Jatropha Genome Database
- JcCA0287661.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0287661.20 + phase: 0
(367 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G12560.2 | Symbols: | F-box family protein | chr4:7441815-74... 131 8e-31
AT4G12560.1 | Symbols: | F-box family protein | chr4:7441815-74... 131 8e-31
AT3G06240.1 | Symbols: | F-box family protein | chr3:1887336-18... 119 3e-27
AT4G22390.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 118 5e-27
AT3G23880.1 | Symbols: | F-box family protein | chr3:8622061-86... 77 2e-14
AT3G22650.1 | Symbols: ATSFL61, SFL61, CEG | CEG (CEGENDUO) | ch... 72 4e-13
AT4G04690.1 | Symbols: | F-box family protein (FBX15) | chr4:23... 72 5e-13
AT3G10430.1 | Symbols: | F-box family protein | chr3:3242750-32... 72 7e-13
AT3G17540.1 | Symbols: | F-box family protein | chr3:6002783-60... 72 8e-13
AT3G20710.1 | Symbols: | F-box protein-related | chr3:7237911-7... 71 1e-12
AT4G38870.1 | Symbols: | F-box family protein | chr4:18132583-1... 71 1e-12
AT3G17480.1 | Symbols: | F-box family protein | chr3:5983199-59... 71 1e-12
AT3G21120.1 | Symbols: | F-box family protein | chr3:7406326-74... 69 6e-12
AT4G09190.1 | Symbols: | F-box family protein | chr4:5855176-58... 68 8e-12
AT3G07870.1 | Symbols: | F-box family protein | chr3:2510871-25... 67 2e-11
AT3G08750.1 | Symbols: | F-box family protein | chr3:2656716-26... 67 2e-11
AT3G23260.1 | Symbols: | F-box family protein | chr3:8313334-83... 66 3e-11
AT2G43445.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 66 3e-11
AT2G17310.1 | Symbols: SON1 | SON1 (SUPPRESSOR OF NIM1-1 1) | ch... 65 5e-11
AT1G32420.1 | Symbols: | F-box family protein | chr1:11701995-1... 65 6e-11
AT1G12870.1 | Symbols: | S locus F-box-related / SLF-related | ... 65 8e-11
AT1G25141.1 | Symbols: | UDP-3-0-acyl N-acetylglucosamine deace... 64 1e-10
AT1G50870.1 | Symbols: | F-box family protein | chr1:18855147-1... 64 1e-10
AT2G27520.1 | Symbols: | F-box family protein | chr2:11762061-1... 64 2e-10
AT1G19160.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT3G20690.1 | Symbols: | F-box protein-related | chr3:7231570-7... 63 3e-10
AT2G40910.1 | Symbols: | F-box protein-related | chr2:17069938-... 63 3e-10
AT2G40910.2 | Symbols: | F-box protein-related | chr2:17069938-... 63 3e-10
AT3G17570.1 | Symbols: | F-box family protein | chr3:6009413-60... 63 4e-10
AT3G17490.1 | Symbols: | F-box family protein | chr3:5984827-59... 62 7e-10
AT3G16210.1 | Symbols: | F-box family protein | chr3:5494533-54... 61 1e-09
AT2G31470.1 | Symbols: | F-box family protein | chr2:13407492-1... 60 2e-09
AT5G42460.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 4e-09
AT1G25055.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Cyclin-lik... 59 7e-09
AT1G24881.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Cyclin-lik... 59 7e-09
AT1G25211.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Cyclin-lik... 59 7e-09
AT1G24800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Cyclin-lik... 59 7e-09
AT1G47390.1 | Symbols: | F-box family protein | chr1:17379544-1... 59 7e-09
AT3G25460.1 | Symbols: | F-box family protein | chr3:9231581-92... 57 1e-08
AT5G51000.1 | Symbols: | F-box family protein | chr5:20742533-2... 57 2e-08
AT3G16740.1 | Symbols: | F-box family protein | chr3:5699476-57... 57 2e-08
AT3G21170.1 | Symbols: | F-box family protein | chr3:7419976-74... 57 2e-08
AT3G49520.1 | Symbols: | F-box family protein | chr3:18359584-1... 57 3e-08
AT3G22421.1 | Symbols: | F-box family protein | chr3:7949116-79... 56 3e-08
AT4G05080.1 | Symbols: | F-box family protein | chr4:2603001-26... 56 4e-08
AT5G62660.1 | Symbols: | F-box family protein | chr5:25156326-2... 56 5e-08
AT2G43440.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 5e-08
AT3G49510.1 | Symbols: | F-box family protein | chr3:18353891-1... 55 6e-08
AT1G11620.1 | Symbols: | F-box family protein | chr1:3910833-39... 54 1e-07
AT1G54550.1 | Symbols: | F-box family protein | chr1:20369689-2... 54 2e-07
AT3G20030.1 | Symbols: | F-box family protein | chr3:6990254-69... 54 2e-07
AT2G40925.1 | Symbols: | F-box family protein | chr2:17074905-1... 54 2e-07
AT1G51290.1 | Symbols: | F-box family protein (FBX10) | chr1:19... 53 2e-07
AT1G71320.1 | Symbols: | S locus F-box-related / SLF-related | ... 53 2e-07
AT5G62510.1 | Symbols: | F-box family protein | chr5:25095373-2... 53 2e-07
AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483... 53 4e-07
AT3G22940.1 | Symbols: | F-box family protein-related | chr3:81... 52 4e-07
AT1G70380.1 | Symbols: | F-box family protein | chr1:26526212-2... 51 1e-06
AT1G30790.1 | Symbols: | F-box family protein | chr1:10932713-1... 51 1e-06
AT4G19940.1 | Symbols: | F-box family protein | chr4:10806195-1... 51 1e-06
AT3G47150.1 | Symbols: | F-box family protein | chr3:17358591-1... 51 1e-06
AT5G18160.1 | Symbols: | F-box family protein | chr5:6002770-60... 50 2e-06
AT3G19470.2 | Symbols: | F-box family protein | chr3:6749766-67... 49 5e-06
AT3G51171.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 5e-06
AT3G19470.1 | Symbols: | F-box family protein | chr3:6749766-67... 49 5e-06
AT3G22770.1 | Symbols: | F-box family protein-related | chr3:80... 49 6e-06
>AT4G12560.2 | Symbols: | F-box family protein |
chr4:7441815-7443157 FORWARD
Length = 413
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 182/371 (49%), Gaps = 58/371 (15%)
Query: 2 SLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGH 61
++P +I+ DIFL+LP K L+R R LSK I+D DFI++HL+R ++T H ++L G
Sbjct: 3 TIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGA 62
Query: 62 TKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFS-VIDCCSGLFLLLEPRIINSLNTVK 120
+ +Y+VDL D L +++ + G + V +GL L S +
Sbjct: 63 LR-------LYSVDL-DSLDSVSDVEHPMKRGGPTEVFGSSNGLIGL-------SNSPTD 107
Query: 121 LVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEK- 179
L ++NP T++ RL PP SS+ P S R + +GLGYD+ +D+KVVR++ K
Sbjct: 108 LAVFNPSTRQIHRL--PP---SSIDLP-DGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKI 161
Query: 180 ----------PKEVWIYSLRSDSWRKVEDWCQIALGVMGMFVNGVMYFEGENL------- 222
P EV ++SL+ +SW+++E ++ ++ F ++Y G +
Sbjct: 162 DSEDELGCSFPYEVKVFSLKKNSWKRIESVAS-SIQLLFYFYYHLLYRRGYGVLAGNSLH 220
Query: 223 ------------ENIVSFDFATEKFSIMPFPEGYEKSCSHLR----VLEGRLCLCTLGRH 266
IV FD A E+F I+ FPE ++ VL+G LCL
Sbjct: 221 WVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQ 280
Query: 267 RTLDIYVGDKHEDGLTWSKLIKIPDYQTHTDHIRNLRPLCYSREGDKILLIEERDDFVWY 326
+D+++ ++ +W+K+ + ++ +RPL YS++ K+LL VW+
Sbjct: 281 SYVDVWMMKEYNVRDSWTKVFTVQKPKS-VKSFSYMRPLVYSKDKKKVLLELNNTKLVWF 339
Query: 327 DLNKKTTESIQ 337
DL K +++
Sbjct: 340 DLESKKMSTLR 350
>AT4G12560.1 | Symbols: | F-box family protein |
chr4:7441815-7443157 FORWARD
Length = 413
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 182/371 (49%), Gaps = 58/371 (15%)
Query: 2 SLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGH 61
++P +I+ DIFL+LP K L+R R LSK I+D DFI++HL+R ++T H ++L G
Sbjct: 3 TIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGA 62
Query: 62 TKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFS-VIDCCSGLFLLLEPRIINSLNTVK 120
+ +Y+VDL D L +++ + G + V +GL L S +
Sbjct: 63 LR-------LYSVDL-DSLDSVSDVEHPMKRGGPTEVFGSSNGLIGL-------SNSPTD 107
Query: 121 LVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEK- 179
L ++NP T++ RL PP SS+ P S R + +GLGYD+ +D+KVVR++ K
Sbjct: 108 LAVFNPSTRQIHRL--PP---SSIDLP-DGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKI 161
Query: 180 ----------PKEVWIYSLRSDSWRKVEDWCQIALGVMGMFVNGVMYFEGENL------- 222
P EV ++SL+ +SW+++E ++ ++ F ++Y G +
Sbjct: 162 DSEDELGCSFPYEVKVFSLKKNSWKRIESVAS-SIQLLFYFYYHLLYRRGYGVLAGNSLH 220
Query: 223 ------------ENIVSFDFATEKFSIMPFPEGYEKSCSHLR----VLEGRLCLCTLGRH 266
IV FD A E+F I+ FPE ++ VL+G LCL
Sbjct: 221 WVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQ 280
Query: 267 RTLDIYVGDKHEDGLTWSKLIKIPDYQTHTDHIRNLRPLCYSREGDKILLIEERDDFVWY 326
+D+++ ++ +W+K+ + ++ +RPL YS++ K+LL VW+
Sbjct: 281 SYVDVWMMKEYNVRDSWTKVFTVQKPKS-VKSFSYMRPLVYSKDKKKVLLELNNTKLVWF 339
Query: 327 DLNKKTTESIQ 337
DL K +++
Sbjct: 340 DLESKKMSTLR 350
>AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD
Length = 427
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 189/399 (47%), Gaps = 85/399 (21%)
Query: 1 MSLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHL-----NRSIETNTHKK 55
+ LPPEII +I L+LP K + RFRC+SK C+ D F K HL N S+ + H+K
Sbjct: 34 LVLPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRS-LHRK 92
Query: 56 LILFGHTKTSTVISGIYAVD---LSDGLKESVKLDNSL----NHGRFS-VIDCCSGLFLL 107
LI+ H +Y++D + DG+++ ++++ + FS +I G L
Sbjct: 93 LIVSSHN--------LYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLY 144
Query: 108 LEPRIINSLNT-------VKLV-----------------LWNPFTKRYKRLTDPPVESSS 143
+ R++ LN V++V L+NP T KRL +
