGKS 166
Query: 182 TQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVN 241
Q+L CPVLE L +Y ++N + ++I +PSL +L + PD++L I +
Sbjct: 167 LQELLSICPVLEDLSVYCDDYENTKELTIVVPSLLSLSL----YIPDEWLLDGYWIDTPS 222
Query: 242 LTSLNCTNYLIFE-LSLC-NLSSLVYAYVDVQLF 273
L L ++ + LSL N+ L AYVD + F
Sbjct: 223 LEYLKLEDWNSCDHLSLIKNMPKLREAYVDAKCF 256
>AT1G06630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G60040.1); Has
1188 Blast hits to 1155 proteins in 9 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1187;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
| chr1:2028071-2031173 FORWARD
Length = 477
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 15/272 (5%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D I+ LPD+ILG ILS L TK + TS LSK+W+ L+ V L+F + + + +
Sbjct: 11 RDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQEASY 70
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
SF LVD + + Y IRKL L+ + K+ + R W+ + + ++
Sbjct: 71 VFPESFKDLVDRTVALQCDYPIRKLSLKCHVGRDDEQRKACVGR---WISNVVGRGVSEV 127
Query: 124 NLSLHE-VIFILPDCLFASKSLCKLKLTMYCVL-RVPGSICFSCLKTLHLKYITFE--GE 179
L +++ + L L K+L KL L L ++P + LK L + + F+ GE
Sbjct: 128 VLRINDRGLHFLSPQLLTCKTLVKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFFDDFGE 187
Query: 180 WSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISA 239
S L GCPV+E L L G +I+ P+L+ L + Y+ + + V+
Sbjct: 188 LSN-VLLAGCPVVEALYLNQNG--ESMPYTISSPTLKRLSVHYEYHF-----ESVISFDL 239
Query: 240 VNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ 271
NL L+ ++Y ++ NL SLV AY+++
Sbjct: 240 PNLEYLDYSDYALYGYPQVNLESLVEAYLNLD 271
>AT1G06630.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G60040.1). |
chr1:2028071-2030344 FORWARD
Length = 461
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 15/272 (5%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D I+ LPD+ILG ILS L TK + TS LSK+W+ L+ V L+F + + + +
Sbjct: 11 RDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQEASY 70
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
SF LVD + + Y IRKL L+ + K+ + R W+ + + ++
Sbjct: 71 VFPESFKDLVDRTVALQCDYPIRKLSLKCHVGRDDEQRKACVGR---WISNVVGRGVSEV 127
Query: 124 NLSLHE-VIFILPDCLFASKSLCKLKLTMYCVL-RVPGSICFSCLKTLHLKYITFE--GE 179
L +++ + L L K+L KL L L ++P + LK L + + F+ GE
Sbjct: 128 VLRINDRGLHFLSPQLLTCKTLVKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFFDDFGE 187
Query: 180 WSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISA 239
S L GCPV+E L L G +I+ P+L+ L + Y+ + + V+
Sbjct: 188 LSN-VLLAGCPVVEALYLNQNG--ESMPYTISSPTLKRLSVHYEYHF-----ESVISFDL 239
Query: 240 VNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ 271
NL L+ ++Y ++ NL SLV AY+++
Sbjct: 240 PNLEYLDYSDYALYGYPQVNLESLVEAYLNLD 271
>AT1G06630.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G60040.1). |
chr1:2028071-2029442 FORWARD
Length = 403
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 17/273 (6%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D I+ LPD+ILG ILS L TK + TS LSK+W+ L+ V L+F + + + +
Sbjct: 11 RDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQEASY 70
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
SF LVD + + Y IRKL L+ + K+ + R W+ + + ++
Sbjct: 71 VFPESFKDLVDRTVALQCDYPIRKLSLKCHVGRDDEQRKACVGR---WISNVVGRGVSEV 127
Query: 124 NLSLHE--VIFILPDCLFASKSLCKLKLTMYCVL-RVPGSICFSCLKTLHLKYITFE--G 178
L +++ + F+ P L K+L KL L L ++P + LK L + + F+ G
Sbjct: 128 VLRINDRGLHFLSPQ-LLTCKTLVKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFFDDFG 186
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEIS 238
E S L GCPV+E L L G +I+ P+L+ L + Y+ + + V+
Sbjct: 187 ELSN-VLLAGCPVVEALYLNQNG--ESMPYTISSPTLKRLSVHYEYHF-----ESVISFD 238
Query: 239 AVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ 271
NL L+ ++Y ++ NL SLV AY+++
Sbjct: 239 LPNLEYLDYSDYALYGYPQVNLESLVEAYLNLD 271
>AT3G42770.1 | Symbols: | F-box family protein |
chr3:14867122-14870083 FORWARD
Length = 532
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 177/407 (43%), Gaps = 56/407 (13%)
Query: 10 LPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQ--TVEVRY 67
LPD++L ILSFLPTK+ TS LSKRW+ L+ +LDF N L ++ ++
Sbjct: 4 LPDELLVQILSFLPTKEATSTSLLSKRWRTLFTLSPNLDFDNSLLLQSKKRKWNMRNIQK 63
Query: 68 SFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLNLSL 127
SF+ VDS L + I+ L+ + L + + V W+C AL++ + +L+L +
Sbjct: 64 SFVGFVDSTLALQGGKGIKSFSLKFKETLGDVNGE---VDVNRWICNALEHGVSELHLRI 120
Query: 128 HEVIFI-LPDCLFASKSLCKLKL-TMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQQL 185
LP +F S L KL L T C VP I LK L L I FE Q
Sbjct: 121 DYTKRCHLPSEIFTSTKLVKLSLVTQSCFPVVPNCISLPSLKVLFLDSIWFE----VPQF 176
Query: 186 FL---GCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEI-SAVN 241
+ CP LE L +Y I+ +++ L + Y C Y F+D +++ + +
Sbjct: 177 LIFLTACPALEDLTIYQKPHSVGMPYHISSKTIKRLSVTYTCGY---FVDYGLKLFNTPS 233
Query: 242 LTSLNCTNYLIFELSLCNLSSLVYAYVDV-----------QLFGALHNLKLLYVL*NC-- 288
+ L ++Y+ + NL SL A +D+ +L + N+K L++ +
Sbjct: 234 VVDLYYSDYVRHKYPHMNLDSLPKATLDIHFLDDNAANVTELLSGIRNVKTLHLTSSTVK 293
Query: 289 ---------LVDFRV*NPLHFR--------IIPLSLQKSPNLESLNFFEFDPNICFIGEG 331
+ F L F ++PL L+ PNL +L D N F+G
Sbjct: 294 VILLCCKGEIPMFENLINLKFSGKTRQWKFLLPLLLEICPNLTTLVLSGLDQN-WFVGFR 352
Query: 332 GISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
+N ++K I + G+ E+ L+ Y + L+ ++
Sbjct: 353 TPPNN-------QVKMLSIMQYQGSERELKLISYFVLKMECLQVVKV 392
>AT5G41840.1 | Symbols: | F-box family protein |
chr5:16754436-16756263 REVERSE
Length = 540
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 116/244 (47%), Gaps = 41/244 (16%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
G D IS LPD ++ ILSFLPTK+ T+ L+KRWK L V +L+F + + + ++
Sbjct: 10 GVSGDRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPRAR 69
Query: 61 QTVEVR--YSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVK-------SWMFRVTMW 111
+ + SF+ VDS L L+ + + PL F VK SW+ W
Sbjct: 70 RNKYSKSYESFMSFVDSVL---------ALQAKTKTPLKRFHVKCEDVVDQSWVLE---W 117
Query: 112 VCAALKNKIEKLNLSLH----------EVIFILPDCLFASKSLCKLKLTMY--CVLRVPG 159
+ LK + L++ LH + LP +F SK+L +LK+ + V G
Sbjct: 118 IPKVLKRGV--LDIDLHITSSRNYCENSSFYSLPSKIFVSKTLVRLKIQFQDGVHIDVEG 175
Query: 160 SICFSCLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRR-----ISIAIPS 214
+ LKTLHL Y E +L GC LE+L+L N W + +S++IP+
Sbjct: 176 GVSLPKLKTLHLDYFKIETSM-LNKLLSGCHALEELVLANLMWADSSEDEACHVSVSIPT 234
Query: 215 LRTL 218
L+ L
Sbjct: 235 LKRL 238
>AT3G58880.1 | Symbols: | F-box family protein |
chr3:21768485-21770167 REVERSE
Length = 454
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 129/272 (47%), Gaps = 23/272 (8%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNC-TSKQTV 63
D++S+LPDD+LG ILS L TK+ TS LSKRW++L V L+F + N KQT
Sbjct: 3 DLVSSLPDDLLGHILSLLTTKEAALTSILSKRWRYLIAFVPYLEFDDSAFLNPEEGKQTR 62
Query: 64 E-VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
E R SF+ VD L IRK L+ + + + + W+C L+ +
Sbjct: 63 EGTRQSFIDFVDRVLALHGDSPIRKFSLKCKTGVD-------LDLLNQWICNVLQRGVLL 115
Query: 123 LNLSL---HEVIFILPDCLFASKSLCKLKLTMYCVLRV-PGSI-CFSCLKTLHLKYITFE 177
++LS+ H +FI +F S++L +LKL C + P I LKTL L +++
Sbjct: 116 IDLSMDLGHRCMFIE---IFMSRTLVELKLGSGCRIAFGPEHISALPMLKTLTLDSVSWS 172
Query: 178 GEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLII-DYDCSYPDDFLDCVVE 236
++L CP LE L L N + +++I SL+TL I S P V
Sbjct: 173 DSGQLERLLSACPALEALNLANV-HGSYPNATVSIASLKTLTIKSVSLSGPAH----VFS 227
Query: 237 ISAVNLTSLNCTNYLIFELSLCNLSSLVYAYV 268
NL LN T + L NL LV A +
Sbjct: 228 FDTPNLLCLNYTALFEDDYPLVNLEYLVEAQI 259
>AT5G56410.1 | Symbols: | F-box family protein |
chr5:22848508-22850331 REVERSE
Length = 503
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 181/437 (41%), Gaps = 75/437 (17%)
Query: 5 DIISNLPDD-ILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKL--------GC 55
D I+ DD +L ILSFLPTK + TS LSK+WK LW+ + L++ + + G
Sbjct: 2 DKITGFSDDELLVKILSFLPTKAAVTTSILSKQWKFLWMRLPKLEYHDDIKIYILYMRGG 61
Query: 56 NCTSKQTV--EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVC 113
+ + ++ E + +D L I LRL L F +S + +WV
Sbjct: 62 SRSRTDSILLEKSQRMWRFIDKNLPLHSSPVIESLRLTIYNEL--FQPES----INLWVE 115
Query: 114 AALKNKIEKLNLSLH----EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTL 169
A+ +++L++ + +LP L+ KSL LKL ++ VP C LKTL
Sbjct: 116 IAVSRCVKELSVRFSPFKGKRDALLPTTLYTCKSLVTLKLRENILVDVPHVFCLPSLKTL 175
Query: 170 HLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDY--DCSYP 227
HL ++T+ E S Q+L C VLE L++ N+R ++ IPSL +L + CS
Sbjct: 176 HLSHVTYADEESLQRLLSNCFVLEDLVVERRVGDNVRNFAVIIPSLLSLSFEILGQCSSE 235
Query: 228 D--------------DFLDC--------------VVEISAVNLTSLNCTNYLIFELSL-- 257
+ DF +C V + N+ L + + LSL
Sbjct: 236 EYVIHTPSLKYFKARDFGECSTCLILNMPKLEEVFVSTAGHNIKKLLESVTYVKRLSLFI 295
Query: 258 --CNLSSLVYAYVDVQLFGALHNLKLLYVL*NCLVDFRV*NPLHFRIIPLSLQKSPNLES 315
N + Y DV +F L +L + C +++ L SP L +
Sbjct: 296 PDNNAEAFTALYGDVIVFNQLEHLTFIIWEAYC-----------SKLLYWLLIASPKLRN 344
Query: 316 LNF---FEFDPNICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIH---LMRYLLEN 369
L F F D + + ++VP C L+TF + GN I L ++L N
Sbjct: 345 LEFNDQFSSDGMDTLVFWEQMITSVPQCLLSSLQTF---KWLGNGDSIEGKDLATFILRN 401
Query: 370 ATVLERTRIVCVQMYQK 386
+ L+ I Q K
Sbjct: 402 SCQLKTATISIGQGQNK 418
>AT3G59210.1 | Symbols: | F-box family protein |
chr3:21889942-21891553 FORWARD
Length = 484
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 114/221 (51%), Gaps = 10/221 (4%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
KDII+ LPD++L ILS L TK+ TS LSKRW++L+ V +LDF +
Sbjct: 5 SKDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFDVLPSLHPEVAMQ 64
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+ + SF+ VD L R I K L+ G ++ V W+ L++ +
Sbjct: 65 DQDQTSFIDFVDRVLKLRGKDHINKFSLK-----CGDGIEDE--DVFPWILNTLRHGVSD 117
Query: 123 LNLSLH-EVIFILPDCLFASKSLCKLKLTMYCVLRVP-GSICFSCLKTLHLKYITF-EGE 179
L+L + +++ LP +FASK+L +LK+ RV ++C LKTL+L + F EG+
Sbjct: 118 LSLHVSPSLVYWLPSKVFASKTLVRLKIGPKDGPRVKLRNVCLPKLKTLNLDSVVFEEGK 177
Query: 180 WSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLII 220
+L GCPVLE+L L N W S++ L+ L +
Sbjct: 178 IGFAKLLSGCPVLEELSLLNLAWDRWDSCSVSSKILKRLTL 218
>AT4G09920.1 | Symbols: | F-box family protein |
chr4:6224691-6225905 FORWARD
Length = 316
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D I LPD++L ILSF+PTK + TS LSKRW+ LW+ ++ L F SK+ E
Sbjct: 2 DRIIGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKF--------GSKRYSE 53
Query: 65 VRYSFLK-LVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
+ L+ +D L I RL LS K R MWV A+ I +L
Sbjct: 54 SEFKRLQCFLDRNLPLHRAPVIESFRLV----LSDSHFKPEDIR--MWVVVAVSRYIREL 107
Query: 124 NL-SLH--EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
+ S H E ILP L+ KSL LKL +L VP +C LKTL LK + + +
Sbjct: 108 KIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQG 167
Query: 181 STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTL 218
S Q+L CPVLE L + +I + +PSL+ L
Sbjct: 168 SLQRLLCNCPVLEDLFVLLLRCDDIGMFIVIVPSLQRL 205
>AT4G15060.1 | Symbols: | F-box protein-related |
chr4:8599035-8601761 FORWARD
Length = 572
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 118/224 (52%), Gaps = 17/224 (7%)
Query: 2 RGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQ 61
R D IS LPDD+L +L FLPTK + TS LSKRW+ LW+ + L++ N N ++ +
Sbjct: 169 RDMDKISRLPDDLLVKVLLFLPTKIAVSTSILSKRWEFLWMWLPKLEYHN---TNYSASE 225
Query: 62 TVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
+R SF+ L + L R P I LRL+ + G S+K + W+ A+ +
Sbjct: 226 EQRLR-SFINL--NLQLHRAP-IIESLRLKFSL---GRSIKPQ--NIKQWIIIAVFRCVR 276
Query: 122 KLNLSLHEVIFI-----LPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITF 176
+L+++L + I LP L+ SKSL LKL ++ VP LK L LK +T+
Sbjct: 277 ELSINLFPLYCIENPAKLPSSLYISKSLVILKLKDQILVDVPRMAYLPSLKYLLLKRVTY 336
Query: 177 EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLII 220
+ S QL CPVL+ L++ + + +SI + SL+ L +
Sbjct: 337 KDSNSLHQLLSSCPVLKNLVVERDEYNHDETLSITVSSLQRLTL 380
>AT5G22660.2 | Symbols: | F-box family protein |
chr5:7536328-7537853 REVERSE
Length = 450
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 189/426 (44%), Gaps = 72/426 (16%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
G+D IS+LPD +L ILS LPT++ + TS LS RWK LW++ LD + T+ +
Sbjct: 11 GEDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVLDIDIDAFDDATTFIS 70
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
R+ +DS F++ C+ KL++ +M M+ + W+ A+K +I+
Sbjct: 71 FATRF-----LDS---FKDS-CLHKLQISFQMEAVD------MWTIIPWIEDAVKRRIQH 115
Query: 123 LNLS--LHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
L + + +I LP ++ S+SL L+L + + R + LK +HL+ +
Sbjct: 116 LEVDSRIDHMIDTLPLTVYLSESLVSLRLHLVMLHRFVF-VSLPNLKVMHLEENIYSYAE 174
Query: 181 STQQLFLGCPVLEKLILY----NCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVE 236
+ ++ CPVLE L + K +R S ++ SL+ +I C Y DD D V
Sbjct: 175 TMEKFISSCPVLEDLTVVRNVDEATEKVLRVSSQSLNSLKLVIDSSKCWYNDDSDDWKVV 234
Query: 237 ISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV--------------------QLFGAL 276
I A L L+ + + NL S A + V + L
Sbjct: 235 IDAPQLVYLSLKDDQSVSFVINNLCSSAKADIKVSFNVSDIWDLEESFERSNVGKFLTGL 294
Query: 277 HNLKLL------------YVL*NCLVDFRV*NPLHFR-------IIPLSLQKSPNLESLN 317
+L+ + Y+ + FR LH + ++P L+ PNL+SL
Sbjct: 295 SSLRDMTISGTTLKIICHYLKHEPMPQFRNMTRLHAKFYVCDLEMLPCVLESCPNLKSLV 354
Query: 318 F---FEFDPNICFIGEGGISSNVPHCFKHRLKTFFI--SNFSGNAAEIHLMRYLLENATV 372
E + E +SS+VP C + L+ I N+ G+ E+ L +Y LEN+ V
Sbjct: 355 LKLKGEMENE-----EISLSSSVPKCLQSSLENVEIIRPNY-GSGEEMKLSKYFLENSLV 408
Query: 373 LERTRI 378
L++ ++
Sbjct: 409 LKKFKL 414
>AT3G44060.1 | Symbols: | F-box family protein |
chr3:15824938-15826391 REVERSE
Length = 427
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 26/218 (11%)
Query: 10 LPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEVRYSF 69
LPDD+L IL LPTK+ + TS LSKRW+ L+ +LDF + + S + ++ SF
Sbjct: 4 LPDDLLVQILYLLPTKEAVSTSVLSKRWRTLFTRSDNLDFHDPI-----SGRPEDILKSF 58
Query: 70 LKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRV-TMWVCAALKNKIEKLNLSL- 127
VDS+L F+ I+K L + +K++ + V W+C AL++ + +L+L L
Sbjct: 59 NDFVDSSLAFQGGKHIKKFSLHTK-------IKTFEYHVLDRWICNALEHGVSELHLHLM 111
Query: 128 HEV---IFILPDCLFASKSLCKLKLT--MYCVLRVPGSICFSCLKTLHLKYITFEGEWST 182
HE +F +P +F S +L KL L +YC P LK L L I F + +
Sbjct: 112 HESWPWLFSIPSKVFNSSTLVKLSLGSRLYCP-SFPPDTSLPALKVLLLDSILFRDDQLS 170
Query: 183 QQLFLGCPVLEKLILYNC------GWKNIRRISIAIPS 214
CP LE L +++ K+I+++S+++ S
Sbjct: 171 NVFLAACPALEDLTIHHTYHPCVISSKSIKKLSLSVNS 208
>AT3G59230.1 | Symbols: | F-box family protein |
chr3:21896052-21897787 REVERSE
Length = 491
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 17/225 (7%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKN--KLGCNCTSKQ 61
KDII++LP+ ++ ILSFL TK+ TS LS++W++ + V +LDF + ++ + +++
Sbjct: 11 KDIINSLPEALIYHILSFLSTKEAAITSLLSRKWRYFFAFVPNLDFDDPVRMQPDMGNQE 70
Query: 62 TVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
E+ SF+ VD L R + K L+ + G VT W+ L+ +
Sbjct: 71 ETEIHTSFMDFVDRVLALRGNSHVNKFSLKCGNGVDGVG-------VTRWILNTLELSVS 123
Query: 122 KLNLSL-HEVIFILPDCLFASKSLCKLKLTMYCVLRVP------GSICFSCLKTLHLKYI 174
+L+LS+ + ++ P +F SKSL +L++ L G + LKTL+L +
Sbjct: 124 ELDLSIASDTTYLFPSKVFVSKSLVRLRIEARNGLAFGSLVIDVGDVSLPKLKTLYLDSV 183
Query: 175 TFEGE-WSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTL 218
+ + +L GC VLE+L++ + W S +IP+L+ L
Sbjct: 184 ELDYQIICLAKLLSGCHVLEELVMIDVVWNFWESCSASIPTLKRL 228
>AT5G56810.1 | Symbols: | F-box family protein |
chr5:22974520-22975992 FORWARD
Length = 435
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 174/403 (43%), Gaps = 44/403 (10%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS LP+D+L ILS +P D + TS LSKRWK +W + L + N S
Sbjct: 15 DRISQLPNDLLFRILSLIPVSDAMSTSLLSKRWKSVWKMLPTLVYNENSCSNIGS----- 69
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
F + +L E ++ L LE R S+ S +F L+ I+
Sbjct: 70 --LGFDQFCGRSLQLHEAPLLKTLTLELRKQTD--SLDSSIFPNIH--STLLEFSIKSTG 123
Query: 125 LSLHEVIFILPDCLFASKSLCKLKLTM-YCVLRVPGSICFSCLKTLHLKYITFEGEWSTQ 183
++ P+ L ++L LKL C+ V +CF LK+L+L + FE E S
Sbjct: 124 YPVYYSTISFPNNLDVFQTLVVLKLQGNICLDVVDSPVCFQSLKSLYLTCVNFENEESFS 183
Query: 184 QLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVNLT 243
+L CPVLE L L SI++PSL+ L + +Y + + ++EI+A +L
Sbjct: 184 KLLSACPVLEDLFLQRLCSVGRFLFSISVPSLQRLTYTKEQAYYSND-EAILEITAPSLK 242
Query: 244 SLNCTNYLIFELSLCNLSSLVYAYVDVQLFGALHNLKLLYVL*NCLVD------------ 291
LN + + + ++ LV A V V+L K+L + + +D
Sbjct: 243 HLNIFDRVGVFSFIEDMPKLVEASVRVKLSKNEKLPKVLTSVEHLSLDLYPSMVFHLDDR 302
Query: 292 FRV*NPLHFRI-IPLSLQKS---------PNLESLNFFEFDPNI------CFIGEGGISS 335
F LH ++ I + Q + PNL+SL P+ C + E S
Sbjct: 303 FISKQLLHLKLDIYDNFQSNLLLSLLKDLPNLQSLKLNHSHPSYNVEDQPCSVSE---PS 359
Query: 336 NVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
+VP C L+TF ++G EI Y+L+NA L+ I
Sbjct: 360 SVPECLSFHLETFQWIGYAGTFEEIAAAVYVLKNARCLKNATI 402
>AT5G38396.1 | Symbols: | F-box family protein |
chr5:15373094-15374726 FORWARD
Length = 462
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 118/235 (50%), Gaps = 35/235 (14%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D++ N+PD+++ ILSFL TK+ TS LSKRW++L VS+L + L +
Sbjct: 2 DLLRNIPDELICHILSFLTTKEAALTSVLSKRWRNLLAFVSNLHIDDSIFLHPEEGKRDR 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMF-----RVTMWVCAALK 117
E+R SFL V R L L+ P+ S+K ++F RV W+ L
Sbjct: 62 NEIRQSFLDFVG-----------RILALQGNCPVKKVSIK-FLFKLDSDRVDGWISNVLA 109
Query: 118 NKIEKLNLSLH---EVIFILPDCLFASKSLCKLKLTMYCVLR-------VPGSICFSCLK 167
+ +L+LS+ + F+L F SK+L +LKL C+ + + G I LK
Sbjct: 110 RGVSELDLSIDLCMDEYFLLSSKRFESKNLVRLKLHRLCIGQREKTVGWLAGEIFLPMLK 169
Query: 168 TLHLKYITFEGEWSTQQLFL-GCPVLEKLILYNCGW-KNIRRISIAIPSLRTLII 220
TL L Y+ F G+ LFL P LE+L++ + W ++++ PSL+TL +
Sbjct: 170 TLELDYVGFYGDL----LFLRALPALEELVIVDAFWFTTFTDVTVSNPSLKTLTM 220
>AT5G41630.1 | Symbols: | F-box family protein |
chr5:16650282-16651835 FORWARD
Length = 455
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 114/229 (49%), Gaps = 14/229 (6%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
G G+DIIS+LPD ++G ILSFLPT + + T+ L+KRWK L V LDF + L C +K
Sbjct: 8 GGGRDIISDLPDALIGHILSFLPTIEAVATTVLAKRWKPLLSFVHSLDFDDSL-CLHPAK 66
Query: 61 QTVEVR---YSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALK 117
E R SF++ VD L + I K RL + ++ V W+ V + ++
Sbjct: 67 TNEEKRTNATSFMRFVDGVLALQGNARINKFRLNGKHIINERWVLDWIQNVLKRDVSDIR 126
Query: 118 NKIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLR--VPGSICFSCLKTLHLKYIT 175
+ + + LP +F S++L L + + V + LKTLHL +
Sbjct: 127 LYVSSCSDGFDSSFYHLPPEIFVSQTLVTLIIMFEGDINISVGREVSLPKLKTLHLYH-- 184
Query: 176 FEGEWST-QQLFLGCPVLEKLILYNCGWKNIRR-----ISIAIPSLRTL 218
F+ + ST +L GC LE+L++ N W ++I +P+L+ L
Sbjct: 185 FKIKLSTFNKLISGCHALEELMMINWKWDESSEPEPCFVTIYLPNLKIL 233
>AT1G32375.1 | Symbols: | F-box family protein |
chr1:11679230-11680679 FORWARD
Length = 422
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 176/415 (42%), Gaps = 67/415 (16%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D +S LP+ +L ILS L KDV+ T LSKRW+ LW+ V L + + S Q +E
Sbjct: 2 DKLSQLPEALLVRILSLLSAKDVVSTMVLSKRWQFLWMLVPKLIYDD-------SYQAIE 54
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKN------ 118
SF + VD + + + L + L S + RV W+ A K+
Sbjct: 55 YG-SFSRFVDRSFTLHDAQVLDTLHFK----LGKTSCGTGDIRV--WIKTAEKSCLRELI 107
Query: 119 -KIEKLNLSLHEVIFILPDCLFAS-KSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITF 176
+I+K N V+ LP L+ + L LKL ++ S F LKTL L + F
Sbjct: 108 IEIDKSNSDNSSVV--LPRSLYTCCRMLVTLKLNNAVLVDATSSFSFPSLKTLSLVSMKF 165
Query: 177 EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLI--------IDYDCSYPD 228
G+ + L CPVLE L++ C + N+ ++ + SL+ L+ I+ DC +
Sbjct: 166 PGDELIKMLLSNCPVLEDLVVKRCPYDNVTTFTVRVSSLKCLVLHETELASINADCGFVI 225
Query: 229 DF--LDCV-VEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV-QLFGALHNLKLLYV 284
D L+C+ +E + + + ++CN +YV QL G++ ++K LYV
Sbjct: 226 DTPSLECLDIEDGRGGFCVIENNMTKVVKANVCN------SYVHTQQLMGSISSVKRLYV 279
Query: 285 -------------L*NCLVDFRV--*NPLHFRIIPLSLQKSPNLESLNFFE------FDP 323
+ +CLV + ++ L+ SP L L + P
Sbjct: 280 CIPSSKDAYPVGSVFHCLVRLTICTCETEWLNLLMCVLRDSPKLRELKLVKNHVYRSHQP 339
Query: 324 NICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
C+ S VP C L+T + G E + ++L + + L++ I
Sbjct: 340 RPCW----NEPSAVPECLLTSLETLEWVKYEGTEEEKEVAAFILRSGSCLKKVTI 390
>AT1G51370.1 | Symbols: | F-box family protein |
chr1:19045615-19047141 FORWARD
Length = 435
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 177/418 (42%), Gaps = 74/418 (17%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D IS LP+ ++ IL L TKD +RTS LS +W++LW +V LD N
Sbjct: 18 EDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTN----- 72
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
+ + V+S IRKLRL+ + + S W+ AA +I+ L
Sbjct: 73 ----TIVSFVESFFDSHRDSWIRKLRLDLGYHHDKYDLMS-------WIDAATTRRIQHL 121
Query: 124 NLS-LHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWST 182
++ H+ +P ++ +L L+L + VL P + CLK +H + +++ E +
Sbjct: 122 DVHCFHD--NKIPLSIYTCTTLVHLRL-RWAVLTNPEFVSLPCLKIMHFENVSYPNETTL 178
Query: 183 QQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVNL 242
Q+L G PVLE+LIL++ + + + +L+ L I ++F+D V I A L
Sbjct: 179 QKLISGSPVLEELILFSTMYPKGNVLQLRSDTLKRLDI-------NEFIDVV--IYAPLL 229
Query: 243 TSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGALHNLKLLYVL*NCLVD----------- 291
L Y + +SS A +D+ + V+ + L+D
Sbjct: 230 QCLRAKMYSTKNFQI--ISSGFPAKLDIDFVNTGGRYQKKKVIEDILIDISRVRDLVISS 287
Query: 292 -----------------FRV*NPLHFR-------IIPLSLQKSPNLESLNFFEFDPNICF 327
FR + L+ R ++P L+ P LESL E N
Sbjct: 288 NTWKEFFLYSKSRPLLQFRYISHLNARFYISDLEMLPTLLESCPKLESL-ILEMVKNQST 346
Query: 328 IGEGG------ISSNVPHCFKHRLKTFFIS-NFSGNAAEIHLMRYLLENATVLERTRI 378
G + S VP C LK + + E+ L+RY+L N+TVL++ R+
Sbjct: 347 RRHGEKREPNVMVSTVPWCLVSSLKFVELKRSIPRYEGEMELVRYVLTNSTVLKKLRL 404
>AT3G44810.1 | Symbols: | F-box family protein |
chr3:16358496-16359983 REVERSE
Length = 448
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 124/268 (46%), Gaps = 15/268 (5%)
Query: 10 LPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCN--CTSKQTVEVRY 67
LPD++L +LS L TK TS LSKRW+ L+ +LDF + + + + +V+
Sbjct: 12 LPDELLVHVLSSLETKQAASTSVLSKRWRTLFAVRRNLDFDDSIISHPEVGEQNMDDVQE 71
Query: 68 SFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLNLSL 127
SF VD L F+ I K L + K RV W+ AL++ + +L+L L
Sbjct: 72 SFRDFVDKRLAFQGSVPINKFSL-------IYGDKHDDVRVDRWINTALEHGVSELHLCL 124
Query: 128 HEV---IFILPDCLFASKSLCKLKL-TMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQ 183
V + P +F S +L KL L T ++ P C LK L L I F+ +
Sbjct: 125 TSVTRRLHRFPSNVFRSTTLVKLTLGTNLFIVYFPSDTCLPVLKILVLDSIWFDRIKFSN 184
Query: 184 QLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVNLT 243
L GCP LE L + + + + ++ ++++L I Y S D+ V + NL
Sbjct: 185 VLLAGCPALEDLTIDQKSFPGLPNV-VSSKTVKSLSIVYKYSADFDWFRTVA-LDTPNLV 242
Query: 244 SLNCTNYLIFELSLCNLSSLVYAYVDVQ 271
+L + Y CNL SLV A +D+
Sbjct: 243 TLLYSTYARHRYRHCNLESLVNATLDLH 270
>AT5G50270.1 | Symbols: | F-box family protein |
chr5:20457487-20458873 FORWARD
Length = 381
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 170/383 (44%), Gaps = 32/383 (8%)
Query: 5 DIISNLPDDILGCILSFLPT-KDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
D IS LPD++L +LS LP KDV+ T LSKRW+ LW+ V L + + S Q +
Sbjct: 2 DRISGLPDELLLRVLSLLPNVKDVVVTMVLSKRWQFLWMMVPKLVYDD-------SYQNL 54
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
E F + VD +L R+ I L + ++ W R C + I ++
Sbjct: 55 EYG-KFSRFVDRSLFMRKAPGIETLHFKLGQNCGNGDIQ-WWIRAASKFC--FRELIIEI 110
Query: 124 NLSLHEVIFILPDCLFAS-KSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWST 182
N S ILP L+ + L LKL ++ V CF LK L L + + G
Sbjct: 111 NCSTSASPSILPRSLYTECRMLVTLKLKKAVLVDVSSPTCFPSLKNLSLVSVKYPGNEFV 170
Query: 183 QQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCS-YPDDFLDCVVEISAVN 241
+ L C VLE L++ C N+ S+ +PSL++L++ PD VVE ++
Sbjct: 171 KSLLSSCHVLEDLVVEQCINDNVTIFSVKVPSLKSLVLRTSKERAPDGESGFVVEAPSLE 230
Query: 242 LTSLNCT-NYLIFELSLCNLSSLVYAYVDVQLFGALHNLKLLYVL*NCL------VDFRV 294
++ T + + E + NL+ AYV V LH+ +Y + C+ +
Sbjct: 231 YLDIDQTGGFCVIENGMPNLAE---AYVSV-----LHHHPDMYPI-RCVFHRLVHITLCT 281
Query: 295 *NPLHFRIIPLSLQKSPNLESLNFFEFDPN-ICFIGE-GGISSNVPHCFKHRLKTFFISN 352
+ ++ L+ SP L SL + + IC S+VP C L+T +
Sbjct: 282 CDDEWLNLLACLLKGSPKLISLKLEKHHGHLICSPSPLRDDLSSVPECVLSSLETVEWVD 341
Query: 353 FSGNAAEIHLMRYLLENATVLER 375
+ G AE L+ ++L N + L++
Sbjct: 342 YEGTEAERQLVEFILRNGSCLKK 364
>AT5G56370.2 | Symbols: | F-box family protein |
chr5:22836200-22837619 REVERSE
Length = 421
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 28/271 (10%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS LPDD L ILS LPTKDV+ TS LSKRW++LW V L + + + N