Sbjct: 145 DDRRVMLKLNAKSYRRNWVEIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPEN------ 198
Query: 144 MFKPLQ-QYSYRYFDSFGLGYDAARNDHKVVRILY--EKPKEVWIYSLRSDSWRKVEDWC 200
F+P +Y F ++G G+D +D+K+V+++ E + +YSL++DSWR++ C
Sbjct: 199 -FRPKSVEYERDNFQTYGFGFDGLTDDYKLVKLVATSEDILDASVYSLKADSWRRI---C 254
Query: 201 QIALG------VMGMFVNGVMYF----EGENLENIVSFDFATEKFSIMPFPEGYEKSCSH 250
+ G+ NG +++ N +V+FD TE+F MP P+ E CSH
Sbjct: 255 NLNYEHNDGSYTSGVHFNGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAE-DCSH 313
Query: 251 ------LRVLEGRLCLCTLGRHRTLDIYVGDKHEDGLTWSKLIKIPDYQTHTDHIRNLRP 304
+ L GRLC+ DI+V ++ + +WS++ Y R+++P
Sbjct: 314 RFSNFVVGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSRIRINLLY-------RSMKP 366
Query: 305 LCYSREGDKILLIEERDDFVWYDLNKKTTESIQTVCDIK 343
LC S + D+ +L+E D V Y+ + ++ +C +K
Sbjct: 367 LC-STKNDEEVLLELDGDLVLYNFETNASSNL-GICGVK 403
>AT4G22390.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
F-box associated type 1 (InterPro:IPR017451); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT4G12560.2); Has 662 Blast hits to 662
proteins in 37 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 662; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr4:11813757-11815074 REVERSE
Length = 402
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 181/369 (49%), Gaps = 53/369 (14%)
Query: 4 PPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHTK 63
P ++I ++FL+L L++ R LSK S ID +F+ +HL R +ET H ++L G
Sbjct: 5 PTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLETGEHLMILLRGPRL 64
Query: 64 TSTVISGIYAVDLSDGLKESVKLDNSLNHGRFS-VIDCCSGLFLLLEPRIINSLNTVKLV 122
TV +D + + + + + L G F+ V +G+ L + V L
Sbjct: 65 LRTV-----ELDSPENVSD---IPHPLQAGGFTEVFGSFNGVIGLCN-------SPVDLA 109
Query: 123 LWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEK--- 179
++NP T++ RL P++ ++ R + +GLGYD+ +D KVVRI+ K
Sbjct: 110 IFNPSTRKIHRLPIEPIDFP------ERDITREYVFYGLGYDSVGDDFKVVRIVQCKLKE 163
Query: 180 -------PKEVWIYSLRSDSWRKV-------EDWCQIALGVM-----GMFVNGVMYFEGE 220
P EV ++SL+ +SW++V W ++ G+ VN +++
Sbjct: 164 GKKKFPCPVEVKVFSLKKNSWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILP 223
Query: 221 NLENIVSF------DFATEKFSIMPFP-EGYEKSCSHLRVLEGRLCLCTLGRHRTLDIYV 273
+ +++F D A++ ++ FP E Y + + VL+G +CL + +D++V
Sbjct: 224 RRQGVIAFNAIIKYDLASDDIGVLSFPQELYIEDNMDIGVLDGCVCLMCYDEYSHVDVWV 283
Query: 274 GDKHEDGLTWSKLIKIPDYQTHTDHIRNLRPLCYSREGDKILL-IEERDDFVWYDLNKKT 332
++ED +W+KL ++P ++ + + +RPL S++ KILL I + +W+DL ++
Sbjct: 284 LKEYEDYKSWTKLYRVPKPES-VESVEFIRPLICSKDRSKILLEINNAANLMWFDLESQS 342
Query: 333 TESIQTVCD 341
+ CD
Sbjct: 343 LTTAGIECD 351
>AT3G23880.1 | Symbols: | F-box family protein |
chr3:8622061-8623155 REVERSE
Length = 364
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 40/320 (12%)
Query: 2 SLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHL----NRSIETNTHKKLI 57
+LP E++ +I L+LPVK L RF+C+ S S I ++ F H T+T
Sbjct: 13 NLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYG 72
Query: 58 LFGHTKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLN 117
+ ++ I+++ + + S L + V+ C GL +
Sbjct: 73 VITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCF------HVDY 126
Query: 118 TVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILY 177
L LWNP K +RL+ +E+S ++G GYD + +D+KVV +L
Sbjct: 127 DKSLYLWNPTIKLQQRLSSSDLETSDD---------ECVVTYGFGYDESEDDYKVVALLQ 177
Query: 178 EKPK---EVWIYSLRSDSWRKVEDWCQIALGVM-------GMFVNGVM---YFEGENLEN 224
++ + E IYS R WR + GV+ G+++NG + +
Sbjct: 178 QRHQVKIETKIYSTRQKLWRSNTSF---PSGVVVADKSRSGIYINGTLNWAATSSSSSWT 234
Query: 225 IVSFDFATEKFSIMPFPEGYEKSCSHLRV--LEGRLCLCTLGRHRTLDIYVGDKHEDGLT 282
I+S+D + ++F +P P + C + + L G L + + D++V + + +
Sbjct: 235 IISYDMSRDEFKELPGPVCCGRGCFTMTLGDLRGCLSMVCYCKGANADVWVMKEFGEVYS 294
Query: 283 WSKLIKIPDYQTHTDHIRNL 302
WSKL+ IP TD +R L
Sbjct: 295 WSKLLSIPGL---TDFVRPL 311
>AT3G22650.1 | Symbols: ATSFL61, SFL61, CEG | CEG (CEGENDUO) |
chr3:8014809-8015960 FORWARD
Length = 372
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 142/325 (43%), Gaps = 67/325 (20%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
LP +II +I ++PV+ L +F+ K + + D FI +K L LF
Sbjct: 9 LPIDIIEEICCRIPVEYLTQFKLTCKQWFALLKDKRFI------------YKYLDLFQEQ 56
Query: 63 KTSTVISGIYAV-DLSDGLKESVKLDNSL-NHGRFSVIDCCSGLFLLLEPRIINSLN-TV 119
+ I I + D G + S + N + S + C GL L R N + +
Sbjct: 57 ERFIRIDRIVQIIDPVKGARSSSPIPQEFDNVAQISTMVHCDGLLLC---RCKNERSRSY 113
Query: 120 KLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYD-AARNDHKVVRIL-- 176
KL +WNPF R K + +P+ YS D +G GYD R+++K++RI
Sbjct: 114 KLAVWNPFLSRVKWI-----------EPMDFYSSN--DFYGFGYDNVCRDEYKLLRIFDG 160
Query: 177 -----------YEKPKEVWIYSLRSDSWRKVEDWCQIALGVMGMFVNGVMYFEG--ENLE 223
YE PK + IY +SDSWR V+D + V G MY+ N
Sbjct: 161 EIEDESEIAGSYE-PK-IQIYDFKSDSWRIVDD--------TRVSVKGNMYWIAHWNNRP 210
Query: 224 NIV--SFDFATEKFSI---MPFPEGYEKSCSHLRVLEGRLCLC-TLGRHRTLDIYVGDKH 277
I SFDF+TE F I +PF + + + RL L G +++++ +K
Sbjct: 211 EIFIQSFDFSTETFKIVCNLPFECNVLDTAALSSLRGDRLSLLHQSGETMKIEVWITNKL 270
Query: 278 EDG-LTWSKLIKI--PDYQT-HTDH 298
D ++W+K + + PD T HTD
Sbjct: 271 SDEVVSWTKYVDVTSPDLPTLHTDQ 295
>AT4G04690.1 | Symbols: | F-box family protein (FBX15) |
chr4:2373999-2375135 REVERSE
Length = 378
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 104/241 (43%), Gaps = 30/241 (12%)
Query: 2 SLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGH 61
SLP E++ +I K P + L RF+ K I F+ HL+ S E + I
Sbjct: 10 SLPFELVEEILKKTPAESLNRFKSTCKQWYGIITSKRFMYNHLDHSPE-----RFIRIDD 64
Query: 62 TKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFL-LLEPRIINSLNTVK 120
KT ++ + + +S D + F+ + C GL L +
Sbjct: 65 HKTVQIMDPMTGI-----FSDSPVPDVFRSPHSFASMVHCDGLMLCICSDSSYERTREAN 119
Query: 121 LVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYD-AARNDHKVVRI---L 176
L +WNP TK+ K + +PL SY D FG+GYD R ++K+VR +
Sbjct: 120 LAVWNPVTKKIKWI-----------EPLD--SYYETDYFGIGYDNTCRENYKIVRFSGPM 166
Query: 177 YEKPKEVWIYSLRSDSWRKVE-DWCQIALGVMGMFVNGVMYFEGENLEN-IVSFDFATEK 234
E IY +SDSWR ++ + + G+ V G MY+ + E I+ FDF+ E
Sbjct: 167 SFDDTECEIYEFKSDSWRTLDTKYWDVYTQCRGVSVKGNMYWIADTKEKFILRFDFSMET 226
Query: 235 F 235
F
Sbjct: 227 F 227
>AT3G10430.1 | Symbols: | F-box family protein |
chr3:3242750-3243862 REVERSE
Length = 370
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 115/251 (45%), Gaps = 43/251 (17%)
Query: 2 SLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTI-DDSDFIKAHLNRSIETNTHKKLILFG 60
SLP ++I++I + P + LLRF+ K I +D F+ HL++S
Sbjct: 4 SLPFDLILEILQRTPAESLLRFKSTCKKWYELISNDKRFMYKHLDKS------------- 50
Query: 61 HTKTSTVISGIYAVDLSDGLKESVKLD---NSLNHGRFSVIDCCSGLFLLLEPRIINSLN 117
TK I V + D + E + + N L H F++I C GL L + + S
Sbjct: 51 -TKRFLRIENRERVQILDPVTEILAVSTIPNELRHKYFTLIH-CDGLMLGMCYEELGS-- 106
Query: 118 TVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAA-RNDHKVVRIL 176
L +WNP ++ K + P PL Y D G GYD R+++K++R
Sbjct: 107 DPNLAVWNPVMRKIKWIKPSP--------PL--VCYWGSDYLGFGYDKTFRDNYKILRFT 156
Query: 177 Y-------EKPKEVWIYSLRSDSWRKVEDW--CQIALGVMGMFVNGVMYF-EGENLEN-I 225
Y E + IY S SWR +E +I + V G+ VNG MY+ E + +N I
Sbjct: 157 YLGDDDDDESYPKCQIYEFNSGSWRSIEAKFDGEIDVEVDGVSVNGSMYWIELQEKKNFI 216
Query: 226 VSFDFATEKFS 236
+SFDF+ E F+
Sbjct: 217 LSFDFSKETFN 227
>AT3G17540.1 | Symbols: | F-box family protein |
chr3:6002783-6003973 FORWARD
Length = 396
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 143/320 (44%), Gaps = 58/320 (18%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLIL---F 59
LP EI +I ++P K L + K + D F+K + +S ++L+L F
Sbjct: 10 LPHEIESEILSRVPTKSLAKLHTTCKRWYALFRDPRFVKKNFGKS-----ERRLMLHSNF 64
Query: 60 GHTKTSTVISGIYAVDLSDG---LKESVKLDNSLNHGRFSV--IDCCSGLFLLLEPRIIN 114
G K + + GI L+ G L+ + KL N ++ I C GL L +
Sbjct: 65 GVYKITDDLHGI----LNSGDPSLEFTSKLSNLKISEDLTITKIFHCDGLIL------CS 114
Query: 115 SLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGY---DAARNDHK 171
+ +LV+WNP T + + KP ++ YR DS+ LGY ++ +++K
Sbjct: 115 TKENTRLVVWNPCTGQ-----------TRWIKPSKR--YRSDDSYCLGYVNSKSSYHNYK 161
Query: 172 VVRILYEKP------KEVWIYSLRSDSWRKVEDWCQIALGVM--GMFVNGVMYF---EGE 220
++R + E IY S+SWR ++D+C G+ GM + G YF E E
Sbjct: 162 ILRYCFYYNDQDACVSEFEIYDFSSESWRVLDDYCTREWGLFCHGMSLKGNTYFVAGEKE 221
Query: 221 NLENIVSFDFATEKFSIMPFP-EGYEKSCSHLRVLEGRLCLCTLGRH-----RTLDIYVG 274
++ FDF TE+F +P P + ++ + + + G L L ++ + I+V
Sbjct: 222 TGFFMLYFDFKTERFERLPLPYQSFDSEDTAVLSIVGGEKLAVLHQNIQSFSNEMRIWVT 281
Query: 275 DKHEDG--LTWSKLIKIPDY 292
+K ++ LTWS DY
Sbjct: 282 NKIDEAKDLTWSNFFLAVDY 301
>AT3G20710.1 | Symbols: | F-box protein-related |
chr3:7237911-7238999 REVERSE
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 156/355 (43%), Gaps = 71/355 (20%)
Query: 2 SLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGH 61
+LP +++ +I ++P K L R K+ + F +++++ + + L++
Sbjct: 5 NLPKDLVEEILSRVPFKYLRAIRSTCKNWYDLSKNRSFANKNIDKAAVSGEKEFLMI--- 61
Query: 62 TKTSTVISGIY-------AVDLSDGLKES-VKLDNSLNHGRFSVIDCCSGLFLLLEPRII 113
T+ + G+ + DLS LK V D + + S + C+G+FL + ++