Sbjct: 2 DSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQY-SLIDKNADHG---- 56
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
+F++ VD +LL + L L+ + + WV A++ + +L+
Sbjct: 57 ---TFVRFVDRSLLLSMAPVLESLHLK-------LGRQCSEVDIGFWVRIAVEKGLCELD 106
Query: 125 LSLHEVIFI---LPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWS 181
LP LF +L LKL + V +CF LKTLHL+Y+ F + +
Sbjct: 107 FDYEHYKTEPCRLPQSLFTCGTLTVLKLKNVSLKDVQFPVCFKLLKTLHLEYVIFLDKET 166
Query: 182 TQQLFLGCPVLE--KLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISA 239
Q+L CP+LE L + N+ S+ +PSL+ I C + V+ +
Sbjct: 167 PQKLLSSCPILEVFDLTRDDDDVDNVMSFSVMVPSLQRFIY---CG--GSGAELVMNTPS 221
Query: 240 VNLTSLNCTNYLIFELSLCNLSSLVYAYVDV 270
+ L+ Y E + NL +V A+V+V
Sbjct: 222 LKYLKLSGCGY---ECMIGNLPEIVEAHVEV 249
>AT5G56370.1 | Symbols: | F-box family protein |
chr5:22836200-22837619 REVERSE
Length = 421
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 28/271 (10%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS LPDD L ILS LPTKDV+ TS LSKRW++LW V L + + + N
Sbjct: 2 DSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQY-SLIDKNADHG---- 56
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
+F++ VD +LL + L L+ + + WV A++ + +L+
Sbjct: 57 ---TFVRFVDRSLLLSMAPVLESLHLK-------LGRQCSEVDIGFWVRIAVEKGLCELD 106
Query: 125 LSLHEVIFI---LPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWS 181
LP LF +L LKL + V +CF LKTLHL+Y+ F + +
Sbjct: 107 FDYEHYKTEPCRLPQSLFTCGTLTVLKLKNVSLKDVQFPVCFKLLKTLHLEYVIFLDKET 166
Query: 182 TQQLFLGCPVLE--KLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISA 239
Q+L CP+LE L + N+ S+ +PSL+ I C + V+ +
Sbjct: 167 PQKLLSSCPILEVFDLTRDDDDVDNVMSFSVMVPSLQRFIY---CG--GSGAELVMNTPS 221
Query: 240 VNLTSLNCTNYLIFELSLCNLSSLVYAYVDV 270
+ L+ Y E + NL +V A+V+V
Sbjct: 222 LKYLKLSGCGY---ECMIGNLPEIVEAHVEV 249
>AT1G55660.1 | Symbols: | F-box family protein |
chr1:20800694-20802340 FORWARD
Length = 492
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 14/220 (6%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS LPD++L +LSFL TKD + TS LS RWK LW+ + L++ + +V
Sbjct: 53 DKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFR-------HYSVS 105
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALK-NKIEKL 123
+ + S+L + I L L+ R G S+K + +WV A+ + + +L
Sbjct: 106 EGQGLARFITSSLRVHKAPAIESLSLKFRYGAIG-SIKP--KDIYLWVSLAVHVSNVREL 162
Query: 124 NLSL---HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
+L L E+ LP L KS+ LKL ++ VP +C LKTL L +T+
Sbjct: 163 SLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDAN 222
Query: 181 STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLII 220
S +L CPVLE L++ N+ ++S+ + SL+ L +
Sbjct: 223 SLHRLLSNCPVLEDLVMERDKIDNLGKLSVIVKSLQRLTL 262
>AT3G03360.1 | Symbols: | F-box family protein | chr3:795218-796918
FORWARD
Length = 481
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 132/293 (45%), Gaps = 24/293 (8%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF-KNKLGCNCTSKQ 61
D+IS LPDDIL ILS+LPT+ I+TS LS+RW+H+W L F +++ C ++
Sbjct: 35 AGDLISRLPDDILQLILSYLPTRLAIKTSVLSRRWRHVWSDTWSLSFHRDRPDAPCINR- 93
Query: 62 TVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
+ RY K++ FR C R + S + W+ A+ +E
Sbjct: 94 -ILDRYRAPKMMS----FRICSCCRA---------ACISRPDTHADIDSWINFAMSRNVE 139
Query: 122 KLNLSLHEVIFILPDCLFASKSLCKLKLTMYC-----VLRVPGSICFSCLKTLHLKYITF 176
L+L L E + +P+ L+ + SL +L L C L S+ ++ LK L L +
Sbjct: 140 NLSLYLDEDKYDIPEFLYINSSLKQLYLDFGCKKDFISLNPKCSVSWTSLKNLSLYHCNI 199
Query: 177 EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSY-PDDFLDCVV 235
E S + GCP+LE L+L+ C + +S + P L TL I C P + +
Sbjct: 200 SDE-SIAIILSGCPILESLLLFFCKKLKVLDLSKS-PRLITLEITRRCRMEPTQLVAPHI 257
Query: 236 EISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGALHNLKLLYVL*NC 288
+ + C + LS L YA VD +L H ++ +L C
Sbjct: 258 RCLRLINSEKPCALVDVSSLSQAELDITAYAIVDNKLEADFHQTMVVKMLEKC 310
>AT5G18780.1 | Symbols: | F-box family protein |
chr5:6264610-6266097 FORWARD
Length = 441
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 179/438 (40%), Gaps = 75/438 (17%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
G G+D IS LP+ +L ILSFL TKD +RTS LS RW+ LW+ V LD K
Sbjct: 7 GSGEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDL---------DK 57
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
VD L FR +R +L + S T+ C ++
Sbjct: 58 SDFSDDNPSASFVDKFLNFRGESYLRGFKLNTDHDVYDIS--------TLDACLM---RL 106
Query: 121 EKLNLSLHEV-------IFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKY 173
+K + E+ I ++P + +L LKL+ + +L GS+ CL+ +H +
Sbjct: 107 DKCKIQHFEIENCFGFCILLMPLIIPMCHTLVSLKLS-FVILSKFGSLSLPCLEIMHFEK 165
Query: 174 ITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLII---DYDCSYPDDF 230
+ F + S + L PVL L + G + + + SL++ + D+D ++
Sbjct: 166 VIFPSDKSAEVLIACSPVLRDLRISQSGDDAVEVLRVCSASLKSFTLKRTDHDYVGNGEY 225
Query: 231 LDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV--QLFGAL------------ 276
V I L LN +Y + ++S V +VDV ++ G
Sbjct: 226 ---TVVIDTPRLEYLNLKDYQCQGFKIVSMSEYVRVHVDVVFEVIGGTVLSKRNIICDFL 282
Query: 277 -------------HNLKLLYVL*NCLVDFRV*NPLHFR----------IIPLSLQKSPNL 313
+L+ +Y F+ + R ++P+ L+ PNL
Sbjct: 283 SCVSNVRYMTISRRSLEFIYRHLELKPRFKFHDLARLRATMFSNSSPEMLPVILETCPNL 342
Query: 314 ESLNFFEFDPNICFIGEGGISSNVPHCFKHRLKTFFI-SNFSGNAAEIHLMRYLLENATV 372
+ L ++ G G+ + +P C L + I S + A E+ L+ YLLEN+T
Sbjct: 343 KHLTLELVHDSLVTEGTSGLLTVLPRCLISSLASVDIESPITDKATELKLVSYLLENSTT 402
Query: 373 LERTRIVCVQMYQKTRRK 390
L++ + +++ Q R K
Sbjct: 403 LKK---LVLRLNQSCRDK 417
>AT2G26860.2 | Symbols: | F-box family protein |
chr2:11452421-11453584 REVERSE
Length = 355
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 109/232 (46%), Gaps = 26/232 (11%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF-KNKLGCNCTSKQTV 63
D IS LPD++L IL LPTK+V+ TS LSKRW+ LW+ V L F N + + +
Sbjct: 2 DRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTFVMNHYESDLPIQDFI 61
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
LK P I L+ FS + WV + ++ +L
Sbjct: 62 TKNLRLLK----------PQVIESFHLQ------CFSSSFKPEDIKHWVVTTISRRVREL 105
Query: 124 -----NLSLHE---VIFILPDCLFASKSLCKLKLTMYCVL-RVPGSICFSCLKTLHLKYI 174
+LS + V+ LP+ L+ SL LKL + ++ VP ++ CLKTL L +
Sbjct: 106 IINYCDLSWLDKPVVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPRTVSLPCLKTLELDSV 165
Query: 175 TFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSY 226
+ E S + L CPVLE L ++ N++ + I +PSL L + D +Y
Sbjct: 166 AYSNEESLRLLLSYCPVLEDLTIHRDMHDNVKTLVIIVPSLLRLNLPIDGAY 217
>AT2G26860.1 | Symbols: | F-box family protein |
chr2:11452196-11453584 REVERSE
Length = 405
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 109/232 (46%), Gaps = 26/232 (11%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF-KNKLGCNCTSKQTV 63
D IS LPD++L IL LPTK+V+ TS LSKRW+ LW+ V L F N + + +
Sbjct: 2 DRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTFVMNHYESDLPIQDFI 61
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
LK P I L+ FS + WV + ++ +L
Sbjct: 62 TKNLRLLK----------PQVIESFHLQ------CFSSSFKPEDIKHWVVTTISRRVREL 105
Query: 124 -----NLSLHE---VIFILPDCLFASKSLCKLKLTMYCVL-RVPGSICFSCLKTLHLKYI 174
+LS + V+ LP+ L+ SL LKL + ++ VP ++ CLKTL L +
Sbjct: 106 IINYCDLSWLDKPVVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPRTVSLPCLKTLELDSV 165
Query: 175 TFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSY 226
+ E S + L CPVLE L ++ N++ + I +PSL L + D +Y
Sbjct: 166 AYSNEESLRLLLSYCPVLEDLTIHRDMHDNVKTLVIIVPSLLRLNLPIDGAY 217
>AT1G66290.1 | Symbols: | F-box family protein |
chr1:24713306-24714843 REVERSE
Length = 453
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 130/276 (47%), Gaps = 25/276 (9%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
G D IS+LP+ ++ +L LPTKDVI+TS LS +W+++W V LD N+ S
Sbjct: 25 GDEVDWISDLPEALIVLVLLNLPTKDVIKTSVLSTKWRNIWRYVPRLDLDNRHFTEFDSL 84
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSG---FSVKSWMFRVTMWVCAALK 117
+ R+ R + K +L L G + SW W+ A+K
Sbjct: 85 ASFIDRF-----------MRSNRKVNKFKLRCGSDLDGDVDLATCSW-----KWIYMAIK 128
Query: 118 NKIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFE 177
K++ ++++ V I P+ ++ +SL LKL+ + + P + LK L L ++ F
Sbjct: 129 RKVQHIDVTWPGV-RIYPE-IYNCESLVSLKLSEVTLTK-PEFVSLPSLKVLVLDWVEFY 185
Query: 178 GEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFL-DCVVE 236
E++ L GCPVLE L N+R + + SL L +Y S F D VV
Sbjct: 186 NEFAFDMLMSGCPVLESFTLCRRYLDNVRVLRVISQSL--LSFNYYGSSSKSFRDDLVVI 243
Query: 237 ISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL 272
+ A L L ++ L + NLSSLV A +D++
Sbjct: 244 LDAPKLEKLKLSHQLTASFIIENLSSLVEADIDIEF 279
>AT3G51530.1 | Symbols: | F-box family protein |
chr3:19112873-19114497 REVERSE
Length = 455
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 170/413 (41%), Gaps = 66/413 (15%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
+D IS LP+ +L ILS LPTK VI TS LSKRW LW V L+F++
Sbjct: 28 SEDRISELPEVLLLQILSSLPTKLVISTSVLSKRWLSLWKMVQRLEFESSRNI------- 80
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
Y F + V +LL + + L L+ G V +W A + +
Sbjct: 81 ----YDFAENVTRSLLSHKAPVLESLHLKVGDQFDGVY-------VGVWATIAFTRHVRE 129
Query: 123 LNLSL---HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGE 179
L L H P LF +L LKL Y + VP + L+TLHL + ++G+
Sbjct: 130 FVLDLSSYHGPRVRFPTSLFCFDTLETLKLD-YVYIYVPCPVSMKSLRTLHLLSVVYKGD 188
Query: 180 WSTQQLFLGCPVLEKLILYNC-GWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEIS 238
S LF CP LE L+L + + I PSL+TL++ S + V++
Sbjct: 189 ESGHNLFASCPNLEHLVLRRGFFFDAVVNFIIDAPSLKTLLLSDPFSARESSRGYVIKAP 248
Query: 239 A---VNLTSLNCTNYLIFELSLCNLSSLVYA-------YVDVQLFGALHN---------- 278
+ + + S+ Y + E N++ LV A V+ + G+L +
Sbjct: 249 SLKYLGIESVEGFEYFLIE----NVTELVEANIRNVSKIVNENILGSLKSAKRLSLDLSP 304
Query: 279 LKLLY---VL*NCLV--DFRV*NPLHFRIIPLSLQKSPNLESLNF---------FEFDPN 324
LK+ Y V+ + LV + + ++ L SP L+ L EFD
Sbjct: 305 LKITYPTEVMYHQLVYLEMHTHKVEWWNLLTHMLDSSPKLQVLKLIDRETRHENLEFDKK 364
Query: 325 ICFIGEGGISSNVPHCFKHRLKTFFISNFS-GNAAEIHLMRYLLENATVLERT 376
G+ VP C L+TF N + G E + Y+L NA L++
Sbjct: 365 YKDQGKWNQPKYVPEC----LETFMWRNCNWGREEEKEVATYILRNARQLKKA 413
>AT4G00320.1 | Symbols: | F-box family protein | chr4:139939-141643
FORWARD
Length = 507
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 112/235 (47%), Gaps = 30/235 (12%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKN--KLGCNCTSKQ 61
+D IS LPD ++ ILSFLPTK T+ L+KRWK L + +LDF + T ++
Sbjct: 12 RDGISGLPDAMICHILSFLPTKVAASTTVLAKRWKPLLAFMPNLDFDESFRFDPRMTCEE 71
Query: 62 TVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFR---VTMWVCAALKN 118
+ SF+ +VDS L L+ E L+ F VK V W+ LK
Sbjct: 72 RRKGSESFMLVVDSVL---------ALQAEANATLNKFYVKCEGVEQNSVLEWIPKVLKR 122
Query: 119 KIEKLNLSL--------HEVIFILPDCLFASKSLCKLKLTMY--CVLRVPGSICFSCLKT 168
+ ++L + + + LP +F SK+L +LK+ + V G + LKT
Sbjct: 123 GVLDIDLQIPSSRGFGSNSTFYPLPSEIFVSKTLVRLKIQFQDGANVNVEGDVSLPMLKT 182
Query: 169 LHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRR-----ISIAIPSLRTL 218
LHL Y+ + Q+L GC LE+L+L N WK +S+++ +L+ L
Sbjct: 183 LHLDYVKMDTRM-LQKLLSGCHTLEELLLMNLIWKESSEPEPCFVSVSVRTLKIL 236
>AT2G04230.1 | Symbols: | F-box family protein |
chr2:1447025-1448678 REVERSE
Length = 448
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
+D IS+LPD +L ILS LPT++ I TS LSKRW+ LW + L F +
Sbjct: 11 NEDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVFDDDNI 70
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+S + V L + + L L F ++ V +W+ A + K
Sbjct: 71 DPTMFS--ENVYKTLSLHKAPVLESLHL-------SFEGRTDCLHVGIWIATAFARGVRK 121
Query: 123 LNLS---LHEVIFILPDCLFA-SKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEG 178
L L + LP LF+ + SL LKL L P +C L+ L+L + F+
Sbjct: 122 LVLDSFYQEDQTVTLPSVLFSYNDSLEILKLKCAIDLDFPSRVCLKSLRKLYLDQVHFKD 181
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEIS 238
E S L GCP L+ L+++ ++ +IA PSL+ L I+ D + + I+
Sbjct: 182 EESVCNLLCGCPSLQDLVVHRYSNADVATFTIASPSLQRLTIE-DLRQEGGYGNGSYVIN 240
Query: 239 AVNLTSLNCTNYLIFE 254
A L LN + E
Sbjct: 241 APGLKYLNINGVIDIE 256
>AT1G78760.1 | Symbols: | F-box family protein |
chr1:29615174-29616738 REVERSE
Length = 452
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 183/415 (44%), Gaps = 64/415 (15%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D +SNLP+ ++ I+ +PTKDV+++S LSKRW++LW V G N Q +
Sbjct: 15 EDRLSNLPESLICQIMLNIPTKDVVKSSVLSKRWRNLWRYVP--------GLNVEYNQFL 66
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRL-----EPRMPLSGFSVKSWMFRVTMWVCAALKN 118
+ +F+ VD L C + RL E +S VK W + + V LK
Sbjct: 67 DYN-AFVSFVDRFLALDRESCFQSFRLRYDCDEEERTISN--VKRW---INIVVDQKLK- 119
Query: 119 KIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEG 178
++ L+ + +P ++ +SL LKL +L P I +K + L + F
Sbjct: 120 VLDVLDYTWGNEEVQIPPSVYTCESLVSLKLC-NVILPNPKVISLPLVKVIELDIVKFSN 178
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEIS 238
+++ C LE LI+ +I + ++ SL + +CS D + + V I
Sbjct: 179 ALVLEKIISSCSALESLIISRSSVDDINVLRVSSRSLLSFKHIGNCS--DGWDELEVAID 236
Query: 239 AVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV---------------------------- 270
A L LN +++ + + N SLV A +++
Sbjct: 237 APKLEYLNISDHSTAKFKMKNSGSLVEAKINIIFNMEELPHPNDRPKRKMIQDFLAEISS 296
Query: 271 --QLFGALHNLKLLYVL*NCLVDFRV*NPLH-------FRIIPLSLQKSPNLESLNFFEF 321
+LF + H L++++ L L FR + LH +++ LQ PN++SL EF
Sbjct: 297 VKKLFISSHTLEVIHDLGCELPLFRNLSSLHIDFEDHTLKMLSTFLQSCPNVKSL-VVEF 355
Query: 322 DPNICFIGEGGISSNVPHCFKHRLKTFFISN-FSGNAAEIHLMRYLLENATVLER 375
+ G+ +S +P CF L+ I +G A + ++ Y+LEN+ +L++
Sbjct: 356 KDSSKEDGDRVLS--IPRCFFTTLEYVKIERPITGEARGMKVVSYILENSPILKK 408
>AT5G60610.1 | Symbols: | F-box family protein |
chr5:24364049-24365386 FORWARD
Length = 388
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 184/414 (44%), Gaps = 69/414 (16%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS LPD++L I+SF+PTK + TS LSKRW+ LW V KL C+CT
Sbjct: 2 DRISGLPDELLVKIISFVPTKVAVSTSILSKRWESLWKWVP------KLECDCT------ 49
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLS---GFSVKSWMFR-VTMWVCAALKNKI 120
+ AL + ++ L L+ R+ S F +S++F+ + +W A+ + +
Sbjct: 50 ---------EPAL---RDFILKNLPLQARIIESLYLRFRRESFLFQDIKLWGGIAISHCL 97
Query: 121 EKLNLSL----HEVIFILPDCLFASKSLCKLKLTMYCV-LRVPGSICFSCLKTLHLKYIT 175
+L + ILP L+ KSL LKL + + VP +C LKTL L+ +
Sbjct: 98 RELRIDFFSHYANPYVILPRSLYTCKSLVTLKLLGLGIRVDVPRDVCLPSLKTLLLQCVA 157
Query: 176 FEGEWSTQQLFLGCPVLEKLIL-YNCGWKNIRRISIAIPSLRTLIIDYDCSYPDD-FLDC 233
+ E + L CPVLE L++ + +N++ + + +P+L+ L + S D+ +L
Sbjct: 158 YSEEDPLRLLLSCCPVLEDLVIELDDANQNVKALVVIVPTLQCLSLKIPASCSDERYLIV 217
Query: 234 VVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV-----QLFGALHNLKLLYV--L* 286
+ + + IF + N+ L A + V L ++ ++K L + L
Sbjct: 218 TPSLKYFKVED----DREIFNALIENMPELEEADIYVTQHIETLLESVTSVKRLTLRQLY 273
Query: 287 NCLVDFRV*NPLHF----------------RIIPLSLQKSPNLESLNFFEFDPNICFIGE 330
N + +++ + F +++ LQ SPNL LN + D + E
Sbjct: 274 NSIDEYKCRAGIVFKQLEQLELSICSDNWTKLVIWLLQNSPNLRVLN-LDADSDYERYEE 332
Query: 331 ------GGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
I +VP C K LKT + ++ E + ++ + A L+ + I
Sbjct: 333 YEQDNWKNIQRSVPKCLKSSLKTLEFAGYTARPEERDFLSFIFKKARCLKTSSI 386
>AT5G62970.1 | Symbols: | F-box family protein |
chr5:25272033-25273537 FORWARD
Length = 449
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 183/430 (42%), Gaps = 79/430 (18%)
Query: 5 DIISNLPDD-ILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
D IS DD +L ILSFLP K I TS LSK+WK LW+ V L++ S +
Sbjct: 2 DKISGFSDDELLVKILSFLPFKFAITTSVLSKQWKFLWMRVPKLEYDED------SMYSF 55
Query: 64 EVRYSFL----KLVDSALLFREPYCI-----RKLR--LEPRMPL-SGFSVKSWMFR---- 107
E + + K VDS E Y I ++R +E +PL S ++S +
Sbjct: 56 EYSFRYFLPKAKEVDS-----ETYSIVSESGHRMRSFIEKNLPLHSSPVIESLRLKFFTE 110
Query: 108 ------VTMWVCAALKNKIEKLNLSL-----HEVIFILPDCLFASKSLCKLKLTMYCVLR 156
+ +WV A+ ++L++ H + LP L+ KSL LKL ++
Sbjct: 111 VFQPEDIKLWVEIAVSRCAQELSVDFFPKEKHNAL--LPRNLYTCKSLVTLKLRNNILVD 168
Query: 157 VPGSICFSCLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLR 216
VP LK LHL+ +T+ S Q+L C VLE L++ N+R++ + IPSL
Sbjct: 169 VPHVFSLPSLKILHLERVTYGDGESLQRLLSNCSVLEDLVVELDTGDNVRKLDVIIPSLL 228
Query: 217 TLIIDYD--CSYPDDFLDC---------------------VVEISAVNLTSLNCTNYLIF 253
+L C+Y +D + ++ N+T+ + L+
Sbjct: 229 SLSFGMSRYCAYEGYRIDTPSLKYFKLTDLSKTFSGLIENMPKLEEANITARHNFKKLLE 288
Query: 254 ELSLCNLSSLVYAYVDVQLFGALHNLKLLYVL*NCL--VDFRV*NPLHFRIIPLSLQKSP 311
++ SL D + A++ +++ N L ++F + N ++ L+ SP
Sbjct: 289 LVTSVKRLSLNIENNDAEALTAIYGDDIVF---NELEHLNFHIHNAYWSELLYWLLKASP 345
Query: 312 NLESLNFFEFDPNICFIGEGGI-------SSNVPHCFKHRLKTFFISNFSGNAAEIHLMR 364
L++L EFD G G ++VP C L+TF S + G+ L
Sbjct: 346 KLQNL---EFDEQCSRDGTMGTLAVFWNQPNSVPQCLLSTLQTFEWSGYPGSVQGKDLAT 402
Query: 365 YLLENATVLE 374
Y+L + L+
Sbjct: 403 YILRKSRQLK 412
>AT1G51370.2 | Symbols: | F-box family protein |
chr1:19045615-19046748 FORWARD
Length = 346
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 27/233 (11%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D IS LP+ ++ IL L TKD +RTS LS +W++LW +V LD N
Sbjct: 18 EDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTN----- 72
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
+ + V+S IRKLRL+ + + S W+ AA +I+ L
Sbjct: 73 ----TIVSFVESFFDSHRDSWIRKLRLDLGYHHDKYDLMS-------WIDAATTRRIQHL 121
Query: 124 NLS-LHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWST 182
++ H+ +P ++ +L L+L + VL P + CLK +H + +++ E +
Sbjct: 122 DVHCFHDN--KIPLSIYTCTTLVHLRL-RWAVLTNPEFVSLPCLKIMHFENVSYPNETTL 178
Query: 183 QQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVV 235
Q+L G PVLE+LIL++ + + + +L+ L I ++F+D V+
Sbjct: 179 QKLISGSPVLEELILFSTMYPKGNVLQLRSDTLKRLDI-------NEFIDVVI 224
>AT3G58930.1 | Symbols: | F-box family protein |
chr3:21778381-21780014 REVERSE
Length = 482
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 42/288 (14%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLW--ITVSDLDFKNKLGCNCTSKQT 62
D +SNLPD + G ILSFLP K + TS LSK W +LW I + D+D L +
Sbjct: 2 DRVSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAER 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMF----RVTMWVCAALKN 118
+E+R SF+ VD R L L+ P+ FS+K V W+C L+
Sbjct: 62 LEIRQSFVDFVD-----------RVLALQDDSPIDRFSLKCITGIHPDHVNRWICNVLQR 110
Query: 119 KIEKLNL-------SLHEVIFILPDCLFASKSLCKLKL------TMYCVLRVPGSICFSC 165
+ L+L E +LP +F SK+L KLK+ +C G
Sbjct: 111 GVSDLDLFIDFSYEDTQEDEDMLPQEMFVSKTLVKLKIRNDRCVDWWC---GKGGTSLPM 167
Query: 166 LKTLHLKYITFEGEWSTQQLFLGC-PVLEKLILYNCGWKNIRRISIAIPSLRTL-IIDYD 223
LK+L++ W + FL PVLE+L + + WK +++ SLR L I+
Sbjct: 168 LKSLYIDSDLI--LWGKMKRFLSSFPVLEELRMASMEWKESHE-TVSSASLRKLSILGTG 224
Query: 224 CSYPDDFLDC-VVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV 270
C +D+++ + +L LN ++ + + L N+ L+ A +++
Sbjct: 225 C---EDYVNPKSISFDTPSLLYLNYSDLVAEDYPLVNMGKLLEARINL 269
>AT1G16930.1 | Symbols: | F-box family protein |
chr1:5789987-5791534 FORWARD
Length = 449
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 176/433 (40%), Gaps = 83/433 (19%)
Query: 2 RGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQ 61
R D ISNLPD +L ILS L TK+ + TS LSKRW++LW+ V LD L N
Sbjct: 12 RNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLD----LDSNNFPDD 67
Query: 62 TVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
V F+ V+ L + + +L + S R W+ A +K ++
Sbjct: 68 DV-----FVSFVNRFLGSENEQHLERFKLIYEVNEHDAS------RFKSWINAVIKRRVC 116
Query: 122 KLN----LSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFE 177
N + + + +P L++ + L L+L L P S+ C+K +HL + ++
Sbjct: 117 HFNVHNEVDDDDELVKMPLSLYSCERLVNLQL-YRVALDHPESVSLPCVKIMHLDMVKYD 175
Query: 178 GEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEI 237
+ + + L GCPVLE+L + ++ + + SL++ ID S + + VV I
Sbjct: 176 ADSTLEILISGCPVLEELTIVRDPNDSLEVVCVRSQSLKSFKID---SERYESQNHVVTI 232
Query: 238 SAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGALHNLKLL--------------- 282
A L +N ++ + N+ +DV +F +N L
Sbjct: 233 DAPRLEYMNLCDHRSDSFIIHNIGPFAKVDIDV-IFNVEYNDPLEPDDSSKIAMLGKFLT 291
Query: 283 --------------------YVL*NCLVDFRV*NPLH-------FRIIPLSLQKSPNLES 315
Y L F + LH + ++P L+ PNL S
Sbjct: 292 GLSTVSEMVISSDTLQVIHDYCKMEQLPQFSNLSRLHAYFEDTWWEMLPTFLESFPNLHS 351
Query: 316 LNFFEFDPNICFIGEGGIS-SNVPHCFKH-----RLKTFFISNF-------SGNAAEIHL 362
L EFD CF I S VP CF LKT ++ N +G +++ L
Sbjct: 352 L-VMEFD---CFPDTEQIDLSYVPQCFLSSLEFVHLKTPYVVNMQKEGRPLTGTSSKRKL 407
Query: 363 MRYLLENATVLER 375
+Y LEN L++
Sbjct: 408 AKYFLENGAALKK 420
>AT1G66300.1 | Symbols: | F-box family protein |
chr1:24716497-24718050 REVERSE
Length = 456
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 184/436 (42%), Gaps = 70/436 (16%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
G D + +LP+ ++ +L L TKDVI+ LS +W++LW V LD L C+ ++
Sbjct: 25 GYEVDWVRDLPESLICHVLLNLSTKDVIKNCVLSTKWRYLWRYVPGLD----LDCSDFTE 80
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
+F+ VD L + K +L L G ++ ++ W+ +K K+
Sbjct: 81 YN-----TFVSFVDRFLSTNTESYLNKFKLGFDCDLVG-DEETGNAQMARWINDVVKRKV 134
Query: 121 EKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
+ L+L + +P ++ KSL LKL +L +P +C +K + L ++ F +
Sbjct: 135 QHLDLEWGALE--IPPIVYVCKSLVSLKLCG-VILPIPEFVCLPSVKVIVLDWVKFANDL 191
Query: 181 STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAV 240
+ + L GC VL+ L L N++ + + SL + + + ++ + +VEI
Sbjct: 192 ALEMLISGCLVLKSLTLCRSNNDNVKVLRVRSQSLLSFNYNGPNTMGPEYEELIVEIDTP 251
Query: 241 NLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL---FG----------------------A 275
L L ++ + + N SSLV A+++++ FG
Sbjct: 252 KLQDLTLSHRMTASFIIKNRSSLVGAHINIEFNFCFGEKFDPKNLPKREMIRNFLVGISG 311
Query: 276 LHNLKLLYVL*NCLVDFRV*NPL----------------HFRIIPLSLQKSPNLESL--- 316
+ N+ + + D+ PL + ++P L+ PNL+SL
Sbjct: 312 VKNMAIAACTLEVIYDYSRCEPLPLFRNLCLLSVEFYEDRWEMLPFFLESCPNLKSLVVG 371
Query: 317 -NFFEFDPNICFIGEGGISSNVPHCFKHRLKTFFISN-FSGNAAEIHLMRYLLENATVLE 374
N + + G C L+ I +G E+ L+ YLLEN+ +L+
Sbjct: 372 SNRYRMERTSIISGH--------RCLLSSLEYVEIETPLTGEVFEMKLVSYLLENSPILK 423
Query: 375 RTRIVCVQMYQKTRRK 390
+ + + ++ +R+K
Sbjct: 424 K---LTIHLHDNSRKK 436
>AT3G28410.1 | Symbols: | F-box family protein |
chr3:10640152-10642071 REVERSE
Length = 465
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 141/310 (45%), Gaps = 63/310 (20%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLG-CNCT-SK 60
G D I+ +PDDIL ILSF+PT +RTS LS+RW+H+W LD K K G N T +
Sbjct: 26 GADFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDIKLKHGETNQTLTS 85
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
T + SF KLV M L+ +V +V W+ AL +
Sbjct: 86 YTAPIITSF-KLV--------------------MDLNDNTVP----QVDSWIEFALSRNV 120
Query: 121 EKLNLSLHEVIFI----LPDCLFASKSLCKLKLTMYCVLRVPG-SICFSCLKTLHLKYIT 175
+ L++ + + + PD + S SL +L +T+ +P ++ + L+ L L++
Sbjct: 121 QNLSVFVRDFTYTKTYRFPDIFYISSSLKQLDVTLDFFDMIPTCAVSWKSLRNLTLRFCQ 180
Query: 176 FEGEWSTQQLFLGCPVLEKLILYNC---------GWKNIRR------------ISIAIPS 214
E S + GCP+LE L L C N+RR I+I P
Sbjct: 181 IPDE-SMHNILSGCPILESLTLDTCRLLERLDLSKSPNLRRLDINRQYRRTGPIAIVAPH 239
Query: 215 LRTLIIDYDCSYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFG 274
+ L + Y S P +V++S+++ +LN +I + L L++ Y + +++
Sbjct: 240 IYYLRLTY-SSTP----STIVDVSSLSEANLN----IISDRLLSPLTADRYQTMALEMLS 290
Query: 275 ALHNLKLLYV 284
HN+K L V
Sbjct: 291 KFHNVKRLTV 300
>AT4G27050.4 | Symbols: | F-box family protein |
chr4:13575884-13577429 REVERSE
Length = 453
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 184/452 (40%), Gaps = 93/452 (20%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF--------KNKLGCN 56
D+ISNLPDD+LG ILS +PTK TS LSKRW++L V LDF NK G +
Sbjct: 4 DLISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGED 63
Query: 57 CTS--KQTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLS-GFSVKSWM----FRVT 109
S + R+SF VD + L L PL+ FS+K + R+
Sbjct: 64 EASSYESGQRRRHSFSHFVD-----------KTLALLSNAPLTEKFSLKCYHEDDGARIN 112
Query: 110 MWVCAALKNKIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCV----LRVPGSICFSC 165
W+ AL+ +LNL + I F S +L KL ++ L G + F
Sbjct: 113 RWIRTALERGCLELNLEAANYLPI-DSQYFTSNTLVKLTISDGFYPGGHLLPFGGVFFPA 171
Query: 166 LKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCS 225
LKTL L + F GCP LE+L L C W ++ P+++ + I D
Sbjct: 172 LKTLTLVSVCFTSVEMINFFIHGCPALEELFL--CVWMQY----MSSPNVKRVTITSD-- 223
Query: 226 YPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLF-------GALHN 278
+ DD + + +L L+ ++Y+ + L SLV A +D++L+ L N
Sbjct: 224 FDDDIQRPSMVLKTPSLVYLDYSSYVAGNYYVV-LDSLVEARLDLRLYEPIIYDEDGLWN 282
Query: 279 LKLLYVL*NCLVDFRV*NPLH---------------------------------FRIIPL 305
++ + N + R LH + ++P
Sbjct: 283 AEVFGNITNLIEAIRTIKILHLSPSSLEVFYYCCDLPVLEDLVNLSIESDKEKGWEVMPR 342
Query: 306 SLQKSPNLESLNFFEFDPNICF----------IGEGGISSNVPHCFKHRLKTFFISNFSG 355
L KSPNL++L + + + + I S + C R+K I + G
Sbjct: 343 LLNKSPNLQTLVVKGLVHRVTYCCGDACACIRMKDREIVSCLSRC---RVKVLKILGYGG 399
Query: 356 NAAEIHLMRYLLENATVLERTRIVCVQMYQKT 387
+ E+ MR+ L LE ++ + +K+
Sbjct: 400 SFRELKQMRHFLGKLKCLETVKVGVKEGSKKS 431
>AT4G27050.3 | Symbols: | F-box family protein |
chr4:13575884-13577429 REVERSE
Length = 453
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 184/452 (40%), Gaps = 93/452 (20%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF--------KNKLGCN 56
D+ISNLPDD+LG ILS +PTK TS LSKRW++L V LDF NK G +
Sbjct: 4 DLISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGED 63
Query: 57 CTS--KQTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLS-GFSVKSWM----FRVT 109
S + R+SF VD + L L PL+ FS+K + R+
Sbjct: 64 EASSYESGQRRRHSFSHFVD-----------KTLALLSNAPLTEKFSLKCYHEDDGARIN 112
Query: 110 MWVCAALKNKIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCV----LRVPGSICFSC 165
W+ AL+ +LNL + I F S +L KL ++ L G + F
Sbjct: 113 RWIRTALERGCLELNLEAANYLPI-DSQYFTSNTLVKLTISDGFYPGGHLLPFGGVFFPA 171
Query: 166 LKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCS 225
LKTL L + F GCP LE+L L C W ++ P+++ + I D
Sbjct: 172 LKTLTLVSVCFTSVEMINFFIHGCPALEELFL--CVWMQY----MSSPNVKRVTITSD-- 223
Query: 226 YPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLF-------GALHN 278
+ DD + + +L L+ ++Y+ + L SLV A +D++L+ L N
Sbjct: 224 FDDDIQRPSMVLKTPSLVYLDYSSYVAGNYYVV-LDSLVEARLDLRLYEPIIYDEDGLWN 282
Query: 279 LKLLYVL*NCLVDFRV*NPLH---------------------------------FRIIPL 305
++ + N + R LH + ++P
Sbjct: 283 AEVFGNITNLIEAIRTIKILHLSPSSLEVFYYCCDLPVLEDLVNLSIESDKEKGWEVMPR 342
Query: 306 SLQKSPNLESLNFFEFDPNICF----------IGEGGISSNVPHCFKHRLKTFFISNFSG 355
L KSPNL++L + + + + I S + C R+K I + G
Sbjct: 343 LLNKSPNLQTLVVKGLVHRVTYCCGDACACIRMKDREIVSCLSRC---RVKVLKILGYGG 399
Query: 356 NAAEIHLMRYLLENATVLERTRIVCVQMYQKT 387
+ E+ MR+ L LE ++ + +K+
Sbjct: 400 SFRELKQMRHFLGKLKCLETVKVGVKEGSKKS 431
>AT4G27050.2 | Symbols: | F-box family protein |
chr4:13575884-13577429 REVERSE
Length = 453
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 184/452 (40%), Gaps = 93/452 (20%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF--------KNKLGCN 56
D+ISNLPDD+LG ILS +PTK TS LSKRW++L V LDF NK G +
Sbjct: 4 DLISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGED 63
Query: 57 CTS--KQTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLS-GFSVKSWM----FRVT 109
S + R+SF VD + L L PL+ FS+K + R+
Sbjct: 64 EASSYESGQRRRHSFSHFVD-----------KTLALLSNAPLTEKFSLKCYHEDDGARIN 112
Query: 110 MWVCAALKNKIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCV----LRVPGSICFSC 165
W+ AL+ +LNL + I F S +L KL ++ L G + F
Sbjct: 113 RWIRTALERGCLELNLEAANYLPI-DSQYFTSNTLVKLTISDGFYPGGHLLPFGGVFFPA 171
Query: 166 LKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCS 225
LKTL L + F GCP LE+L L C W ++ P+++ + I D
Sbjct: 172 LKTLTLVSVCFTSVEMINFFIHGCPALEELFL--CVWMQY----MSSPNVKRVTITSD-- 223
Query: 226 YPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLF-------GALHN 278
+ DD + + +L L+ ++Y+ + L SLV A +D++L+ L N
Sbjct: 224 FDDDIQRPSMVLKTPSLVYLDYSSYVAGNYYVV-LDSLVEARLDLRLYEPIIYDEDGLWN 282
Query: 279 LKLLYVL*NCLVDFRV*NPLH---------------------------------FRIIPL 305
++ + N + R LH + ++P
Sbjct: 283 AEVFGNITNLIEAIRTIKILHLSPSSLEVFYYCCDLPVLEDLVNLSIESDKEKGWEVMPR 342
Query: 306 SLQKSPNLESLNFFEFDPNICF----------IGEGGISSNVPHCFKHRLKTFFISNFSG 355
L KSPNL++L + + + + I S + C R+K I + G
Sbjct: 343 LLNKSPNLQTLVVKGLVHRVTYCCGDACACIRMKDREIVSCLSRC---RVKVLKILGYGG 399
Query: 356 NAAEIHLMRYLLENATVLERTRIVCVQMYQKT 387
+ E+ MR+ L LE ++ + +K+
Sbjct: 400 SFRELKQMRHFLGKLKCLETVKVGVKEGSKKS 431
>AT4G27050.1 | Symbols: | F-box family protein |
chr4:13575884-13577429 REVERSE
Length = 453
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 184/452 (40%), Gaps = 93/452 (20%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF--------KNKLGCN 56
D+ISNLPDD+LG ILS +PTK TS LSKRW++L V LDF NK G +
Sbjct: 4 DLISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGED 63
Query: 57 CTS--KQTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLS-GFSVKSWM----FRVT 109
S + R+SF VD + L L PL+ FS+K + R+
Sbjct: 64 EASSYESGQRRRHSFSHFVD-----------KTLALLSNAPLTEKFSLKCYHEDDGARIN 112
Query: 110 MWVCAALKNKIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCV----LRVPGSICFSC 165
W+ AL+ +LNL + I F S +L KL ++ L G + F
Sbjct: 113 RWIRTALERGCLELNLEAANYLPI-DSQYFTSNTLVKLTISDGFYPGGHLLPFGGVFFPA 171
Query: 166 LKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCS 225
LKTL L + F GCP LE+L L C W ++ P+++ + I D
Sbjct: 172 LKTLTLVSVCFTSVEMINFFIHGCPALEELFL--CVWMQY----MSSPNVKRVTITSD-- 223
Query: 226 YPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLF-------GALHN 278
+ DD + + +L L+ ++Y+ + L SLV A +D++L+ L N
Sbjct: 224 FDDDIQRPSMVLKTPSLVYLDYSSYVAGNYYVV-LDSLVEARLDLRLYEPIIYDEDGLWN 282
Query: 279 LKLLYVL*NCLVDFRV*NPLH---------------------------------FRIIPL 305
++ + N + R LH + ++P
Sbjct: 283 AEVFGNITNLIEAIRTIKILHLSPSSLEVFYYCCDLPVLEDLVNLSIESDKEKGWEVMPR 342
Query: 306 SLQKSPNLESLNFFEFDPNICF----------IGEGGISSNVPHCFKHRLKTFFISNFSG 355
L KSPNL++L + + + + I S + C R+K I + G
Sbjct: 343 LLNKSPNLQTLVVKGLVHRVTYCCGDACACIRMKDREIVSCLSRC---RVKVLKILGYGG 399
Query: 356 NAAEIHLMRYLLENATVLERTRIVCVQMYQKT 387
+ E+ MR+ L LE ++ + +K+
Sbjct: 400 SFRELKQMRHFLGKLKCLETVKVGVKEGSKKS 431
>AT3G44090.1 | Symbols: | F-box family protein |
chr3:15839123-15840759 FORWARD
Length = 449
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 169/404 (41%), Gaps = 66/404 (16%)
Query: 10 LPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQ----TVEV 65
LPDD+L IL FLPTK+ I TS LSKRW+ L+ V +LD + + + + ++
Sbjct: 29 LPDDLLVQILYFLPTKEAISTSLLSKRWRTLYSLVHNLDLDDYIFWHHEDGYNQYFSNDI 88
Query: 66 RYSFLKLVDSALLFREPYCIRKLRLEP----RMPLSGFSVKSWMF----RVTMWVCAALK 117
+ SF + ++ L I+ L R S++ W++ + ++W
Sbjct: 89 QKSFEEFMERTLALLGGGHIKTFSLISDEIYRFDHVVDSIRPWLYYNLQKDSLWQ----- 143
Query: 118 NKIEKLNLSLHEVIFILPDCLFASKSLCKLKL-TMYCVLRVPGSICFSCLKTLHLKYITF 176
F P +F S L KL L T R+P LK L L+YI F
Sbjct: 144 --------------FGFPYKVFTSTKLVKLSLGTRLACPRIPQDTSLPVLKVLLLEYIWF 189
Query: 177 EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVE 236
E + CP LE L +++ R I+ +L+ L + + SY D ++
Sbjct: 190 EDNQLSDVFLAACPALEDLTIHHM----FRPFLISSKNLKKLSVTINFSYYVD-RSTILT 244
Query: 237 ISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ-----------------LFGALHNL 279
+ N+ L +++ C+L SL +D+ L + N+
Sbjct: 245 LDTPNVVDLYYSDFPRPIAPHCHLDSLAKVELDLHSLEDDSRQVQNDADVKNLISEIRNV 304
Query: 280 KLLYVL*NCLVDFRV*NPLHFRIIPLSLQKSPNLES-----LNFFEFDPNICFIGEGGIS 334
K L++ + + ++++PL L++SPNL++ LN + F F+G S
Sbjct: 305 KTLHLTYSAVELMLSSKKRDWKVLPLLLERSPNLKTLVLSGLNRYTFGRRHRFVGIQIPS 364
Query: 335 SNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
SN ++K I + G+A E+ + +LL LE ++
Sbjct: 365 SN-------KIKMLSIKQYQGSATELKHISHLLLKMECLELVKV 401
>AT5G53840.1 | Symbols: | F-box family protein (FBL13) |
chr5:21859148-21860672 REVERSE
Length = 444
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 183/422 (43%), Gaps = 59/422 (13%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
G ++ +S LPD ++ ILS L TKD +RTS LS RW++LW V LDF ++
Sbjct: 14 GSEEERLSQLPDHLICVILSHLSTKDAVRTSILSTRWRNLWQLVPVLDFDSR-------- 65
Query: 61 QTVEVR--YSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKN 118
E+R F+ S + I+KLR+ L+G + +T W+ ++
Sbjct: 66 ---ELRSFSEFVSFAGSFFYLHKDSYIQKLRV-CIYDLAG------NYYLTSWIDLVTRH 115
Query: 119 KIEKLNLSLH--EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITF 176
+I+ +++S+ ++P L+ +L LKL+ ++ V + CLK L L ++ F
Sbjct: 116 RIQHIDISVFTCSGFGVIPLSLYTCDTLVHLKLSRVTMVNVEF-VSLPCLKILDLDFVNF 174
Query: 177 EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPD-------- 228
E + ++ PVLE+L + N++ I + +L+ + I +
Sbjct: 175 TNETTLDKIISCSPVLEELTIVKSSEDNVKIIQVRSQTLKRVEIHRRFDRHNGLVIDTPL 234
Query: 229 -DFLDCVVE-ISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGALHNLKLLYVL* 286
FL I ++ +L T + +++L + + L + F + ++ L +
Sbjct: 235 LQFLSIKAHSIKSIEFINLGFTTKVDIDVNLLDPNDLSNRSMTRDFFTTISRVRSLVIRH 294
Query: 287 NCLVD---FRV*NPLH----------------FRIIPLSLQKSPNLESLN--FFEFDPNI 325
+ D + PL ++ L+ P LESL+ +++ N
Sbjct: 295 GTIKDIFHYMELEPLQQFCYLSELSAVCSISNLEMLLNLLKSCPKLESLSLKLVDYEKN- 353
Query: 326 CFIGEGGISSNV-PHCFKHRLKTFFI-SNFSGNAAEIHLMRYLLENATVLERTRIVCVQM 383
E +SS V P C LK + S G E+ + RY LEN+T+LE+ + M
Sbjct: 354 --KKEEVMSSTVPPPCLVSSLKFVKLESQLLGCGTELKVARYFLENSTILEKLTLKIDYM 411
Query: 384 YQ 385
Y+
Sbjct: 412 YK 413
>AT5G22670.1 | Symbols: | F-box family protein |
chr5:7538192-7539685 REVERSE
Length = 443
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 186/436 (42%), Gaps = 74/436 (16%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
+D IS LPDD+L ILS LPTK +RTS LSKRWK ++V L+F N +
Sbjct: 9 SQDSISLLPDDLLCRILSNLPTKVAVRTSVLSKRWKRFSLSVPLLEF------NVSEFHG 62
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSW-MFRVTMWVCAALKNKIE 121
Y F ++V L CI KL+L F K +T W+ A+K K++
Sbjct: 63 Y---YEFARVVHGFLDTSRETCIHKLKL-------AFEKKQHDRSYLTQWIHNAVKRKVQ 112
Query: 122 KLNLSLHEVIF--ILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGE 179
L++ + ++P L+ ++L L+L + + LKT+HL + +
Sbjct: 113 HLDIGRWSYLGQELIPHSLYTCETLVSLRLHNVSLPDF-DHVSLPRLKTMHLIDNIYPND 171
Query: 180 WSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSY----PDDFLDCVV 235
+ L CPVLE L + ++ + + SL++LI+ D DD + V+
Sbjct: 172 ALLENLISSCPVLEDLNVSRDVENIVKVLRVRSLSLKSLILALDGDRYGDIEDDSWEVVI 231
Query: 236 EISAVNLTSLN------------------------------CTNYLIFELSLCNLSSLVY 265
+ ++ SL N+L+ + N + +
Sbjct: 232 DAPRLSYLSLRDDQSKSFVLSSVTSPAKVDIDVTFDVVRSVLKNFLLTRSVVRNFFTRLS 291
Query: 266 AYVDVQLFGALHNLKLLYVL*NCLVDFRV*NPLHFRII---------PLSLQKSPNLES- 315
+ D+ + G + Y+ L F N + F + P L+ PNL+S
Sbjct: 292 SVRDMTMSGTTLKVLSRYMRHEPLPQFP--NMIQFYAVFCNSDLEKLPNFLESCPNLKSL 349
Query: 316 -LNFFEFDPNICFIGEGGISSNVPHCFKHRLKTFFI-SNFSGNAAEIHLMRYLLENATVL 373
L F N I +SS++P C + L+ I + SG AE+ L++Y LEN+ VL
Sbjct: 350 VLELEVFKKNDLLI----LSSSIPKCLRSSLEHVEIHTPISGAEAEMKLVKYFLENSAVL 405
Query: 374 ER--TRIVCVQMYQKT 387
++ ++ C +M +++
Sbjct: 406 KKFTLQLGCKRMDEES 421
>AT5G22660.1 | Symbols: | F-box family protein |
chr5:7536906-7537853 REVERSE
Length = 315
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 22/274 (8%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
G+D IS+LPD +L ILS LPT++ + TS LS RWK LW++ LD + T+ +
Sbjct: 11 GEDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVLDIDIDAFDDATTFIS 70
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
R+ +DS F++ C+ KL++ +M M+ + W+ A+K +I+
Sbjct: 71 FATRF-----LDS---FKDS-CLHKLQISFQMEAVD------MWTIIPWIEDAVKRRIQH 115
Query: 123 LNLS--LHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
L + + +I LP ++ S+SL L+L + + R + LK +HL+ +
Sbjct: 116 LEVDSRIDHMIDTLPLTVYLSESLVSLRLHLVMLHRFVF-VSLPNLKVMHLEENIYSYAE 174
Query: 181 STQQLFLGCPVLEKLILY----NCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVE 236
+ ++ CPVLE L + K +R S ++ SL+ +I C Y DD D V
Sbjct: 175 TMEKFISSCPVLEDLTVVRNVDEATEKVLRVSSQSLNSLKLVIDSSKCWYNDDSDDWKVV 234
Query: 237 ISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV 270
I A L L+ + + NL S A + V
Sbjct: 235 IDAPQLVYLSLKDDQSVSFVINNLCSSAKADIKV 268
>AT5G27750.1 | Symbols: | F-box family protein |
chr5:9828430-9829981 FORWARD
Length = 459
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 15/279 (5%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
G D IS LP+ ++ IL LPTKD ++TS LS RWK+LW+ V LD L C+ +
Sbjct: 3 GFDRISELPESLITQILLCLPTKDSVKTSVLSTRWKNLWLNVPGLD----LTCSDFPFED 58
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLE-PRMPLSGFS--VKSWMFRVTMWVCAALKNK 119
E F+ +D L F ++ ++ R + GF + + + R + A
Sbjct: 59 EEYEQVFINFIDRFLEFNPESRLQTFEVDYKRREIRGFKDRIGTAINRGIRLLDAVSSTM 118
Query: 120 IEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGE 179
+ ++ + +P LF SK+L LKL L PG + CLK + L+ + + G
Sbjct: 119 YWEEECIMYPYLEFMPLNLFTSKTLVTLKLR-DSALNDPGLLSMPCLKFMILREVRWSGT 177
Query: 180 WSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRT-------LIIDYDCSYPDDFLD 232
S ++L GCPVLE L L +I + + +R+ + + Y D
Sbjct: 178 MSLEKLVSGCPVLEDLTLVRTLICHIDDDELPVTRVRSRSLKTFYVPLAYGVGCRSRVPD 237
Query: 233 CVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ 271
V+EI A L ++ + + NL+SL ++++
Sbjct: 238 KVLEIDAPGLENMTLKEDHFDGIVVKNLTSLFMIELNIK 276
>AT3G49020.1 | Symbols: | F-box family protein |
chr3:18169079-18170660 FORWARD
Length = 447
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 178/409 (43%), Gaps = 56/409 (13%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D IS LP+ +L ILS LPT+ VI TS LSK+WK LW V +L F +K
Sbjct: 21 EDRISELPEALLLLILSSLPTETVIATSVLSKQWKSLWKLVPNLKFDSK----------Y 70
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK- 122
Y+F V +L+ + + L L+ K V + + A + K
Sbjct: 71 HYHYTFSDNVFRSLISHKAPVLDSLHLK-------VEDKDDALDVGILIGIAFSRHMRKF 123
Query: 123 -LNLSLHEVIFI-LPDCLFASKSLCKLKLTMYCV-LRVPGSICFSCLKTLHLKYITFEGE 179
L ++L E F+ P + ++ YC+ L P +C L+ L+L ++ F E
Sbjct: 124 VLKITLLEESFVRFPSAWCSCNDTLEILELKYCILLDFPSLVCLKSLRKLYLYHVRFNDE 183
Query: 180 WSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISA 239
S L GCP LE L+++ ++ +IA+PSL+ L I YD Y + V+ +
Sbjct: 184 ESVCNLLCGCPSLEDLVVHRHSTTDVESYTIAVPSLQRLTI-YDDYYGEGVGGYVINAPS 242
Query: 240 VNLTSLNCTNYLIF-------ELSLCNLSSLVYAYVDVQLFGALHNLKLLYVL*NCLVDF 292
+ +++ N L F EL +S+ V+ + + +L + K L + L F
Sbjct: 243 LKYLNIDGFNGLEFCLIEKAPELVEAKISA-VFEIANENIMDSLTSAKCLSL---HLAPF 298
Query: 293 RV*NP---LHFRIIPLSLQ---------------KSPNLESLNF---FEFDPNICFIG-E 330
++ P + ++++ L L+ SP L+ L ++F C +G E
Sbjct: 299 KIKYPTGKIFYQLLSLELRAYSYEWWNLLWFMLDSSPKLQILKLVDPYQFPKEDCSVGWE 358
Query: 331 GGISSNVPHCFKHRLKTFFISNFS-GNAAEIHLMRYLLENATVLERTRI 378
VP C L+TF + + E + Y+L+NA L++ +
Sbjct: 359 WSRPKCVPECLLFHLETFVWTRYEWQREDEKAVATYILKNARCLKKATL 407
>AT3G52670.1 | Symbols: | F-box family protein |
chr3:19525247-19526737 FORWARD
Length = 384
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 160/388 (41%), Gaps = 65/388 (16%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D ++ LP+D++ ILSFLPT+ VI TS LSK+W+ LW V +L+F +
Sbjct: 9 EDRMNQLPEDLILRILSFLPTELVIATSVLSKQWRSLWKLVPNLEFDS------------ 56
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
+ Y I + + +W+ A + +L
Sbjct: 57 -----------------DDYEINPVD------------------IGLWIGIAFARHLREL 81
Query: 124 NLSLH-EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWST 182
L + + F P L +L LKL + + +P + L+TLHL ++++ E S
Sbjct: 82 VLYVAPKQTFTFPSSLCICNTLETLKLILGIHVDIPCPVLLKSLRTLHLDSVSYKDEESI 141
Query: 183 QQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVNL 242
+ L CP+LE L++Y W N+ I +PSL+ L I D + +F + + +
Sbjct: 142 RNLLSSCPILENLVVYEY-WYNVVNFDIEVPSLKRLEI-CDVLHKKEFRRYTINVPCLKY 199
Query: 243 TSLNCTNYLIFELSLCNLSSLVYAY-------VDVQLFGALHNLKLLYVL*NCLVDFRV* 295
+ N FEL L N LV AY + + G+L + K L L +
Sbjct: 200 LRIEGLNK-DFELCL-NAPELVEAYFTKGSLIIADKFLGSLKSAKRLS-LDILALKMHTR 256
Query: 296 NPLHFRIIPLSLQKSPNLESLNFFEFDPNIC---FIGEGGISSN-VPHCFKHRLKTFFIS 351
+ ++ + L SP L+ L + ++ + E VP C L+TF
Sbjct: 257 REEWWNLLTVMLDSSPKLQVLKLIDHTQDVSKDNVVSEKWNEPKYVPECLLSHLETFVWI 316
Query: 352 NFS-GNAAEIHLMRYLLENATVLERTRI 378
+ E + Y+L NA L++ I
Sbjct: 317 RYDWEREEEKEVATYILRNARWLKKGTI 344
>AT1G13570.1 | Symbols: | F-box family protein |
chr1:4642528-4643930 REVERSE
Length = 416
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 123/257 (47%), Gaps = 18/257 (7%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
G D IS+LP I+ IL+ L +D IRTS LS +W++ W T++DL F K C S
Sbjct: 2 GESPDFISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDEK--CVSPSN 59
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
V + ++ + LL + I K +L S K + W+ +N I
Sbjct: 60 DRCVVETNLVRFITGVLLLHQG-PIHKFQL-------STSFKQCRPDIDQWLLFLSRNGI 111
Query: 121 EKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSI-CFSCLKTLHLKYITFEGE 179
++L L L E F +P CLF L L+L +C P FS LK+L+L I E
Sbjct: 112 KELVLKLGEGEFRVPACLFNCLKLTCLELC-HCEFDPPQYFKGFSYLKSLNLHQILVAPE 170
Query: 180 WSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISA 239
+ L GCP+LE L L + + +SI+ P+L L +D + + D FL+ ++ A
Sbjct: 171 -VIESLISGCPLLEFLSL---SYFDSLVLSISAPNLMYLYLDGE--FKDIFLENTPKLVA 224
Query: 240 VNLTSLNCTNYLIFELS 256
++++ + FE S
Sbjct: 225 ISVSMYMHEDVTDFEQS 241
>AT3G49040.1 | Symbols: | F-box family protein |
chr3:18177676-18179339 FORWARD
Length = 415
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 167/391 (42%), Gaps = 41/391 (10%)
Query: 2 RGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQ 61
+D IS L + +L I+S LPTK V+ TS LSKRW+H+W TV +L F +K +
Sbjct: 8 ENEDRISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWKTVQNLKFVSKYHQTFS--- 64
Query: 62 TVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
E Y F +L + P+ + L LE FS + + + V A +
Sbjct: 65 --EDVYRFF------MLHKAPF-LESLDLE-------FSNQLDASDLGILVGIAFARHVR 108
Query: 122 KLNLSLH---------EVIFILPDCLFAS-KSLCKLKLTMYCVLRVPGSICFSCLKTLHL 171
L L L F C++ + K+L L L +L P +C L+ LHL
Sbjct: 109 NLVLDLDYYSNFSQLCAARFPSGLCIYDNNKTLETLTLKHSILLYFPYRVCLKSLRKLHL 168
Query: 172 KYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFL 231
+ F G+ S L GCP L LI++ + + +IA+PSL L I+ D +
Sbjct: 169 YKVHFYGKDSVYNLLCGCPSLRDLIVHRYR-ECMETFTIAVPSLERLTIE-DSGFG---Y 223
Query: 232 DCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGALHNLKLLYVL*NCLVD 291
C I+A +L LN + L + + A V + N +L L +
Sbjct: 224 GCCYVINAPSLKYLNIRRFKYLNSCLIEKAPEL-AEAKVSDVSDIENENILESLTSAKRL 282
Query: 292 FRV*NPLH-FRIIPLSLQKSPNLESLNFFEFDPNIC---FIGEGGISSN-VPHCFKHRLK 346
+PL + ++ L+ SP L+ L + + + IG+ I VP C L+
Sbjct: 283 SIHLSPLEWWNLLTFMLEASPKLQILKLTDLNMSSTKGNQIGQKWIQPKCVPECLLFHLE 342
Query: 347 TFFISNFS-GNAAEIHLMRYLLENATVLERT 376
TF + + E + RY+L N T L++
Sbjct: 343 TFVWTGYEWQRRDEKEVARYILRNTTSLKKA 373
>AT3G49030.1 | Symbols: | F-box family protein |
chr3:18173138-18174769 FORWARD
Length = 443
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 25/227 (11%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D IS LP+D+L ILS +PT++VI TS LSKRW+ LW V +L F T
Sbjct: 20 EDRISELPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPNLTFDF----------TF 69
Query: 64 EVRY--SFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
+ +Y +F + + +L E + L+L + G + + MW+ A +
Sbjct: 70 DPKYHQTFSENLYRSLTSHEASVLESLQLNFTRGIDGLN-------IGMWIATAYVRHVR 122
Query: 122 KLNL----SLHEVIFILPDCLFA-SKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITF 176
KL L + + LF + +L L++ Y +L +P +C L+ L L + F
Sbjct: 123 KLVLVSFGDVRDKRARFRSALFNFNDTLDILEIQDYILLDLPSPVCLKSLRELRLYEVHF 182
Query: 177 EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYD 223
+ E S L GCP LE L ++ ++ +I +PSL+ L I YD
Sbjct: 183 KDEASVCNLLCGCPSLEVLSVHRERNVDVETFTIVVPSLQRLTI-YD 228
>AT5G02700.1 | Symbols: | F-box family protein | chr5:609381-611679
REVERSE
Length = 456
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 48/302 (15%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGC--NCTSK 60
G D I+ +PDDIL ILSF+PT +RTS LS+RW+H+W LD K G +
Sbjct: 25 GADFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDITLKHGAMNQTLTS 84
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
T + SF KLV M L+ +V +V W+ AL +
Sbjct: 85 YTAPIITSF-KLV--------------------MDLNSNTVP----QVDSWIEFALSRNV 119
Query: 121 EKLNLSLHEVIFI----LPDCLFASKSLCKLKLTMYCVLRVPG-SICFSCLKTLHLKYIT 175
+ L++ + + + PD + S SL L +T+ +P ++ + L+ L L++
Sbjct: 120 QNLSVFVRDFTYSKTYRFPDIFYLSSSLKLLDVTLDFFDMIPTCTVSWKSLRNLTLRFCQ 179
Query: 176 FEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIA-IPSLRTLIIDYDCSYPDDFLDCV 234
E S + GCP+LE L L C + + R+ ++ P+LR L I+
Sbjct: 180 IPDE-SIHNILSGCPILESLTLDTC--RLLERLDLSKSPNLRRLDINQQYRRTGPVAIVA 236
Query: 235 VEI------------SAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGALHNLKLL 282
I + V+++SL+ N I L L++ Y + +++ HN+K L
Sbjct: 237 PHIYYLRLTYSSTPSTIVDVSSLSEANLTIISSLLSPLTADGYQTMALEMLSKFHNVKRL 296
Query: 283 YV 284
V
Sbjct: 297 TV 298
>AT5G56380.1 | Symbols: | F-box family protein |
chr5:22838836-22840353 REVERSE
Length = 439
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 165/419 (39%), Gaps = 64/419 (15%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS+L D+IL ILSFL TKDV++T LSKR+K W+ V L+F + T
Sbjct: 2 DRISHLADEILSKILSFLGTKDVMQTMLLSKRFKSQWLLVPKLEFDDSTHLPETWGYQEP 61
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
+F + VD +LL RE ++ L L+ + + +WV A+K + +L
Sbjct: 62 DYGNFRRFVDRSLLSREGRVLQTLFLK-------LGRQCSYDDIAIWVGIAVKRGLMELK 114
Query: 125 LSLHEVIF----ILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
L + + LP L+ ++L LKL L VP +C LKTL L+ + +
Sbjct: 115 LKYTDSYYPKRSSLPRSLYTCETLVVLKLKK-GYLDVPDLVCLRSLKTLSLRDMNYSNAS 173
Query: 181 STQQLFLGCPVLEKLILY-----NCG----------------------WKNIRRISIAIP 213
+L CPVLE+L + +C + I R ++
Sbjct: 174 CLLRLLASCPVLEELFIQQGYYDSCALSFKIILPCLKKLSYLPKRKKKYSGIDRSEVS-G 232
Query: 214 SLRTLIIDYDCSYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ-- 271
+ L++D +D S + ++N E++ L+Y+ V V+
Sbjct: 233 GISGLVLDAPSLKYLHIVDRSGLFSVSEIININAVVKATLEVNASRPEKLLYSLVSVEHI 292
Query: 272 --------------LFGALHNLKLLYVL*NCLVDFRV*NPLHFRIIPLSLQKSPNLESLN 317
L + H LK L V C ++ + L+ SP+L+ +
Sbjct: 293 RLCLSATEVVYPVGLGSSFHKLKRLEVC-TCKSEW-------LDLFIHLLEDSPSLQDIK 344
Query: 318 FFEFDPNICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERT 376
+ P + +VP C L+T + G E L YL + A ++
Sbjct: 345 INQCHPVTNPRPQWNQPGSVPRCLSSSLETLEWVEYGGTHEEKELSTYLFKTAVCFKKA 403
>AT5G22720.1 | Symbols: | F-box family protein |
chr5:7549565-7551174 REVERSE
Length = 422
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 170/407 (41%), Gaps = 80/407 (19%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDL-----DFKNKLGCNCT 58
+D+IS LPD ++ IL +L TK + TS LSKRW+ LW++ L DF +
Sbjct: 22 EDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWLSTPGLVLISNDFTD------- 74
Query: 59 SKQTVEVRYSFLKLVDSALLF--REPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAAL 116
+F+ VD L F + C+ KL+L R + VT W+
Sbjct: 75 -------YNAFVSFVDKFLGFSREQKLCLHKLKLSIRKGENDQDC------VTRWIDFVA 121
Query: 117 KNKIEKLNLSLH----EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLK 172
K++ L++ + E ++P L++ +SL L+L C+ + S+ CLKT+ L+
Sbjct: 122 TPKLKHLDVEIGPTRCECFEVIPLSLYSCESLLYLRLNHVCLGKFE-SVSLPCLKTMSLE 180
Query: 173 YITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPD-DFL 231
+ E + L CPVLE L + + + + + +L +L I+ Y D D
Sbjct: 181 QNIYANEADLESLISTCPVLEDLSFVSGAYDKVNVLRVQSQTLTSLNIEGCVEYLDLDKS 240
Query: 232 DCVVEISAVNLTSLNCTNYLIFEL----SLCNLSSLVYAY---------VDVQLFGALHN 278
+ +++ + + +L Y + SL ++ L Y + VD+Q +HN
Sbjct: 241 EVLIDATRLKYLNLEADQYESKTIRNSGSLTKVNLLGYFHMKNNDDDDEVDLQKRDMVHN 300
Query: 279 -------LKLLYVL*NCLVDFRV*NP---LHFRIIPLSLQKSPNLESLNFFEFDPNICFI 328
+ + + R P L +P L L SL F E
Sbjct: 301 FFTSISGVSDMKISSQAFAGLRYWTPKKELRLSFVPRCL-----LSSLEFVEI------- 348
Query: 329 GEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLER 375
+G SN+ R+K + G E L RY +EN+T+L++
Sbjct: 349 -KGCSRSNM-----ERVK------YVGEPIETKLARYFVENSTILKK 383
>AT1G66310.1 | Symbols: | F-box family protein |
chr1:24722971-24724475 REVERSE
Length = 442
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 190/436 (43%), Gaps = 82/436 (18%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D + +LP+ +L IL LPTKDV++TS LS +W++LW V LD + + T T
Sbjct: 19 DWLRDLPESLLCHILLNLPTKDVVKTSVLSSKWRNLWRLVPGLDLDSS---DFTENNT-- 73
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
F+ +D + F ++K +L L+G V S + W+ +K K+ L+
Sbjct: 74 ----FVSFIDRFMSFHSDLYLKKFKLRFFCNLNGDEV-SENAHIARWINDVVKRKVHNLD 128
Query: 125 LSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPG--SICFSCLKTLHLKYITFEGEWST 182
L+ V +P L+ SL LKL C + +P C+K + L+++ F + +
Sbjct: 129 LTWGAV--EIPPILYLCNSLVSLKL---CGVTLPNLELTSLPCVKVIVLEWVKFANDLAL 183
Query: 183 QQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYD-CSYPDDFLDCVVEISAVN 241
+ L GC VLE L L N++ + ++ SL L Y+ SY D V+EI+A
Sbjct: 184 EMLISGCLVLESLTLCRRPNDNVKILRVSSQSL--LRFSYNGSSYKGLHDDLVLEINAPK 241
Query: 242 LTSLNCTNYLIFELSLCNL-SSLVYAYVDVQL------------------FGALHNLKLL 282
L L ++ + + N SS+V A +++ L + ++K L
Sbjct: 242 LKILKLFSHQLTTSFIRNTSSSIVEADINIGLGKKFDPKDLPKRNVICNFLAGISSVKNL 301
Query: 283 YVL---*NCLVDFRV*NPL----------------HFRIIPLSLQKSPNLESLNFFEFDP 323
++ + D+ PL + I+P+ L+ PNL+SL
Sbjct: 302 FIAPCTLEVIYDYSRCEPLPLFCNLSYLSVDFYNNSWEILPIFLESCPNLKSLVV----- 356
Query: 324 NICFIGEGGISS--------NVPHCFKHRLKTFFI-SNFSGNAAEIHLMRYLLENATVLE 374
G I+S + P L+ I S +G E+ L+ YLLEN+ +L+
Sbjct: 357 -------GSITSPKRRTSVLSGPRRLLSSLEYVEIESPLTGEVFEMKLVSYLLENSPILK 409
Query: 375 RTRIVCVQMYQKTRRK 390
+ + + + +R+K
Sbjct: 410 K---LTINLDDSSRKK 422
>AT5G22610.1 | Symbols: | F-box family protein |
chr5:7515217-7516916 FORWARD
Length = 472
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 172/413 (41%), Gaps = 70/413 (16%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D+IS LP+ +L ILS+LPTKD++RTS LSKRWK +W+ + LD + +