Sbjct: 62 TQFNVFWVGVNLHRSQNNSFDLSIQLKAKIVSRDKKDDLFQKSQVIHCNGVFLCVREKM- 120
Query: 114 NSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVV 173
LV+ NP+ + KR+ P + FD + LGYD + HK++
Sbjct: 121 -------LVVLNPYWGQTKRIMPRP-------------PFGCFDRYALGYDKSSGSHKIL 160
Query: 174 RILYEKPKEVWIYSLRSDSWRKVEDWCQIALGVM--GMFVNGVMYFEGENLENI----VS 227
R+ + IY L S SW + + + M G+ +NG Y+ ++ E+I +
Sbjct: 161 RLFGVNQNNLNIYDLSSSSWMIPDGTLERDMEYMKQGVSLNGDTYWYAKDKESIDWYLLC 220
Query: 228 FDFATEKFSI-MPFP---EGYE-----KSCSHLRVLEGRLCLCTLGRHRTLDIYVGDKHE 278
FDF E+F +P P EGY KS S L+ E +L + T+ I+V +K E
Sbjct: 221 FDFTRERFGTPLPLPFSNEGYTLHKGYKSLSALK--EEKLAVLLWD---TMVIWVTNKIE 275
Query: 279 -DGLTWSKLIKIPDYQTHTDHIRNLRPLCYSREGD-------KILLIEERDDFVW 325
D ++WS +K+ ++ P Y R G+ K+ ++ E+D W
Sbjct: 276 PDAVSWSIFLKL-----------DMEPSIYCRYGNFFIDEEKKVAVVFEKDSSSW 319
>AT4G38870.1 | Symbols: | F-box family protein |
chr4:18132583-18133863 REVERSE
Length = 426
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 149/327 (45%), Gaps = 48/327 (14%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
LP ++I++I KL +KPL+RF C+SK S I D F+K LN S++ + +F
Sbjct: 53 LPVDLIMEILKKLSLKPLIRFLCVSKLWASIIRDPYFMKLFLNESLK-RPKSLVFVFRAQ 111
Query: 63 KTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVI----DCCSGLFLLLEPRI---INS 115
++ S ++ LK + ++ +S + S I C + + + P + I
Sbjct: 112 SLGSIFSSVH-------LKSTREISSSSSSSSASSITYHVTCYTQQRMTISPSVHGLICY 164
Query: 116 LNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRI 175
LV++NP T+R +T P +++ + + QY +GYD ++KVV I
Sbjct: 165 GPPSSLVIYNPCTRR--SITLPKIKAGR--RAINQY---------IGYDPLDGNYKVVCI 211
Query: 176 LYEKP---------KEVWIYSL--RSDSWRKVEDWCQIALGVM-GMFVNGVMYFEG---- 219
P +E+ + +L R SWR + D V + +NGV+Y+
Sbjct: 212 TRGMPMLRNRRGLAEEIQVLTLGTRDSSWRMIHDIIPPHSPVSEELCINGVLYYRAFIGT 271
Query: 220 -ENLENIVSFDFATEKFSIMPFPEGYEKSCSHLRVLEGRLCLCTLGRHRT--LDIYVGDK 276
N I+SFD +EKF ++ P + +S S L EG+L + + + + +++ +
Sbjct: 272 KLNESAIMSFDVRSEKFDLIKVPCNF-RSFSKLAKYEGKLAVIFYEKKTSGIIGLWILED 330
Query: 277 HEDGLTWSKLIKIPDYQTHTDHIRNLR 303
+G K +P+ + + R L+
Sbjct: 331 ASNGEWSKKTFALPNLAASSTNSRILK 357
>AT3G17480.1 | Symbols: | F-box family protein |
chr3:5983199-5984320 FORWARD
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 142/320 (44%), Gaps = 50/320 (15%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
L +++ DI ++P L+R R K + ++D FIK H + + + L +
Sbjct: 11 LTEDLVEDILSRVPATSLVRLRSTCKQWNAILNDRRFIKKHFDTAEKEYLDMLLRSLRVS 70
Query: 63 KTSTVISGIY-AVDLSDGLKESVKLDNSL-NHGRFSVIDC--CSGLFLLLEPRIINSLNT 118
S + G++ +D S LK + L L N G+ + C+GL L NT
Sbjct: 71 SMSVNLHGLHDNIDPSIELKRELNLKGLLCNSGKVESFEVFHCNGLLLFT--------NT 122
Query: 119 VKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAAR--NDHKVVRIL 176
+V+WNP T + K + ES++ RY + LGY+ D+K++R L
Sbjct: 123 STIVVWNPCTGQTKWI---QTESANT---------RYH-KYALGYENKNLCRDYKILRFL 169
Query: 177 YEKPK-EVWIYSLRSDSWR---KVEDWCQIALGVMGMFVNGVMYF--------EGENLEN 224
+ E+ IY S SWR VE ++ +G GM V G Y+ +GE L N
Sbjct: 170 DDGTNFELEIYEFNSSSWRVLDSVEIDFELDIGSQGMSVKGNTYWIVIDDHEVDGE-LVN 228
Query: 225 --IVSFDFATEKFS---IMPFPEG-YEKSCSHLRVLEGRLCLCTLGRHR-TLDIYVGDKH 277
+ SFDF E+F +PF Y S V E RL + T++I+V +
Sbjct: 229 CFLTSFDFTRERFGPHVCLPFQTSWYSDVISLSSVREERLSVLFHEEDSLTMEIWVTNDI 288
Query: 278 EDGL--TWSKLIKIPDYQTH 295
D + +WSK +++ D TH
Sbjct: 289 TDTIVTSWSKFLRV-DLYTH 307
>AT3G21120.1 | Symbols: | F-box family protein |
chr3:7406326-7407429 FORWARD
Length = 367
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 57/320 (17%)
Query: 1 MSLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFG 60
M LP +++++I K+P L RFR + + + D F K H + + +I+
Sbjct: 1 MHLPEDLVLEILSKVPAVSLARFRSTCRRWNALVVDGSFAKKHY--AYGPRQYPIVIMLI 58
Query: 61 HTKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPR--------I 112
+ V ++ ++ ++G S KL G+FS+ D S ++ R +
Sbjct: 59 EFRVYLVSIDLHGINNNNG-APSAKLT-----GQFSLKDPLSNSSEEVDIRNAFHCDGLL 112
Query: 113 INSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKV 172
+ +LV+WNP + K + + SY+ D + LGYD + +K+
Sbjct: 113 LCCTKDRRLVVWNPCSGETKWIQ-------------PRNSYKESDLYALGYDNRSSSYKI 159
Query: 173 VRI-LYEKP--KEVWIYSLRSDSWRKV---EDWCQIALGVMGMFVNGVMY--------FE 218
+R+ P E +Y S SWR V D+ GM V G Y +
Sbjct: 160 LRMHPVGNPFHIESEVYDFASHSWRSVGVTTDFHIQTNESYGMNVKGTTYWFALSKDWWS 219
Query: 219 GENLENIVSFDFATEKFSIMPFPEGYEKSCSHLRVL------EGRLCL-CTLGRHRT--L 269
++ ++SFDF+ E+F +P P + HL V+ E +LC+ TLG L
Sbjct: 220 SDDRRFLLSFDFSRERFQCLPLPADVKN--LHLTVVLSVTREEQQLCMFATLGAGNVYKL 277
Query: 270 DIYVGDKHEDG---LTWSKL 286
D++V K E+ LTW+K
Sbjct: 278 DVFVATKTEETTGELTWTKF 297
>AT4G09190.1 | Symbols: | F-box family protein |
chr4:5855176-5856327 FORWARD
Length = 383
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 32/269 (11%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
+P ++IV+I LP K ++RFR +SK S I DF + + RS+ + LI H
Sbjct: 22 IPLDLIVEIVSSLPAKSIVRFRSVSKLWSSIITTPDFTSSVVTRSLSSRPCVLLIFQKHD 81
Query: 63 KTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKLV 122
K S ++ + E+ + N+G+ + GL L +T +
Sbjct: 82 KLFFFASPVHQKKTCPNV-ENFQYTIP-NNGKLQRCESVHGLIYL-------ETSTNVMF 132
Query: 123 LWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEKPKE 182
+ NP TK + T P ++S +PL + LGYD +KV+ IL E+ K
Sbjct: 133 IRNPITKSF--FTLPKLDSKEG-RPLTGF---------LGYDPINGKYKVLCILKERNK- 179
Query: 183 VWIYSLRS-DSWRKVEDWCQIALGVMGMF--VNGVMYFEGENLEN------IVSFDFATE 233
+ I +L + +SWR + V G ++GV+Y+EG + I+SFD +E
Sbjct: 180 IGILTLGAQESWRILSKGFLSHYKVTGYAKCIDGVIYYEGSFGDGLRQELAIMSFDLRSE 239
Query: 234 KFSIMPFPEGYEKSCSHLRVLEGRLCLCT 262
KFS++ P+ + EGRL L +
Sbjct: 240 KFSLIKHPKK-SSIATCWSSYEGRLALVS 267
>AT3G07870.1 | Symbols: | F-box family protein |
chr3:2510871-2512124 FORWARD
Length = 417
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 137/331 (41%), Gaps = 66/331 (19%)
Query: 2 SLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGH 61
SLP +II DIF +LP+ + R + +S S + H S +++ K L H
Sbjct: 27 SLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQ------HGRLSSSSSSPTKPCLLLH 80
Query: 62 TKTSTVISGIYAVDLSDGLK----ESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLN 117
S + +G++ +DLS+ K + L + + F V+ C+GL L +SL
Sbjct: 81 C-DSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCL-----SDSLY 134
Query: 118 TVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDS---FGLGYDAARNDHKVVR 174
L L+NPFT ++S+ L + S +Y D FG G+ ++KV++
Sbjct: 135 NDSLYLYNPFT------------TNSL--ELPECSNKYHDQELVFGFGFHEMTKEYKVLK 180
Query: 175 ILY-------------------EKPKEVWIYSLRSDSWRKVEDWCQIALGVMGM------ 209
I+Y K EV I +L S + + W +
Sbjct: 181 IVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSE 240
Query: 210 -FVNGVMYFEGENLENI-----VSFDFATEKFSIMPFPE--GYEKSCSHLRVLEGRLCLC 261
VNG ++F ++ VSFD E+F +P P+ G ++ L L+G LC
Sbjct: 241 ALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAV 300
Query: 262 TLGRHRTLDIYVGDKHEDGLTWSKLIKIPDY 292
G + LDI+V + +W K I Y
Sbjct: 301 VYGNYGKLDIWVMKTYGVKESWGKEYSIGTY 331
>AT3G08750.1 | Symbols: | F-box family protein |
chr3:2656716-2657825 REVERSE
Length = 369
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 43/247 (17%)
Query: 2 SLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGH 61
SLP E+I +I K+P + L+RF+ K + I + F+ HL+ H F
Sbjct: 11 SLPFELIEEILYKIPAESLIRFKSTCKKWYNLITEKRFMYNHLD-------HYSPERFIR 63
Query: 62 TKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKL 121
T +I + + LSD L D + +S++ C GL L + NS L
Sbjct: 64 TYDQQIIDPVTEI-LSDALIPDEFRD---LYPIYSMVH-CDGLMLCTCRKWDNS-----L 113
Query: 122 VLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYD--AARNDHKVVRILYEK 179
+WNP + K + KP Y + D G+GYD +R+++K++++L
Sbjct: 114 AVWNPVLREIKWI-----------KP--SVCYLHTDYVGIGYDDNVSRDNYKILKLLGRL 160
Query: 180 PKE------VWIYSLRSDSWRKVE---DWCQIALGVMGMFVNGVMYFEGENLEN--IVSF 228
PK+ IY +SDSW+ + DW G+ V G MY+ + E+ I+ F
Sbjct: 161 PKDDDSDPNCEIYEFKSDSWKTLVAKFDWDIDIRCNNGVSVKGKMYWIAKKKEDFTIIRF 220
Query: 229 DFATEKF 235
DF+TE F
Sbjct: 221 DFSTETF 227
>AT3G23260.1 | Symbols: | F-box family protein |
chr3:8313334-8314422 FORWARD
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 131/308 (42%), Gaps = 43/308 (13%)
Query: 2 SLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGH 61
SLP E+ +I ++P K L R R SK + F K H N K+ ++
Sbjct: 5 SLPVELQEEILSRVPAKYLARLRSTSKQWNALSKTGSFAKKH-----SANATKEPLIIML 59
Query: 62 TKTSTVISGIYAVDLSDGLKESVKLDNS--LNHGRFSVIDCCSGLFLLLEPRIINSLNTV 119
+ ++ + + + + +S +L + L S + C GL LL S+
Sbjct: 60 KDSRVYLASVNLHGVHNNVAQSFELGSRLYLKDPHISNVFHCDGLLLLC------SIKEN 113
Query: 120 KLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYD--AARNDHKVVRILY 177
L +WNP + K + KP Y Y+ D + LGYD ++ +KV+R++
Sbjct: 114 TLEVWNPCSGEAK-----------LIKPRHSY-YKESDFYALGYDNKSSCKKYKVLRVIS 161
Query: 178 EK------PKEVWIYSLRSDSWRKVEDWCQIAL-GVMGMFVNGVMYFEGEN----LENIV 226
+ E IY +DSWR ++++ + V G Y+ N + +
Sbjct: 162 QVHVQGDFKIEYEIYDFTNDSWRVHGATTELSIRQKHPVSVKGSTYWVVRNRYFPYKYFL 221
Query: 227 SFDFATEKFSIMPFPEGYEKSCSHLRVL-EGRLCLCTLGRHRT----LDIYVGDKHEDGL 281
SFDF+TE+F + P+ + + L V+ E +LCL T L+++V +