Sbjct: 17 EDLISKLPEVLLSQILSYLPTKDIVRTSVLSKRWKSVWLLIPGLDLDSSEFPHYD----- 71
Query: 64 EVRYSFLKLVDSALLF--REPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
+F+ ++ L F E C+ KL+L + + S VT+W + K++
Sbjct: 72 ----TFVDFMNEFLFFSREENPCLHKLKLSIQKNENDPSC------VTLWTDCVARGKLQ 121
Query: 122 KLNLSL------HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSI-CFSCLKTLHLKYI 174
L++ E ++P L+ K+L L+L + S+ LK++ L+
Sbjct: 122 HLDVEFGGRVMEREFWEMMPLSLYICKTLLHLRLYRVLLGNFDQSVDSLPSLKSMCLEEN 181
Query: 175 TFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRR-----ISIAIPSLRTLIIDYDCSYPDD 229
+ E S + L C VLE L + N+R + I P L+ L + D S
Sbjct: 182 VYSNEASLESLISSCRVLEDLTIVKID-DNVRDRGNSGLVIDAPRLKYLTFNNDQSKSKT 240
Query: 230 F--LDCVVEISAVN-------------------LTSLNCTNYLIFELSLCNLSSLVYAYV 268
L +V+++ + LT ++ YLI + + S
Sbjct: 241 ISNLGSLVKVTILGPIKISRVVGCTEQQMAHKFLTGISRVRYLIVSEDMMEVISSYLKED 300
Query: 269 DVQLFGALHNLKLLYVL*NCLVDFRV*NPLHFRIIPLSLQKSPNLESLNFFEFDPNICFI 328
+ FG L LK L DF I+P L+ PNL+S+ C +
Sbjct: 301 SLPQFGNLSYLKASVWL--SSFDF-------LDILPKLLESCPNLKSIVL----ETTCIV 347
Query: 329 GEGGIS-----SNVPHCFKHRLKTFFISN-FSGNAAEIHLMRYLLENATVLER 375
+ S+VP C L+ I N S + + + RY +EN+ L++
Sbjct: 348 DRTKATVERRVSSVPECLLSSLEFVEIKNRISVDDGALEVARYFVENSVNLQK 400
>AT3G58940.1 | Symbols: | F-box family protein |
chr3:21781002-21783213 REVERSE
Length = 618
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 26/300 (8%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D +SNLP+++ ILSFLPTK TS LSK W +LW ++LD + L +
Sbjct: 2 DRVSNLPEEVRCHILSFLPTKHAALTSVLSKSWLNLWKFETNLDIDDSDFLHPEEGKAER 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
E+R SF++ VD L + I K L+ ++G V W+C L+ +
Sbjct: 62 DEIRQSFVEFVDGVLALQGDSPIEKFSLK---CITGIHPD----HVNRWICNVLQRGVSD 114
Query: 123 LNL--------SLHEVIFILPDCLFASKSLCKLKL-TMYCVLRVPGSICFSC--LKTLHL 171
L L + + + LP +F S++L KLKL + +CV I S LK+L++
Sbjct: 115 LYLFTDFSDEDTEEDGGYRLPQEMFVSRTLVKLKLRSEHCVNWWHWDIGASLPNLKSLNI 174
Query: 172 KY-ITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDF 230
+ F GE ++ PVLE++ + N W+ + +++ SL L I + +
Sbjct: 175 DSDLIFFGE--MEKFLSSFPVLEEVHMANMEWRELDE-TMSSASLTKLSI-HGTGVEEFE 230
Query: 231 LDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVD-VQLFGALHNLKLLYVL*NCL 289
+ I NL LN ++ + + L + +V + + V+L + N++ LY+ + L
Sbjct: 231 HPKSISIDTPNLLYLNYSDLVAEDYPLDDEGDVVLQFCNVVKLINGIQNIQTLYLTEDTL 290
>AT4G10420.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 11 plant
structures; EXPRESSED DURING: 6 growth stages; CONTAINS
InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like
(InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT4G10400.2); Has
664 Blast hits to 644 proteins in 11 species: Archae -
0; Bacteria - 8; Metazoa - 17; Fungi - 0; Plants - 639;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr4:6453085-6454209 REVERSE
Length = 322
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 132/295 (44%), Gaps = 30/295 (10%)
Query: 110 MWVCAALKNKIEKLNLS---LHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCL 166
MWV L + +L + + ILP L+ KSL LKL ++ VP +C L
Sbjct: 1 MWVVVVLSRYVRELEIYSSCYQDKQNILPSSLYTCKSLVILKLNGGILMDVPRMVCLPSL 60
Query: 167 KTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLR--TLIIDYDC 224
KTL LK + + + S Q+L CPVLE L++ C N+ + + +PSL+ +L I Y
Sbjct: 61 KTLVLKGVNYFKQESLQRLLSNCPVLEDLVVNLCHHDNMGKFIVIVPSLQRLSLYIGYK- 119
Query: 225 SYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ------LFGALHN 278
D+F V++ ++ L NY + N+ L AYVDV+ L G++ +
Sbjct: 120 RVLDEF---VIDTPSLEYFKLVDRNYDSHPCLIENMPKLTEAYVDVRSTDLQSLIGSITS 176
Query: 279 LKLLYVL*NCLV-DFRV*NPLH-----------FRIIPLSLQKSPNLESLNFF-EFDPNI 325
+K L + + D + N L ++ L+ SPNL+ L +F E D +
Sbjct: 177 VKRLIISSKAMFGDGYIFNRLERLTLHVLEENPSNLLSQFLKDSPNLQELEYFSELDDSY 236
Query: 326 --CFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
+ S VP C L+ F S + G + + Y+L+NA L I
Sbjct: 237 ENMRMFPWNQPSIVPECLLSSLQKFTWSQYLGRTQDRDIAVYILKNACCLRNATI 291
>AT3G59240.1 | Symbols: | F-box family protein |
chr3:21898682-21900364 REVERSE
Length = 504
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 19/275 (6%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
KDIIS+LP+ ++ +LSF+PTK+ TS LS++W++L+ LDF + +
Sbjct: 7 KDIISDLPEALICHLLSFVPTKEAALTSLLSEKWRYLFAFAPILDFDDSVWMQSPLVYMN 66
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
EV F+ VD L + + + L R + + +FR W+ ++ + L
Sbjct: 67 EVHRKFMDFVDRVLGLQGNSTLVRFSLNCRNGID----RECIFR---WISNVIERGVSDL 119
Query: 124 NLSLHEVI-FILPDCLFASKSLCKLKL-TMYCVLRVPGSICFSCLKTLHLKYITF-EGEW 180
+L + V +P +F SKSL KL++ T C + + LKTL L I F +G+
Sbjct: 120 DLGGNFVSNRSMPSSVFVSKSLVKLRIRTENCTIIDLEDVFLPKLKTLDLSSIWFRDGDT 179
Query: 181 STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLII---DYDCSYPDDFLDCVVEI 237
+L GC VLE L + + W S++ +L+ L + D+D S +
Sbjct: 180 CLLKLISGCQVLEDLTMSDLWWDGYWNRSMSSKTLKRLTVHCSDWDRSPGS------ISF 233
Query: 238 SAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL 272
NL + + + + N SLV A + +++
Sbjct: 234 DTPNLVYFEYFDLVADKYEVVNFDSLVEASIGLRM 268
>AT3G03040.1 | Symbols: | F-box family protein | chr3:684685-686277
FORWARD
Length = 472
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 24/271 (8%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D++S+LPD++ ILSFL TK+ TS LSK+W++L+ V +LDF + L ++
Sbjct: 2 DLLSSLPDEVRCLILSFLTTKESASTSVLSKKWRNLFALVPNLDFDDSEFLHPEEGKRER 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRK--LRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
+ SF+ VD L + IRK L+ E +P + RV W+C L+ +
Sbjct: 62 DGILQSFMDFVDRVLSLQGNSSIRKFSLKCETGVPPA---------RVNRWLCEVLQRDV 112
Query: 121 EKLNLSLH-EVIFILPDCLFASKSLCKLKL-TMYCVLRVPGS--ICFSCLKTLHLKYITF 176
++L++ + LP+ LF S++L LKL + + + PG+ LK+L + +
Sbjct: 113 SDIDLTIDLGYGYYLPEELFVSETLVNLKLKSAFNIDWWPGAEGTSLPMLKSLCVYGVRV 172
Query: 177 EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTL-IIDYDCSYPDDFLDCVV 235
+ Q+L PVLE+L + N W + +++ +L TL I P +
Sbjct: 173 FCDDELQELLPCFPVLEELQMSNMQWLDSDE-TVSSATLTTLHITGIRSENPKS-----I 226
Query: 236 EISAVNLTSLNCTNYLIFELSLCNLSSLVYA 266
NL S T+++ + L N+ +L A
Sbjct: 227 SFDTPNLLSFVYTDFVAEDYPLVNMKNLSLA 257
>AT2G29930.3 | Symbols: | F-box family protein |
chr2:12756457-12758087 REVERSE
Length = 459
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 177/435 (40%), Gaps = 82/435 (18%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
+D IS+LPD+ILG ILS T TS LSKRW++L V +LD + G +
Sbjct: 10 SRDYISSLPDEILGKILSLFCTNRAACTSVLSKRWRNLLELVDNLDLNDAYGNH------ 63
Query: 63 VEVRYSFLKLVDSAL-LFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
+Y F VD L L +++ L V SW+ T++ L +E
Sbjct: 64 ---QY-FCDFVDRTLALLSNSTTVKRFSLNCAFHNDASRVNSWI--RTVFDRGFLDLHLE 117
Query: 122 KLNLSLHEVIFILPDCLFASKSLCKLKL--TMYCVLRV-PGSICFSCLKTLHLKYITFEG 178
++ + F F S +L +L + Y R+ PG + F LK+L L + F
Sbjct: 118 TAHMHRIDTEF------FTSNTLLELTICGGFYAEGRLPPGRVFFPALKSLSLVSVEFTD 171
Query: 179 EWSTQQLFLGCPVLEKLILY-----NC-GWKNIRRISIAIPSLRTLII----------DY 222
Q GCPVLE+L L+ C WK + ++ PS++ L I Y
Sbjct: 172 TLMYQNFISGCPVLEELFLHYDNETQCPAWKGL----VSSPSIKRLNIYDNPSELRYEAY 227
Query: 223 DCSY--PD----DFLDCVVEISAVNLTSLNCTNYLI-FELSLCNLSSLVYAYVDVQLFGA 275
C + P D+ V + AV+L SL I + L + + ++ V L
Sbjct: 228 KCCFQIPSLVYLDYSSYVAKQYAVDLVSLEEARLNIRYPERLVDQNEDIFGDV-TDLLKG 286
Query: 276 LHNLKLLYVL*NCL------------------VDFRV*NPLHFRIIPLSLQKSPNLESL- 316
+ N+K L++ + L + F + ++++PL L KSPNLE+L
Sbjct: 287 ISNVKTLHLSSDSLEVFHLCCDTMPVFHNLLTLSFESDEEIGWQVVPLLLNKSPNLETLV 346
Query: 317 --NFFEFDPNICFIGEGGISSNVPH----------CFKH-RLKTFFISNFSGNAAEIHLM 363
+ ++C IS C ++K IS + G E+ M
Sbjct: 347 IKSLVHQVTDMCGNACACISKRRKKKKKTTEDDECCLSTCQVKVLNISGYRGTCKELKQM 406
Query: 364 RYLLENATVLERTRI 378
R+ LEN LE +
Sbjct: 407 RHFLENLKCLETVNV 421
>AT2G29930.1 | Symbols: | F-box family protein |
chr2:12756457-12758087 REVERSE
Length = 459
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 177/435 (40%), Gaps = 82/435 (18%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
+D IS+LPD+ILG ILS T TS LSKRW++L V +LD + G +
Sbjct: 10 SRDYISSLPDEILGKILSLFCTNRAACTSVLSKRWRNLLELVDNLDLNDAYGNH------ 63
Query: 63 VEVRYSFLKLVDSAL-LFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
+Y F VD L L +++ L V SW+ T++ L +E
Sbjct: 64 ---QY-FCDFVDRTLALLSNSTTVKRFSLNCAFHNDASRVNSWI--RTVFDRGFLDLHLE 117
Query: 122 KLNLSLHEVIFILPDCLFASKSLCKLKL--TMYCVLRV-PGSICFSCLKTLHLKYITFEG 178
++ + F F S +L +L + Y R+ PG + F LK+L L + F
Sbjct: 118 TAHMHRIDTEF------FTSNTLLELTICGGFYAEGRLPPGRVFFPALKSLSLVSVEFTD 171
Query: 179 EWSTQQLFLGCPVLEKLILY-----NC-GWKNIRRISIAIPSLRTLII----------DY 222
Q GCPVLE+L L+ C WK + ++ PS++ L I Y
Sbjct: 172 TLMYQNFISGCPVLEELFLHYDNETQCPAWKGL----VSSPSIKRLNIYDNPSELRYEAY 227
Query: 223 DCSY--PD----DFLDCVVEISAVNLTSLNCTNYLI-FELSLCNLSSLVYAYVDVQLFGA 275
C + P D+ V + AV+L SL I + L + + ++ V L
Sbjct: 228 KCCFQIPSLVYLDYSSYVAKQYAVDLVSLEEARLNIRYPERLVDQNEDIFGDV-TDLLKG 286
Query: 276 LHNLKLLYVL*NCL------------------VDFRV*NPLHFRIIPLSLQKSPNLESL- 316
+ N+K L++ + L + F + ++++PL L KSPNLE+L
Sbjct: 287 ISNVKTLHLSSDSLEVFHLCCDTMPVFHNLLTLSFESDEEIGWQVVPLLLNKSPNLETLV 346
Query: 317 --NFFEFDPNICFIGEGGISSNVPH----------CFKH-RLKTFFISNFSGNAAEIHLM 363
+ ++C IS C ++K IS + G E+ M
Sbjct: 347 IKSLVHQVTDMCGNACACISKRRKKKKKTTEDDECCLSTCQVKVLNISGYRGTCKELKQM 406
Query: 364 RYLLENATVLERTRI 378
R+ LEN LE +
Sbjct: 407 RHFLENLKCLETVNV 421
>AT4G22280.1 | Symbols: | F-box family protein |
chr4:11776054-11777517 REVERSE
Length = 415
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 175/421 (41%), Gaps = 65/421 (15%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D I+ L DDI+ ILS L K+ TS LS RW++L+ +L C Q V
Sbjct: 2 DRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNL---------CLDDQEVG 52
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
SF+ VD L+ + IR++ ++ RM + V WM V L++ + L+
Sbjct: 53 GGDSFIDFVDRVLVVTGNFPIRRISIKCRMSIDTGHVTRWMVDV-------LEHGVSYLD 105
Query: 125 LSLHEVIF--ILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGE--W 180
+ + +P +F K+L +LKL VP + LKTL L I F
Sbjct: 106 IDIISEDDIGFVPLEIFTCKTLVELKLARGFYAMVPDYVSLPSLKTLFLSSIWFCNRDCC 165
Query: 181 STQQLFLGCPVLEKLILYNCGWKNIRRI-SIAIPSLRTLIIDYDCSYPDDFLDCVVEISA 239
+L CPVLE+L + W++I +++ +L+ L I Y ++ + I
Sbjct: 166 PLGRLLSACPVLEELTIIGGCWQHIEFCRTVSSSTLKKLTITSSFHY--EYWG--ITIDT 221
Query: 240 VNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ---------LFGALHNLKLLYV----L* 286
+L L ++ + NL SLV A + + L L N+++L +
Sbjct: 222 PSLAYLEYSDLVPRHFPFVNLESLVEAKLALDLCSDSNPTNLIKGLRNVEVLELSSGYTS 281
Query: 287 NCLVDFRV*NPL--------------HFRI---IPLSLQKSPNLESLNFFEFDPNICFIG 329
L DFR P+ H+ I +P+ L+KSP LE+L +
Sbjct: 282 QILYDFREAIPVLSKLFRLSIKSNSRHYYIWNLLPILLEKSPKLETLVIKGPLSADRYER 341
Query: 330 EGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLE--RTRIVCVQMYQKT 387
E G+S V K I+ + G E+ M + L+ LE + R + +K+
Sbjct: 342 EYGLSCPV--------KVLEITEYGGKYEELEQMEHFLKKLPCLELVKVRASAINDKEKS 393
Query: 388 R 388
R
Sbjct: 394 R 394
>AT5G52460.1 | Symbols: EDA41 | EDA41 (embryo sac development arrest
41) | chr5:21292375-21293758 REVERSE
Length = 369
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 154/389 (39%), Gaps = 87/389 (22%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
+D IS+LPDD+L IL +P KD + T LSKRW+++W + L++ + G C ++
Sbjct: 15 SRDEISSLPDDLLIQILLLVPIKDAVGTMILSKRWRYVWTLLPKLEYSDP-GDEC---ES 70
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
V+V KLV +A+ +RKL LE W T
Sbjct: 71 VDVG----KLVANAV----DRFVRKLELE----------LHWTAEPTS------------ 100
Query: 123 LNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWST 182
LP L+ K+L +L L+ ++ VP S+C L L L Y+ F+ E S
Sbjct: 101 -----------LPKSLYTCKTLVELTLSDKIIVDVPSSVCLPSLNILRLFYVVFKDENSL 149
Query: 183 QQLFLGCPVL--EKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAV 240
++L C VL K+ L ++ R + L ID C D F
Sbjct: 150 ERLISSCSVLARSKVGLAISDNRDYRFAKVHKLRLEKPHIDVVCHTDDKF---------- 199
Query: 241 NLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGAL----HNLKLLYVL*NCLVDFRV*N 296
L +++ YL+ L L + +L + G L H
Sbjct: 200 -LKAISLVTYLV--LPLEDPMALDFRGFTFTRLGKLVICPH------------------G 238
Query: 297 PLHFRIIPLSLQKSPNLESL---NFFEFDPNICFIGEGGISSNVPHCFKHRLKTFFI-SN 352
L IIPL L SP L L + + DP I G VP C L F+
Sbjct: 239 HLWLDIIPLILNNSPKLRFLAITSVMDIDPEISHC-HGTNQGTVPRCLSAHLDEEFVWHG 297
Query: 353 FSGNAAEIHLMRYLLENATVLERTRIVCV 381
+ GN E L+RY+ NA L++ + +
Sbjct: 298 YRGNEEETQLIRYIFANAKCLKKVTVTSI 326
>AT5G56390.1 | Symbols: | F-box family protein |
chr5:22842790-22844273 REVERSE
Length = 428
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 181/431 (41%), Gaps = 75/431 (17%)
Query: 5 DIISNLPDDILGCILSFLP-TKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
D IS L D++L ILS LP KDV+ T LSKRW++LW+ V L + + S Q +
Sbjct: 2 DKISQLHDELLLGILSLLPNAKDVVATMVLSKRWRYLWMMVPSLVYDD-------SYQDI 54
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
+ F + VD +L + I L F + + AA K + KL
Sbjct: 55 DYG-RFSRFVDRSLALHKAPVIDTLH---------FKLGHICGSGDTLIGAAEKCCVRKL 104
Query: 124 NLSL----------HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKY 173
+ + +VI + C L LKL ++ V + F LK L LK
Sbjct: 105 IIKIDDTSSRSSKTDQVILPMSLCSGVHIMLADLKLQNVVLVDVSTPVSFPSLKRLRLKS 164
Query: 174 ITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLII----DYDCSYPDD 229
+ + G L CPVLE L++ C N+ +++ +PSL+ L + + + P D
Sbjct: 165 VKYPGNEFVNNLISSCPVLEDLVVKQCSDDNVTILTVRVPSLKRLSLIQRAELEIDVPHD 224
Query: 230 FLDCVVEISAVNLTSLNCTNYLIFELSL-CNLSSLVYAYVDV------QLFGALHNLKLL 282
F+ I +L L +Y + ++ ++ A +DV ++ G+L + K L
Sbjct: 225 FV-----IDTPSLEHLKIVDYTYGSRVVKSTMNRIITASMDVFSPQTKEILGSLTSTKRL 279
Query: 283 YVL*NCLVDFRV*NP--------LHFRI----------IPLSLQKSPNLESL------NF 318
++ CL + P +H I + L+ SPNL++L N
Sbjct: 280 FL---CLPTSKDAYPVGNIFGSLIHLTICTCETEWLNVLIRVLRDSPNLKTLKIEQYHNL 336
Query: 319 FEFDPNICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
+ DP C+ +S VP L+TF ++ G E ++ ++L A+ L++ I
Sbjct: 337 RDEDPRPCW----NETSLVPEYLLPSLETFEWVDYEGTKTEKQVVAFILRIASCLKQATI 392
Query: 379 VCVQMYQKTRR 389
V + ++
Sbjct: 393 VSFKYIDHDKK 403
>AT1G52650.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT4G13960.1); Has
1151 Blast hits to 1117 proteins in 9 species: Archae -
0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1150;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:19610643-19612417 FORWARD
Length = 507
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 18/225 (8%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D +S+LP+ +L I SFL TK+ TS L KRW++L V +L + L ++
Sbjct: 44 DHVSSLPEGVLCNIFSFLTTKEAALTSILCKRWRNLLAFVPNLVIDDSVFLHPEEGKEER 103
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
E++ SF++ VD L + I+K L+ R + RV W+ L + +
Sbjct: 104 YEIQQSFMEFVDRVLALQGNSPIKKFSLKFRTDFAS-------HRVNAWISNVLARGVSE 156
Query: 123 LN----LSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEG 178
L+ L E + + P C F S++L LK+ + + G I LKTL L +
Sbjct: 157 LDVLVILYGAEFLPLSPKC-FKSRNLVTLKINSLGIDWLAGDIFLPMLKTLVLHSVKL-- 213
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYD 223
+ F P LE+L+L+ W++ R ++++ S++TL I ++
Sbjct: 214 -CVDKFFFRALPALEELVLFAVSWRD-RDVTVSNASIKTLTIKFN 256
>AT5G53640.1 | Symbols: | F-box family protein |
chr5:21785999-21790690 REVERSE
Length = 917
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D IS + +L IL++LPTKDV++TS LS RW+ LW+ V L+ ++ +
Sbjct: 21 EDRISQFYESLLCQILNYLPTKDVVKTSVLSTRWRSLWLLVPSLELDSRDFSDFN----- 75
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLE-PRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+F+ D CI KL+L GF +KS W+ AA K KI+
Sbjct: 76 ----TFVSFCDRYFDSNRVLCINKLKLTISENEEDGFYLKS-------WIDAAAKRKIQH 124
Query: 123 LNL----SLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSI-CFSCLKTLHLKYITFE 177
L++ H++ F L C ++L L+L + V G I F C+KT+HL+ +
Sbjct: 125 LDVQFLPQFHKIHFNLYKC----EALVSLRL--FEVSLDKGRIFSFPCMKTMHLEDNVYP 178
Query: 178 GEWSTQQLFLGCPVLEKLILYNCGW-KNIRRIS-------IAIPSLRTLIIDYDCSYPDD 229
E + ++L CPVLE L + G + + +I ++ P ++T+ ++ D YP++
Sbjct: 179 NEATFKELISCCPVLEDLTVIIYGMDRKVFQIEGRYDAKFVSFPCMKTMHLE-DNMYPNE 237
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 169/394 (42%), Gaps = 56/394 (14%)
Query: 25 KDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEVRYSFLKLVDSALLFREPYC 84
+D++ T LS RW+ LW+ + L+ + + + F+ D C
Sbjct: 511 QDLVTTRVLSTRWRSLWLWLPCLELNSLYFPDFNA---------FVSFGDKFFDSNRVSC 561
Query: 85 IRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLNLSL--HEVIFILPDCLFASK 142
I K +L G S++ T W+ AA+K KI+ L++ + I+ +P L+ +
Sbjct: 562 INKFKLYIYGYDVGVDDPSYL---TSWIDAAVKCKIQHLHVQCLPAKYIYEMPLSLYICE 618
Query: 143 SLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGW 202
+L LKL +L + CLKT+HL+Y+ F E + ++ CPVLE+L +Y CG
Sbjct: 619 TLVYLKLCR-VMLDDAEFVSLPCLKTIHLEYVWFPNEANLERFVSCCPVLEELKIYGCGN 677
Query: 203 KNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVNLTSLN---CTNYLIF------ 253
+N + + SL+ L I+ S D + V++ ++ +N Y++
Sbjct: 678 ENAITLRLLSRSLKKLSINILKSMCDFHSEVVIDAPLLSYLKINDNVSERYIVNNLESNA 737
Query: 254 --------------ELSLCNLSSLVYAYV-------DVQLFGALHNLKLLYVL*NCLVDF 292
E S+ + + +++++ D+ ++ L Y L F
Sbjct: 738 KLDISLPFGLLDFDEASVSSRTDSIHSFLRGILKVSDMTIWVDTFKLICKYSELESLPRF 797
Query: 293 RV*NPLH-------FRIIPLSLQKSPNLESLNFFEFDPNICFIGEGGI---SSNVPHCFK 342
+ LH + +P L+ PNL+SL N + E I SS VP C
Sbjct: 798 GYMSRLHVTLCIYDLKWLPTFLESCPNLKSLILVCVGDNDEMLSEEMIQFGSSLVPECLL 857
Query: 343 HRLKTFFIS-NFSGNAAEIHLMRYLLENATVLER 375
L+ I F G+ + L+RY LEN+ +L++
Sbjct: 858 SSLEFVDIRIPFRGHLEVMKLVRYFLENSAILKK 891
>AT1G80470.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), Cyclin-like F-box
(InterPro:IPR001810), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G16930.1); Has 1270 Blast hits to 1243
proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 1270; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr1:30256185-30257916 FORWARD
Length = 481
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 177/428 (41%), Gaps = 91/428 (21%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS L DD+L ILS +PT++ + TS +SKRW++LW V LD + + + + +
Sbjct: 32 DWISGLADDLLLQILSKVPTRESVFTSRMSKRWRNLWRHVPALDLDSSKFPHESDLE--D 89
Query: 65 VRYSFLKLVDSALLFR-------EPYC----------IRKLRLEPRMPLSGFSVKSWMFR 107
SFL+ + + R E +C + K L+ LS +++ R
Sbjct: 90 FFDSFLQFDGNLKIERFKWIYNVEEHCDPEFVSRIDHVVKRGLKDLTILSKVNIEDDSVR 149
Query: 108 --VTMWVCAALKNKIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSC 165
V+++ CA L +NL+L+ V+F P S C
Sbjct: 150 MPVSLYSCATL------VNLTLYSVVFDAPRAQLVS---------------------LPC 182
Query: 166 LKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCS 225
LKT+HL+ + F+GE L C L++L + + +S+ PSLR ++
Sbjct: 183 LKTMHLEAVKFDGETILGTLISSCSFLDELTIITHDHDELGDVSVRSPSLRRFKLESMRE 242
Query: 226 YPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGA------LHN- 278
D+ D VE+ L ++ T+Y + N+S +DV +F A +H+
Sbjct: 243 DYDECEDPNVEVDTPGLEYMSITDYQSESFIIHNISPCAKVNIDV-VFDAEDEDSVIHDF 301
Query: 279 LKLLYVL*NCLVDFRV*NPLH---------------------------FRIIPLSLQKSP 311
+ + + + R +H + + P L P
Sbjct: 302 ITAISTVRELTISARTLEMIHDYVESETELVPQFSNLFCLHASFSESSWEMFPTFLGCCP 361
Query: 312 NLESLNFFEFDPNICFIGEGGIS-SNVPHCFKHRLKTFFIS---NFSGNAAEIHLMRYLL 367
NL SL F EFD C + I+ S VPHCF+ L+ + S ++++ L Y +
Sbjct: 362 NLHSL-FLEFD---CLPEKEEINLSLVPHCFESSLEYVQLKVPITVSETSSKMELAIYFV 417
Query: 368 ENATVLER 375
N +VL++
Sbjct: 418 RNCSVLKK 425
>AT3G58980.1 | Symbols: | F-box family protein |
chr3:21794445-21797006 REVERSE
Length = 594
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 127/277 (45%), Gaps = 24/277 (8%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D ISNLP++I+ I+SFL K+ S LSKRW++L+ V L F + +V+
Sbjct: 2 DRISNLPNEIICHIVSFLSAKEAAFASILSKRWRNLFTIVIKLQFDD----------SVK 51
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
S VD L +R LE R + +CA LK I L
Sbjct: 52 NEGSLKDFVDGVLALPTSSRVRSCSLECRREFDPTHYDDF----NRCICALLKRGILDLK 107
Query: 125 LSL-HEVIFILPDCLFASKSLCKLKLTM----YCVLRVPGSICFSCLKTLHLKYITFEG- 178
L + + LP +F K+L KL+L + V VP L+TL L YI F+
Sbjct: 108 LDICAGRRYSLPLEVFTCKTLVKLELGSDFGGFVVDLVPEDAFLPALETLLLNYIRFKDL 167
Query: 179 -EWSTQQLFLGCPVLEKLILYNCGWKNIR-RISIAIPSLRTLIIDYDCSYPDDFLDCVVE 236
+ ++L C VL++L+++N W+ + +I+ P+L L I + Y +F +
Sbjct: 168 RRCAFEKLLSACLVLKELVIHNMEWERWKWSGNISSPTLERLTISHVDLYECEF--TRIN 225
Query: 237 ISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLF 273
+ NLT L ++ + + + NL SLV +D+ L
Sbjct: 226 LDTPNLTYLELSDAVPDDYPIVNLDSLVEVKLDLTLM 262
>AT1G19410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT5G62970.1); Has
533 Blast hits to 521 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 533;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:6714492-6716439 REVERSE
Length = 435
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 132/294 (44%), Gaps = 50/294 (17%)
Query: 12 DDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEVRYSFLK 71
DD+L ILSFLPTK + TS LSKR GC V V S L
Sbjct: 7 DDLLVKILSFLPTKVAVTTSILSKRGSFF-------------GCGTLPLHRVPVLES-LP 52
Query: 72 LVDSALLFREP-----------YCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
L S L F+ +C+R+L ++ + + F T+ C +
Sbjct: 53 LKFSTLPFQPEDIKLCVEAAVSHCVRELFID-------YYPHPYKF-ATLPFCVYTCKSL 104
Query: 121 EKLNLSLHEVIFILP--DCLFASKSL----CKLKLTMYCVLRVPGSICFSCLKTLHLKYI 174
E L LS + ++ ++P CL + K+L + + +L ++CF LK+LHLK +
Sbjct: 105 ETLALS-YAILMVVPRMACLPSLKNLLLQGVRYVDESFQLLDESHTVCFPSLKSLHLKEV 163
Query: 175 TFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCV 234
E + L CPVLE+L++ + + + I +PSL++L +D DC D V
Sbjct: 164 ISSDERYLRSLLANCPVLEELVMELDEYDTLGAVHIIVPSLKSLSLDIDC----DRSSNV 219
Query: 235 VEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLF------GALHNLKLL 282
VEI A +L + ++ + + N+ L AY+D +F GA ++K L
Sbjct: 220 VEIVAPSLEYIKLNDHSDNKFLIENMPKLEEAYIDANIFEYEKFLGAFTSVKRL 273
>AT1G21990.1 | Symbols: | F-box family protein |
chr1:7740530-7742106 REVERSE
Length = 465
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 109/238 (45%), Gaps = 34/238 (14%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF-KNKLGCNCTSKQ 61
+D+IS PD+ILG ILSFLPT TS LSKRW++L V L+ ++ C+
Sbjct: 7 ARDLISGSPDEILGKILSFLPTHHAATTSVLSKRWRNLLPLVDKLELTEDHPSGRCS--- 63
Query: 62 TVEVRYSFLKLVDS--ALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNK 119
F V+ ALL R I+K+ L L G S R W+ L+
Sbjct: 64 -----LGFPDFVEKTLALLDRPCSVIKKVHLNCDH-LHGES------RFYSWIRTVLERG 111
Query: 120 IEKLNLSLHEVIFILPDCLFASKSLCKLKLT--MYCVLRV-PGSICFSCLKTLHLKYITF 176
+ +L + + + F S +L +L ++ +Y + PG + F LK L + + F
Sbjct: 112 VLDFHLESSRMYRVETE-FFTSNTLVELTISGALYPEGELPPGGLFFPALKRLSIVLVAF 170
Query: 177 EGEWSTQQLFLGCPVLEKLILYNC------GWKNIRRISIAIPSLRTLIIDYDCSYPD 228
LGCPVLE+LILY GW ++ PS++ L I +D YPD
Sbjct: 171 ADCDMYDDFVLGCPVLEELILYYADDDQPPGWNG----KVSSPSIKRLTISHD--YPD 222
>AT5G35995.2 | Symbols: | F-box family protein |
chr5:14136707-14138230 REVERSE
Length = 455
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 185/444 (41%), Gaps = 89/444 (20%)
Query: 3 GKDIISNLPDDILGC-ILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQ 61
+D IS+LPD++LG ILS LPTK V+ TS LSKRW++L+ V D + + T +
Sbjct: 3 SRDFISSLPDEVLGKKILSLLPTKLVVSTSVLSKRWRNLFHFVDSFDLE-----DSTPIR 57
Query: 62 TVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
+ F+K ALL P I++L L S V W+ +ALK
Sbjct: 58 NADSFSDFMKDT-VALLSNCP--IKRLTLNSHYEKSS---------VNRWIRSALKRGCL 105
Query: 122 KLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVL---RVP--GSICFSCLKTLHLKYITF 176
+LNL ++ F + +L KL L+ Y VP G + F LKTL L +
Sbjct: 106 ELNLQSQYDHYLDIGIFFRNNTLVKLTLSSYRTFLRGNVPPEGRVFFPALKTLSLGAVVA 165
Query: 177 EG---EWSTQQLFLGCPVLEKLILYNCGWKNIRRI---SIAIPSLRTLIIDYDCSYPDDF 230
+ W L GCPVLE+L + + G + + S+ S++ L I + +
Sbjct: 166 KPALYNW----LISGCPVLEELFILDVGSGDDQPTWTRSVVSASIKRLTIVFHFPHNTYP 221
Query: 231 LDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL--------FG-------A 275
+ VEI NL L+ + + L SL A +D++L FG A
Sbjct: 222 YEDDVEIKTPNLEFLDYSALRSDGSDVDYLDSLAEARLDLRLWELTNTFDFGEVTNLVSA 281
Query: 276 LHNLKLLYVL*NCLVDFR---V*NPLHFRIIPLSLQ---------------KSPNLESLN 317
+ N+K L++ + L F P+ ++I LS++ KSPNL++L
Sbjct: 282 IRNVKTLHLSSSSLEAFYYRCYTMPVFDKLIHLSIESDKENGWQALPRLLLKSPNLQTLA 341
Query: 318 FFEFDPNICF-IGEGGISSNVP---HCFKH-------------------RLKTFFISNFS 354
+ + G ++ P + +K R+K IS +
Sbjct: 342 IKGLLHKVTYRCGNACACTSKPKKRYLYKRYEDDSPTSEVEGRCCLSTCRVKVLEISGYG 401
Query: 355 GNAAEIHLMRYLLENATVLERTRI 378
G+ E+ M + L LE +I
Sbjct: 402 GSLREVKQMEHFLRKLKYLETVKI 425
>AT5G35995.1 | Symbols: | F-box family protein |
chr5:14136707-14138230 REVERSE
Length = 455
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 185/444 (41%), Gaps = 89/444 (20%)
Query: 3 GKDIISNLPDDILGC-ILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQ 61
+D IS+LPD++LG ILS LPTK V+ TS LSKRW++L+ V D + + T +