Sbjct: 222 SFDFSTERFQSLSLPQPFPYLVTDLSVVREEQLCLFGYYNWSTTSEDLNVWVTTSLGSVV 281
Query: 282 TWSKLIKI 289
+WSK + I
Sbjct: 282 SWSKFLTI 289
>AT2G43445.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G43440.1); Has 621
Blast hits to 612 proteins in 23 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 619;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr2:18041511-18042995 FORWARD
Length = 405
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 137/336 (40%), Gaps = 41/336 (12%)
Query: 6 EIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHTKTS 65
E++ +IFL LP+K +L+F+ +SK S ++ + F++ R+++ N K IL +
Sbjct: 16 ELLEEIFLGLPLKSILKFKTVSKQWRSILESNLFVERR--RTLQKNHPK--ILAAYNCDY 71
Query: 66 TVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKLVLWN 125
GI +G +E V L + C GL + EP N LN L
Sbjct: 72 CTRPGILPKSQFEGDEEIVYLHTDATQPSMT----CDGLVCITEPGWFNVLNVSTGQL-- 125
Query: 126 PFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEKPKEVWI 185
+R+ DP +++ + G G D +K+VR+ + E I
Sbjct: 126 ---RRFLPGPDPGPQANWL--------------LGFGRDKVTGKYKIVRMCFHDCYEFGI 168
Query: 186 YSLRSDSWRKVEDWCQIA-LGVMGMFVNGVMYFEGENLENIV-SFDFATEKFS-IMPFPE 242
+ S W K+ I +G + VNG +Y+ ++ I+ + D E F+ + P
Sbjct: 169 LDIESGEWSKLMSPPHIMRVGSKSVCVNGSIYWLQISVSYIILALDLHQETFNGVYHLPA 228
Query: 243 GYEKSCSHLRVLEGRLCLCT---LGRHRTLDIYVGDKHEDG----LTWSKLIKIPDYQ-- 293
+ + L LE RL + +G L+I+ D E G TWSK I
Sbjct: 229 TWVTQDTQLVNLEDRLAMAMTTKVGPEWILEIWSMDIEEKGWSKRYTWSKAYSISLAHRV 288
Query: 294 --THTDHIRNLRPLCYSREGDKILLIEERDDFVWYD 327
+ R P+ S++G+ + + F +Y
Sbjct: 289 VVSWPWQKRWFTPVSVSKQGNLVFYDNHKRLFKYYS 324
>AT2G17310.1 | Symbols: SON1 | SON1 (SUPPRESSOR OF NIM1-1 1) |
chr2:7531212-7532324 FORWARD
Length = 370
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 123/269 (45%), Gaps = 64/269 (23%)
Query: 1 MSLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFG 60
M+LP E+ DI +LP L+RFR +SK S +D FI HL+RS + I+
Sbjct: 1 MALPWELEEDILSRLPPISLVRFRTVSKHWNSLFNDKTFINNHLSRS-----RPEFIILT 55
Query: 61 HTKTSTVISGIYAVDLSD--GLKESVKLDNSLN---HGRF-----SVIDCCSGLFLLLEP 110
++K IY+VD+ D + +++L H R ++I+ C FL
Sbjct: 56 NSK-------IYSVDIIDHNNIDPTIRLHEIPTYDIHSRGTDLNRTIINTCDE-FLFYNY 107
Query: 111 RIINSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDH 170
R +++ LWNP+ ++ + + +Y+ + F FGLGYD +R +
Sbjct: 108 RYWDNMT----ALWNPWLRQVRWI---------------EYANQEFCVFGLGYDNSRPE- 147
Query: 171 KVVRILYE--------KPKEVWIYSLRSDSWRKV-----EDWCQIALGVM-GMFVNGVMY 216
KV +IL + ++V IY SDS R + +DW + +NG +Y
Sbjct: 148 KVYKILGHLFCHGKVLRDQKVVIYECASDSLRFIDRPEDDDWPITETAKRSNVSLNGNLY 207
Query: 217 FEG-ENLEN----IVSFDFATEKFSIMPF 240
+ G N EN I FDF+TE F PF
Sbjct: 208 WFGCSNYENDEYYIRIFDFSTEDFK--PF 234
>AT1G32420.1 | Symbols: | F-box family protein |
chr1:11701995-11702903 FORWARD
Length = 302
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 128/294 (43%), Gaps = 46/294 (15%)
Query: 1 MSLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDD-SDFIKAHLNRSIETNTHKKLILF 59
+++P ++ V+I KLP K LLRF+C+SK S I DFI + + RS+ + + L
Sbjct: 35 VNIPLDLTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRSLTQPPPRDIKLI 94
Query: 60 GHTKTST------VISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRII 113
H + + S Y + KES+ S H +I C S P +
Sbjct: 95 FHHQVLYPGPHFFIFSSTYPQNTD---KESLTTRASSYHYVRGLICCWSHC-----PTTV 146
Query: 114 NSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVV 173
+ ++NP T++Y + D Y+Y ++ GYD N +KV+
Sbjct: 147 D--------IYNPTTRQYYTVPD-------------TNRYQYIETCFFGYDPVENQYKVM 185
Query: 174 RI----LYEKPKEVW-IYSLRSDSWRKVEDWCQIALGVMGMFVNGVMYFEGENLEN---- 224
+ + E P +V+ + WR ++ L + +NGV+Y++ N
Sbjct: 186 VLPKYYMEESPCQVFTVGDPIEKPWRDIQGIGVHFLLKDAVCINGVIYYQATNEYGSTYF 245
Query: 225 IVSFDFATEKFSIMPFPEGYEKSCSHLRVLEGRLCLCTLGRHRTLDIYVGDKHE 278
+VSFD +EKF+ + P+ L +G+L L + + L+I+V + E
Sbjct: 246 LVSFDVRSEKFNHVKAPKILTDHPCTLINYQGKLGLIMCCK-KGLEIWVMEDAE 298
>AT1G12870.1 | Symbols: | S locus F-box-related / SLF-related |
chr1:4387129-4389110 REVERSE
Length = 416
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 158/377 (41%), Gaps = 43/377 (11%)
Query: 2 SLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNT-HKKLILFG 60
SLP +++ +IFLKLPVK L+RF+ LSK ST++ F + HL + ++ H K+++
Sbjct: 32 SLPDDVVEEIFLKLPVKALMRFKSLSKQWRSTLESCYFSQRHLKIAERSHVDHPKVMIIT 91
Query: 61 HTKTSTVISGIYAVDLSDGLKESVKLDNSLN--HGRFSVIDCCSGLFLLLEPRIINSLNT 118
+ + L S L N H + C G+F + P+ T
Sbjct: 92 EKWNPDIEISFRTISLESVSFLSSALFNFPRGFHHPIYASESCDGIFCIHSPK------T 145
Query: 119 VKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDA--ARNDHKVVRIL 176
+ + NP T+ +++L PP L D + + A D+K+V +
Sbjct: 146 QDIYVVNPATRWFRQL--PPARFQIFMHKLNPTLDTLRDMIPVNHLAFVKATDYKLVWLY 203
Query: 177 YEKPKEVW---IYSLRSDSWRKVEDWC----QIALGVMGMFVNGVMYF--EGENLE-NIV 226
V ++ ++++WR + C +I NG +Y+ E N E ++
Sbjct: 204 NSDASRVTKCEVFDFKANAWRYLT--CIPSYRIYHDQKPASANGTLYWFTETYNAEIKVI 261
Query: 227 SFDFATEKFSIMPFPE---GYEKSCSHLRVLEGRLCLC-TLGRHRTL-DIYVGDKHEDGL 281
+ D TE F ++P P E S + +++ LC+ T G + + +I+ ED
Sbjct: 262 ALDIHTEIFRLLPKPSLIASSEPSHIDMCIIDNSLCMYETEGDKKIIQEIWRLKSSEDA- 320
Query: 282 TWSKLIKIPDYQTHTDHIR-----NLRPLCYSREGDKILLIEERDDFVWYDLNKKTTESI 336
W K+ I + H NL LCY + D L+E Y +KK S
Sbjct: 321 -WEKIYTINLLSSSYCHFHVLDGYNLTRLCYWTQKD---LVESSTPVAIYK-DKKIILSH 375
Query: 337 QTVCDIKKHYRLKFFNL 353
+ C++ K RL+ L
Sbjct: 376 RYTCNLGK--RLEVLEL 390
>AT1G25141.1 | Symbols: | UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related |
chr1:8817678-8822328 FORWARD
Length = 925
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 135/322 (41%), Gaps = 80/322 (24%)
Query: 3 LPPEIIVD-IFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGH 61
LPP+++ + I ++P+ L R K + D ++ HL RS E
Sbjct: 539 LPPKLVGEKILTRIPITSLRAVRSTCKLWNALTKDRVLVRFHLRRSKE------------ 586
Query: 62 TKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKL 121
+ D + S+K + LN S + C GL L + + + ++
Sbjct: 587 -------------EEEDTMDLSIKQVDLLNQVEISRVYHCDGLLLCV------AKDNSRV 627
Query: 122 VLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEKPK 181
V+WNP+ + R P ES+ DS+ LGYD RN HK++R++ +
Sbjct: 628 VVWNPYLGQ-TRWIRPRTESN------------IGDSYALGYDINRN-HKILRMVQTRNV 673
Query: 182 EVW---IYSLRSDSWRKVEDWCQIALG----VMGMFVNGVMYF-------EGE------- 220
V+ IY LRS+SWR +E + + G+ V G YF GE
Sbjct: 674 SVYRYEIYDLRSNSWRVLEVTPNGEMDPNHPLYGVSVKGNTYFFAHEDSSSGEIDEDGDI 733
Query: 221 -NLEN-IVSFDFATEKFSI---MPFPEGYEKSCS-------HLRVLEGRLCLCTLGRHRT 268
+LE+ ++ FDF TE F + +PF + + + L VL L + R T
Sbjct: 734 IDLEDFLLCFDFTTETFGLRLPLPFHSTIDATVTLSCVRDQQLAVLYHNEGLHSDDRFTT 793
Query: 269 LDIYVGDKHE-DGLTWSKLIKI 289
++ +V E + ++WSK + +
Sbjct: 794 VEFWVTTSIEPNSVSWSKFLTV 815
>AT1G50870.1 | Symbols: | F-box family protein |
chr1:18855147-18856337 FORWARD
Length = 396
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 4 PPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHTK 63
P ++I++I L+LPVK +LRFRC+SK ST D F ++ RS +T L++F K
Sbjct: 32 PLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEARS---STRPSLLMFFKNK 88
Query: 64 TSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKLVL 123
+ + KE+ ++ C F +I+ + K ++
Sbjct: 89 DKLFVFTF--PHHNQNSKETHSYSQHVDSYHIKYPKYCCFPFTESVHGLISFRISTKPII 146
Query: 124 WNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEKPK-E 182
WNP +++ L P + S++ F LGYD HK++ + + E
Sbjct: 147 WNPTMRQFLILPKP------------EKSWKGLSVF-LGYDPVEGKHKLMCMNRDNTSDE 193
Query: 183 VWIYSLRS--DSWRKVEDWCQ--IALGVMGMFVNGVMYFEGE-------NLENIVSFDFA 231
+ +L S + WR+++ + L G +NGV+Y++ + I+SF+
Sbjct: 194 CRVLTLGSAQEKWRRIKSNLKHRSILRYYGQCINGVIYYQAYIDQMGFISNPTIMSFEVR 253
Query: 232 TEKFSIMPFPEG 243
+EKF + P G
Sbjct: 254 SEKFDTITLPSG 265
>AT2G27520.1 | Symbols: | F-box family protein |
chr2:11762061-11763104 FORWARD
Length = 347
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 158/373 (42%), Gaps = 65/373 (17%)
Query: 1 MSLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFG 60
+ LP +++ +I +LP L R R K + D +FI +++ + + L FG
Sbjct: 4 LDLPWDLVDEILSRLPATSLGRLRFTCKRWNALFKDPEFITKQFHKAAKQDLVLMLSNFG 63
Query: 61 HTKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVK 120
+Y+ +S LKE N+ + + C+GL L N K
Sbjct: 64 ----------VYS--MSTNLKEIP------NNIEIAQVFHCNGLLLC----STEEGNKTK 101
Query: 121 LVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAAR---NDHKVVRILY 177
LV+ NP T + + + +P Y+Y + + G G ++ + + +K++RI Y
Sbjct: 102 LVVVNPCTGQTRWI-----------EPRTDYNYNHDIALGYGNNSTKKSYDSYKILRITY 150
Query: 178 EKPKEVWIYSLRSDSWRKVEDWCQIALGVMGMFVNGV-----MYFEGENLENIVSFDFAT 232
K V I+ L+S+SWR + ++ V + GV Y+ NI+SFDF T
Sbjct: 151 -GCKLVEIFELKSNSWRVLS---KVHPNVEKHYYGGVSFKGNTYWLSYTKFNILSFDFTT 206
Query: 233 EKFSIMPFPEGYEKSCSHLRVLEGRLCLCTLGRHR----TLDIYVGDK--HEDGLTWSKL 286
E F +P P Y+ L + R L R R + I++ +K E L+WSK
Sbjct: 207 ETFRSVPLPFLYQDGFVTLALSVVREEQLLLLRSRFDMGQVGIWMCNKIDTETVLSWSK- 265
Query: 287 IKIPDYQTHTDHIRNLRPLCYSR---EGDKILLIEERDDFVW-----YDLNKKTTESIQT 338
+ D +R+L + R E DK +++ + DD W Y + K + +
Sbjct: 266 ----SFTLEFDSLRDLPVMSILRIFIEEDKKVIVVDCDD-RWKENMIYIVGKNGFKKLSY 320