Sbjct: 3 SRDFISSLPDEVLGKKILSLLPTKLVVSTSVLSKRWRNLFHFVDSFDLE-----DSTPIR 57
Query: 62 TVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
+ F+K ALL P I++L L S V W+ +ALK
Sbjct: 58 NADSFSDFMKDT-VALLSNCP--IKRLTLNSHYEKSS---------VNRWIRSALKRGCL 105
Query: 122 KLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVL---RVP--GSICFSCLKTLHLKYITF 176
+LNL ++ F + +L KL L+ Y VP G + F LKTL L +
Sbjct: 106 ELNLQSQYDHYLDIGIFFRNNTLVKLTLSSYRTFLRGNVPPEGRVFFPALKTLSLGAVVA 165
Query: 177 EG---EWSTQQLFLGCPVLEKLILYNCGWKNIRRI---SIAIPSLRTLIIDYDCSYPDDF 230
+ W L GCPVLE+L + + G + + S+ S++ L I + +
Sbjct: 166 KPALYNW----LISGCPVLEELFILDVGSGDDQPTWTRSVVSASIKRLTIVFHFPHNTYP 221
Query: 231 LDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL--------FG-------A 275
+ VEI NL L+ + + L SL A +D++L FG A
Sbjct: 222 YEDDVEIKTPNLEFLDYSALRSDGSDVDYLDSLAEARLDLRLWELTNTFDFGEVTNLVSA 281
Query: 276 LHNLKLLYVL*NCLVDFR---V*NPLHFRIIPLSLQ---------------KSPNLESLN 317
+ N+K L++ + L F P+ ++I LS++ KSPNL++L
Sbjct: 282 IRNVKTLHLSSSSLEAFYYRCYTMPVFDKLIHLSIESDKENGWQALPRLLLKSPNLQTLA 341
Query: 318 FFEFDPNICF-IGEGGISSNVP---HCFKH-------------------RLKTFFISNFS 354
+ + G ++ P + +K R+K IS +
Sbjct: 342 IKGLLHKVTYRCGNACACTSKPKKRYLYKRYEDDSPTSEVEGRCCLSTCRVKVLEISGYG 401
Query: 355 GNAAEIHLMRYLLENATVLERTRI 378
G+ E+ M + L LE +I
Sbjct: 402 GSLREVKQMEHFLRKLKYLETVKI 425
>AT3G58960.1 | Symbols: | F-box family protein |
chr3:21787146-21788807 REVERSE
Length = 475
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 132/278 (47%), Gaps = 26/278 (9%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS+L +DI+ I+SFL KD S LSKRW++++ V +L+F N T+E
Sbjct: 2 DRISSLSNDIISNIVSFLSAKDAAVASVLSKRWQNIYTIVPNLEFDN----------TLE 51
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
+ S ++ L I+ + ++ R G + + ++C LK + KL
Sbjct: 52 NQGSLTDFLNGLLALPASTRIKNVSIKRR----GRDGPNRDADLNRFLCNVLKRGVLKLK 107
Query: 125 LSLHEVI---FILPDCLFASKSLCKLKL-TMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
L + + + LP +F K+L +L+L ++ + VP + LKTL + + F +
Sbjct: 108 LDIWVTLDGRYSLPVEVFTCKTLVELELGSILQIDLVPENALLPALKTLIIDAVQFSDQS 167
Query: 181 --STQQLFLGCPVLEKLILYNCGWKN---IRRISIAIPSLRTLIIDYDCSYPDDFLDCV- 234
+ Q+L CPVL +L + N W++ RR+S P+L L +++ + + + D
Sbjct: 168 GCAFQKLLSSCPVLVELRMLNVQWEHWQWSRRVS--SPTLEKLTMNHRYHFGNTYYDMEG 225
Query: 235 VEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL 272
+ +LTSL + NL SLV A + + L
Sbjct: 226 ITFDTPSLTSLKYYDLPPKSYPTVNLDSLVEATISLTL 263
>AT1G48400.1 | Symbols: | F-box family protein |
chr1:17882136-17883855 REVERSE
Length = 513
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 15/276 (5%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D ISNLPD+ILG ILS LPTK TS LSKRW++L V +L F + ++
Sbjct: 9 RDSISNLPDEILGKILSLLPTKVAASTSVLSKRWRNLLGLVDNLCFDESMVVYPNEEEET 68
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
F VD I+K L R+ V + R W+ ++ + ++
Sbjct: 69 SGSLRFCDFVDKTFALLSNSHIKKFSLS-RVYKYNDDVDGMVRR---WIRTVMERGLLEI 124
Query: 124 NLSLHEVIFILPDC-LFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWST 182
+L + F+ + L S +L KL L+ C + V + F LK+L L + G+++
Sbjct: 125 HLHATPMSFVAIETKLLTSNTLVKLTLSARCFVEVE-RVFFPALKSLSL--FSILGDYTN 181
Query: 183 Q-QLFLGCPVLEKLILYNCGWKNIR---RISIAIPSLRTLIIDYDCSYPDDFL-DCVVEI 237
+L GCPVLE+L + + + +R ++ SL+ L+I P++ + ++
Sbjct: 182 YIRLIDGCPVLEELYMRDGDYPFLRLTCGTNVESASLKRLVI--FTHNPNEMIWHELIYF 239
Query: 238 SAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLF 273
A +L L+ ++Y+ + + + LV A + ++L+
Sbjct: 240 EAPSLVYLDYSSYVSAKYDVVDFDLLVEARLSLRLW 275
>AT5G56820.1 | Symbols: | F-box family protein |
chr5:22976334-22977838 FORWARD
Length = 435
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 171/398 (42%), Gaps = 48/398 (12%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS LPDD+L ILSF+ T D I TS LSKRWK +W + LD N + + E
Sbjct: 15 DRISYLPDDLLLRILSFIHTSDAISTSLLSKRWKFVWKMMPTLDLDEDSCRNIGTLRFDE 74
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
FLK ++ +L L L+ P + + +K + ++
Sbjct: 75 GCCMFLKSHEAPVL-------TSLNLKLMTPSHDID----------RLLSNIKPILHEIT 117
Query: 125 LSLHEVIFI-LPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQ 183
++ + I P L ++L +KL ++ V +CF LK+LHL + + S
Sbjct: 118 ITSYRYSTIRFPRNLNVCQTLVVMKLQDKVLVDVSFPVCFRSLKSLHLTRVKYSCRESFT 177
Query: 184 QLFLGCPVLEKLILY--NCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVN 241
L CPVLE L L+ + + +I +PSL+ L I C F EIS +
Sbjct: 178 TLLSACPVLEDLDLFIGRVHYDCLNSFTIWVPSLQRLSI---CDESYRFRSTTFEISVPS 234
Query: 242 LTSLN--CTNYLIFELSLCNLSSLVYAYVDVQLFGALHNLKLLYV---L*NCLVDFRV*N 296
L L C + F+ + ++ +LV A+V+ + L+ L L + + R+ +
Sbjct: 235 LKYLKIACQDS-CFKF-VEDMPNLVEAHVEANQHETKNLLRFLTSVERLKDPDLTDRIFH 292
Query: 297 PLHF------------RIIPLSLQKSPNLESLNFFEFDPNICFIGEGGIS----SNVPHC 340
L + RI+ L L+ SPNL++L E P + IS ++VP C
Sbjct: 293 QLLYLELHLHKRLNGDRILSL-LKHSPNLQTLKLNE-KPLRSIKDQPNISVRKPNSVPEC 350
Query: 341 FKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
L+T ++G + + Y+L NA L I
Sbjct: 351 LTFHLETLEWQGYAGRPEDKEIAVYILGNALRLNTATI 388
>AT1G69630.1 | Symbols: | F-box family protein |
chr1:26191640-26193174 REVERSE
Length = 451
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 117/271 (43%), Gaps = 21/271 (7%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS LPD +L +L LPTKDV++TS LS+RW++LW V LD N T Q
Sbjct: 18 DWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLDN------TDFQEFN 71
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
+FL VDS L F ++K L+ +F + W+ + K++ ++
Sbjct: 72 ---TFLSFVDSFLDFNSESFLQKFILKYD---CDDEYDPDIFLIGRWINTIVTRKVQHID 125
Query: 125 L---SLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWS 181
+ S LP ++ +SL LKL L P + LK + L F +
Sbjct: 126 VLDDSYGSWEVQLPSSIYTCESLVSLKLC-GLTLASPEFVSLPSLKVMDLIITKFADDMG 184
Query: 182 TQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLR--TLIIDYDCSYPDDFLDCVVEISA 239
+ L CPVLE L + I + + SL T + D D +D VV I A
Sbjct: 185 LETLITKCPVLESLTIERSFCDEIEVLRVRSQSLLRFTHVADSDEGVVEDL---VVSIDA 241
Query: 240 VNLTSLNCTNYLIFELSLCNLSSLVYAYVDV 270
L L +++ + L LV A +D+
Sbjct: 242 PKLEYLRLSDHRVASFILNKPGKLVKADIDI 272
>AT2G29910.2 | Symbols: | F-box family protein |
chr2:12751823-12752830 REVERSE
Length = 335
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 126/284 (44%), Gaps = 28/284 (9%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D+IS+LPD+ILG +LS LPTK T+ LSKRW +L V LD + +G
Sbjct: 4 RDLISSLPDEILGKVLSLLPTKRAASTAVLSKRWNNLPALVDKLDINDAIGGPG------ 57
Query: 64 EVRYSFLKLVDSAL-LFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
F + +D L L I++ L V +W+ C L +
Sbjct: 58 ----GFPEFIDKTLALLTNSTTIKRTSLNNEFQYGESQVNTWIRSFLERGCLQLYLNAQS 113
Query: 123 LNLSLHEVIFILPDCLFASKSLCKLKLTMYCV---LRVPGSICFSCLKTLHLKYITFEGE 179
L + + F S +L +L +T L PG + F LKTL L +TF
Sbjct: 114 L--------YTIDTEFFTSNTLVELTITGGFSPDGLLPPGGVFFPKLKTLSLVLMTFVDS 165
Query: 180 WSTQQLFLGCPVLEKLILYNCGWK--NIRRISIAIPSLRTL-IIDYDCSYPDDFLDCVVE 236
+ GCP+LE+ +L N + + ++ PS++ L I+ + +Y + C
Sbjct: 166 DMYELFISGCPLLEEFLLRNDEIEIPPVWNALVSSPSIKRLTIVHHFPNYREAHDGCWFR 225
Query: 237 ISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGALHNLK 280
NL L+ ++Y + + +L SLV A +D++ + L + K
Sbjct: 226 TP--NLVYLDYSSY-VPDWYEVDLGSLVEARLDLRSWERLRDEK 266
>AT1G13780.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT5G27750.1); Has 1281 Blast hits to 1250
proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 1279; Viruses - 0;
Other Eukaryotes - 2 (source: NCBI BLink). |
chr1:4724681-4726314 FORWARD
Length = 456
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
G D IS LP+ ++ IL LPTK ++TS LS RWK+LW+ V LD L C Q
Sbjct: 8 GFDRISELPESLISQILLHLPTKASVKTSVLSTRWKNLWLNVPGLD----LNCRDFPFQN 63
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+ + +D L F ++K +++ + + + + + A+ I
Sbjct: 64 NNEKL-LIDFIDRFLQFNNESRLQKFKVD--------YSRDKIIKFSDRIGDAISRGIRV 114
Query: 123 LNLSLHEVIFILPDC------------LFASKSLCKLKLTMYCVLRVPGSICFSCLKTLH 170
L++ + DC L++ K+L LKL+ Y L PG + CLK +H
Sbjct: 115 LDVESNTYYRDADDCIDYPCIEFMPLNLYSCKTLVSLKLS-YSGLEDPGFVYLPCLKFMH 173
Query: 171 LKYITFE--GEWSTQQLFLGCPVLEKLI 196
L+ + ++ G + ++L GCPVLE+LI
Sbjct: 174 LREVRWDSSGTMNLEKLVSGCPVLEELI 201
>AT1G78730.1 | Symbols: | F-box family protein |
chr1:29607840-29609441 REVERSE
Length = 420
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 41/274 (14%)
Query: 2 RGK-DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
RG D + LPD +L + LPTKDV++TS LS W ++W +V LD LG +
Sbjct: 18 RGHLDWLRKLPDSLLCQVFLNLPTKDVVKTSVLSSTWGNIWRSVPGLD----LGYGDFPE 73
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWM----FRVTMWVCAAL 116
+F+ VDS L F ++ +L + + K W VT W+ +
Sbjct: 74 YN-----AFVSFVDSFLGFNSESRLQNFKLNYQYLRLKYEWK-WTELDNANVTRWINTVI 127
Query: 117 KNKIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITF 176
K K+E L+LS D F++ P S+ C+K ++L + F
Sbjct: 128 KRKVEHLHLS---------DVTFSN----------------PESVSLPCVKVMYLDMVKF 162
Query: 177 EGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVE 236
+ + + L GCPVLE L + N+ + + SL + + C+ D + VV
Sbjct: 163 ANDLAFEMLISGCPVLESLTIKRSACDNVDYLRVCSQSLLSFTLVGHCN-EDMVKEQVVA 221
Query: 237 ISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV 270
I A L L + + N +SLV +D+
Sbjct: 222 IDAPRLEDLKLYCHETASFIIKNPASLVKMDIDI 255
>AT2G29910.1 | Symbols: | F-box family protein |
chr2:12751686-12752830 REVERSE
Length = 352
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 126/284 (44%), Gaps = 28/284 (9%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D+IS+LPD+ILG +LS LPTK T+ LSKRW +L V LD + +G
Sbjct: 4 RDLISSLPDEILGKVLSLLPTKRAASTAVLSKRWNNLPALVDKLDINDAIGGPG------ 57
Query: 64 EVRYSFLKLVDSAL-LFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
F + +D L L I++ L V +W+ C L +
Sbjct: 58 ----GFPEFIDKTLALLTNSTTIKRTSLNNEFQYGESQVNTWIRSFLERGCLQLYLNAQS 113
Query: 123 LNLSLHEVIFILPDCLFASKSLCKLKLTMYCV---LRVPGSICFSCLKTLHLKYITFEGE 179
L + + F S +L +L +T L PG + F LKTL L +TF
Sbjct: 114 L--------YTIDTEFFTSNTLVELTITGGFSPDGLLPPGGVFFPKLKTLSLVLMTFVDS 165
Query: 180 WSTQQLFLGCPVLEKLILYNCGWK--NIRRISIAIPSLRTL-IIDYDCSYPDDFLDCVVE 236
+ GCP+LE+ +L N + + ++ PS++ L I+ + +Y + C
Sbjct: 166 DMYELFISGCPLLEEFLLRNDEIEIPPVWNALVSSPSIKRLTIVHHFPNYREAHDGCWFR 225
Query: 237 ISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGALHNLK 280
NL L+ ++Y + + +L SLV A +D++ + L + K
Sbjct: 226 TP--NLVYLDYSSY-VPDWYEVDLGSLVEARLDLRSWERLRDEK 266
>AT4G26350.1 | Symbols: | F-box family protein |
chr4:13326853-13328315 FORWARD
Length = 431
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 19/197 (9%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
DIIS PD +L ILSF+PTKDVI TS LSKRW LW V L++ ++Q +
Sbjct: 2 DIISQCPDHLLLRILSFIPTKDVIVTSLLSKRWGSLWRWVPKLEYD-------FTRQNMR 54
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
F+K V +LL + L L+ + + + W+ A+ ++ +L
Sbjct: 55 ----FVKFVYRSLLQNNAPVLESLHLKNII----LYAECRTVDIGGWIDIAVSRRVRELE 106
Query: 125 LSLH--EVIFILPDCLFASKSLCKLKLTM-YC-VLRVPGSICFSCLKTLHLKYITFEGEW 180
+S++ + F LP L+ +L LT+ +C ++ VP ++C LK LHL+ I +
Sbjct: 107 ISINCSDEKFRLPSSLYTCGTLESFILTIKHCHLVDVPLAVCLPSLKKLHLRCIGWAYNA 166
Query: 181 STQQLFLGCPVLEKLIL 197
+ +L GC LE+L L
Sbjct: 167 TLLRLISGCTNLEELRL 183
>AT5G56560.1 | Symbols: | F-box family protein |
chr5:22899724-22901985 FORWARD
Length = 607
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 15/213 (7%)
Query: 7 ISNLPDDILGCILSFLPT-KDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEV 65
+S+LPD++L ILS LP K + T +S+RWK W V D+ F + + ++ E
Sbjct: 7 LSDLPDELLLKILSALPMFKVTLATRLISRRWKGPWKLVPDVTFDD----DDIPFKSFE- 61
Query: 66 RYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLNL 125
+F+ V + L + + +L L+ S + WV A+ + +L +
Sbjct: 62 --TFMSFVYGSFLSNDAQILDRLHLKLNQKYSASDI-------NFWVQVAVNRSVRELRI 112
Query: 126 SLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQQL 185
L LP CL + +L +L L C+ VP LKTLHL + F + +
Sbjct: 113 DLFGKTLELPCCLCSCITLKELTLHDLCIKVVPAWFRLPSLKTLHLLSVKFSSDGFVASI 172
Query: 186 FLGCPVLEKLILYNCGWKNIRRISIAIPSLRTL 218
CPVLE+L++ N++ ++ +P+LR+L
Sbjct: 173 LRICPVLERLVVDGTKGVNVKIPNMDVPNLRSL 205
>AT3G03030.1 | Symbols: | F-box family protein | chr3:682252-683850
FORWARD
Length = 474
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 19/273 (6%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D++S+LPDD+ ILSFL TK+ TS LSK+W++L+ V +LD + L T +
Sbjct: 2 DLVSSLPDDVRCHILSFLTTKESALTSVLSKKWRNLFTLVPNLDLDDSEYLHPEETKWER 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRK--LRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
E+ SFL V+ L + IR+ LR E +P + R+ W+C L+ +
Sbjct: 62 EEILDSFLDFVERVLSLQGNGPIRRFSLRCESGVPPA---------RLNRWLCKVLQRGV 112
Query: 121 EKLNLSLH-EVIFILPDCLFASKSLCKLKL--TMYCVLRVPGS--ICFSCLKTLHLKYIT 175
L L + E ++LP LF S++L L+L C+ PG+ L++L +
Sbjct: 113 ADLELIIDFEDGYLLPRELFVSETLVNLRLKSEFGCIHWWPGAEGTFLPRLQSLDISSAM 172
Query: 176 FEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVV 235
+ Q+L PV+E+L L W + ++++ +L ++ V
Sbjct: 173 VFCDDKLQKLLPCFPVIEELRLVGMEWID-SHVTVSCATLTNQLLLSSTGSRTSKNPKSV 231
Query: 236 EISAVNLTSLNCTNYLIFELSLCNLSSLVYAYV 268
NL SL ++ + + L N+ SL A +
Sbjct: 232 SFDTPNLLSLAYSDLVAEDYPLVNMKSLFKARI 264
>AT3G18150.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana
protein match is: F-box family protein
(TAIR:AT5G02910.1). | chr3:6217929-6219500 FORWARD
Length = 456
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS+LPD IL ILSF+PTK I TS LSKRW+H+W L F N
Sbjct: 31 DSISSLPDVILQHILSFIPTKLAITTSLLSKRWRHVWCDTPSLSF-NDYRLEAPFIDETL 89
Query: 65 VRYSFLKLV----DSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
RY+ K++ ++L+ P+ + W+ A+ +
Sbjct: 90 TRYTASKMMRFHLHTSLINNVPH------------------------LESWIKFAMSRNV 125
Query: 121 EKLNLSLHEVI---FILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFE 177
+ L+L L + F PD + SL +L + VL ++ CLK L+L
Sbjct: 126 DHLSLDLWNQVANKFKFPDFFHINSSLKQLTV----VLDFSDTMIAICLKKLYLSTCLLS 181
Query: 178 GEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPD 228
E S + GCP+LE L L +CG + +S ++ LRTL I+ + P+
Sbjct: 182 DE-SMANILFGCPILESLTLDHCGGLRVLDLSKSL-RLRTLEINCNIWVPE 230
>AT3G59000.1 | Symbols: | F-box family protein |
chr3:21799757-21801536 FORWARD
Length = 491
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 114/222 (51%), Gaps = 7/222 (3%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D + +LPD++L ILSFL TK+ TS LSKRW++L V +L F + L +
Sbjct: 2 DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPER 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
E+R SF+ VD L + I+K L+ R+ + V W+ V + L I
Sbjct: 62 DEIRQSFMDFVDRVLALQAESPIKKFSLKCRIGVDSDRVDGWISNVLNRGVSELDLLI-I 120
Query: 123 LNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLR-VPGSICFSCLKTLHLKYITFEGEWS 181
L +++ + + P FASK+L KL++ + V GSI LKTL L + F +
Sbjct: 121 LGMTMEDSYRLSPKG-FASKTLVKLEIGCGIDISWVAGSIFLPMLKTLVLDSVWFYVD-K 178
Query: 182 TQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYD 223
+ L L P LE+L+L + W + ++I+ SL+TL ID D
Sbjct: 179 FETLLLALPALEELVLVDVNWLD-SDVTISNASLKTLTIDSD 219
>AT5G56690.1 | Symbols: | F-box family protein |
chr5:22939723-22941099 FORWARD
Length = 402
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 108/230 (46%), Gaps = 14/230 (6%)
Query: 7 ISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEVR 66
IS LPDD+L IL+FLPTK I TS LSK+W+ LW+ + L + + +V
Sbjct: 4 ISGLPDDLLVKILAFLPTKVAISTSVLSKQWRFLWMWLPKLKYDDYDDI-TDGFNSVSAF 62
Query: 67 YSFLKLVDSALLFREPYCIRKLRLEPR-MPLSGFSVKSWMFRVTMWVCAALKNKIEKLN- 124
++ + L I L L R L +KS WV A+ + +L+
Sbjct: 63 QTYRDFIAKNLPLHRAPIIESLSLGFRCGTLQPEDLKS-------WVEVAVSRSVRELSI 115
Query: 125 LSLHEVIFIL-PDCLFASKSLCKLKLTMYCVLRVPGSIC-FSCLKTLHLKYITFEGEWST 182
L+ + + L L+ KSL LK + VP ++C L+TL LK + + E S
Sbjct: 116 LAYYRNNYALSSSSLYTCKSLVTLK-GFNIRVDVPPTVCLLPSLRTLELKRVRYLNEDSL 174
Query: 183 QQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTL-IIDYDCSYPDDFL 231
+ L CPVLE L + N+R + + +PSLR L + Y DD++
Sbjct: 175 RMLLSFCPVLEYLSIERHDNDNLRGLVVDVPSLRRLSLTSYTGCSSDDYV 224
>AT5G38390.1 | Symbols: | F-box family protein |
chr5:15366432-15368053 FORWARD
Length = 456
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 29/225 (12%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D++SNLP ++L ILSFL TK+ TS LSKRW++L V ++D + +
Sbjct: 2 DLLSNLPYELLCHILSFLTTKEAALTSVLSKRWRNLIAFVPNVDIVDH-----------D 50
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
+R F+ VD L + I K L+ SG RV W+ + + +LN
Sbjct: 51 IRELFMDFVDRVLALQGNSPINKFSLD----CSGVDSD----RVDCWIQNVMVRGVSELN 102
Query: 125 LSL-----HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGE 179
LS+ E + L +F +K L KL L+ L GSI LKTL L+ + E
Sbjct: 103 LSIFVDSVFEDDYNLFPKVFENKKLVKLGLSYISWL--DGSIFLPMLKTLVLESVLLSVE 160
Query: 180 WSTQQLFLGCPVLEKLILYNCGWK--NIRRISIAIPSLRTLIIDY 222
+ L P LE+L++ N WK ++ + ++ SL+TL I++
Sbjct: 161 -KFEILLHALPALEELVMNNIYWKERDVVDLIVSSESLKTLTINF 204
>AT3G58920.1 | Symbols: | F-box family protein |
chr3:21776293-21777988 FORWARD
Length = 470
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 32/288 (11%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D ISNLP++I+ I+SFL K+ S LSKRW++L+ V L+F + +V+
Sbjct: 2 DRISNLPNEIICHIVSFLSAKEAAFASVLSKRWQNLFTIVQKLEFDD----------SVK 51
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLE-----PRMPLSGFSVKSWMFRVTMWVCAALKNK 119
+ S + V+ L I K L R +G + + V +C LK
Sbjct: 52 NQGSLMDFVNGVLALPVTTRISKFSLRFDSFLKRKLETGLVIGPHV--VNRCLCNVLKRG 109
Query: 120 IEKLNLSLH-EVIFILPDCLFASKSLCKLKLT------MYCVLRVPGSICFSCLKTLHLK 172
+ L L ++ E ++LP +F K++ LKLT Y + +P + L++L LK
Sbjct: 110 VLDLKLEIYGEDGYLLPSEVFTCKTIVDLKLTSCIFAESYVIDVIPENAFLPGLESLFLK 169
Query: 173 YITFEG--EWSTQQLFLGCPVLEKLILYNCGWKNIR-RISIAIPSLRTLII---DYDCSY 226
I F + Q L CPVL+ L +Y+ W+ + +++ +L LII ++
Sbjct: 170 SIWFSDLRGCAFQTLLSACPVLKTLTIYDVQWEKWKWSRTVSSATLERLIIQRTEFTYFN 229
Query: 227 PDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFG 274
DF + +LT L +++ E + NL S+V A + + L G
Sbjct: 230 GSDFKS--ITFDTPSLTYLKYIDFVPEEYPVVNLDSIVEAKLHLILTG 275
>AT2G42720.1 | Symbols: | F-box family protein |
chr2:17785653-17787211 FORWARD
Length = 443
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 194/438 (44%), Gaps = 77/438 (17%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS+LPD+IL ILSFL TK+ TS+LS RWK++++ V L ++Q
Sbjct: 2 DRISSLPDEILEHILSFLSTKEAALTSSLSTRWKNVFVFVPSLHLD-------YARQHEN 54
Query: 65 VR--YSFLKLVDSALLFREPYCIRKLRLEPRMP-----LSGFSVKSWMFRVTMWVCAALK 117
R F+ V++ + I+KL L+ + + V+SW+ RV +
Sbjct: 55 PREFIDFVDFVNTLFNRKGNSPIKKLALKIHLKDNQSLQNQTHVQSWIHRVLS------R 108
Query: 118 NKIEKLNL--SLHEVIFILPDCLFASKSLCKLKLTMYCVLRV-PGSICFSCLKTLHLKYI 174
+ L+L + ++P +F S +L KL+L +++ ++ LKTL L +
Sbjct: 109 GGVTDLDLFITFKGKFQLVPLLIFKSNTLVKLRLGRGFTIKLCHENVYLPMLKTLCLDTV 168
Query: 175 TFEGEWST-QQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTL--------IIDYDCS 225
F+G+ + + L CP+LE+L+L + WK S++ PSL+ L II D
Sbjct: 169 DFDGDHNVFETLLPRCPLLEELVLEDQRWKQWCG-SVSSPSLKRLRIRFFHIPIISLDVP 227
Query: 226 ---YPDDFLDCVV--EISAVNLTSLNCT--NYLIFELSLCNL----SSLVYAYVDVQLFG 274
Y + L C+ + + VNL SL N+ + E L L S LV A + + L
Sbjct: 228 GLVYLE--LSCIFGSKYANVNLDSLVEARLNHWVEEQELRKLRDGSSHLVPADM-MDLIT 284
Query: 275 ALHNLKLLYVL*NCLVDFRV*N---PL---------------HFRIIPLSLQKSPNLESL 316
+ +K+L++ + L F P+ ++I+PL ++ SPNLE+L
Sbjct: 285 GIRKVKVLHLTSDALELFYFSGQELPMFDNLVYLSIASDKKQGWQILPLLIKNSPNLETL 344
Query: 317 NFFEF---------DPNICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLL 367
F D +C G + + R+K I ++ G + E+ M + L
Sbjct: 345 VFKGLEHYTTKQCGDACVC---SGILGKSSSCLSSSRVKVLEIWSYQGTSKELKQMGHFL 401
Query: 368 ENATVLERTRIVCVQMYQ 385
LE +I V Q
Sbjct: 402 MKLQFLELVKIRAVSNLQ 419
>AT5G38570.1 | Symbols: | F-box family protein |
chr5:15449279-15450601 REVERSE
Length = 379
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 167/411 (40%), Gaps = 84/411 (20%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D I+ LPDD+L ILSF+PT + T LSKRW+ LW+ + +L+F + +
Sbjct: 2 DNINGLPDDLLVKILSFVPTYVAVSTCVLSKRWEFLWMWLPNLEFVSPW----------D 51
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
R + ++ L I +L + S +K + W+ A+ + + +L
Sbjct: 52 SRPGIVDFINKKLPIHRAPVIERLCIHIN---SNPHIKPEY--IKRWIEIAVSHYVRELQ 106
Query: 125 LSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQQ 184
+ H K K+T+ L + +G++ QQ
Sbjct: 107 IDYHS----------------KTKITL----------------QLEAESYFIDGKY-LQQ 133
Query: 185 LFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTL-IIDYDCSYPDDFLDCVVEISAVNLT 243
L GCPVLE L L C N+R ++ IPSL++L + + S + + + + L
Sbjct: 134 LISGCPVLEDLSLRFCCNDNLREFTVIIPSLQSLSLFLFGNSNLNRYKIDTPSLKYLKLE 193
Query: 244 SLNCTNYLIFELSLCNLSSLVYAYVDVQ-------LFGALHNLKLLYVL*NCLVDFRV*N 296
N + S N+ L AYVDV+ L G++ ++K L + CL D+ +
Sbjct: 194 DWNDPEH----YSWTNMPKLREAYVDVESSNHLKTLIGSITSVKHLTIC--CLEDYLYGD 247
Query: 297 PLHF----------------RIIPLSLQKSPNLESLNFFEFDPN--ICFIGEGGISSNVP 338
F ++ L+ SPNL+ L+ FE N +C+ S+V
Sbjct: 248 GFIFNHLEHLKLCMCPFDSSNLLGQLLKGSPNLQVLDIFEMKRNDIVCW----NQPSSVL 303
Query: 339 HCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRIVCVQMYQKTRR 389
C LK S + G + + Y+L+NA L+ + + RR
Sbjct: 304 ECLLSSLKILNWSAYFGRPQDRDIAVYILKNACHLKTATFLTDKRINDVRR 354
>AT5G44490.1 | Symbols: | F-box family protein |
chr5:17924035-17925843 FORWARD
Length = 455
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 20/198 (10%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D++S L D ++ +L +LPTK+ + TS LS RWK +W+ + DLD +
Sbjct: 16 EDLMSKLTDALISQVLFYLPTKEAVSTSVLSSRWKSVWLLIPDLDLNS---------SAF 66
Query: 64 EVRYSFLKLVDSALLFR--EPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
+F+ +D + F E C+ KL+L R + VT W+ +K++
Sbjct: 67 PSNNAFVGFIDKFIDFSKIENSCLHKLKLSIRKEHENDNKSC----VTRWIGFVATHKLK 122
Query: 122 KLNLS----LHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFE 177
L++ + + ++P L+ +++L L+L + V SI CLKT+HL+ +
Sbjct: 123 HLDVECLLWKKKCLEVMPLTLYITQTLFYLRLHRVLLGNVE-SISLPCLKTMHLEQNVYA 181
Query: 178 GEWSTQQLFLGCPVLEKL 195
E + CPVLE L
Sbjct: 182 NETCLEFFISSCPVLEDL 199
>AT5G56700.1 | Symbols: | F-box protein-related |
chr5:22941991-22943378 FORWARD
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 162/416 (38%), Gaps = 111/416 (26%)
Query: 7 ISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEVR 66
IS+L D++L ILSFLPTK+ + TS GC C + + V
Sbjct: 4 ISDLSDELLVKILSFLPTKEAVSTSVCRNNGSFF-------------GCGCPNSSSTLV- 49
Query: 67 YSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLNLS 126
+KSW+ R+ + C + +L++S
Sbjct: 50 --------------------------------MDLKSWV-RIAVSRC------VRELSIS 70
Query: 127 LHEVIFI--LPDCLFASKSLCKLKL-TMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQ 183
LH+ LP L+ KSL LKL +L VP ++ LKTL L+ + + E S +
Sbjct: 71 LHDTTAAVSLPSSLYTCKSLVTLKLYGKKVLLDVPRTVFLPSLKTLQLERLRYSDEDSLR 130
Query: 184 QLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTL------------------------I 219
L CPVLE L + + N+R + + +PSL+ L +
Sbjct: 131 LLLSYCPVLEDLSIVREDYDNLRALVVIVPSLQRLSLEIPGNCSSDGYVIVTPSLKYFKV 190
Query: 220 IDY--DCSYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSL--------VYAYVD 269
+DY SY ++ + E+ ++ L L+ ++ S+ Y D
Sbjct: 191 VDYRESMSY---LIEQMPELEEADIVVLQYPEKLLESVTFFKRLSIRVIFNTYTETVYRD 247
Query: 270 VQLFGALHNLKLLYVL*NCLVDFRV*NPLHFRIIPLSLQKSPNLESLNFFEFDPNICFIG 329
+F L NLKL C+ N +++ L+ SPNL LN D +G
Sbjct: 248 GIVFNRLENLKL------CIC-----NGDWSKLLIQFLKDSPNLRVLNLL-VDDYPSSLG 295
Query: 330 E------GGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRIV 379
+ S+VP C L+TF + + G E + Y+ ++A L+ + I+
Sbjct: 296 DYEPVRWKNNKSSVPKCLLESLETFEFAGYIGTPEERDFLSYIFKHARCLKSSSIL 351
>AT4G22280.2 | Symbols: | F-box family protein |
chr4:11776368-11777517 REVERSE
Length = 332
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 150/347 (43%), Gaps = 55/347 (15%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D I+ L DDI+ ILS L K+ TS LS RW++L+ F+ L C Q V
Sbjct: 2 DRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFA------FRPNL---CLDDQEVG 52
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
SF+ VD L+ + IR++ ++ RM + V WM V L++ + L+
Sbjct: 53 GGDSFIDFVDRVLVVTGNFPIRRISIKCRMSIDTGHVTRWMVDV-------LEHGVSYLD 105
Query: 125 LSLHEVIF--ILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGE--W 180
+ + +P +F K+L +LKL VP + LKTL L I F
Sbjct: 106 IDIISEDDIGFVPLEIFTCKTLVELKLARGFYAMVPDYVSLPSLKTLFLSSIWFCNRDCC 165
Query: 181 STQQLFLGCPVLEKLILYNCGWKNIRRI-SIAIPSLRTLIIDYDCSYPDDFLDCVVEISA 239
+L CPVLE+L + W++I +++ +L+ L I Y ++ + I
Sbjct: 166 PLGRLLSACPVLEELTIIGGCWQHIEFCRTVSSSTLKKLTITSSFHY--EYWG--ITIDT 221
Query: 240 VNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ---------LFGALHNLKLLYV----L* 286
+L L ++ + NL SLV A + + L L N+++L +
Sbjct: 222 PSLAYLEYSDLVPRHFPFVNLESLVEAKLALDLCSDSNPTNLIKGLRNVEVLELSSGYTS 281
Query: 287 NCLVDFRV*NPL--------------HFRI---IPLSLQKSPNLESL 316
L DFR P+ H+ I +P+ L+KSP LE+L
Sbjct: 282 QILYDFREAIPVLSKLFRLSIKSNSRHYYIWNLLPILLEKSPKLETL 328
>AT5G44950.1 | Symbols: | F-box family protein |
chr5:18151665-18153164 FORWARD
Length = 438
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 21/273 (7%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
G+D IS LPD +L IL +L ++ IRTS LS RW+ LW+ V LD + +
Sbjct: 2 GRDRISELPDGLLNHILMYLHIEESIRTSVLSSRWRKLWLKVPGLDVNVH---DFPADGN 58
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+ F L+D L + + RL+ ++ M R W+ + I+
Sbjct: 59 L-----FESLMDKFL------EVNRGRLQNFKLNYESNLYYLMDRFVPWIATVVDRGIQH 107
Query: 123 LNLSLHE----VIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEG 178
L+++ + I +P + SK+L LKL + + CLK +HL+ I F
Sbjct: 108 LDVTATDCPPWTIDFMPANICKSKTLVSLKLVNVGLDTPKFVVSLPCLKIMHLEDI-FYS 166
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEIS 238
+ L GCPVLE L + + + + +L+ + +D + D VEI
Sbjct: 167 PLIAENLISGCPVLEDLTIVRNHEDFLNFLRVMSQTLKNFRLTFDWGMGSN--DFSVEID 224
Query: 239 AVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ 271
A L ++ + + + NLSSLV +D +
Sbjct: 225 APGLKYMSFRDSQSDRIVVKNLSSLVKIDLDTE 257
>AT5G03100.1 | Symbols: | F-box family protein | chr5:726832-727980
FORWARD
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFK-NKLGCNCTS 59
G G D IS+LPD+IL IL+ PTK IRTS LSKRWKH+W + N++ + +
Sbjct: 5 GGGVDFISSLPDEILHHILANTPTKLAIRTSVLSKRWKHVWYETPSISIVCNRVDPDSLN 64
Query: 60 KQTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNK 119
K +K D + S + + W+ AL K
Sbjct: 65 KTLSSYSTPKIKSFDVTI----------------------SRDVTVPEIDTWINLALSRK 102
Query: 120 IEKLNLSLHEVIFILPDCLFASKSLCKLKLTM-YCVLRVPGSICFSCLKTLHLKYITFEG 178
E ++L + D F + SL +L LT+ YC+L + +S L+ L L
Sbjct: 103 AENVSLRFTSH-YRFRDTFFINSSLKQLSLTLVYCILNPKCVVSWSSLRNLSLNRCKVSD 161
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFL------- 231
+ S ++ GC +LE L L C N +S ++ SLR L I D P+ +
Sbjct: 162 D-SIAKILTGCSLLESLTLNLCDRLNDLDLSKSL-SLRRLEILGDRWTPERIVAPHIRYL 219
Query: 232 --------DCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLFGALHNLKLLY 283
+V++S++ +L + + + + C + + Y+ Q L N+K L
Sbjct: 220 RLENYQRPSTLVDVSSLTEANLGLSKH-VLDYFTCEMETESLQYMVRQTVVKLQNIKKLT 278
Query: 284 V 284
+
Sbjct: 279 I 279
>AT5G25850.1 | Symbols: | F-box family protein |
chr5:9014082-9015917 FORWARD
Length = 481
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 31/204 (15%)
Query: 7 ISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEVR 66
+S L D ++ ILS LP K+V+ TS LS RWK++W++V L+ + N + ++ R
Sbjct: 22 LSQLSDPLICQILSHLPIKEVVTTSVLSTRWKNIWLSVPSLELIYSIFPNFNTFRSFGDR 81
Query: 67 YSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLNLS 126
+ DS + CI L+L F + +T W+ A + I +L +
Sbjct: 82 F-----FDSTRV----SCIHNLKLY-------FDEHDACY-LTSWINAFVTRNIRRLYVR 124
Query: 127 ------LHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
HE LP L+ ++L LKL + L P + CLK +HL Y+ F +
Sbjct: 125 RVRGNYFHE----LPLSLYVCETLVSLKL-FHLTLVDPEFVSLPCLKIMHLNYVWFPNDA 179
Query: 181 STQQLFLGCPVLEKL---ILYNCG 201
+ ++L CPVLE L +L+N G
Sbjct: 180 TFERLVSSCPVLEDLKIDVLWNDG 203
>AT1G22000.1 | Symbols: | F-box family protein |
chr1:7744189-7747123 FORWARD
Length = 727
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 179/415 (43%), Gaps = 72/415 (17%)
Query: 10 LPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEVRYSF 69
LPDD+L IL +PTK+ + TS LSK+W+++W+ + L+FK+ + E F
Sbjct: 34 LPDDLLLQILPHVPTKEAVATSILSKQWRYVWLMLPKLEFKD---------EGSESVGWF 84
Query: 70 LKLVDSALLFREPY--CIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLNLSL 127
+K S L + P C+ + L P P+ V WV A+ ++ L+ +L
Sbjct: 85 IK--KSLQLHKAPKLDCLI-VELGPHCPID--------VDVRKWVENAVNRDVKDLDFTL 133
Query: 128 --HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQQL 185
P L+ +L L L+ ++ V L L L Y+ ++ + S +L
Sbjct: 134 LWSAAPTSFPKSLYTCDTLVCLTLSNQILVDVSSPASLPSLLDLSLHYVVYKDDGSLVRL 193
Query: 186 FLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDY-------DCSYPDDFLDCVVEIS 238
PVL++L +++ N++ ++ + SL +L D + + D+ +D VE+
Sbjct: 194 LSSSPVLKRLSVHSHEDDNLKTFTVKVSSLESLNYDENWLKDEVEDNEVDEVVDNEVEVD 253
Query: 239 AVNLTSLNCTNYLIFELSLC---------NLSSLVYAYV------DVQLFGALHNLKLLY 283
+N SL + + EL L N+S L A++ D + +L ++K L+
Sbjct: 254 DLN-GSLVIDSPALKELHLSEVWDYCLIENMSFLDEAFISNVPYPDEKFLRSLSSVKHLF 312
Query: 284 VL*N-----CLVDFRV*NPLHFRIIPLS-----------LQKSPNLESL---NFFEFDPN 324
+L + C + + F P+S LQ SP L++ N FE
Sbjct: 313 LLFSKSMVACCNAIKFSWLIEFYFFPISLVDWLMPLMFLLQNSPKLKTPTIDNDFE---- 368
Query: 325 ICFIGEGGISSNVPHCFKHRLKTFFISNFSGNA-AEIHLMRYLLENATVLERTRI 378
C S++P C L+TF + G A+ LM Y+L N+ L+ I
Sbjct: 369 -CLSLSWNQPSSIPGCLLSHLETFRWRGYGGREDAKKLLMTYILANSKCLKTVEI 422
>AT2G26030.3 | Symbols: | F-box family protein |
chr2:11091505-11093000 REVERSE
Length = 442
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 30/283 (10%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D I LPD +L +LS+LPT D ++TS LSKRW+ LW+ V LD K S E
Sbjct: 4 DRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLK-------VSDFPDE 56
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
SF +D+ L F +RK +L+ ++ R+ WV + I+ L+
Sbjct: 57 NYASF---IDNFLEFNRKSRMRKFKLK----YDEYTYDDD--RLAGWVVTTVDRGIQHLD 107
Query: 125 LSLHE----VIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYI-TFEGE 179
E V +P ++ +L L L + + LK +HL+ + ++
Sbjct: 108 AKGFETNMCVREFMPQNIYKCNTLVSLMLVTVGIENPEFVVSLPSLKIMHLEDVWYYDDP 167
Query: 180 WSTQQLFLGCPVLEKLILYN----CGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVV 235
+++ GCPVLE +L C ++ + + SLR+ + ++ S + V
Sbjct: 168 LIMEKIISGCPVLEDFVLIRPIDFCNLDVLQFLRVRSLSLRSFRLTFEYSVSCTYFS--V 225
Query: 236 EISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL---FGA 275
EI A L LN + + + N++SL +D + FG
Sbjct: 226 EIDAPRLEYLNFNDDQSDTIVVKNMTSLSMIDIDSEFNVKFGG 268
>AT2G26030.1 | Symbols: | F-box family protein |
chr2:11091505-11093000 REVERSE
Length = 442
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 30/283 (10%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D I LPD +L +LS+LPT D ++TS LSKRW+ LW+ V LD K S E
Sbjct: 4 DRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLK-------VSDFPDE 56
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
SF +D+ L F +RK +L+ ++ R+ WV + I+ L+
Sbjct: 57 NYASF---IDNFLEFNRKSRMRKFKLK----YDEYTYDDD--RLAGWVVTTVDRGIQHLD 107
Query: 125 LSLHE----VIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYI-TFEGE 179
E V +P ++ +L L L + + LK +HL+ + ++
Sbjct: 108 AKGFETNMCVREFMPQNIYKCNTLVSLMLVTVGIENPEFVVSLPSLKIMHLEDVWYYDDP 167
Query: 180 WSTQQLFLGCPVLEKLILYN----CGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVV 235
+++ GCPVLE +L C ++ + + SLR+ + ++ S + V
Sbjct: 168 LIMEKIISGCPVLEDFVLIRPIDFCNLDVLQFLRVRSLSLRSFRLTFEYSVSCTYFS--V 225
Query: 236 EISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL---FGA 275
EI A L LN + + + N++SL +D + FG
Sbjct: 226 EIDAPRLEYLNFNDDQSDTIVVKNMTSLSMIDIDSEFNVKFGG 268
>AT1G05080.1 | Symbols: | F-box family protein |
chr1:1459091-1460579 FORWARD
Length = 439
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 18/272 (6%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D IS LP+D+L IL LPTKDV+ T LSKRW +W V L++ + + + SK++V
Sbjct: 12 EDRISVLPEDLLVVILDLLPTKDVVATMILSKRWLSIWTMVRTLEYTDDM--DDESKKSV 69
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLE--PRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
+ FL + +L + I L +E P+ P + + WV A+ +
Sbjct: 70 ---WWFL---NKSLQLHKAPVIDSLCMELGPQCPTTDD------VDIGKWVAKAVDCLVM 117
Query: 122 KLNLSL--HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGE 179
L + L LP L++ SL +L L+ ++ VP S L L L + ++ E
Sbjct: 118 TLTIKLLWSAGPTSLPKSLYSCTSLSELTLSDQILVNVPSSAYLPSLTELELICVVYKDE 177
Query: 180 WSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISA 239
S CPVLE L + N++ ++ +PSL L CS D D + ++A
Sbjct: 178 DSLVSFLSSCPVLEFLFVLRKIDDNVKTFTVKVPSLLELTYKNLCSDVVDNTDRCLVVNA 237
Query: 240 VNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ 271
+ + T+Y + S+ ++ L A +DV
Sbjct: 238 PAVNTCQITDYSLESFSIEDMPCLQDATIDVD 269
>AT3G59150.1 | Symbols: | F-box family protein |
chr3:21872729-21874422 FORWARD
Length = 509
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 179/447 (40%), Gaps = 73/447 (16%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D+ISNLP+D+L ILS+L TK+ TS LSKRW +L +++ LDF + + Q
Sbjct: 47 DVISNLPNDLLCRILSYLSTKEAALTSILSKRWSNLLLSIPILDFDDSVLLKPQKGQRKN 106
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKN-KIEKL 123
V F VD L R R+ + G V W+ +++ + L
Sbjct: 107 V--FFKAFVDRLLSQRVETSSHVQRVSLKCRQGGVEPDC----VIKWILTTVRDLGVLDL 160
Query: 124 NLSLHEVIFILPDCLFASKSLCKLKL-TMYCVLRVPGSICFSCLKTLHLKYITFEGEWST 182
+L + IF LP +F SK+L KL++ TM + + P + L +L L + F
Sbjct: 161 SLCIDFGIFHLPFNVFRSKTLVKLRIGTMIRLSQFPSDVVSPTLNSLVLDLVEFRDGDKV 220
Query: 183 Q--QLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLII--DYDCSYPDDFLDCVVEIS 238
+ Q+ L P L+ L ++ S + +L++L+ D D S P V
Sbjct: 221 EFRQILLAFPSLQSLRVHESNKWKFWNGSASSRTLKSLVYRSDDDSSAP----KPCVSFD 276
Query: 239 AVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ----------------------LFGAL 276
+L L+ ++ + + SLV A +D+ LF +
Sbjct: 277 TPSLVYLDYSDMVADKYENLKFDSLVEARLDLHLTAFQIMRKPNNIGIVSGDVTTLFKGI 336
Query: 277 HNLKLLYVL*NCLVDFRV*N---PLHFRIIPLSL-QKSPNLESLNFFEFDPN-------- 324
N+K+L + + L P+ +I LSL P+ F++ P+
Sbjct: 337 RNVKILCLSPDALEALYYRGEKIPMFNNLITLSLGSDKPHGSPFIFWKLLPSLLNNSLKL 396
Query: 325 --------ICFIGEG--GISSNVPH---CF----------KHRLKTFFISNFSGNAAEIH 361
+ ++ EG G+S P CF +K IS + G E++
Sbjct: 397 ETLIIKGLVHYVAEGWEGLSPMTPMSRLCFSWDTVSDSLSSSAMKVLEISGYKGTWQELN 456
Query: 362 LMRYLLENATVLERTRIVCVQMYQKTR 388
M+ L N + LE R+ M K R
Sbjct: 457 QMKRFLGNLSRLEVVRVYHKAMDDKER 483
>AT1G64540.1 | Symbols: | F-box family protein |
chr1:23966909-23968425 FORWARD
Length = 444
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 43/282 (15%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQ 61
++ ISNLPD+ILG ILS LPTK + TS LSKRW++L + V + D ++ G + +Q
Sbjct: 4 REFISNLPDEILGKILSLLPTKLGVSTSVLSKRWRNLILLVDNFDLEDSSTSGFSAFLEQ 63
Query: 62 TVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
TV A L P I++L L R S SW + E
Sbjct: 64 TV------------ARLNTCP--IKRLSLNGRH-YRFSSADSW-----------ISTAFE 97
Query: 122 KLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLR--VP--GSICFSCLKTLHLKYITFE 177
+ L LH L + +S +L KL L+ L+ VP G++ F LKTL L + +
Sbjct: 98 RGCLELHLQSQYLDTGILSSNTLVKLTLSDQIYLQGLVPHDGTVFFPALKTLSLGAVVAD 157
Query: 178 GEWSTQQLFLGCPVLEKL-ILYNCGWKNIRRISIAIPSLRTLIIDYD-----CSYPDDFL 231
+ + L GCPVL++L I C + S+ S++ L + + +Y D+
Sbjct: 158 RD-VYESLISGCPVLDELSIRDGCDDPPTWKKSVVNKSVKRLTVSFHHPMSAWAYEDNVW 216
Query: 232 DCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLF 273
+ ++ ++ Y I + + SLV A +D++L+
Sbjct: 217 FKTQSLVFLDYSAFVSQGYTIVD----RMDSLVEARLDLRLW 254
>AT3G26920.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant
structures; EXPRESSED DURING: 4 anthesis, C globular
stage, petal differentiation and expansion stage, E
expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G13965.1); Has 1853 Blast hits to 1457 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2;
Fungi - 2; Plants - 1849; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink). | chr3:9921241-9922429 FORWARD
Length = 340
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 29/284 (10%)
Query: 132 FILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQQLFLGCPV 191
F P L+ S++L L+L ++ VP +C L+TL+L + F + S L GC
Sbjct: 37 FKFPTSLYNSETLETLELYHCILIDVPFPVCLKSLRTLNLHEVEFVNDESVVNLLAGCIS 96
Query: 192 LEKLILYNCGWKNIRRISIAIPSLR--TLIIDYDCSY-------PD-----------DFL 231
LE L+++ N++ +IA+PSL+ T+I++Y + P D
Sbjct: 97 LENLVIHQTTDLNVKTFTIAVPSLQRLTVIVEYYEEFSVFVVNTPSLKYLKIEGIIVDDR 156
Query: 232 DCVVE-ISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV---QLFGALHNLKLLYVL*N 287
C++E + S+ ++ +FE L +L+S+ + V ++F Y L
Sbjct: 157 TCIIENTPELVEASIIDVSFKVFESILGSLASVQRLSLKVSLVEIFSLPPISNTFYHL-- 214
Query: 288 CLVDFRV*NPLHFRIIPLSLQKSPNLESLNFFEF--DPNICFIGEGGISSNVPHCFKHRL 345
++ P + ++ L L SPNL+ L F+F + NVP C L
Sbjct: 215 TYLELSTYKPKWWNLLTLMLDTSPNLQVLKIFDFMTSQEQRPWEKWNEPKNVPECLLLHL 274
Query: 346 KTFFISNFSGN-AAEIHLMRYLLENATVLERTRIVCVQMYQKTR 388
+TF + + G EI L +Y+L NA L++ +++ R
Sbjct: 275 ETFVWTCYEGKLENEIELAKYILRNARRLKKATFSIIEINPDKR 318
>AT3G58900.3 | Symbols: | F-box family protein |
chr3:21773030-21774074 FORWARD
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 15/222 (6%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D+ S+LP+++L ILSFL TK+ TS LSKRW++L+ V L+F + L ++
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+ SF+ VD L I+ L+ + + V W+C L +
Sbjct: 62 EGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDS-------DHVDRWICNVLARGVSD 114
Query: 123 LNLSLH-EVIFILPDCLFASKSLCKLKLTMYCVLRVPGS-ICFSCLKTLHLKYITF-EGE 179
L+L + ++ LP + S++L L++ L +C LKTL L G+
Sbjct: 115 LDLFIDFRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTLVLDSCWLCIGQ 174
Query: 180 WSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIID 221
+ Q L L CP LE+L + N WK+ ++++ L+ L ID
Sbjct: 175 F--QILLLACPALEELDMTNTRWKD-SNVTVSSSILKELTID 213
>AT3G58900.2 | Symbols: | F-box family protein |
chr3:21773030-21774013 FORWARD
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 21/225 (9%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D+ S+LP+++L ILSFL TK+ TS LSKRW++L+ V L+F + L ++
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+ SF+ VD L I+ L+ + + V W+C L +
Sbjct: 62 EGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDS-------DHVDRWICNVLARGVSD 114
Query: 123 LNLSLH-EVIFILPDCLFASKSLCKLKLTMYCVLRVPGS-ICFSCLKTLHLKYITFEGEW 180
L+L + ++ LP + S++L L++ L +C LKTL L + W
Sbjct: 115 LDLFIDFRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTLVL-----DSCW 169
Query: 181 ----STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIID 221
Q L L CP LE+L + N WK+ ++++ L+ L ID
Sbjct: 170 LCIGQFQILLLACPALEELDMTNTRWKD-SNVTVSSSILKELTID 213
>AT3G58900.1 | Symbols: | F-box family protein |
chr3:21773030-21774013 FORWARD
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 21/225 (9%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D+ S+LP+++L ILSFL TK+ TS LSKRW++L+ V L+F + L ++
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+ SF+ VD L I+ L+ + + V W+C L +
Sbjct: 62 EGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDS-------DHVDRWICNVLARGVSD 114
Query: 123 LNLSLH-EVIFILPDCLFASKSLCKLKLTMYCVLRVPGS-ICFSCLKTLHLKYITFEGEW 180
L+L + ++ LP + S++L L++ L +C LKTL L + W
Sbjct: 115 LDLFIDFRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTLVL-----DSCW 169
Query: 181 ----STQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIID 221
Q L L CP LE+L + N WK+ ++++ L+ L ID
Sbjct: 170 LCIGQFQILLLACPALEELDMTNTRWKD-SNVTVSSSILKELTID 213
>AT1G78840.1 | Symbols: | F-box family protein |
chr1:29639290-29640817 REVERSE
Length = 439
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 165/420 (39%), Gaps = 67/420 (15%)
Query: 2 RGKDIISNL-PDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
KD+IS L PD +L IL L TKD ++TS LS RW+++W V LD
Sbjct: 2 ENKDLISQLLPDHVLHEILLKLATKDSVKTSILSTRWRYIWQRVPGLDLNQ--------- 52
Query: 61 QTVEVRYSFLK-LVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNK 119
RY LK V+ L + I +L+LE G ++ WV + +
Sbjct: 53 --TNFRYKGLKGFVNRFLDLDKKSLIYQLKLE----FDGRKYETEGSLFNKWVDSVVTRG 106
Query: 120 IEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGE 179
++ +L + LP + ++L LKL + S+ L+T+HL + F E
Sbjct: 107 VQ--HLVNNYCPIKLPGSISMCETLVHLKLVEVGIDSF-DSVSLPRLETMHLLSVWFSSE 163
Query: 180 WSTQQLFLGCPVLEKLILYNCGW--KNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEI 237
+ ++L PVL+ L + W + IR S + SLR I D + D + I
Sbjct: 164 AALERLISSSPVLQVLYIEKV-WNVEVIRVRSQTLYSLRMRIWKRDLDWNKDLTKIGLVI 222
Query: 238 SAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ--------------------LFGALH 277
A L SLN + +L L ++ S + + + +
Sbjct: 223 DAPRLKSLNLQIHRFKDLVLNSVCSPLKVDISISKGEFNPINSLTMKTLRTFIAWISNVT 282
Query: 278 NLKLLYVL*NCLVDFRV*NPLH----------------FRIIPLSLQKSPNLESLNFFEF 321
NL L Y + + PL +++P L PNL+SL +
Sbjct: 283 NLALNYCCLEAMYAYSSSEPLPQFSNLTHLEVSMDSSCLKLLPTFLASCPNLKSLELWVH 342
Query: 322 DPNICFIGEGGISSNVPHCFKHRLK------TFFISNFSGNAAEIHLMRYLLENATVLER 375
D + + S +P C LK T IS+ N E L++Y+L NA V++
Sbjct: 343 DHRLDILDIS--RSTMPKCLLISLKFVTIYSTAMISSSVENQVETELVKYILGNAAVVKE 400
>AT3G59250.1 | Symbols: | F-box family protein |
chr3:21901726-21903284 REVERSE
Length = 425
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 123/271 (45%), Gaps = 45/271 (16%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
KD ISNLP+ ++ ILSFLP +D TS LSKRW++L+ F+ L
Sbjct: 6 KDKISNLPEALICHILSFLPIEDSALTSVLSKRWRYLFA------FRPNL---------- 49
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
+F + C+R P G V VT W+ L+ + L
Sbjct: 50 --------------VFDDSVCLR--------PPCGHGVIP--DYVTSWILNVLERGVLDL 85
Query: 124 NLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICF-SCLKTLHLKYITF-EGEWS 181
+L ++ LP +F SKSL +L++ V + F LK+L+L I +GE
Sbjct: 86 DLQVNVNGVRLPSKVFVSKSLVRLRIESGNVRGIDVDDVFLPKLKSLYLHTIMLGKGEDC 145
Query: 182 TQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVN 241
++L GC VLE+L+L N + N+ S++ +L+ L + C+ D V N
Sbjct: 146 FEKLTSGCHVLEELVLNNV-YSNVWNRSVSSKTLKRLTL--WCTESYDKNPHSVLFDTPN 202
Query: 242 LTSLNCTNYLIFELSLCNLSSLVYAYVDVQL 272
L L ++Y+ + N SSLV A + + +
Sbjct: 203 LVYLKYSDYVAAKYPKVNFSSLVDATIGLAM 233
>AT5G44940.1 | Symbols: | F-box family protein |
chr5:18149369-18150892 FORWARD
Length = 377
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 165/387 (42%), Gaps = 66/387 (17%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D IS PD +L IL LPTKD ++TS LSKRW++LW+ V L +L
Sbjct: 5 DYISEFPDCLLTQILLNLPTKDSVKTSVLSKRWRNLWLNVPGL----RLRTFDFPVFPYP 60
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
F++ +D + F+ C +L+ + ++ F + R+ + + I+ L
Sbjct: 61 YEEGFVRFMDRFMEFK---CRSRLQ---KFMITYFEHNGYRDRLMELIGTLVDRGIQHLY 114
Query: 125 LSLH---EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWS 181
+ +H V FI + ++ SK+L LKL + + CLK L L+ I F GE
Sbjct: 115 VYMHTCNRVDFIRQN-IYKSKTLVSLKLYNVELKNPEFVVSLPCLKILKLENI-FHGEDG 172
Query: 182 ---TQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSL---RTLIIDYDCSYPDDFLDCVV 235
++L GCPVLE L L N+ S+ P R +I D+
Sbjct: 173 PLVVEKLISGCPVLEDLELIRPFDDNVGYGSLTAPKYSRNRDIIGDF------------- 219
Query: 236 EISAVNLTSLNCTNYLIFELSLC-NLSSLVYAYVDVQLFGALHNLKLLYVL*NCLVDFRV 294
LT ++ + I +C + S ++Y+Y + G + LY L +
Sbjct: 220 ------LTVISSVRHTI----ICYSTSKMLYSY--SKQLGPIPQFHNLYHLQARFSSSSL 267
Query: 295 *NPLHFRIIPLSLQK---SPNLESLNF-FEFDP-NICFIGEGGISSNVPHCFKHRLKTFF 349
+++P L+ PNL++L F F+P NI F VP C L+
Sbjct: 268 ------QLLPTFLESCPACPNLKNLIMEFPFEPKNIDF-------HKVPQCLISTLEYVQ 314
Query: 350 ISNFS-GNAAEIHLMRYLLENATVLER 375
I + I L+ Y LEN+ VL++
Sbjct: 315 IEELILKEKSGIKLVDYFLENSAVLKK 341
>AT3G44080.1 | Symbols: | F-box family protein |
chr3:15835632-15837126 REVERSE
Length = 387
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 168/380 (44%), Gaps = 50/380 (13%)
Query: 10 LPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKL---GCNCTSKQTVEVR 66
LPD++L ILS L TK + TS LSKRWK L+ V +LD + + + + +++
Sbjct: 12 LPDELLVEILSSLTTKQAVSTSLLSKRWKTLYSLVHNLDIDDYILFHREDGYHRYRPDIQ 71
Query: 67 YSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLNLS 126
SF V+ L FR I+ L+ R L F + + V W+C AL+ + +L+L
Sbjct: 72 KSFEDFVERTLAFRG--HIKTFSLKSR-ELYAFGLGVDV--VNRWICNALERGVSELHLC 126
Query: 127 LHEVIFILPDCLFASKSLCKLKLTMYCV-LRVPGSICFSCLKTLHLKYITFEGEWSTQQL 185
++ F LP F S +L L L V ++P LK L L I F+ + + +
Sbjct: 127 INSQ-FELPYKFFTSTTLVMLSLGRGLVCSKIPPETSLPVLKILFLYSIWFK-DLTRHVV 184
Query: 186 FLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAV-NLTS 244
L L + +C ++ ++++ + LR Y ++ + IS + N+ +
Sbjct: 185 DLYYSDLPRRKAPHCHLDSLAKVTLDLHYLR-----YGYQKVQNYANVKNIISEIRNVKT 239
Query: 245 LNCTNYLIFELSLCNLSSL-VYAYVDVQLFGALHNLKLLYVL*NCLVDFRV*NPLHFRII 303
L+ T+ + +S+C L V+ + +F + H +++
Sbjct: 240 LHLTSSAVEVISVCRKDGLPVFNNLVELMFSS--------------------RKRHRKVL 279
Query: 304 PLSLQKSPNLESLNF-----FEFDPNICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAA 358
PL L++SPNLE+L + + F+G ++N ++K + G+A
Sbjct: 280 PLLLERSPNLETLILSDLYRYTYGRRHRFVGIQIPANN-------KIKMLSFMQYQGSAT 332
Query: 359 EIHLMRYLLENATVLERTRI 378
E+ + +LL LE ++
Sbjct: 333 ELKHISHLLLKMECLEVVKV 352
>AT4G13960.1 | Symbols: | F-box family protein |
chr4:8060681-8062231 REVERSE
Length = 434
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 9/123 (7%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D +S+LPD++L ILSFL TK+ TS LSKRW++L+ V +LD + L +
Sbjct: 2 DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKEDR 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
E++ SF+K VD L + I+KL L+ R +GF RV W+ AL + +
Sbjct: 62 YEIQKSFMKFVDRVLALQGNSPIKKLSLKLR---TGFDSH----RVDGWISNALARGVTE 114
Query: 123 LNL 125
L+L
Sbjct: 115 LDL 117
>AT1G66320.1 | Symbols: | F-box family protein |
chr1:24727041-24728614 REVERSE
Length = 457
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 17/273 (6%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
G + +LP+ +L +L +PTKD+++TS +S W+HLW V LD + T
Sbjct: 26 DEGDWVRRDLPESLLFQVLLNIPTKDLVKTSVVSPEWRHLWRCVPGLDLDE---ADFTQF 82
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIR--KLRLEPRMPLSGFSVKSWMFRVTMWVCAALKN 118
T+ + +DS L + KLR+ + + M R W+ A ++
Sbjct: 83 DTL------VSFIDSFLSINRESSLNKFKLRIYCNHDRDKETNNAHMAR---WISAIVEQ 133
Query: 119 KIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEG 178
++ ++L+ V +P L+ +SL L+L VL + +K L L+++ F
Sbjct: 134 NVQHVDLTWLPV--EVPPILYLCESLVTLRLCG-VVLANLEFMYLPLVKVLALEWVIFAN 190
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEIS 238
E + ++L GC VLE L C N+ + + SL + S F D V I
Sbjct: 191 ELALEKLISGCLVLESLRFCKCSLDNVNVLRVRSQSLLSFNYYGPSSRDLHFKDLAVTID 250
Query: 239 AVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ 271
A L L ++ + + LSSLV A + V+
Sbjct: 251 APKLEILKLSHQVTSSFIIKKLSSLVEANIKVE 283
>AT4G13985.1 | Symbols: FBD1 | FBD1 (FBD-ASSOCIATED F-BOX PROTEIN) |
chr4:8080118-8081669 REVERSE
Length = 459
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 180/438 (41%), Gaps = 91/438 (20%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
G D + NLPD +L IL LPTKDV++ S LS+RW+++W V LD + C
Sbjct: 15 GDRVDRLRNLPDCLLFKILLNLPTKDVVKLSVLSRRWRNVWRYVPGLDLE------CGDF 68
Query: 61 QTVEVRYS-----FLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAA 115
E S L V L F C++K +L +++ F T W A
Sbjct: 69 MVREYYDSSEFNALLGFVYRFLGFNSESCLQKFKLTVNW-YDDVQLETVHF--TEWFNAV 125
Query: 116 LKNKIEKLNL-----SLHEVIFILPDCLFASKSLCKLKL-TMYCVLRVPGSICFSCLKTL 169
+K K++ L++ EV ++P +F SL L L +Y R + LK +
Sbjct: 126 VKRKVQHLHILDKTWGRDEV--VIPPTVFTCGSLISLNLYDVYLPNR--EFVSLPSLKVI 181
Query: 170 HLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYD-CSYPD 228
L + F+ +++ + L GCPVLE L + N+ IS ++ ++ + + D
Sbjct: 182 VLDAVVFDEDFAFEMLVSGCPVLESLSVNKI---NLNDISESVQVSSQSLLSFSYVADDD 238
Query: 229 DFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVD------------------- 269
D+L+ V++ ++ LN F + N SL+ A +D
Sbjct: 239 DYLEVVIDAPRLHYLKLNDKRTASFIMK--NHGSLLKADIDFVFNLGSEYMFDPNYLPTR 296
Query: 270 -------VQLFG------ALHNLKLLYVL*NC---------------LVDFRV*NPLHFR 301
V L G + L+++Y C D+R +
Sbjct: 297 HIIRDFLVGLSGVKDMIISSSTLQVIYDYSRCEQLPLFRNVSFLRVEFADYR------WE 350
Query: 302 IIPLSLQKSPNLESLNF-FEFDPNICFIGEGGISSNVPHCFKHRLKTFFISN-FSGNAAE 359
++P+ L+ PNL+SL F P EG P F L+ I+ + A+E
Sbjct: 351 MLPIFLESCPNLKSLVLGFSIPPG----KEGANILPGPRRFLTSLEYVKIAKPMAAEASE 406
Query: 360 I--HLMRYLLENATVLER 375
I L+ Y LEN+T+L++
Sbjct: 407 IKLKLVSYFLENSTILKK 424
>AT3G49150.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: protein insertion into membrane; LOCATED
IN: integral to membrane; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566), 60 kDa inner membrane insertion
protein (InterPro:IPR001708), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G59240.1); Has
1228 Blast hits to 1197 proteins in 21 species: Archae -
0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 1199;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:18218858-18221877 FORWARD
Length = 630
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 45/288 (15%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK---LGCNCTSK 60
KDIIS+LP+ ++ ILSFLP +D TS LSK+W+HL+ +L+F + L +
Sbjct: 15 KDIISDLPEALICHILSFLPIEDSALTSVLSKKWQHLFAFRPNLEFDDAVVYLNPDGERN 74
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
+T+ F VD L + Y I K L R F+ + + R W+ ++ +
Sbjct: 75 ETI-----FENFVDRVLSLQGDYPINKFSLTCR----DFTDPTCVSR---WISNVMERGV 122
Query: 121 EKLNLSLHEVIF----ILPDCLFASKSLCKLKL-TMYCVLRVPGSICFSCLKTLHL-KYI 174
L+L +++ +P +F SK+L L++ T + LKTL+L K +
Sbjct: 123 SDLDLRC--IVYWDNGTMPPDIFVSKALVHLRIETGNGAFIDVEDVFLPNLKTLYLNKVL 180