Query: 339 VCDIKKHYRLKFF 351
D +RL FF
Sbjct: 321 EKDRSNLWRLPFF 333
>AT1G19160.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
type 3 (InterPro:IPR013187), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT5G52610.1); Has
1084 Blast hits to 1065 proteins in 39 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1084;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:6614162-6615214 REVERSE
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 54/303 (17%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
+P + +V+I L+LPVK L RF C+SK S I FI + +R+ +T + ++F
Sbjct: 2 IPEDPLVEILLRLPVKSLARFLCVSKRCYSIIRSRHFINLYQSRA---STRESRVMFAFR 58
Query: 63 KTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKLV 122
T+T + LS +D++ + + C +GL I + +L
Sbjct: 59 DTNTFFRWNF-FSLSQPPSSVTNIDST----SYCMPVCVNGL--------ICVEHMFRLW 105
Query: 123 LWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYE---K 179
+ NP TK+ D P +Q++ Y +GYD +KV+ + E
Sbjct: 106 ICNPVTKKITLFPD--------CGPRKQFTTWY-----MGYDPINYQYKVLYLSREHLIA 152
Query: 180 PKEVWIYSLRSD-SWRKVE-DWCQIALGVMGMFVNGVMYFEGENLEN--IVSFDFATEKF 235
P V +++ + SWR +E D + G+ +GV+Y+ + IV FD TEKF
Sbjct: 153 PYIVEVFTFGDEGSWRMIEADENFHSPETRGVCTHGVLYYGAYTGDGAKIVRFDVRTEKF 212
Query: 236 SIMPFPEGYEKSCS---------HLRVLEGRLCLCTLGRHRTLDIYV---GDKHEDGLTW 283
F E ++CS L +G+L L T D++V +KHE W
Sbjct: 213 G--KFIEMPAEACSIHGVYLGLYTLLDYQGKLGLLATQATSTYDLWVLEDAEKHE----W 266
Query: 284 SKL 286
SK+
Sbjct: 267 SKV 269
>AT3G20690.1 | Symbols: | F-box protein-related |
chr3:7231570-7232682 REVERSE
Length = 370
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 161/365 (44%), Gaps = 61/365 (16%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
LP +++ +I +LP+ L R K+ F H+ ++ + + LI+
Sbjct: 6 LPHDLVEEILSRLPLISLKAMRSTCKTWNVLSKHRSFANKHIG-NVTASGKRDLIMIKDC 64
Query: 63 KTSTVISGIYAV-------DLSDGLKESVKLDN-SLNHGRFSVIDCCSGLFLLLEPRIIN 114
K ++ ++ + DLS K + L+N L + C+GL LLL I +
Sbjct: 65 KVYSIGVNLHGIQNNNNIIDLSIKNKGILHLENLDLIFKEIFNVFHCNGL-LLLYGSITD 123
Query: 115 SLNTVKLVLWNPFTKR---YKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHK 171
++++LV+ NP+ + KR+ + + FD GYD + HK
Sbjct: 124 --DSIRLVVCNPYWGKREWVKRINN----------------FASFDKLAFGYDKSCGCHK 165
Query: 172 VVRILYEKPKEVWIYSLRSDSWRKVEDW---CQIALGVMGMFVNGVMYFEGENLEN---- 224
++R+ P + IY+LRS+S R V + IA G+ + G Y+ ++ +
Sbjct: 166 ILRVFDSYPNRLEIYNLRSNS-RMVSSFPLKWDIAFMQDGVSLKGNTYWYAKDRRSEDCY 224
Query: 225 IVSFDFATEKFSI-MPFPEGY--EKSCSHLRVLEGRLCLCT---LGRHRTLDIYVGDKHE 278
++ FDF E+F +P P+ + E S V E +L + G +DI+V +K E
Sbjct: 225 LICFDFTRERFGPRLPLPQPFIDEFLGSLYVVREEKLAVLVKRWRGGKSEIDIWVTNKIE 284
Query: 279 -DGLTWSKLIKIPDYQTHTDHIRNLRPLCYSREGDKILLIEERDDFVWYDLNKKTTESIQ 337
D ++WSK +K+ + P + EG L+ +E V++ NK+ TE ++
Sbjct: 285 PDEVSWSKFLKVDN-----------TPRFFLTEG--YLIYDEEKVVVFF--NKEETEGLK 329
Query: 338 TVCDI 342
+ I
Sbjct: 330 STVHI 334
>AT2G40910.1 | Symbols: | F-box protein-related |
chr2:17069938-17071554 REVERSE
Length = 449
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 36/254 (14%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKA---HLNRSIETNTHKKLILF 59
+PP+++++I ++LP K ++RF+C+SK S I F + + R + + H L+
Sbjct: 69 IPPDLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCNSLFTSVTRKKQPHIHMCLVDH 128
Query: 60 GHTKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTV 119
G + +S D V D SL G FL L ++
Sbjct: 129 GGQRVLLSLSSTSP----DNTCYVVDQDLSLTG--------MGGFFLNLVRGLLCFSVRE 176
Query: 120 KLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVV------ 173
K ++NP T+ +RLT P ++S + ++ RY+ +G+D + +K+V
Sbjct: 177 KACIYNPTTR--QRLTLPAIKSDIIALKDERKDIRYY----IGHDPVNDQYKLVCTIGIS 230
Query: 174 -RILYEKPKEVWIYSLRS-DSWRKV---EDWCQIALGVMGMFVNG--VMYFEGENLEN-- 224
E W++ L + SWRKV E + A +G F+NG V Y +++
Sbjct: 231 SAFFTNLKSEHWVFVLEAGGSWRKVRTLESYHPHAPSTVGQFINGSVVYYMAWLDMDTCA 290
Query: 225 IVSFDFATEKFSIM 238
+VSFD +E+ + +
Sbjct: 291 VVSFDITSEELTTI 304
>AT2G40910.2 | Symbols: | F-box protein-related |
chr2:17069938-17071501 REVERSE
Length = 442
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 36/254 (14%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKA---HLNRSIETNTHKKLILF 59
+PP+++++I ++LP K ++RF+C+SK S I F + + R + + H L+
Sbjct: 62 IPPDLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCNSLFTSVTRKKQPHIHMCLVDH 121
Query: 60 GHTKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTV 119
G + +S D V D SL G FL L ++
Sbjct: 122 GGQRVLLSLSSTSP----DNTCYVVDQDLSLTG--------MGGFFLNLVRGLLCFSVRE 169
Query: 120 KLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVV------ 173
K ++NP T+ +RLT P ++S + ++ RY+ +G+D + +K+V
Sbjct: 170 KACIYNPTTR--QRLTLPAIKSDIIALKDERKDIRYY----IGHDPVNDQYKLVCTIGIS 223
Query: 174 -RILYEKPKEVWIYSLRS-DSWRKV---EDWCQIALGVMGMFVNG--VMYFEGENLEN-- 224
E W++ L + SWRKV E + A +G F+NG V Y +++
Sbjct: 224 SAFFTNLKSEHWVFVLEAGGSWRKVRTLESYHPHAPSTVGQFINGSVVYYMAWLDMDTCA 283
Query: 225 IVSFDFATEKFSIM 238
+VSFD +E+ + +
Sbjct: 284 VVSFDITSEELTTI 297
>AT3G17570.1 | Symbols: | F-box family protein |
chr3:6009413-6010558 FORWARD
Length = 381
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 39/247 (15%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
LP ++ +I ++P L + + K + D +F+K H+ R+ +++I
Sbjct: 5 LPRDLETEILSRVPATSLQKLKPTCKRWYTLFKDPEFLKKHVGRA-----EREVISLMSL 59
Query: 63 KT---STVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTV 119
+ S +SGI++ G+ S+K + + S I C+GL L + +
Sbjct: 60 RVYSLSVNLSGIHSSVEMTGMLNSLKDSEDV---KISDITECNGLLLC-------TTDDS 109
Query: 120 KLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYD---AARNDHKVVRI- 175
+LV+WNP+T + + P +S+S Y + F LGYD +R +K++R
Sbjct: 110 RLVVWNPYTGETRWI---PYKSNS--------PYEMYQKFVLGYDNTNKSRYSYKILRCY 158
Query: 176 --LYEKPKEVWIYSLRSDSWRKVEDWC-QIALGVMGMFVNGVMYFEGENLEN---IVSFD 229
L + E IY S SWR+ D + G+ + G Y+ + E I+ FD
Sbjct: 159 HGLIDFGYEFEIYEFNSHSWRRFYDNSPNCSFESKGVTLKGNTYWFASDTEGRHIILRFD 218
Query: 230 FATEKFS 236
FATE+F
Sbjct: 219 FATERFG 225
>AT3G17490.1 | Symbols: | F-box family protein |
chr3:5984827-5985993 FORWARD
Length = 388
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 126/300 (42%), Gaps = 39/300 (13%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
L +++ +I ++P L R R K + +D F K H +++ +T L F
Sbjct: 6 LSEDLVEEILSRVPAISLKRLRYTCKQWNALFNDQRFSKKHRDKAPKTYLGLTLKDFRIY 65
Query: 63 KTSTVISGIY---AVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTV 119
S+ + G+ +DL K + N LN S I C GL L R
Sbjct: 66 SMSSNLHGLLHNNNIDLLMEFKGKLSSLNDLNDFEISQIYPCDGLILCSTKR------NT 119
Query: 120 KLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAAR----NDHKVVRI 175
+LV+WNP T + + + ++ + R D+F GYD ++ N++K++R+
Sbjct: 120 RLVVWNPCTGQTRWI--------------KRRNRRMCDTFAFGYDNSKSSCLNNYKILRV 165
Query: 176 LYEKPK----EVWIYSLRSDSWRKVEDWCQIALGVMGMFVNGVMYFEGENLEN---IVSF 228
EK K E I+ S+SWR ++ + + V G Y+ + I F
Sbjct: 166 C-EKIKGQQFEYEIFEFSSNSWRVLDVNPNCIIEGRSVSVKGNSYWFATITKTHYFIRRF 224
Query: 229 DFATEKFSIMPFP---EGYEKSCSHLRVLEGRLCLCTLG-RHRTLDIYVGDKHEDGLTWS 284
DF++E F +P P Y S + E +L + +DI+V +K ++ WS
Sbjct: 225 DFSSETFQKLPLPFHIFDYNDSRALSAFREEQLSVLHQSFDTEKMDIWVTNKIDETTDWS 284
>AT3G16210.1 | Symbols: | F-box family protein |
chr3:5494533-5495615 REVERSE
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 126/297 (42%), Gaps = 42/297 (14%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
LP E+ ++I ++L +K L RFRC+ K+ I+D F + + + S K + +
Sbjct: 5 LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMS----PAKFVSFYDKN 60
Query: 63 KTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKLV 122
+ G + V + K LD S+ V+ C L + +L L+
Sbjct: 61 FYMLDVEGKHPVITN---KLDFPLDQSMIDESTCVLHCDGTLCV--------TLKNHTLM 109
Query: 123 LWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYE-KPK 181
+WNPF+K++K + +P + S + G GYD +D+KVV +
Sbjct: 110 VWNPFSKQFKIVPNPGIYQDS-------------NILGFGYDPVHDDYKVVTFIDRLDVS 156
Query: 182 EVWIYSLRSDSWRK-----VEDWCQIALGVMGMFVNGVMY---FEGENLENIVSFDFATE 233
++ R+ SW + DW G F++ +Y + I+ F+ +T
Sbjct: 157 TAHVFEFRTGSWGESLRISYPDWH--YRDRRGTFLDQYLYWIAYRSSADRFILCFNLSTH 214
Query: 234 KFSIMPFPEGYEK-SCSHLRVLEGRLCLCTLGRHRTLDIYVGDKHEDGLTWSKLIKI 289
++ +P P + + S L V +LC+ + +I + + G +WSK+I +
Sbjct: 215 EYRKLPLPVYNQGVTSSWLGVTSQKLCITEYEMCKK-EIRISVMEKTG-SWSKIISL 269
>AT2G31470.1 | Symbols: | F-box family protein |
chr2:13407492-13408655 REVERSE
Length = 387
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 43/255 (16%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRS-------IETNTHKK 55
+P +++++IF + PVK + R RC+SK S + F + +L +S H++
Sbjct: 25 IPIDLVIEIFSRSPVKSIARCRCVSKLWASILRLPYFTELYLTKSCARPRLLFACQKHRE 84
Query: 56 LILFGHTKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINS 115
L F + + S L S + + GRF++I GL + +I+
Sbjct: 85 LFFFSTPQPHN------PNESSSPLAASFHMKIPFD-GRFNIISPIGGLVFVRYEQILKG 137
Query: 116 LNTVKLV--LWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVV 173
T + V + NP T + L P R + + GYD KV+
Sbjct: 138 RKTPEFVSAICNPSTGQSLTLPKPKTRK------------RIWGTSHFGYDPIEKQFKVL 185
Query: 174 RI-----LYEKPKEVWIYSLRSD--SWRKVEDWCQIALGVMGMFVNGVMYFEGE-----N 221
+ +Y KE ++ +L ++ SWR++E G G+ +NGV+Y+ +
Sbjct: 186 SMNIGDGVY---KEHYVLTLGTENLSWRRIECSIPHVHGSKGICINGVLYYRAKADMFSG 242
Query: 222 LENIVSFDFATEKFS 236
IV FD EKFS
Sbjct: 243 TLMIVCFDVRFEKFS 257
>AT5G42460.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT2G17830.1); Has
799 Blast hits to 768 proteins in 36 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 797;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr5:16979773-16980939 FORWARD
Length = 388
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 139/333 (41%), Gaps = 55/333 (16%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
LP +++ +I ++P+ L R K D F+K + + + K I
Sbjct: 7 LPRDLLAEILSRVPLTSLRAVRLTCKKWNDLSKDRSFLKKQIVETKKKQLESKEIEVIMM 66
Query: 63 KTSTVISGIYAVDLSDGLKES-------VKLDNSLNHGRF---SVIDCCSGLFLLLEPRI 112
+ V + ++D+ + + S + L + NH + S + C GL L + +
Sbjct: 67 RNFRVY--LTSIDIHNNVDPSFTPKGTLISLSDDANHHQVDNVSRVFHCDGLLLCITKDL 124
Query: 113 INSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKV 172
+LV+WNP+ + R P + SY D++ LGYD +N HK+
Sbjct: 125 -----HYRLVVWNPYFGQ-TRWIQP------------RNSYHRKDNYALGYDEKKN-HKI 165
Query: 173 VRIL--YEKPKE----VWIYSLRSDSWRKV----EDWCQIALGVMGMFVNGVMYFEGE-- 220
+R+ Y P+E +YS S+SW+ V DW I G+ + G Y+
Sbjct: 166 LRLKDNYYAPRERICEFELYSFESNSWKVVLDVSPDW-YIPSYNRGLSLKGNTYWYATEK 224
Query: 221 --NLENIVSFDFATEKFSI-MPFP------EGYEKSCSHLRVLEGRLCLCTLGRHR-TLD 270
N++ ++ FDF TEKF +P P YE + V E +L + + ++
Sbjct: 225 HVNVDFLICFDFTTEKFGPRLPLPFNATESPTYEDVVTLSSVGEEQLAVLFQSEYTLMME 284
Query: 271 IYVGDKHEDG-LTWSKLIKIPDYQTHTDHIRNL 302
I+V K E + W+KL D + H + L
Sbjct: 285 IWVTSKVESTEVLWNKLFLEVDLIAISSHFQFL 317
>AT1G25055.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G25211.1); Has 745
Blast hits to 722 proteins in 30 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr1:8806649-8807950 FORWARD
Length = 433
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 54/246 (21%)
Query: 78 DGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKLVLWNPFTKRYKRLTDP 137
D + S+K + LN S + C GL L + + + ++V+WNP+ + R P
Sbjct: 98 DTMDLSIKQVDLLNQVEISRVYHCDGLLLCV------AKDNSRVVVWNPYLGQ-TRWIRP 150
Query: 138 PVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEKPKEVW---IYSLRSDSWR 194
ES+ DS+ LGYD RN HK++R++ + V+ IY LRS+SWR
Sbjct: 151 RTESN------------IGDSYALGYDINRN-HKILRMVQTRNVSVYRYEIYDLRSNSWR 197
Query: 195 KVEDWCQIALG----VMGMFVNGVMYF-------EGE--------NLEN-IVSFDFATEK 234
+E + + G+ V G YF GE +LE+ ++ FDF TE
Sbjct: 198 VLEVTPNGEMDPNHPLYGVSVKGNTYFFAHEDSSSGEIDEDGDIIDLEDFLLCFDFTTET 257
Query: 235 FSI---MPFPEGYEKSCS-------HLRVLEGRLCLCTLGRHRTLDIYVGDKHE-DGLTW 283
F + +PF + + + L VL L + R T++ +V E + ++W
Sbjct: 258 FGLRLPLPFHSTIDATVTLSCVRDQQLAVLYHNEGLHSDDRFTTVEFWVTTSIEPNSVSW 317
Query: 284 SKLIKI 289
SK + +
Sbjct: 318 SKFLTV 323
>AT1G24881.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G25211.1); Has 745
Blast hits to 722 proteins in 30 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr1:8784120-8785421 FORWARD
Length = 433
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 54/246 (21%)
Query: 78 DGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKLVLWNPFTKRYKRLTDP 137
D + S+K + LN S + C GL L + + + ++V+WNP+ + R P
Sbjct: 98 DTMDLSIKQVDLLNQVEISRVYHCDGLLLCV------AKDNSRVVVWNPYLGQ-TRWIRP 150
Query: 138 PVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEKPKEVW---IYSLRSDSWR 194
ES+ DS+ LGYD RN HK++R++ + V+ IY LRS+SWR
Sbjct: 151 RTESN------------IGDSYALGYDINRN-HKILRMVQTRNVSVYRYEIYDLRSNSWR 197
Query: 195 KVEDWCQIALG----VMGMFVNGVMYF-------EGE--------NLEN-IVSFDFATEK 234
+E + + G+ V G YF GE +LE+ ++ FDF TE
Sbjct: 198 VLEVTPNGEMDPNHPLYGVSVKGNTYFFAHEDSSSGEIDEDGDIIDLEDFLLCFDFTTET 257
Query: 235 FSI---MPFPEGYEKSCS-------HLRVLEGRLCLCTLGRHRTLDIYVGDKHE-DGLTW 283
F + +PF + + + L VL L + R T++ +V E + ++W
Sbjct: 258 FGLRLPLPFHSTIDATVTLSCVRDQQLAVLYHNEGLHSDDRFTTVEFWVTTSIEPNSVSW 317
Query: 284 SKLIKI 289
SK + +
Sbjct: 318 SKFLTV 323
>AT1G25211.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G25055.1); Has 745
Blast hits to 722 proteins in 30 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr1:8835405-8836706 FORWARD
Length = 433
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 54/246 (21%)
Query: 78 DGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKLVLWNPFTKRYKRLTDP 137
D + S+K + LN S + C GL L + + + ++V+WNP+ + R P
Sbjct: 98 DTMDLSIKQVDLLNQVEISRVYHCDGLLLCV------AKDNSRVVVWNPYLGQ-TRWIRP 150
Query: 138 PVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEKPKEVW---IYSLRSDSWR 194
ES+ DS+ LGYD RN HK++R++ + V+ IY LRS+SWR
Sbjct: 151 RTESN------------IGDSYALGYDINRN-HKILRMVQTRNVSVYRYEIYDLRSNSWR 197
Query: 195 KVEDWCQIALG----VMGMFVNGVMYF-------EGE--------NLEN-IVSFDFATEK 234
+E + + G+ V G YF GE +LE+ ++ FDF TE
Sbjct: 198 VLEVTPNGEMDPNHPLYGVSVKGNTYFFAHEDSSSGEIDEDGDIIDLEDFLLCFDFTTET 257
Query: 235 FSI---MPFPEGYEKSCS-------HLRVLEGRLCLCTLGRHRTLDIYVGDKHE-DGLTW 283
F + +PF + + + L VL L + R T++ +V E + ++W
Sbjct: 258 FGLRLPLPFHSTIDATVTLSCVRDQQLAVLYHNEGLHSDDRFTTVEFWVTTSIEPNSVSW 317
Query: 284 SKLIKI 289
SK + +
Sbjct: 318 SKFLTV 323
>AT1G24800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G25211.1); Has 745
Blast hits to 722 proteins in 30 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr1:8769741-8771042 FORWARD
Length = 433
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 54/246 (21%)
Query: 78 DGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKLVLWNPFTKRYKRLTDP 137
D + S+K + LN S + C GL L + + + ++V+WNP+ + R P
Sbjct: 98 DTMDLSIKQVDLLNQVEISRVYHCDGLLLCV------AKDNSRVVVWNPYLGQ-TRWIRP 150
Query: 138 PVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEKPKEVW---IYSLRSDSWR 194
ES+ DS+ LGYD RN HK++R++ + V+ IY LRS+SWR
Sbjct: 151 RTESN------------IGDSYALGYDINRN-HKILRMVQTRNVSVYRYEIYDLRSNSWR 197
Query: 195 KVEDWCQIALG----VMGMFVNGVMYF-------EGE--------NLEN-IVSFDFATEK 234
+E + + G+ V G YF GE +LE+ ++ FDF TE
Sbjct: 198 VLEVTPNGEMDPNHPLYGVSVKGNTYFFAHEDSSSGEIDEDGDIIDLEDFLLCFDFTTET 257
Query: 235 FSI---MPFPEGYEKSCS-------HLRVLEGRLCLCTLGRHRTLDIYVGDKHE-DGLTW 283
F + +PF + + + L VL L + R T++ +V E + ++W
Sbjct: 258 FGLRLPLPFHSTIDATVTLSCVRDQQLAVLYHNEGLHSDDRFTTVEFWVTTSIEPNSVSW 317
Query: 284 SKLIKI 289
SK + +
Sbjct: 318 SKFLTV 323
>AT1G47390.1 | Symbols: | F-box family protein |
chr1:17379544-17380656 FORWARD
Length = 370
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 53/279 (18%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
LP E+I +I ++P + L+RFR +SK + DD FI N HK F
Sbjct: 7 LPCELIEEILSRVPPESLVRFRTVSKKWNALFDDKMFI----------NNHKMTFRF--- 53
Query: 63 KTSTVISGIYAVDLSDGLK-ESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKL 121
S Y+V ++ ++ + LD + ++ C+G L + +
Sbjct: 54 -ILATESKFYSVSMTPKIEVRELSLDIPGLELKPKILIDCNGFLLC-------GMEKEGI 105
Query: 122 VLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEKPK 181
V+WNP+ ++ K + P V S+ F+ G YD + + + L P
Sbjct: 106 VVWNPWLRQAKWI-KPKVNQPSLC----------FNGIGYEYDNMKLESSGYKTLVSYPN 154
Query: 182 E------VW-IYSLRSDSWR--KVEDWCQIALGVMGMFV--NGVMYFEGENLEN-----I 225
E VW I+ S+SW+ + C + + G V NG++Y+ +L+N +
Sbjct: 155 ELDPTRSVWKIHDFASNSWKYTNLVMSCSSGVTLFGASVSLNGILYWVASHLKNNSLFVL 214
Query: 226 VSFDFATE---KFSIMPFPEGYEKSCSHLRVL-EGRLCL 260
V ++F+ E KFS +P E + LR+ E RL L
Sbjct: 215 VYYNFSNEKVYKFSDLPCGENHHHDVLVLRIFREDRLSL 253
>AT3G25460.1 | Symbols: | F-box family protein |
chr3:9231581-9232666 REVERSE
Length = 361
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 132/306 (43%), Gaps = 42/306 (13%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLIL---- 58
LP +++V+I ++P L R R K +D F H +++ + LIL
Sbjct: 6 LPEDLLVEILCRVPATSLKRLRSTCKLWNHLYNDKRFKSKHCHKA----PRQSLILMWKN 61
Query: 59 FGHTKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNT 118
FG + S + + ++++ L + +SL R S + SGL L + IN+
Sbjct: 62 FGFSSISINLQRVSPIEVTGEL-NLIDHHSSLGMFRNSPLCQTSGLLLCVNVEKINT--- 117
Query: 119 VKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLG-YDAARNDHKVVRILY 177
+LV+WNP T + K + Q Y ++ LG Y ++D+ +IL
Sbjct: 118 -RLVVWNPCTGKTKWI--------------QHRRMGYICNYALGSYQDKKSDNNSYKILS 162
Query: 178 EK---PKEVWIYSLRSDSWRKVEDWCQIALGVMGMFVNGVMYFEGENLEN------IVSF 228
+E IY + S+SWR ++ +L + + + G Y+ + + ++ F
Sbjct: 163 HGIYGGQEFEIYEINSNSWRILDVTVDSSLYIENVSLKGKTYWFATDGNDKPCDLFLICF 222
Query: 229 DFATEKFS--IMPFPEGYEKSCSHLRVLEGRL-CLCTLGRHRTLDIYVGDKHEDG--LTW 283
D+ TE+F +P+ Y ++ S V E +L L I+V +K + L+W
Sbjct: 223 DYTTERFERLCLPYQIPYFRNTSLSVVKEEKLSVLLQPSLTSKTQIWVTNKIGEAKVLSW 282
Query: 284 SKLIKI 289
K + +
Sbjct: 283 IKFLTV 288
>AT5G51000.1 | Symbols: | F-box family protein |
chr5:20742533-20743669 REVERSE
Length = 378
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 135/300 (45%), Gaps = 27/300 (9%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
L P+++ +I ++P+ L + K DS F K H + + ++I+
Sbjct: 7 LFPDLVEEILSRVPITSLKAVKLTCKQWNDLSKDSSFTKNHYGKEAK---EIQVIMICDL 63