Query: 175 TFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCV 234
+ +L C VLE L + N W + S++ +L+ L + C
Sbjct: 181 LRHSDNGFVKLITSCHVLEDLFIMNICWDGYLKRSLSSKTLKRLT--FFCE--------- 229
Query: 235 VEISAVNLTSL--NCTNYLIFELSLC--------NLSSLVYAYVDVQL 272
++ AVN S+ + N + F C N SLVYA + +Q+
Sbjct: 230 -DVHAVNPESVSFDTPNLVYFVYHDCVADKYKNMNFDSLVYASICLQM 276
>AT4G10410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: F-box family protein
(TAIR:AT4G10400.2); Has 667 Blast hits to 646 proteins
in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr4:6448983-6449998 REVERSE
Length = 263
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 19 LSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEVRYSFLKLVDSALL 78
+S PTK + TS LSKRW+ LW+ ++ L+F ++L K S +D L
Sbjct: 1 MSLAPTKVAVSTSILSKRWEFLWMWLTKLEFGDELYSESEFK-------SLQCFLDRNLP 53
Query: 79 FREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLNLSLHEVIFILPDCL 138
I RLE LSG R MWV + + +L + E ILP L
Sbjct: 54 LHRAPVIESFRLE----LSGLYFNPEDIR--MWVVVVVSRYVRELEIYCPEKQHILPSSL 107
Query: 139 FASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQQLFLGCPVLEKLIL- 197
+ KSL LKL +L VP +C L+TL LK T + + + P LE L
Sbjct: 108 YTCKSLVILKLDGGIILDVPPMVCLPSLRTLELKGYTCD----VDEFVIDTPSLEYFKLE 163
Query: 198 ------YNCGWKNIRRISIAIPSLRT 217
+ C +N+ ++++A +R+
Sbjct: 164 DRNYDSHPCLIENMPKLTVAYVDVRS 189
>AT3G59170.1 | Symbols: | F-box family protein |
chr3:21878167-21879799 FORWARD
Length = 473
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 37/299 (12%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSK 60
KD+I+ LPD +L ILSFL TK+ TS LS+RW++L V +L+F + L + K
Sbjct: 5 SKDMINVLPDALLCHILSFLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSVYLHRDKRVK 64
Query: 61 QTVEVR--YSFLKLVDS-----ALLFREPYCIRKLRLEPRMPLSGFSVKSWMFR------ 107
T+ + F+ LV++ + F + + R L L+ PL FS+K
Sbjct: 65 NTLHEKGFVGFVLLVNNKRKKLSTSFPD-FVDRILALQGNSPLDKFSLKMVDGHDPVDPD 123
Query: 108 -VTMWVCAALKNKIEKLNLSLHEVIFI---LPDCLFASKSLCKLKLTMYCVLRVP-GSIC 162
V W+ L + L+L + + LP +F S++L KL + + + +
Sbjct: 124 SVVPWIHKVLVRGVSDLHLVVDMNEWTSDPLPSRIFLSETLVKLTIKIRDGPFIDVKHVH 183
Query: 163 FSCLKTLHLKYITF-EGEWSTQQLFLGCPVLEKLILYNCG---WKN-------IRRISIA 211
LKTL+L+ + F E + ++L GCPVLE+L+L G W + ++R++
Sbjct: 184 LPKLKTLYLQSVMFDENDIGFRKLLSGCPVLEELVLDGMGSCVWTSFTVSVATLKRLTFC 243
Query: 212 IPSLRTLIIDYDCSYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV 270
+ + +D P++ V NL L + N LV A +D+
Sbjct: 244 CQKMSSFGYMHDDENPNN-----VSFDTPNLVYLEYAQVIANNYPKVNFDLLVEAKIDI 297
>AT5G02930.1 | Symbols: | F-box family protein | chr5:682577-684480
FORWARD
Length = 469
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
G D IS+LPD +L I S++PT+ IRTS LSKRW+H+W L F
Sbjct: 26 GVDSISDLPDAVLQHIFSYIPTELAIRTSVLSKRWRHVWSETPHLSF------------- 72
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
E KL++ L I+ L R +S ++ V + A+ + ++
Sbjct: 73 -EWLKVSPKLINKTLASYTASKIKSFHLCTR-----YSYEADTHHVNSSIEFAMSHNVDD 126
Query: 123 LNLSLHE--VIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEW 180
L+L+ + DC + + SL +++L Y L + ++ LK L L T E
Sbjct: 127 LSLAFRRCSPFYNFDDCFYTNSSLKRVELR-YVDLMPRCMVSWTSLKNLSLTDCTMSDE- 184
Query: 181 STQQLFLGCPVLEKLILYNC 200
S ++ GCP+LE L L C
Sbjct: 185 SFLEILSGCPILESLSLKFC 204
>AT4G13965.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G55030.1); Has 1305 Blast hits to 1279
proteins in 17 species: Archae - 0; Bacteria - 4;
Metazoa - 2; Fungi - 4; Plants - 1281; Viruses - 0;
Other Eukaryotes - 14 (source: NCBI BLink). |
chr4:8066138-8067435 REVERSE
Length = 376
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 34/299 (11%)
Query: 120 IEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGE 179
+ KL L + F +P+ L+ ++L L+L ++ VP SIC L+TLHL Y+ F+
Sbjct: 64 LRKLVLEVDGGRFSIPESLYNCETLDTLELKYSILMDVPSSICLKSLRTLHLHYVDFKDN 123
Query: 180 WSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISA 239
S L GCP LE L+++ + +++ +IA+ SL+ L I Y S D V I++
Sbjct: 124 ESALNLLSGCPNLENLVVHRYPFSSVKTYTIAVSSLKRLTI-YTSSTVDPRAGYV--INS 180
Query: 240 VNLTSLNCTNYLIFELSLCNLSSLVYA-------YVDVQLFGALHNLKLLYVL*NCL-VD 291
+LT L + F L + N+ LV A ++ L +L ++K L++ + L +
Sbjct: 181 PSLTYLKIVGQIGFCL-IENVPELVEASMIVSSQIINKNLLESLTSVKRLFLEFSPLMIK 239
Query: 292 FRV*NPLH--------------FRIIPLSLQKSPNLESLNFFEFDPNIC-----FIGEGG 332
F + + ++ L L SP L+ L P +G+
Sbjct: 240 FPAGSIFYQLVYLELLTHEAECLNLLTLMLNSSPKLQILKL--LSPKYQSWKKDVVGKWN 297
Query: 333 ISSNVPHCFKHRLKTFFISNFS-GNAAEIHLMRYLLENATVLERTRIVCVQMYQKTRRK 390
VP C L+TF + E + +Y+L N L+R + + R K
Sbjct: 298 KPKIVPECLLFHLETFMWKGYEWKRNDETEVAKYILSNTNRLKRATFFSKPISSEERVK 356
>AT3G59160.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G59170.1); Has
1270 Blast hits to 1227 proteins in 8 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1270;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:21875023-21876641 FORWARD
Length = 464
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 26/238 (10%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSK 60
KD+I++LPD +L +LS+L TK+ TS LS+RW++L V +L+F + L + K
Sbjct: 11 SKDMINDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSAYLHRDKRVK 70
Query: 61 QTVEVR--YSFLKLVDS-----ALLFREPYCIRKLRLEPRMPLSGFSVKSWMFR------ 107
+ + F+ VD + F + + R L L+ PL FS+K
Sbjct: 71 NPLHEKGLVGFVLTVDDKRKKLSTSFPD-FVDRILDLQGNSPLDKFSLKMVDDHDPVDPD 129
Query: 108 -VTMWVCAALKNKIEKLNLSLHEVIFI-LPDCLFASKSLCKLKLTMYCVLRVP-GSICFS 164
V W+ L + L+L + + LP +F +++L KL L + + +
Sbjct: 130 CVAPWIHKVLVRGVSDLHLVIDMNEWTSLPAKIFLTETLVKLTLKIRDGPPIDVKHVHLP 189
Query: 165 CLKTLHLKYITF-EGEWSTQQLFLGCPVLEKLILYN---CGWKNIRRISIAIPSLRTL 218
LKTLHL+ + F E + +L GCP LE+L+L++ C W + S+++ +L+ L
Sbjct: 190 KLKTLHLESVMFDEEDIGFSKLLSGCPELEELVLHHIWSCVWTS---CSVSVATLKRL 244
>AT1G60400.1 | Symbols: | F-box family protein |
chr1:22254405-22255798 FORWARD
Length = 403
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 122/284 (42%), Gaps = 37/284 (13%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
G G D +S LP+ +L ILS L TKD +RTS LSK W++LW+ V L+ + TS
Sbjct: 10 GSGIDRLSALPEHLLCRILSELSTKDSVRTSVLSKHWRNLWLHVPVLELE-------TSD 62
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSV-----KSWMFRVTMWVCAA 115
L+FRE + R + + + L F + W +
Sbjct: 63 ------------FPDNLVFRE-FIDRFVGFDKEIDLKSFDIFYDVNVLWYDDFLWMIDDV 109
Query: 116 LKNKIEKLNLS-----LHEVIFILPDCLFASKSLCKLKLTMYCVLRVPG-SICFSCLKTL 169
+K ++ L ++ ++E + +P L++ +L L L+ + +P S+C +KTL
Sbjct: 110 VKRRVCDLMVTNNPYVVNEKLVKMPISLYSCATLVNLNLSFVAMNNLPSESVCLPRVKTL 169
Query: 170 HLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDD 229
+L + +G+ L C VLE L + + + S+++ I+ C Y D
Sbjct: 170 YLHGVKLDGDSILGTLVSSCSVLEDLTVVTHPGDYEKVVCFRSQSVKSFTIESQCEYKDP 229
Query: 230 FLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQLF 273
VEI L + Y + ++ YA VDV +F
Sbjct: 230 N----VEIDCPRLEYMCIREYQSESFVVHSIGP--YAKVDVDIF 267
>AT5G44960.1 | Symbols: | F-box family protein |
chr5:18153852-18155391 FORWARD
Length = 416
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D I+ LPD +L IL L TKD ++TS SKRW++LW+ V LD + N ++
Sbjct: 5 DYINELPDSLLTQILLDLRTKDSVKTSVSSKRWRNLWLNVPGLDLFSLQFTNPHHEE--- 61
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
+K +D F E C +L+ + + F + R + + I+ L
Sbjct: 62 ---GLIKFMDR---FMESNCRSRLQ---KFMIRYFECNGYRDRFMELIGTVVDCGIQHLY 112
Query: 125 LSLH---EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITF--EGE 179
+ +H V FI + ++ SK+L LKL + + CLK L L I + +G
Sbjct: 113 VYMHTCNRVDFIRQN-IYKSKTLVSLKLYNVELKNPDFVVSLPCLKILKLMKICYGEDGP 171
Query: 180 WSTQQLFLGCPVLEKLIL 197
++L GCPVLE L L
Sbjct: 172 LVVEKLISGCPVLEDLEL 189
>AT3G56780.1 | Symbols: | F-box family protein |
chr3:21031613-21033202 FORWARD
Length = 431
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 7 ISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEVR 66
I+ LPDD++ ILSF+ TK V+ TS LSK+WK LW V L K V
Sbjct: 9 INELPDDLILKILSFVSTKHVVVTSLLSKKWKSLWTRVPIL------------KYDVRDH 56
Query: 67 YSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKN---KIEKL 123
F + +D +L + + + L +E SV W + W+ AL + + +L
Sbjct: 57 TRFERFLDKSLFSHQSHVLESLHVE-------LSVTLWNKDIGPWIRTALHHHHCHLREL 109
Query: 124 NLSLHEVIFILPDCLFASKSLCKLKLTMYCV-LRVP-GSICFSCLKTLHLKYITFEGEWS 181
+ V +LP LF K+L LKL + + P ++ LKTLH+ + + S
Sbjct: 110 EIDACIVHTVLPPELFTCKTLVVLKLKGIVIDVEAPLTTVSLPSLKTLHIDHSSLFDFGS 169
Query: 182 TQQLFLGCPVLEKLIL 197
Q L C + L++
Sbjct: 170 LQMLLSNCNFITDLMV 185
>AT1G16940.1 | Symbols: | F-box family protein |
chr1:5791983-5793491 FORWARD
Length = 434
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 176/410 (42%), Gaps = 75/410 (18%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
G +II+ LPD +L I LPT++V++TS + +RW+++W ++ LD N
Sbjct: 9 GHNIINQLPDSLLCEIFFNLPTEEVVKTSLICRRWRYVWQSLPGLDLVINGSKNYDKFDF 68
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+E R+ FL+ R++ R G + ++ +M + +K+KI+
Sbjct: 69 LE-RFMFLQ-----------------RVKLRYVGYGHNCRNM---TSMMMNNVIKHKIQH 107
Query: 123 LNLS-----LHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFE 177
L++ +++ + I P + + L LKL + + P S+ CLK + L+ I F
Sbjct: 108 LDVGSNRRYVYDRVEIPPTIYTSCERLVFLKLHRANLPKSPDSVSLPCLKIMDLQKINFV 167
Query: 178 GEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEI 237
++L CP LE L + ++ A S ++L+ + +L V +
Sbjct: 168 DSLDMEKLVSVCPALETLTM--------DKMYGAKVSSQSLLSFCLTNNETGYLKTQVVM 219
Query: 238 SAVNLTSLNCTNYLIFELSLCNLSSLVYAYV-DVQLFGA--LHNLKLLYVL*NCLVDFRV 294
L L I + + +LSS+V + DV FG L LKL+ + + + F +
Sbjct: 220 QTPKLKYLKLNRQFIQRIVINDLSSIVMLNLDDVAYFGETLLSILKLISCVRDLTISFDI 279
Query: 295 *N-----------PLHFRIIPLS---------------LQKSPNLESL--NFFEFDPNIC 326
P ++ LS L+ NL+SL F +++ I
Sbjct: 280 LQDYRHFSKSKSLPKFHKLSVLSVKDMAVGSWESLLIFLESCQNLKSLVMGFRDYNWGIN 339
Query: 327 FIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEI-HLMRYLLENATVLER 375
F S+VP C L+ F+ + A++ L Y +EN+TVL++
Sbjct: 340 F-------SDVPQCVLSSLE--FVEVKAREVADMKKLWSYFMENSTVLKK 380
>AT5G44980.1 | Symbols: | F-box family protein |
chr5:18160600-18162058 FORWARD
Length = 435
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 22/269 (8%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQT 62
+D IS LPD +L IL L TKD ++TS LSKRW++LW+ V L+ T
Sbjct: 2 DRDYISELPDSLLTQILLELRTKDSVKTSVLSKRWRNLWLNVPGLEL---FTLQFTYPDR 58
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
E+ F++ +D + F+ C +L+ + ++ K + R+ + + + ++
Sbjct: 59 EEI---FVRFMDRFMEFK---CRSRLK---KFMITYVDCKGYRDRLMELIGTLVDHGLQH 109
Query: 123 LNLSLH--EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITF--EG 178
L + +H + + ++ SK+L LKL + + CLK L L+ I +G
Sbjct: 110 LYVFMHTFDRVDFKRQNIYKSKTLVSLKLHNVELKNSDFVVSLPCLKILKLENICHGEDG 169
Query: 179 EWSTQQLFLGCPVLEKLILYNC----GWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCV 234
++L GC VLE L L K + + ++ +L++ + + + D D
Sbjct: 170 PLVVEKLISGCSVLEDLELIRPFDIRTHKVLLLLRVSSQTLKSFTLHF--AIYKDRTDFS 227
Query: 235 VEISAVNLTSLNCTNYLIFELSLCNLSSL 263
VEI A L + + + NLSSL
Sbjct: 228 VEIDAPRLKYMTVEQSQSDSIVVKNLSSL 256
>AT3G10750.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT1G05080.1); Has
597 Blast hits to 573 proteins in 6 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 597;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:3366927-3368269 FORWARD
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 136/354 (38%), Gaps = 81/354 (22%)
Query: 33 LSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEVRYSFLKLVDSALLFREPYCIRKLR--L 90
LSKRW+ LW + L++ ++ E S L++ +L + + LR L
Sbjct: 3 LSKRWRFLWTMLPKLEYT----------ESNEGGKSIWDLLEKSLQLHKAPSVESLRIML 52
Query: 91 EPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLNLSLHEVIFILPDCLFASKSLCKLKLT 150
P+ P+ V WV A+ + +L LSL + L+ SK+L KL L
Sbjct: 53 GPQCPVD--------VDVGKWVSNAVDRYVRELTLSLSFLSDPASKRLYTSKTLVKLNLM 104
Query: 151 MYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISI 210
++ VP + C L++L L + ++ + S +L L CPVL L++ N+ R I
Sbjct: 105 GKILVDVPSAACLPSLQSLLLVNVVYKDQDSHVRLLLSCPVLRYLLVIRNKSDNVTRF-I 163
Query: 211 AIPSL------RTLIIDYDCSYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLV 264
SL R+L+ID + L L+ + L S+ N+ L
Sbjct: 164 DSQSLEKNGSGRSLVID-----------------SPGLNYLSIIDSLGGNFSIQNMPCLE 206
Query: 265 YAYVDVQLFGALHNLKLLYVL*NCLVDFRV*NPLHFRIIPLSLQKSPNLESLNFFEFDPN 324
A V L G N K L S + + P+
Sbjct: 207 KAI--VSLCGFYPNDKF-------------------------------LTSFSSVKILPS 233
Query: 325 ICFIGEGGIS----SNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLE 374
FI +S S+VP C L+ F G E L+ Y+LEN+ V E
Sbjct: 234 QPFIDHVPLSWNQPSSVPRCVLSHLEILEWKLFEGRREEKQLLAYILENSEVFE 287
>AT3G54910.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT4G10400.2); Has 661 Blast hits to 647
proteins in 8 species: Archae - 0; Bacteria - 2; Metazoa
- 2; Fungi - 0; Plants - 657; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr3:20342967-20344277 REVERSE
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 30/296 (10%)
Query: 108 VTMWVCAALKNKIEKLNL---SLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFS 164
+ MWV A+ + + +L + S E ILP L+ KSL L+L L VP
Sbjct: 52 IKMWVVIAVSHCLRELEVIYSSYPEKPNILPSNLYTCKSLVILELCGEIRLDVPRMAFLP 111
Query: 165 CLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDC 224
LKTL L + + E S +L CPVLE L++ ++ ++++ +PSL+ L +
Sbjct: 112 SLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLVDLLLSDSMEKLTVVVPSLQILSLFIPH 171
Query: 225 SYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ------LFGALHN 278
SY D + V+E ++ L N + N+ +L+ A +DV+ L G++ +
Sbjct: 172 SYEIDGI--VIETPSLKYFKLIDHNSKSHYCLVKNMPNLIEADIDVELHSIKSLIGSITS 229
Query: 279 LKLLYVL*NCLVDFR-V*NPL-HFR----------IIPLSLQKSPNLESLNFFEFD---- 322
+K L + + D V N L H + ++ L+ S NL++L+ E D
Sbjct: 230 VKRLSICSQAMYDGGFVFNQLKHLKLCRCKGHSSDLLVRLLKDSSNLQALDLSEMDYHEN 289
Query: 323 PNICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
+I + + S VP C L+T +S + G E L Y L+NA L+ T I
Sbjct: 290 HDILYWHQ---PSTVPECMLLSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTI 342
>AT3G54910.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT4G10400.2); Has 661 Blast hits to 647
proteins in 8 species: Archae - 0; Bacteria - 2; Metazoa
- 2; Fungi - 0; Plants - 657; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr3:20342967-20344277 REVERSE
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 30/296 (10%)
Query: 108 VTMWVCAALKNKIEKLNL---SLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFS 164
+ MWV A+ + + +L + S E ILP L+ KSL L+L L VP
Sbjct: 52 IKMWVVIAVSHCLRELEVIYSSYPEKPNILPSNLYTCKSLVILELCGEIRLDVPRMAFLP 111
Query: 165 CLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDC 224
LKTL L + + E S +L CPVLE L++ ++ ++++ +PSL+ L +
Sbjct: 112 SLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLVDLLLSDSMEKLTVVVPSLQILSLFIPH 171
Query: 225 SYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ------LFGALHN 278
SY D + V+E ++ L N + N+ +L+ A +DV+ L G++ +
Sbjct: 172 SYEIDGI--VIETPSLKYFKLIDHNSKSHYCLVKNMPNLIEADIDVELHSIKSLIGSITS 229
Query: 279 LKLLYVL*NCLVDFR-V*NPL-HFR----------IIPLSLQKSPNLESLNFFEFD---- 322
+K L + + D V N L H + ++ L+ S NL++L+ E D
Sbjct: 230 VKRLSICSQAMYDGGFVFNQLKHLKLCRCKGHSSDLLVRLLKDSSNLQALDLSEMDYHEN 289
Query: 323 PNICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
+I + + S VP C L+T +S + G E L Y L+NA L+ T I
Sbjct: 290 HDILYWHQ---PSTVPECMLLSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTI 342
>AT3G54910.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT4G10400.2); Has 661 Blast hits to 647
proteins in 8 species: Archae - 0; Bacteria - 2; Metazoa
- 2; Fungi - 0; Plants - 657; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr3:20342967-20344277 REVERSE
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 30/296 (10%)
Query: 108 VTMWVCAALKNKIEKLNL---SLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFS 164
+ MWV A+ + + +L + S E ILP L+ KSL L+L L VP
Sbjct: 52 IKMWVVIAVSHCLRELEVIYSSYPEKPNILPSNLYTCKSLVILELCGEIRLDVPRMAFLP 111
Query: 165 CLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDC 224
LKTL L + + E S +L CPVLE L++ ++ ++++ +PSL+ L +
Sbjct: 112 SLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLVDLLLSDSMEKLTVVVPSLQILSLFIPH 171
Query: 225 SYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ------LFGALHN 278
SY D + V+E ++ L N + N+ +L+ A +DV+ L G++ +
Sbjct: 172 SYEIDGI--VIETPSLKYFKLIDHNSKSHYCLVKNMPNLIEADIDVELHSIKSLIGSITS 229
Query: 279 LKLLYVL*NCLVDFR-V*NPL-HFR----------IIPLSLQKSPNLESLNFFEFD---- 322
+K L + + D V N L H + ++ L+ S NL++L+ E D
Sbjct: 230 VKRLSICSQAMYDGGFVFNQLKHLKLCRCKGHSSDLLVRLLKDSSNLQALDLSEMDYHEN 289
Query: 323 PNICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
+I + + S VP C L+T +S + G E L Y L+NA L+ T I
Sbjct: 290 HDILYWHQ---PSTVPECMLLSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTI 342
>AT3G59000.2 | Symbols: | F-box family protein |
chr3:21799757-21801536 FORWARD
Length = 345
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D + +LPD++L ILSFL TK+ TS LSKRW++L V +L F + L +
Sbjct: 2 DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPER 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSW-----------------M 105
E+R SF+ VD L + I+K L+ R+ + V W +
Sbjct: 62 DEIRQSFMDFVDRVLALQAESPIKKFSLKCRIGVDSDRVDGWISNVLNRGVSELDLLIIL 121
Query: 106 FRVTMWVCAALKNKIEKLNLSLHEVIFIL---PDCLFASKSLCKLKLTMYCVLRVPGSIC 162
RV + + L++ ++ + L V ++ + + S L++ C +P
Sbjct: 122 ERVRLPINDGLEDAMDNVVLRFGHVGKLMNGIRNVEYLELSADTLEVLSLCCESMP---V 178
Query: 163 FSCLKTLHLKYITFEGEWSTQQLFLGCPVLEKLIL 197
F LK+L +K G + L CP LE L++
Sbjct: 179 FKNLKSLAIKSTEGRGWQAMPVLLRNCPHLEFLLI 213
>AT5G38386.1 | Symbols: | F-box family protein |
chr5:15363178-15364815 FORWARD
Length = 403
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 170/420 (40%), Gaps = 104/420 (24%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFK--NKLGCNCTSKQT 62
D +SNLPD++L I+SFL TK+ S LSKRW++L V +LD + L ++
Sbjct: 2 DHLSNLPDELLCHIMSFLTTKEAALISVLSKRWRNLIAFVPNLDIFDCDILHWEVRKEER 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSV----KSWMFRVTMWVCAALKN 118
++R F+ VD R L L+ PL FS+ S+ RV W+ +
Sbjct: 62 DDIRQLFMDFVD-----------RVLALQGNSPLKKFSLCCGGGSYSDRVDCWIQNVMVR 110
Query: 119 KIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEG 178
+ +L+LS+ +F + + H+ FE
Sbjct: 111 GVSELDLSM----------IFDT--------------------------SYHMYPQVFEN 134
Query: 179 EWSTQQLFL-GCPVLEKLILYNCGWKNIR---RISIAIPSLRTLIID-YDCSYPDDFLDC 233
+ ++FL P LE+L++ + WK + +S++ SL+TL I C + F
Sbjct: 135 KKLNFEIFLRALPALEELVMNHIYWKELDVNVHVSVSSASLKTLTIKCIVCLHTKSF--- 191
Query: 234 VVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV--------QLFGALHNLKLLY-- 283
+L L+ ++Y + + + + +L A + + +L ++ N++ LY
Sbjct: 192 ----DTPSLAYLSYSDYAMGDYPVAKMENLFEARISLFVPEDDISRLMNSIRNVRYLYFS 247
Query: 284 -----VL*NCLVDFRV*NPLH-----------FRIIPLSLQKSPNLESL---NFFEFDPN 324
VL C V L ++ +P+ L+ P+LE+L +
Sbjct: 248 RDTLEVLSLCCESMPVFKNLKSLSIKSVESRGWQAMPVLLRNCPHLETLVLEALLHHVTD 307
Query: 325 ICFIGEGGISSNVPHCFKHR------LKTFFISNFSGNAAEIHLMRYLLENATVLERTRI 378
C G + V K R +K I F G E+H++++ L+ L+ +I
Sbjct: 308 KC----GDACACVSREEKGRSLKSCPVKVLEIKEFQGTMKEMHMIKHFLDYLPCLKEMKI 363
>AT5G56800.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT5G56560.1); Has 519 Blast hits to 504
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 4; Plants - 515; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr5:22972989-22974208 FORWARD
Length = 344
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 163 FSCLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDY 222
F LKTLHL + F + S Q+L CP LE L++ + N+R SI +PSLR+L IDY
Sbjct: 76 FESLKTLHLLSVRFSDDKSVQRLLSVCPKLEDLVVKRTTYVNVRIFSINVPSLRSLSIDY 135
Query: 223 D--CSYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV------QLFG 274
S P D V++ A +L +N ++ L N+ LV A V+V + G
Sbjct: 136 SWAVSRPADVHGFVID--APSLRFMNIKDHFSNLLQFENMPKLVKANVEVDCDLSEKFIG 193
Query: 275 ALHNLKLLYVL*NCLVDFRV*NPL--------HFRIIPLS----------LQKSPNLESL 316
++ +++ + + C + ++ P H + S L+ +P L+ L
Sbjct: 194 SITSIQHISL---CSKNSKIPYPSGTSFFYLEHLELCTCSQDWWNLLNRILEDAPRLQVL 250
Query: 317 NFFEFDPNIC---FIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVL 373
+ C + +VP C L+ F ++ G E + +Y+L A+ L
Sbjct: 251 KLKLGNCVQCSTELMDYWNEPCSVPKCLSSHLEIFEWRHYKGTKQERKVAKYILAKASCL 310
Query: 374 E 374
+
Sbjct: 311 K 311
>AT5G18770.1 | Symbols: | F-box family protein |
chr5:6261426-6263172 FORWARD
Length = 481
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 177/428 (41%), Gaps = 77/428 (17%)
Query: 2 RGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLW-------ITVSDLDFKNKLG 54
RG+D+IS LPD +L IL FL T + + TS LS RW++LW + SD + N +
Sbjct: 21 RGEDMISALPDHLLCHILIFLSTDESVLTSVLSSRWRNLWKWVPRLDLNTSDFPYPNDVT 80
Query: 55 CNCTSKQTVEVRYSFLKLVDSAL-LFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVC 113
C +D L L+ E Y +R+ +L R+ + F ++ + V
Sbjct: 81 CAA--------------FIDKFLNLYNESY-LREFKL--RIDQANFRSNVSLYEPCLGVV 123
Query: 114 AALKN----KIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTL 169
N ++E +L H + L A ++L LKL + L S+ CLK +
Sbjct: 124 IKKPNVRHFQVES-DLLEHWCTSEIRLTLSACQALVCLKLHLVW-LNDFESLSLPCLKIM 181
Query: 170 HLKYITFEGEWSTQQLFLGCPVLEKLIL-------------YNCGWKNI---RRISI-AI 212
+L+ + F + + + L PVLE L L Y+ K+ R + + AI
Sbjct: 182 YLEDVVFPSDAAAETLISCSPVLEDLKLSLHRDDVVVVLRVYSQSLKSFTLKRAVPVYAI 241
Query: 213 PSLRTLIIDYDCSYPDDFLDCVVEISAVNLTSLNCTNYLI------FELSLCNLSSLVYA 266
T+++D P +++ + ++ ++Y+ FEL LS
Sbjct: 242 NGAHTVLVDT----PRLVYMSLIDYQFKSFKIISMSDYVKVDLDVDFELMRDELSERNIV 297
Query: 267 YVDVQLFGALHNLKLLYVL*NCLVDFRV*NPL-HFR----------------IIPLSLQK 309
Y + F + N+ + + + F NPL FR ++ + L+
Sbjct: 298 YDLLNNFSGVRNMTISWTTLKFIHRFHDMNPLPKFRDLTRLRATMSSDASLEVLRIVLES 357
Query: 310 SPNLESLNF-FEFDPNICFIGEGGISSNVPHCFKHRLKTFFI-SNFSGNAAEIHLMRYLL 367
P L+ +F E + G S +P C L++ + S + A E+ L+RY L
Sbjct: 358 CPKLKHFHFTLELVNDFPEAVITGFSRVLPRCLVFSLESVEMESPITEKATELKLVRYFL 417
Query: 368 ENATVLER 375
EN+ L++
Sbjct: 418 ENSATLKK 425
>AT5G22700.1 | Symbols: | F-box family protein |
chr5:7545653-7547307 REVERSE
Length = 437
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 29/280 (10%)
Query: 1 GRGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSK 60
RG D IS+LPD++L ILS LPTK+ + TS LS RW+ +W++ LD + T
Sbjct: 3 NRG-DRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLSTPVLDIDIDAFDDAT-- 59
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKI 120
+F+ L F + C+ K +L M + W+ A+ +I
Sbjct: 60 -------TFVSFASRFLEFSKDSCLHKFKLSVERDDVD------MCTIMPWIQDAVNRRI 106
Query: 121 EKLNL----SLH-EVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYIT 175
+ L + S H E +++ L+ S++L L+L + R + LK +HL+
Sbjct: 107 QHLEVDCRFSFHFEAVYL---TLYLSETLVSLRLHFVTLHRYEF-VSLPNLKVMHLEENI 162
Query: 176 FEGEWSTQQLFLGCPVLEKL----ILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFL 231
+ + + CPVLE L I+ K +R S ++ SL+ ++ + + DD
Sbjct: 163 YYCLETLENFISSCPVLEDLTVVRIVDIITEKILRVRSRSLNSLKLVLDSSNGWFIDDID 222
Query: 232 DCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQ 271
+ V I A L L+ + + NL S A + V
Sbjct: 223 EWKVIIDAPRLAYLSLKDDQSASFVISNLGSSAKADIKVS 262
>AT5G25860.1 | Symbols: | F-box family protein |
chr5:9016908-9018424 REVERSE
Length = 448
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 49/254 (19%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWK--------------HLWITVSDLD 48
+D ++ LPD+IL ILS+LPTK + TS +SKRW+ HL++ SDL
Sbjct: 10 SRDAVNCLPDEILAKILSYLPTKRAVSTSLISKRWRNLFALMIQLFESQHHLYLDDSDLV 69
Query: 49 FKNKLGCNCTSKQTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRV 108
+ + + +V+ SF VD L + I+KL + PL + K +
Sbjct: 70 YPEE-----GKGEMKDVQESFGDFVDKTLT--DCNTIKKLSI--LCPLKCCAHKD----I 116
Query: 109 TMWVCAALKNKIEKLNLSLHEVIFI-----LPDCLFASKSLCKLKLTM--------YCVL 155
W+ A++ + L++ ++ F P +F K+L KL + YC
Sbjct: 117 DQWLHHAMERGVVDLDMRF-KMGFTPTQNEWPCNVFTIKTLVKLTFRIEVGQNKMPYC-- 173
Query: 156 RVPGSICFSCLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNC-GWK--NIRRISIAI 212
P + LK+L L I F E + GCP+LE+L L++ G++ + SI+
Sbjct: 174 --PKGV-LPVLKSLFLHAIWFACERLCHSMLPGCPILEELFLHDLRGYRYNDSPNFSISH 230
Query: 213 PSLRTLIIDYDCSY 226
+L+ L + ++ S+
Sbjct: 231 KTLKRLTVHFNNSF 244
>AT5G11370.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT5G56410.1); Has 303 Blast hits to 290
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 303; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr5:3627849-3629717 FORWARD
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 98/237 (41%), Gaps = 32/237 (13%)
Query: 147 LKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIR 206
LKL + VP +C LKTLHLK + + E S Q+L C +LE+L++ C N+R
Sbjct: 68 LKLKDEIFVDVPRMVCLPSLKTLHLKGVMYVDEGSLQRLLSNCSLLEELVVERCNGANMR 127
Query: 207 RISIAIP--SLRTLIIDYDCSYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLV 264
+ ++ IP SL LI++ D ++ + L S++ L L + N L
Sbjct: 128 KFAVIIPQSSLSYLIVNMPKLEEADIARGSHDVKKL-LKSISSVKRLSLYLEVNNNEDL- 185
Query: 265 YAYVDVQLFGALHNLKLLYVL*NCLVDFRV*NPLHFRIIPLSLQKSPNLESLNFFEFDPN 324
Y D +F L +LK FR+ R +P S+ F +
Sbjct: 186 --YGDDIVFNELEHLK-----------FRI-----SRAVPRSMANVVGDSMDTLFCWKQM 227
Query: 325 ICFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRIVCV 381
I +VP C L+TF + E L Y+L + L+ RI+ V
Sbjct: 228 I----------DVPQCLLSSLQTFKWRTYFPTEEEKGLATYILAKSCRLKTARILIV 274
>AT5G02920.1 | Symbols: | ubiquitin-protein ligase |
chr5:680541-681317 FORWARD
Length = 258
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 2 RGKDIISNLPDDILGCILSFLP-TKDVIRTSTLSKRWKHLWITVSDLDFK 50
R D ISNLPD+IL ILSF+P T VIRTS LSKRW+H+W L F+
Sbjct: 25 RSSDSISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWSKTPHLSFE 74
>AT1G49610.1 | Symbols: | F-box family protein |
chr1:18361679-18363192 REVERSE
Length = 354
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 91/218 (41%), Gaps = 58/218 (26%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKN--KLGCNCTSKQT 62
D IS+LPD IL LS +PTK IRTS LSKRW+H+W LDF + KL +
Sbjct: 26 DSISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVWSETPSLDFDDCYKLDVD------ 79
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
+D L Y RK+ +G ++ + W+ A+ +E
Sbjct: 80 ---------FIDKTLAL---YRARKIMTFDLWITNGINLP----YIDGWIKFAMSRNVEN 123
Query: 123 LNLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWST 182
L LS ++ +PD L+ + S+ +L S
Sbjct: 124 LFLSFDFRLYDVPDYLYINSSVKQL---------------------------------SI 150
Query: 183 QQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLII 220
++ GCP++E L L+ C + ++ + PSL+ L I
Sbjct: 151 AKILSGCPIIESLTLHFCDQLMVLDLTKS-PSLKILEI 187
>AT1G32020.1 | Symbols: | F-box family protein |
chr1:11512552-11513067 REVERSE
Length = 171
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKN-KLGCNCTSKQTV 63
D IS LPD ++ I+S+L KD I+TS LSKRW+ +W+ V LD KN N + Q V
Sbjct: 4 DRISTLPDHLVAKIVSYLGIKDSIKTSVLSKRWEFVWLKVVGLDLKNCDFPPNGIASQMV 63
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
+Y + F ++ ++ G +V + R W+ A+ ++ L
Sbjct: 64 VNKY---------MEFNSGLHMQYFKVN----FGGNTVCT--NRFLEWIATAVDRGVQHL 108
Query: 124 NLSLHEVIFI---LPDCLFASKSLCKLKLTMYCVLRV 157
+ + I +P ++ SK+L LKL + L+
Sbjct: 109 DAENKNPVIIKEFMPKKIYKSKTLVSLKLAIKIFLKA 145
>AT3G29830.1 | Symbols: | F-box family protein |
chr3:11737049-11738847 FORWARD
Length = 464
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 181/453 (39%), Gaps = 85/453 (18%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTV 63
+D IS+LPD +L ILSFL KD ++TS LSKRW+++ ++ FK + + V
Sbjct: 7 RDRISSLPDVVLVMILSFLSFKDNVKTSILSKRWRNICYEAKNISFKESEYVDISVFDYV 66
Query: 64 EVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
R SF++ + + + I + P+ GF V+ + + ++ +++KL
Sbjct: 67 SKRVSFVRYMLNWVSRVPIKVIESFEICLGFPV-GFEVE-----IKSLIEFSISRQVKKL 120
Query: 124 NLSL--------------HEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTL 169
L + + LP ++ ++L LT+Y + P L+TL
Sbjct: 121 VLDFSSPFWDNTWDGLRNDDFVIELPALIYGLQTLE--SLTIYACMFDPSRFTNVGLRTL 178
Query: 170 HLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDD 229
+ + E + L P+LE L + +C ++ +R LIID +C P
Sbjct: 179 SIGWFRLE---KIESLLSKFPLLESLSIISCYLDEVKLAGQI--RVRELIID-NCIIPTM 232
Query: 230 FLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV------------------Q 271
+ C++ + + + + N ++F+ N+ L Y+D
Sbjct: 233 Y--CLLNLPNIEIFKYS-GNVIVFDFQKVNMILLKEVYLDFFIEHENDEPTYSPKEAGDI 289
Query: 272 LFGALHNLK----------LLYVL*NC--------------LVDFRV*NPLHFRIIPLSL 307
L L++L+ LL V+ C LV + +P F + L L
Sbjct: 290 LSHLLNDLRSSRTLTVCSYLLEVISECNDPVDMLRDVQAQHLVLETLMHPNEFTGMRLLL 349
Query: 308 QKSPNLESLNF--FEFDPNICFIGEGGISSNV-------PHCFKHRLKTFFISNFSGNAA 358
PNLE+L F P GG SS+ C + LK + F +
Sbjct: 350 DHCPNLETLTFQLLCLKP-FPMASHGGSSSHTLWLENISSRCLRRTLKILVVRGFCNSWN 408
Query: 359 EIHLMRYLL--ENATVLERTRIVCVQMYQKTRR 389
E +L+ YL+ E+ LER + + + R+
Sbjct: 409 EFYLLNYLVLPEHGFALERVELYLPPLQEMPRQ 441
>AT1G60410.1 | Symbols: | F-box family protein |
chr1:22259129-22260526 FORWARD
Length = 406
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 111/242 (45%), Gaps = 29/242 (11%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLW--ITVSDLDFKNKLGCNCTSK 60
GKD +S+LP +L ILS L TK+ +RTS LS RW +LW ++V DLDF++ G
Sbjct: 8 GKDRLSDLPCHLLCRILSNLSTKESVRTSVLSPRWSNLWSLVSVLDLDFQDFKG------ 61
Query: 61 QTVEVRYSFLKLVDSALLFREPYCIR----KLRLEPRMPLSGFSVKSWMFRVTMWVCAAL 116
+ + +DS + + E ++ + + L V+ V VC
Sbjct: 62 -----EHDMGEFIDSFMEYHEELGLKLKSFNMFYDANEHLHEPFVRRLNKVVRRGVCDLN 116
Query: 117 KNKIEKLNLSLHEVIFILPDCLFASKSLCKLKLTMYCVL---RVPGSICFSCLKTLHLKY 173
+ ++++L +P L++ +L + L +YCV+ S+ +K ++ +
Sbjct: 117 IQNMVDVDVAL----VRMPPSLYSCATL--VNLILYCVVFDHPRSKSVSLPSVKKMYFEG 170
Query: 174 ITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIID---YDCSYPDDF 230
+ F+G+ + L PVLE+L + + I + SL + ++ ++C P
Sbjct: 171 VKFDGDSVLETLISHSPVLEELTVIPHPEDYLEVICVRSQSLESFRLESKRFECDNPKVE 230
Query: 231 LD 232
+D
Sbjct: 231 ID 232
>AT3G59180.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT3G59210.1); Has 614 Blast hits to 600
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 614; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr3:21880719-21882459 FORWARD
Length = 475
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 86 RKLRLEPRMPLSGFSVKSWM----FRVTMWVCAALKNKIEKLNLSLH-EVIFILPDCLFA 140
R + L+ PL+ FS+K + V W+ L + L+L++ E + LP +F
Sbjct: 44 RLMALQGNAPLNRFSLKCKVRCDSACVDGWIINVLDRGVLDLDLNISSESDYKLPSEVFL 103
Query: 141 SKSLCKLKLTMYCVLRVPGSICF-SCLKTLHLK-YITFEGEW-STQQLFLGCPVLEKLIL 197
+K+L +LKL + F LKTL+L ++ FE + +L GCPVLE+L++
Sbjct: 104 NKTLVRLKLGGKDEFIIDVEEVFLPKLKTLYLHGFVCFEDSGVACAKLISGCPVLEELVM 163
Query: 198 YNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVNLTSLNCTNYLIFELSL 257
N W + S++ P+L+ + I CS D+ V NL L T+ + +
Sbjct: 164 INLMWGLMDVCSVSNPTLKRVTI---CSEIIDYNPQSVSFDTPNLVYLEFTDVVAIKYPK 220
Query: 258 CNLSSLVYAYVDVQL 272
NL SLV A + ++L
Sbjct: 221 VNLDSLVDARLGLRL 235
>AT5G02910.1 | Symbols: | F-box family protein |
chr5:677120-678907 FORWARD
Length = 458
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 3 GKDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLW 41
G D IS+LPD+IL ILS +PTK IRTS LSKRW+++W
Sbjct: 9 GMDFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVW 47
>AT5G38565.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: FBD (InterPro:IPR013596),
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT5G38570.1); Has
991 Blast hits to 931 proteins in 8 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 991;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr5:15444571-15446009 REVERSE
Length = 349
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK----LGCNCTSK 60
DI + LPDD+L ILSF+PTK + TS LSKRW+ LW+ + LDF + L T +
Sbjct: 2 DIFNGLPDDVLVKILSFVPTKVAVSTSILSKRWEFLWMWLPRLDFGSPKTDLLAFLNTCQ 61
Query: 61 QTVEVRYSFLKLVDSAL-LFREPY 83
E + +D L L R P+
Sbjct: 62 YDKEEEVGLVDFIDKKLPLHRAPF 85
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 170 HLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYD-CSYPD 228
HL+ EG+ S Q + CPVL+ L + ++++ +I +PSL++L + + C D
Sbjct: 108 HLETRQREGK-SLQDILSICPVLDDLSVICSVHQDVKEFTIIVPSLQSLTLFIENCEVFD 166
Query: 229 DFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDVQL------FGALHNLKLL 282
++ + + L ++ + L + L AYVDVQL G++ ++K L
Sbjct: 167 GYV-IDTPLKYLKLEDVHEEEHYCL---LKKMPKLREAYVDVQLDDLKSLIGSITSVKRL 222
Query: 283 YVL*NCLVDFRV*NPLHFRIIPLSLQKSPNLESLNFFEFDPNICFIGEGGISS-----NV 337
+ FR +I+ L+ SPNL LN F+ ++ G+ +V
Sbjct: 223 NHM------FRE----KSKILGQLLKDSPNLRVLNIFKVQGHVTL--STGVDCWNQPISV 270
Query: 338 PHCFKHRLKTFFISNFSGNAAEIHLMRYLLENATVLERTRIVC 380
P C L+ F +S++ G ++ + Y+L+NA L+ I+
Sbjct: 271 PECLLESLQIFNLSHYFGKQQDLDFVVYILKNACHLKTATILA 313
>AT1G56610.1 | Symbols: | syntaxin-related family protein |
chr1:21212189-21213960 FORWARD
Length = 535
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 28/279 (10%)
Query: 2 RGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKR--WKHLWITVSDLDFKNKLGCNCTS 59
+ K + +LP + ILS+LPTK + S L + W+ +S L F + +
Sbjct: 70 KKKTELCDLPKCLAPHILSWLPTKTAVTVSLLFMKGWWRSEMKNLSSLKF------SFSD 123
Query: 60 KQTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNK 119
Q E F++ VD L R + L + G V T V L N
Sbjct: 124 DQEEE---HFVRFVDQVLRQRGNRKLDSFSLTLNDEIDGGFV-------THLVDYPLDNG 173
Query: 120 IEKLNLSLHEVI--FILPDCLFASKSLCKLKL-TMYCVLRVPG----SICFSCLKTLHLK 172
+EKL LS++++ F L +F+ +L LKL T ++ + G + CLKTL L
Sbjct: 174 VEKLKLSIYDIKGNFQLSSRVFSQATLVTLKLATNRSLIWINGDDVAAAHLPCLKTLWLD 233
Query: 173 YITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTL-IIDYDCSYPDDFL 231
+ +L CP+LE+L++ + W N + SLR L I+ D D++
Sbjct: 234 DVLVADVKVFVRLLSRCPILEELVMIDMKWHNWEACFVVSASLRRLKIVWTDYVEMDEYD 293
Query: 232 DC--VVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYV 268
C V N+ L T+++ + L SSL+ A +
Sbjct: 294 RCPQSVLFDTPNVLYLEYTDHIAGQYPLLKFSSLIEAKI 332
>AT5G40050.1 | Symbols: | F-box family protein |
chr5:16032083-16033551 REVERSE
Length = 415
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 108/243 (44%), Gaps = 34/243 (13%)
Query: 10 LPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDL---DFKNKLGCNCTSKQTVEVR 66
LPD++L ILSFLPTK TS LSKRW+ L+ ++ L + + +QT E
Sbjct: 19 LPDELLSHILSFLPTKRAASTSILSKRWRTLFPLMNHLCASLYLDDTDLLYPERQTEEEY 78
Query: 67 Y----SFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK 122
Y SF VD L ++K L V+ M T + AL+ +
Sbjct: 79 YVIHNSFRNFVDKTLSGCNNNSLKKFSL----TYEDDDVQR-MCLTTGMMSKALEQGVSD 133
Query: 123 LNLS-----LHEVIFILPDCLFASKSLCKLKL-TMYCVLRVPGSICFSCLKTLHLKYITF 176
L L ++E +LPD +F + +L KL L T C+ R P + L+ L++ +I
Sbjct: 134 LELYIYMPLMYEPPRLLPDTVFINNTLVKLTLGTELCLGRSP----WENLEELYIHHIYI 189
Query: 177 EGEWS-----TQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDYDCSYPDDFL 231
E T ++ + + + YN + R +SI P+L + +DY D+L
Sbjct: 190 EDRDEEFNIHTAPHYIAHNIKKLTVCYNNDVQAPRILSIYTPNL--VYLDY-----SDYL 242
Query: 232 DCV 234
C+
Sbjct: 243 TCL 245
>AT1G56610.2 | Symbols: | syntaxin-related family protein |
chr1:21212378-21213960 FORWARD
Length = 472
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 28/279 (10%)
Query: 2 RGKDIISNLPDDILGCILSFLPTKDVIRTSTLSKR--WKHLWITVSDLDFKNKLGCNCTS 59
+ K + +LP + ILS+LPTK + S L + W+ +S L F + +
Sbjct: 7 KKKTELCDLPKCLAPHILSWLPTKTAVTVSLLFMKGWWRSEMKNLSSLKF------SFSD 60
Query: 60 KQTVEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNK 119
Q E F++ VD L R + L + G V T V L N
Sbjct: 61 DQEEE---HFVRFVDQVLRQRGNRKLDSFSLTLNDEIDGGFV-------THLVDYPLDNG 110
Query: 120 IEKLNLSLHEVI--FILPDCLFASKSLCKLKL-TMYCVLRVPG----SICFSCLKTLHLK 172
+EKL LS++++ F L +F+ +L LKL T ++ + G + CLKTL L
Sbjct: 111 VEKLKLSIYDIKGNFQLSSRVFSQATLVTLKLATNRSLIWINGDDVAAAHLPCLKTLWLD 170
Query: 173 YITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTL-IIDYDCSYPDDFL 231
+ +L CP+LE+L++ + W N + SLR L I+ D D++
Sbjct: 171 DVLVADVKVFVRLLSRCPILEELVMIDMKWHNWEACFVVSASLRRLKIVWTDYVEMDEYD 230
Query: 232 DCVVEI--SAVNLTSLNCTNYLIFELSLCNLSSLVYAYV 268
C + N+ L T+++ + L SSL+ A +
Sbjct: 231 RCPQSVLFDTPNVLYLEYTDHIAGQYPLLKFSSLIEAKI 269
>AT1G80960.1 | Symbols: | F-box protein-related |
chr1:30416065-30418220 FORWARD
Length = 486
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF---KNKLGCNCT 58
D IS LPDD+L ILS L T++ IRTS +SKRW+H+W +S L F KN + N T
Sbjct: 50 DWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMRKNIINSNNT 106
>AT1G80960.2 | Symbols: | F-box protein-related |
chr1:30416065-30418220 FORWARD
Length = 486
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF---KNKLGCNCT 58
D IS LPDD+L ILS L T++ IRTS +SKRW+H+W +S L F KN + N T
Sbjct: 50 DWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMRKNIINSNNT 106
>AT1G80960.3 | Symbols: | F-box protein-related |
chr1:30416065-30418220 FORWARD
Length = 462
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF---KNKLGCNCT 58
D IS LPDD+L ILS L T++ IRTS +SKRW+H+W +S L F KN + N T
Sbjct: 50 DWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMRKNIINSNNT 106
>AT5G54820.1 | Symbols: | F-box family protein |
chr5:22269859-22271777 FORWARD
Length = 472
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 178/444 (40%), Gaps = 84/444 (18%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCN---CTSK 60
+D +S+LPD +L I+SFLP K+ +RTS LSKRW++L + ++L FK N ++
Sbjct: 6 QDRLSSLPDILLIMIISFLPLKECVRTSVLSKRWRYLCLETTNLSFKESDYVNPDITDAE 65
Query: 61 QTVEVRY-SFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNK 119
+ V Y SF VD + + + + L GF K + V +KN
Sbjct: 66 YSRIVAYRSFFCSVDKWVSITQHQVVESFEI-CFSHLVGFEDKIDAL-IEYAVSTRVKNL 123
Query: 120 IEKL---------NLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLH 170
+ L ++S ++ LP +++ +L LK+ C + L++L
Sbjct: 124 VVDLSNPSWRSNGDISYRHFMYTLPKSVYSLTTLESLKI-YGCKFDPSKFVNPVLLRSLS 182
Query: 171 LKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDY-DCSYPDD 229
+ ++ E + L P L+ L + NC +I ++ R L+I++ D SY
Sbjct: 183 IGWVRLE---NLHSLLSKSPSLQSLSIKNCWGVDITSMA---GQFRELVIEHSDFSY--- 233
Query: 230 FLDCVVEI-----------------SAVNLTSLNCTNYLIFE----LSLCNLSSLVYAYV 268
+ C E+ VN+ N YL F L + SS + V
Sbjct: 234 -MQCAFELPRIHSFKYSGELFEFYFDVVNVIIPNV--YLDFGEERVYDLQSQSSRISGEV 290
Query: 269 DVQLFGALHNLK-------LLYVL*NCLVDFRV*NPL--------------HFRIIPLSL 307
++ L + +L V+ C + P+ F I L L
Sbjct: 291 ISRIINDLRAAETLTVCPYILQVIPECEKPSDLLQPMETRHLVLRTKMHTKEFNGIILLL 350
Query: 308 QKSPNLESLNFFEFDP---NICFIGEG------GISSNVPHCFKHRLKTFFISNFSGNAA 358
PNLE+L F P + EG + + LK I NF G++
Sbjct: 351 NNCPNLETLGFDILTPCPFSATSSDEGIDPKTYWMQKRTCKSLRKTLKVVVIRNFCGSSN 410
Query: 359 EIHLMRYLLENAT----VLERTRI 378
E++++RYL+ +A+ LER +
Sbjct: 411 ELNVLRYLIRSASGAGDALERVEL 434
>AT5G15620.1 | Symbols: | F-box family protein |
chr5:5082465-5083991 FORWARD
Length = 440
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 186/447 (41%), Gaps = 98/447 (21%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D SNLPDD++ I+SFL K+ +SK +++L T K+ V
Sbjct: 2 DRFSNLPDDVIYHIVSFLSAKEATCLKFVSKNFQNL----------------VTIKRNVV 45
Query: 65 VRY--SFLKLVDSALLFREPYCIRKLRLE-PRMPLSGFSVKSWMFRVTMWVCAALKNKIE 121
+ SF VD L Y I++ L+ M + +++ V +C LK +
Sbjct: 46 FHHWESFKNFVDGLLAEPASYRIKRFSLKLVSMDFAQYNI------VNDCLCNVLKRGVL 99
Query: 122 KLNLSLH-EVIFILPDCLFASKSLCKLKLTMYCVLRV-PGSICFSCLKTLHLKYITFEGE 179
L L ++ + +ILP +F K++ +LKL V+ + P + LKTL L + F
Sbjct: 100 DLELDINVKEDYILPSDVFTCKTVVRLKLGCGFVIDILPKNALLPALKTLILDSVRFYAS 159
Query: 180 --WSTQQLFLGCPVLEKLILYNCGWKNIRRIS-IAIPSLRTLIIDYDCSYPD-----DFL 231
+ +L PVLE+L++ W++ + ++ P+L+ L + P+ DF
Sbjct: 160 DGCAFTRLLSASPVLEELVIDRLNWEHWKGSRFVSSPTLKRLTLRRKEWEPEPETWTDFE 219
Query: 232 DCVVEISAVNLTSLNCTNYLIFELSLCNLSSLVYAYVDV-----------------QLFG 274
V +L L + + + + NL+S+V A + + L
Sbjct: 220 S--VSFDTPSLAYLKYKDVIPYGYPIVNLNSIVEARLTLPREVEYDYWLNRSADPSNLIR 277
Query: 275 ALHN-----LKLLYVL*NCLVDFRV*NPLHFRIIPLS---------------LQKSPNLE 314
L N +K+L+ + +F+ P+ +I LS L+KSPNL+
Sbjct: 278 GLKNVEILSIKVLHTMDLLFYNFKEAVPVFENLIHLSVTSEADFCWDPLQILLEKSPNLK 337
Query: 315 SL--------NFFE-FDPNI---CFIGEGGISSNVPHCFKHRLKTFFISNFSGNAAEIHL 362
+L NF+E D C +G + S C +K I+ F G+ EI
Sbjct: 338 TLTIEGPLHYNFYEKLDLEAVCECLLGYSFLLS----C---PIKVLKITEFVGDIGEIVQ 390
Query: 363 MRYLLENATVLERTRIVCVQMYQKTRR 389
M+++L LE ++++ + RR
Sbjct: 391 MKHVLGKLPCLE-----LLEVHVQARR 412
>AT1G61330.1 | Symbols: | F-box family protein |
chr1:22622975-22624527 FORWARD
Length = 447
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 20/199 (10%)
Query: 6 IISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEV 65
+I L D+++ CILSFLP + ++ LSKR++ W DLDF + + V +
Sbjct: 11 LIKRLSDELVECILSFLPVQSTLQHRVLSKRYRDTWKLSRDLDFSGIFSVRRSQSEAVRI 70
Query: 66 RYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEK--L 123
+ D + + P R + + L V+ ++ WV L+ I++ L
Sbjct: 71 ------IEDVFIQHQGPEIDRFV-----LSLDHTGVED---KILSWVDTCLRKNIKELVL 116
Query: 124 NLSLHEVIFILPDCLFASKSLCKLKLTMYCVLRVPGSI--CFSCLKTLHLKYITFEGEWS 181
+ S + + +P +S++L LKL +C +P ++ LKTL L E
Sbjct: 117 DFSSSKKVMEIPLNFSSSETLTVLKL-QWCRFEIPNNLPKGLRLLKTLSLMRTEVTNEM- 174
Query: 182 TQQLFLGCPVLEKLILYNC 200
+F C LE L L C
Sbjct: 175 IDSIFNNCIHLESLELVKC 193
>AT3G58950.1 | Symbols: | F-box family protein |
chr3:21784116-21785840 REVERSE
Length = 417
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D+ S+LPD++L ILSFL TK+ S +SKRW++ + V +LD + ++ E
Sbjct: 2 DLFSSLPDEVLCHILSFLTTKEAALASVVSKRWRNQFALVPNLDIDEE-----GKREREE 56
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSW 104
+ SF+ VD+ L + I+K L+ + + + +W
Sbjct: 57 ILLSFMDFVDNVLALQADSPIKKFSLKCKTGVHPRRLDAW 96
>AT3G52690.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT3G52680.2); Has 462 Blast hits to 454
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 462; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr3:19530736-19531811 FORWARD
Length = 299
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 25/271 (9%)
Query: 143 SLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYN-CG 201
+L L L ++ VP +C L+TLHL + F+ S L GCP LE L +Y
Sbjct: 4 TLETLILKYLALVDVPSPVCMKSLRTLHLDCVNFKHNESFSNLISGCPNLEDLFMYQYYP 63
Query: 202 WKNIRRISIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVNLTSLNCTNYLIFE----LSL 257
+ I PSL+ L+I D ++ + + + L+ + + E L
Sbjct: 64 LDVVMNFIIVAPSLKRLVI-IDYREAGGYVINAPTLKYLKIKGLSHCGFCLIENAPVLVE 122
Query: 258 CNLSSLVYAYVDVQLFGALHNLKLLYV---L*NCLVDFRV*NPLHFRI----------IP 304
+ +L Y Y + ++ G+L + K L + C +D +H I +
Sbjct: 123 AKIRNLFYIYKE-KILGSLKSAKRLSLDLSPLECPIDSIFYQLVHLEIYTCKEEWWNLLK 181
Query: 305 LSLQKSPNLESLNF----FEFDPNICFIGEGGISSNVPHCFKHRLKTFFISNFSGNA-AE 359
L L SP L+ L +F G+ NVP C +LK F +++ + E
Sbjct: 182 LMLDSSPKLQVLKLIGKNLDFKKVGMVGGKWNEPKNVPECLLSQLKMFVWTSYHWESEVE 241
Query: 360 IHLMRYLLENATVLERTRIVCVQMYQKTRRK 390
+ Y+L+NA L+ ++ K K
Sbjct: 242 KEVATYILKNARQLKNVSFSTRPIHSKEHNK 272
>AT1G47915.1 | Symbols: | F-box family protein |
chr1:17660752-17660973 FORWARD
Length = 73
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%)
Query: 4 KDIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF 49
+D ISNLPD+ILG ILS LPTK TS LSKRW++L V +L F
Sbjct: 7 RDSISNLPDEILGKILSLLPTKVAASTSVLSKRWRNLLGLVDNLCF 52
>AT3G26930.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: sperm cell;
CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),
FBD-like (InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G13965.1); Has 678
Blast hits to 661 proteins in 16 species: Archae - 0;
Bacteria - 2; Metazoa - 21; Fungi - 0; Plants - 651;
Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
| chr3:9925931-9927351 FORWARD
Length = 409
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 31 STLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEVRYSFLKLVDSALLFREPYCIRKLRL 90
S LSKRW+ LW + L F + + F V+ LL + ++ L L
Sbjct: 2 SVLSKRWRSLWKMLPRLKFDD---------------WMFPDNVNRCLLSHQASFLQSLHL 46
Query: 91 EPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLNLSLH--EVIFILPDCLFASKSLCKLK 148
+ + S M + + A I +L L ++ + F P L +SL L
Sbjct: 47 -----VIDYDFVSHM-HTGILMGIAFGRHIRELVLYVNGFQESFTFPLSLCNCESLETLT 100
Query: 149 LTMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGWKNIRRI 208
L ++ VP + L+TLHL + + + S L GC LE L+++ ++
Sbjct: 101 LGHNVLIDVPSPVFLKSLRTLHLDGVEYTDDESVVNLLSGCISLENLVVHRVIQADVTTF 160
Query: 209 SIAIPSLRTLIIDYDCSYPDDFLDCVVEISAVNLTSL 245
+IA+PSL+ L + + DD D V I+A +L L
Sbjct: 161 TIAVPSLKRLTLTTEF---DDDEDSVYVINAPSLKYL 194
>AT1G10780.1 | Symbols: | F-box family protein |
chr1:3592875-3594310 REVERSE
Length = 418
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 7 ISNLPDDILGCILSFLPT-KDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVEV 65
+ +LPD IL ILS+L + +DV + +SKRWK +V + F + + E
Sbjct: 1 MDSLPDAILQYILSYLTSARDVAACNCVSKRWKESTDSVKSVVFH---------RNSFE- 50
Query: 66 RYSFLKLVDSALLFREPYCIRKLRLEPRM---PLSGFSVKSWMFRVTMWVCAALK-NKIE 121
S ++ DS + R+ + RLE + P + + SWM M V ++L+ ++
Sbjct: 51 --SIMETDDSDSIVRKMISSSR-RLEELVVYSPFTSSGLASWM----MHVSSSLRLLELR 103
Query: 122 KLNLSLHEVIFILP---DCLFASKSLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEG 178
NL+ EV+ P DC+ +K+L LKL ++ P F L++L + +
Sbjct: 104 MDNLASEEVVVEGPLKLDCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDD 163
Query: 179 EWSTQQLFLGCPVLEKLILYNCGWKNIRRISIAIPSLRTLIIDY 222
S CP L L+L C + ++ ISI +P L +D+
Sbjct: 164 S-SLSHALRACPNLSNLLLLAC--EGVKSISIDLPYLEHCKLDF 204
>AT3G58820.1 | Symbols: | F-box family protein |
chr3:21752960-21754615 FORWARD
Length = 413
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNK--LGCNCTSKQT 62
D +S+LP+++L ILSFL TK+ TS LSKRW++L V +L + L +
Sbjct: 2 DGVSSLPNELLCHILSFLTTKEAALTSILSKRWRNLIAFVPNLYIDDTVFLHPEEGKRDR 61
Query: 63 VEVRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRV 108
E+ SF+ VD L + Y I+K L+ + V +W+ V
Sbjct: 62 PEIIQSFMDFVDRILALQGNYPIKKCSLKCLTEVDSVRVDAWISNV 107
>AT2G39415.1 | Symbols: | F-box family protein |
chr2:16458607-16458966 REVERSE
Length = 119
Score = 51.6 bits (122), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLW 41
D IS+LPD IL ILS LPT IRTS LS RW+H+W
Sbjct: 38 DSISSLPDVILQQILSSLPTNLAIRTSVLSTRWRHVW 74
>AT3G60790.1 | Symbols: | F-box protein-related |
chr3:22464623-22466948 FORWARD
Length = 488
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 1 GRGK------DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDL--DFKNK 52
G+GK D IS LPD++L ILS L TKD + TSTLSKRW W + L D +N
Sbjct: 40 GKGKGIKYPVDRISMLPDEMLQKILSTLSTKDAVITSTLSKRWVDQWKRIPHLCVDMRNI 99
Query: 53 LGCNCTS 59
+ N TS
Sbjct: 100 MRTNPTS 106
>AT3G62430.1 | Symbols: | F-box family protein |
chr3:23093795-23095304 REVERSE
Length = 437
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 167/422 (39%), Gaps = 94/422 (22%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D ISNLPD ++ ++S L TK+ SK W +L + F
Sbjct: 2 DRISNLPDGVIYRVISLLSTKEATCLKYTSKNWLNLVTIIPIAVF--------VDSSASA 53
Query: 65 VRYSFLKLVDSALLFR-EPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKL 123
+ SF D +L R + IR+ L+ ++S F V L+N +E
Sbjct: 54 ISASFKDFADRIMLARLASHRIRRFSLK---------LQSLNFAQYKTVNDCLRNVLECG 104
Query: 124 NLSLHEVI-----FILPDCLFASKSLCKLKLTMYCVLRV-PGSICFSCLKTLHLKYITFE 177
L L I + LP +F KS+ K+KL V+ + P + LKTL L + FE
Sbjct: 105 VLDLELDINVRGDYSLPSEIFTCKSVVKMKLGSGFVIDILPKNAWLPALKTLLLDTVRFE 164
Query: 178 ----GEWSTQQLFLGCPVLEKLIL--YNC-GWKNIRR----------------------- 207
S +L CPVLE+L++ +NC WK RR
Sbjct: 165 FDNTAGCSFTKLISACPVLEELVIDGHNCEDWKWSRRVSSQILKRLTIRRKEWVHDGSSF 224
Query: 208 --ISIAIPSLRTLIIDYDC---SYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLSS 262
IS+ IPSL +D SYP L+ +VE + + L SL + N+ +
Sbjct: 225 EPISLDIPSLEYFKY-FDTLRDSYPVVKLNSLVE-AKLELPSLYIGDTY-------NVRN 275
Query: 263 LVYAYVDVQLF--GALHNLKLLYVL*NCLVDFRV*NPLHFRI----------IPLSLQKS 310
L+ +VQ+ GA+ + L +V + F N H + + + L+KS
Sbjct: 276 LIKGLKNVQILRLGAVDTMHLFWVFREAVPVFE--NLFHLSVSTHDAICWDDLRILLEKS 333
Query: 311 PNLESLNFFEFDPNICFIGEGGISSNVPHCFKHR-------LKTFFISNFSGNAAEIHLM 363
PNL++L + + G G +S V C ++ I+ F G E+ +
Sbjct: 334 PNLKTLTI----EALHYHGYGDENS-VCECLDGYSFLLSCPIEILKITEFGGEIEEMEQV 388
Query: 364 RY 365
Y
Sbjct: 389 EY 390
>AT4G03220.1 | Symbols: | F-box family protein |
chr4:1417472-1419148 FORWARD
Length = 498
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDFKNKLGCNCTSKQTVE 64
D ISNLPD + IL LP K + S LSKRW+ L++++ DLDF + +
Sbjct: 24 DRISNLPDSLNHQILLLLPLKSAAQASLLSKRWRSLFLSLPDLDFTSINDLKNPKSFSSN 83
Query: 65 VRYSFLKLVDSALLFREPYCIRKLRLEPRMPLSGFSVKSWMFRVTMWVCAALKNKIEKLN 124
Y L L R+ +R LR R+P++ S+ S + R+ A+ ++++ L+
Sbjct: 84 SIYKVLSLRS----HRDSNNLRSLRF--RVPVTFTSLNS-LIRL------AVTHQVQDLD 130
Query: 125 LSL-HEVIFILPDCLFASKSLCKLKL-TMYCVLRVPGSIC----FSCLKTLHLKYITFEG 178
+ + + F P + S++L L L + R+P S F L +L L +
Sbjct: 131 IEVTTKDYFNFPRWIVTSQNLRALTLKSANLGFRLPPSSSARGGFQKLTSLSLSRVILHN 190
Query: 179 EWSTQQLFL--GCPVLEKLILYNC-GWKNIR 206
+ F P+LEKL L C G K ++
Sbjct: 191 QPCLSDFFTDPSFPLLEKLTLECCFGLKELK 221
>AT1G67390.1 | Symbols: | F-box family protein |
chr1:25244690-25247139 FORWARD
Length = 479
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 5 DIISNLPDDILGCILSFLPTKDVIRTSTLSKRWKHLWITVSDLDF 49
D IS LPDD+L IL+ L T+D ++TS LS RWK++W V L F
Sbjct: 41 DRISKLPDDVLVMILASLSTEDALKTSVLSTRWKNVWKQVPYLHF 85
>AT5G56430.1 | Symbols: | F-box family protein |
chr5:22853323-22854575 REVERSE
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 143 SLCKLKLTMYCVLRVPGSICFSCLKTLHLKYITFEGEWSTQQLFLGCPVLEKLILYNCGW 202
+L L+ + V + CF +K L L + F + + ++L P+LE L+++ G
Sbjct: 63 TLVALRFMKLTIEDVHSTTCFRSVKNLSLLDVKFSSDKTVERLLSCFPILETLVVHRWGA 122
Query: 203 KNIRRISIAIPSLRTLIIDYDC-SYPDDFLDCVVEISAVNLTSLNCTNYLIFELSLCNLS 261
N++ +I +PSL++L I Y Y + D I+A +L L+ ++ SL N+
Sbjct: 123 DNVKTFAICVPSLQSLNIRYTVGGYHNPKTDHGFVINAPSLKHLDIVDHFSGFCSLVNMP 182
Query: 262 SLVYAYVDVQ 271
+ A + ++
Sbjct: 183 EQLDAEIHLR 192