Query: 63 KTSTVISGIYA-VDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKL 121
K + ++ DL+D S+K LN + C GL LL + N + KL
Sbjct: 64 KACLMSVNLHNHKDLAD---PSIKQIGKLNQVEIDSVFHCDGLLLL---LLCNPKDNSKL 117
Query: 122 VLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEKPK 181
++WNP+ + + + P +S +P ++++R F +GYD + N+HK++ +
Sbjct: 118 MVWNPYLGQTRWIQ--PRNNSHKHRPAGRFNHRPAGRFYMGYD-SNNNHKIL-WFSSMYR 173
Query: 182 EVWIYSLRSDSWRKVE---DWCQIALGVMGMFVNGVMYFEGENLEN----IVSFDFATEK 234
E IY +SD+W ++ D I + + + G +YF ++ ++SFDF E+
Sbjct: 174 EYEIYDFKSDAWTVIDVNTDQDHI-IDNQRVSLKGNVYFIAHDILKEEAFLLSFDFTCER 232
Query: 235 FS---IMPFPEGYEKSCSHLRVLEGRLC-LCTLGRHRTLDIYVGDKHEDGLT-WSKLIKI 289
F +PF +E + V E +L L + I++ K E + WSK +K+
Sbjct: 233 FGPSLPLPFHCCHEDTVLLSTVREEQLAVLFQKSDAYEMGIWITTKIELNIVLWSKFLKV 292
>AT3G16740.1 | Symbols: | F-box family protein |
chr3:5699476-5700651 FORWARD
Length = 391
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 158/399 (39%), Gaps = 70/399 (17%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
LP ++ ++ ++PV + R K + D F K HL + K+ F
Sbjct: 7 LPRDLTEEVLSRIPVTSMRAVRFTCKKWNTLSKDRSFTKKHLRGARAAAKKKQTKEFQVI 66
Query: 63 KTSTVISGIYAVDLSDGLKESVKLDNSL---NHGRFSVIDCCSGLFLLLEPRIINSLNTV 119
+Y+V+L + E + SL +H S I C GL L + I
Sbjct: 67 MMIQFRVYLYSVNLLNPSIERIGKLISLDVEDHVDISKIFHCGGLLLCITKDI------S 120
Query: 120 KLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRIL--- 176
+LV+WNP++ + + KP + SY D + LGY+ + +IL
Sbjct: 121 RLVVWNPYSGQ-----------TRWIKP--RNSYHRLDRYALGYEEKNKSCRCYKILRFM 167
Query: 177 --YEKP------KEVWIYSLRSDSWRKVE---DWCQIALGVMGMFVNGVMY-FEGENL-- 222
YE +E IY L SDSW+ V DW + G+ + G Y F E L
Sbjct: 168 DDYEDDRALRLIREFEIYDLNSDSWKVVNVTPDW-DVEFYHRGLSLKGNTYWFAQEKLPP 226
Query: 223 -------------ENIVSFDFATEKFS---IMPFPEGYEKSCSHLRVLEGRLCL----CT 262
+ ++ FDF E+F +PF E + + V + +L + C+
Sbjct: 227 LPRGRVITISDMADFLLCFDFTRERFGPRLPLPFHSFVEDTVTLSSVRDKKLAVLFQPCS 286
Query: 263 LGRHRTLDIYVGDKHE-DGLTWSKLIKIPDYQTHTDHIRNLRPLC-YSREGDKILLIEER 320
T+ I++ K E + ++W K+ D ++ T ++ + E K+ ++ ++
Sbjct: 287 AS---TVKIWISRKIEPNAVSWRKVFLAVDMKSLTGFQFDINAASFFVDEKKKVAMVLDK 343
Query: 321 DDFVWYDLNKKTTESIQTVCDIKKHYRLKFFNLSNNTTC 359
D F + K T +I + K ++ S ++C
Sbjct: 344 DRFSY-----KFTRNIAYIIGKKGYFEKVDLGESTVSSC 377
>AT3G21170.1 | Symbols: | F-box family protein |
chr3:7419976-7421160 FORWARD
Length = 394
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 145/367 (39%), Gaps = 80/367 (21%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
LP +++V+I ++P L R R SK + I D K H + + + L+L H
Sbjct: 6 LPEDLVVEILSRVPAVFLARLRSTSKRWNTLIKDGKLSKKHSSNAPRHSM--ALVLIDH- 62
Query: 63 KTSTVISGIYAVDLSDGLKESV----KLDNSLNHGRFSVIDC-----CSGLFLLLEPRII 113
K +V S + + S ++ L L++ + +D C GL L
Sbjct: 63 KVYSVRSNLRGIHNSVAPYVNITCHFSLKEHLSNNYSTEVDIGHVFHCDGLLLC------ 116
Query: 114 NSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVV 173
+ +LV+WNP + R P ++ Y+ D + LG + N +K++
Sbjct: 117 -TTKDYRLVVWNPLSGE-TRWIQP------------RFCYKKDDCYALGRSSC-NKYKIL 161
Query: 174 R--------------------ILYEKPKEVW---IYSLRSDSWRKVEDWCQIALGVM--- 207
R ++ +E + IY S+SWR + + G+
Sbjct: 162 RQGRLINPSEERYVYNIVGEDLVINNSQERYEYEIYDFNSNSWRSI----GVITGLFNPN 217
Query: 208 ---GMFVNGVMYFEGENLENIVSFDFATEKFSIMPFPEGYEKSCSHLRVLEGRLCLC--- 261
G+ VNG+ Y+ + + ++SFDF+TE+F PEG + RLC+
Sbjct: 218 ITSGVSVNGITYWFDISEQFLLSFDFSTERFGSESLPEGDSHLALSVTRQGKRLCMLSTN 277
Query: 262 -TLGRHRTLDIYVGDKHED---GLTWSKLIKIPDYQTHTDHIRNLRPLCYSREGDKILLI 317
T +++++ K + ++WSK P + LR C+ REG
Sbjct: 278 YTYVTGTNVNLWIATKTSENTRAMSWSKF---PILRGGV----GLRYRCHFREGVSFFAY 330
Query: 318 EERDDFV 324
+ ++ V
Sbjct: 331 QVKEKIV 337
>AT3G49520.1 | Symbols: | F-box family protein |
chr3:18359584-18360750 FORWARD
Length = 388
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 133/320 (41%), Gaps = 58/320 (18%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
LP +++ +IF +P L R K+ + + F K +S+ N +L++
Sbjct: 7 LPYDLVKEIFSWVPFTSLRAVRSTCKTWNALSKNQIFGK----KSVARNQFLELMILDSR 62
Query: 63 KTS-----TVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLN 117
S I DL D + + + N+ + S + C GL L + P+ +
Sbjct: 63 VCSLRFDLQKIRNEDEEDLVDPSMKQISIPNNDDQVEISRVYHCDGLLLCI-PK-----D 116
Query: 118 TVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILY 177
L+LWNP+ + KR+ +P + ++ DSF LGY+ +HK++R+
Sbjct: 117 NSSLMLWNPYLGQTKRI-----------RP--KNTFHRDDSFALGYN--NRNHKILRLNE 161
Query: 178 EKPKEVWIYSLRSDSWRKVED---WCQIALGVMGMFVNGVMYF-------EGE------- 220
E + +Y SDSWR V D + + G+ + G YF E E
Sbjct: 162 ENESHIDVYDFSSDSWRTVPDDNPYRDELIYQSGVSLKGNAYFFDREVTTEAEVGTEDLL 221
Query: 221 --NLENIVS-FDFATEKFS-------IMPFPEGYEKSCSHLRVLEGRLCLCTLGRHRTLD 270
+E+ + FDF TE+F I+P P + S R + + ++
Sbjct: 222 ITGIEDYLRCFDFTTERFGPRLPLPFILPSPSFEYLALSWARDDKLAVLYSHYDTFDIIE 281
Query: 271 IYVGDKHE-DGLTWSKLIKI 289
I++ K E + ++WS +K+
Sbjct: 282 IWISTKIEPNAVSWSTFLKV 301
>AT3G22421.1 | Symbols: | F-box family protein |
chr3:7949116-7950396 REVERSE
Length = 426
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 53/323 (16%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
LP E++ +I ++P+K R K+ S + F+K + ++I+
Sbjct: 8 LPTELLDEIISRVPLKSTRAVRLTCKNWDSLFKNRSFMKEE---AAAKEGESRMIVLMDK 64
Query: 63 KTSTVISGIYAVDLSDGLKESVKL----DNSLNHGRFSVIDCCSGLFL-LLEPRIINSLN 117
+ +D+ ++ KL D+S + S + C GL L +LE +
Sbjct: 65 NLFAMSIFFNGIDIDPSAEQRGKLTCLYDDS-EQVKISQVFHCEGLLLCVLED------D 117
Query: 118 TVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRIL- 176
LV+WNP+ + R +P F +Q RY + LGY+ HK++R +
Sbjct: 118 KCSLVVWNPYWGQ-TRWIEP-----RYFSRIQNCYGRYMYVYALGYNNKSRSHKILRFID 171
Query: 177 --YEKPKEVWIYSLRSDSWRKVEDWCQ--IALGVMGMFVNGVMYFEGE------------ 220
++ P IY SD W ++ Q I G + GV +G
Sbjct: 172 GAFDFPFWYEIYDFDSDLWTTLDVTPQWFINFPPRGCYNRGVT-LKGNTYWCAIRRKSNT 230
Query: 221 ----NLENIVSFDFATEKFS-IMPFP-----EGYEKSCSHLRVLEGRLCLCTLGRHRTLD 270
+L++I+ FDF +E+F +MP P G + S +R + + C + T++
Sbjct: 231 NWFVDLDHIICFDFTSERFGPLMPLPFVRYTSGSLVTLSCVREEKLAVLFCN---NATVE 287
Query: 271 IYVGDKHE-DGLTWSKLIKIPDY 292
+++ K E D ++WSK + + Y
Sbjct: 288 VWITTKIETDKISWSKFLTVNMY 310
>AT4G05080.1 | Symbols: | F-box family protein |
chr4:2603001-2604176 FORWARD
Length = 391
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 127/303 (41%), Gaps = 51/303 (16%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
L +++ +I ++P+ L R K + D KA + H+ +L +
Sbjct: 7 LTQDLVKEILSRVPITSLGAVRSTCKGWNALSKDRILCKAKPKQQF----HQGFMLSDYR 62
Query: 63 KTSTV--ISGIYAVDLSDGLKESVK-LDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTV 119
S ISG + + + + SVK + N LN S + C G+ L +
Sbjct: 63 LRSMRFNISGTFKENGEEFVNLSVKEIGNFLNKVEISHMYYCGGILLCVT-------TDT 115
Query: 120 KLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEK 179
+LV+WNP+ + + +Q + + +F L YD +N HK++R L K
Sbjct: 116 RLVIWNPYLGQ--------------IRWIQLKTETMYSTFCLRYDNNKN-HKILRFLDNK 160
Query: 180 PKEVWIYSLRSDSWRK---VEDWCQIALGVMGMFVNGVMYF----EGENLENIVSFDFAT 232
IY L+S SWR + W I V G YF E NL ++ FDF
Sbjct: 161 QGSYEIYDLKSYSWRAFDVIPKW-DIDDDGQSASVKGNTYFRTIDETPNL--LICFDFTA 217
Query: 233 EKFSIM---PFPEGYEKSCSHLRVLEGRLCLCTLGRH---RTLDIYVGDKHE-DGLTWSK 285
E+F + PF G+ S S +R + L L +H ++I++ K E + L+W+
Sbjct: 218 ERFGKLLDPPFQHGW-MSLSWVREEK----LVALYQHLDTSMIEIWITTKIEPNALSWTS 272
Query: 286 LIK 288
+K
Sbjct: 273 FLK 275
>AT5G62660.1 | Symbols: | F-box family protein |
chr5:25156326-25157465 REVERSE
Length = 379
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 36/258 (13%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLN-RSIETNTHKKLILFGH 61
+P +++++I KLP K L+RF+C+SK S I F +L ++ + L H
Sbjct: 41 IPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPRRPPRLYMSLVDH 100
Query: 62 TKTSTVISGIYAVDLSDGLKESVKLDNSLN------HGRFSVIDCCSGLFLLLEPRIINS 115
++++ Y + S N GR V+ GL L + R +
Sbjct: 101 LLCNSLMVCHYPCESVLLSSSSSAESLEQNLTIAGMGGRNMVV--LRGLILYVVCRTAS- 157
Query: 116 LNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVV-- 173
++NP T+ + +T P V+S+ + + S YF GYD + +KVV
Sbjct: 158 -------IYNPTTR--QSVTLPAVKSNILAQKSHWNSLLYF----FGYDPVLDQYKVVCT 204
Query: 174 -----RILYEKPKEVWIYSLR-SDSWRKVEDWCQIALGV-MGMFVNGVMYFEGENLEN-- 224
+ L E W++ L SW+++E + Q L +G+ VNGV+Y+ +
Sbjct: 205 VALFSKRLKRITSEHWVFVLEPGGSWKRIE-FDQPHLPTRLGLCVNGVIYYLASTWKRRD 263
Query: 225 -IVSFDFATEKFSIMPFP 241
+VSFD +E+FS++ P
Sbjct: 264 IVVSFDVRSEEFSMIQGP 281
>AT2G43440.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G43445.1); Has 740
Blast hits to 736 proteins in 32 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 738;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr2:18039326-18040599 FORWARD
Length = 401
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 115/295 (38%), Gaps = 35/295 (11%)
Query: 5 PEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHTKT 64
PE++ DIFL+LP+K +L+F+ +S+ S ++ F++ R H + IL +
Sbjct: 15 PELLEDIFLRLPLKSILKFKTVSRQWRSILESKLFVE----RRGNLQKHHRKILAAYNCN 70
Query: 65 STVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKLVLW 124
+ I+ +G +E V L + C GL + EP N L
Sbjct: 71 YFMRPSIFPESRFEGDEEIVYLHCDAAQPSMT----CDGLLCITEPGWFNVL-------- 118
Query: 125 NPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEKPKEVW 184
NP + +R Q ++ G G D +K+VR+ + E
Sbjct: 119 NPSAGQLRRFP-----PGPGPVKGPQENWL----LGFGRDNVTGRYKIVRMCFHDCYEFG 169
Query: 185 IYSLRSDSWRKVEDWCQIAL-GVMGMFVNGVMYFEGENLENIV-SFDFATEKF-SIMPFP 241
I + + W K+ L G + VNG +Y+ + I+ + D E + + P
Sbjct: 170 ILDIETGVWSKLRSPPHNMLPGSKSVCVNGSIYWLQISAGYIILAMDLHEESYHGVHHLP 229
Query: 242 EGYEKSCSHLRVLEGRLCLC---TLGRHRTLDIYV----GDKHEDGLTWSKLIKI 289
+ + L LE RL + +G L+I+ G G +WSK I
Sbjct: 230 ATWVTQETQLVNLEDRLAMAMTTNVGPEWILEIWSMDIEGKGWSKGYSWSKSYSI 284
>AT3G49510.1 | Symbols: | F-box family protein |
chr3:18353891-18356508 FORWARD
Length = 662
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 48/258 (18%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
L +++ DI ++P L+ R K + + F + R N + ++
Sbjct: 7 LSDDLVGDILSRVPFTSLISVRSTCKKWNALSKNQIFGRKTAAR----NQFLEFMILDSR 62
Query: 63 KTSTVI--SGIYAVDLSDGLKESVKL---DNSLNHGRFSVIDCCSGLFLLLEPRIINSLN 117
S + GI D D + S+KL ++ + S + C GL L + N
Sbjct: 63 VCSLRLDLQGIRNEDKEDFVDPSMKLISIPSNDDQVEISQVYHCDGLLLCIAKENSN--- 119
Query: 118 TVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILY 177
+ +WNP+ + K + +P + ++ +D F LGYD RN HK++R LY
Sbjct: 120 ---VFVWNPYLGQTKWI-----------RP--RNTFHRYDRFALGYDNNRN-HKILRFLY 162
Query: 178 EKPKE-------VWIYSLRSDSWR--KVEDWCQIALGVMGMFVNGVMYFEGENLEN---- 224
++ + +Y SDSWR V C I G+ + G YF G+ +
Sbjct: 163 DEESNESSRRTHIDVYDFSSDSWRVLDVNPDCDIPFYQTGVSLKGNTYFFGQEVTQATKV 222
Query: 225 ------IVSFDFATEKFS 236
++ FDF TE+F
Sbjct: 223 TEIETCLLCFDFTTERFG 240
>AT1G11620.1 | Symbols: | F-box family protein |
chr1:3910833-3911924 FORWARD
Length = 363
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 108/263 (41%), Gaps = 48/263 (18%)
Query: 1 MSLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNR--------SIETNT 52
M L +++ +I ++P + L+R R K + I + F+ HL+ ++ N
Sbjct: 4 MDLSSDLVEEILSRVPARSLVRLRSTCKQWEALIAEPRFVNKHLSHMRYREQQFTVFNNE 63
Query: 53 HKKLILFGHTKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRI 112
H LFG T TS V +D + VKL + I C GL L + +
Sbjct: 64 HIVSPLFGST-TSYV-----GIDFNKPENCGVKLPFPIALSPAINISHCDGLLLYVTKSM 117
Query: 113 INSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGY----DAARN 168
L++ NP + + + SM D++GLGY +
Sbjct: 118 --------LLVANPLLSQKRWIKCSEGFDHSM------------DAYGLGYLFNQSSGFY 157
Query: 169 DHKVVRIL--YEKPKEVWIYSLRSDSWRKVED---WCQIALGVMGMFVNGVMYFEGEN-- 221
D+KVVR + V +Y+ +SDSW+ V D L + + + G Y+ G N
Sbjct: 158 DYKVVRFRCGIKNSSRVEVYAFKSDSWKVVVDTNFGGFDGLPLSSVCLRGTPYWLGYNKS 217
Query: 222 ---LENIVSFDFATEKFSIMPFP 241
L +I SFDF+ E+F + P
Sbjct: 218 GNELMSIQSFDFSKERFEPLFLP 240
>AT1G54550.1 | Symbols: | F-box family protein |
chr1:20369689-20370777 FORWARD
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 32/226 (14%)
Query: 3 LPPEIIVDIFLKLPVKPL--LRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFG 60
LP +++ +IF ++P+ L +R C + S D A N+ +E +
Sbjct: 7 LPDDLVREIFSRVPLTSLRAVRSTCKKWNAISKYDILGKKAAAKNQFLEFMVTDSRVCSL 66
Query: 61 HTKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVK 120
+ S +DLS + + + N ++ S + C GL L + +
Sbjct: 67 RLDLQGIRSEEDLIDLS---IKQISIPNKVDQVEISQVYHCDGLLLCIAK------DNSS 117
Query: 121 LVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYE-K 179
+++WNP+ + K L P K L +Y D F LGYD RN HK++R LYE
Sbjct: 118 VMVWNPYLGQTK-LIQPR-------KKLHRY-----DKFALGYDNNRN-HKILRFLYEGS 163
Query: 180 PKEVWI--YSLRSDSWRKVE---DWCQIALGVMGMFVNGVMYFEGE 220
P+ V I Y SDSWR ++ DW ++ + + G YF G
Sbjct: 164 PRNVIIDVYDFSSDSWRVLDIDIDWHEL-FSHNSVSLKGNTYFFGR 208
>AT3G20030.1 | Symbols: | F-box family protein |
chr3:6990254-6991462 FORWARD
Length = 402
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 108/267 (40%), Gaps = 52/267 (19%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLIL---- 58
L +++ +I ++P L R K + D KA R KK L
Sbjct: 7 LSQDLLEEILSRVPRTSLGAVRSTCKRWNTLFKDRILCKAEETRDQFRFIMKKYKLCSMR 66
Query: 59 FGHTKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNT 118
F T G VD S +KE L + N + S + C GL L + +
Sbjct: 67 FDLNGTLNEDGGTEFVDPS--IKE---LGHFFNQVKISKVFQCDGLLL-----CVTKEDN 116
Query: 119 VKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILY- 177
++LV+WNP+ + + +ES + +YR FD + +GYD R HK++R L
Sbjct: 117 IRLVVWNPYLGQIRW-----IESGNT-------NYRLFDRYAIGYDNNRK-HKILRFLEY 163
Query: 178 ------EKPKEVWIYSLRSDSWRKVE---DWCQIALGVMGMFVNGVMYF----------E 218
+ E IY S+SWR ++ W +I G + G YF +
Sbjct: 164 YNFNMKHRFLEYEIYDFSSNSWRVLDIAPRW-EIESYQRGASLKGNTYFIAKEKIEYEED 222
Query: 219 GENLE---NIVSFDFATEKFS-IMPFP 241
GE E N++ FDF TE F +P P
Sbjct: 223 GEFPEPADNLLCFDFTTESFGQFLPLP 249
>AT2G40925.1 | Symbols: | F-box family protein |
chr2:17074905-17076116 REVERSE
Length = 403
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 37/256 (14%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
+PP+++++I ++LP K +RF+C+SK I F NR T ++
Sbjct: 27 IPPDLMIEILIRLPTKSFMRFKCVSKQWSPLISGRYFC----NRLFTCVTRQQ------Q 76
Query: 63 KTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVID---CCSGLFLLLEPRIINSLNTV 119
+ + + A D L S DN+ F ++D G F P ++
Sbjct: 77 QQPRLYMCLVAKDKQCVLLSSTSPDNTC----FVLVDQDLSIPGYFFASVPGLLCFQFGT 132
Query: 120 KLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVV------ 173
K ++NP TK+ LT P V+S + Q + +Y+ +G D + +K+V
Sbjct: 133 KACIYNPSTKQL--LTLPSVKSDITAQQGQLKTTQYY----IGRDPVNDQYKLVCTILIY 186
Query: 174 -RILYEKPKEVWIYSLR-SDSWRKV---EDWCQIALGVMGMFVNGVM-YFEGENLEN--I 225
++ E W+++L SW+KV ++ A G ++GV+ Y +L +
Sbjct: 187 SKLFANMSSEHWVFTLELGGSWKKVVPLGNYHPHAPATAGRSIDGVVHYLAWVDLYKCAV 246
Query: 226 VSFDFATEKFSIMPFP 241
VSF+ +E+ + P
Sbjct: 247 VSFNIRSEEVTTFLLP 262
>AT1G51290.1 | Symbols: | F-box family protein (FBX10) |
chr1:19012173-19013306 FORWARD
Length = 377
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 44/248 (17%)
Query: 1 MSLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFG 60
++LP E++ +I ++P + L RFR + K S DD+ F+ HL RS + +
Sbjct: 4 VNLPWELVEEILYRVPPQSLARFRTVCKQWNSLFDDNKFVNDHLVRS-----RPQFMFRT 58
Query: 61 HTKTSTV---ISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLN 117
+K +V SG + +++ + + L+ + ++ +DC LF S
Sbjct: 59 DSKMYSVAVNFSGPW-IEVHELTLDIPGLNCEMPIWLYNYVDCDGLLF-------CTSYK 110
Query: 118 TVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILY 177
+++WNP+ K+ + +F Y +Y +GYD + +KV+ +
Sbjct: 111 FKGVLIWNPWLKQ-----------TRLFASNHHYPTKYV----IGYDNKKR-YKVLDYEF 154
Query: 178 EKPKEVWIYSLRSDSWRKVED------WCQIALGVMGMFVNGVMYFEGENLEN---IVSF 228
E ++ IY + S +KV+D W + + + NG +Y+ G ++ N I SF
Sbjct: 155 EPSSKLTIYEIGLYS-KKVKDLESDSSWSVVQSNSVSL--NGTLYWAGVDVNNGIFIRSF 211
Query: 229 DFATEKFS 236
F+TE+ +
Sbjct: 212 SFSTERLT 219
>AT1G71320.1 | Symbols: | S locus F-box-related / SLF-related |
chr1:26882485-26883818 FORWARD
Length = 392
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 132/330 (40%), Gaps = 50/330 (15%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
+P +I IF LP+K L RF+ LSK S I+ + F L R+ + K +
Sbjct: 14 IPDDIAEGIFHHLPIKSLARFKVLSKKWTSMIESTYFSHKRLIRTGLPTPNMKFLHISQH 73
Query: 63 KTSTVISGIYAVDLSDGLKESVKLDNSLNHGRF--------SVIDCCSGLFLLLEPRIIN 114
T+ + Y+ ++ L E+ D+ N F V+ C GL LL RI +
Sbjct: 74 FTANFVEE-YSNSIT-FLLETFSRDDQNNRKTFDESQNKTIQVLGSCDGLVLL---RIHD 128
Query: 115 SLNTVKLVLWNPFTKRYKRLTDPPVE---------SSSMFKPLQQYSYRYFDS------- 158
++ L+ NP TK + +L+ ++ + KP +Q S D
Sbjct: 129 DFRSIYLI--NPTTKEHMKLSPEFMQWPFTLSYLTPAMANKPWRQLSQSVLDYDISVKRM 186
Query: 159 ---FGLGYDAARNDHKVVRI-----LYEKPKEVWIYSLRSDSWRKVEDW----CQIALGV 206
G G D + +KVV I +++ + + SL + R V + C
Sbjct: 187 PSLAGFGKDIVKKSYKVVLIYTRYEIHDHEFKAKVLSLDNGEQRDVGFYDIHHCIFCDEQ 246
Query: 207 MGMFVNGVMYF-----EGENLENIVSFDFATEKFSIMPFPEGYEKSCSHLRV--LEGRLC 259
++ NG +++ + +++ D TE+F + PE K +++ + L RLC
Sbjct: 247 TSVYANGSLFWLTLKKLSQTSYQLLAIDLHTEEFRWILLPECDTKYATNIEMWNLNERLC 306
Query: 260 LCTLGRHRTLDIYVGDKHEDGLTWSKLIKI 289
L + L ++ + W K+ I
Sbjct: 307 LSDVLESSNLVVWSLHQEYPTEKWEKIYSI 336
>AT5G62510.1 | Symbols: | F-box family protein |
chr5:25095373-25096635 REVERSE
Length = 420
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 25/252 (9%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLI-LFGH 61
+P +++++I +LP K L+RF+C+SK S I F +L + H+ I L H
Sbjct: 44 IPLDLLIEILTRLPHKSLMRFKCVSKQWSSLIRSRFFSNRYLTVASPLRPHRLYISLVDH 103
Query: 62 TKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKL 121
S + + D L + + GL ++ +I + K
Sbjct: 104 KCDSREVCHSPRESVLLSFSSPSSFDQDL-----TTMQGMGGLHMVTLRGLILYIVCGKA 158
Query: 122 VLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVV-------- 173
L+NP T++ L P ++F ++S YF LG+D + +KVV
Sbjct: 159 CLYNPTTRQSVTL---PAIKFNIFVQGNEHSLLYF----LGHDPVLDQYKVVCTFVSSSS 211
Query: 174 RILYEKPKEVWIYSLR-SDSWRKVEDWCQIALGVMGMFVNGVMY---FEGENLENIVSFD 229
+ L E W++ L SW+++E G+ + GV+Y F + +V+FD
Sbjct: 212 QDLETIISEHWVFVLEVGGSWKRIEFDQPHTPTRSGLCIGGVIYYLAFTSMFQDIVVTFD 271
Query: 230 FATEKFSIMPFP 241
+E+F+I+ P
Sbjct: 272 VRSEEFNIIQAP 283
>AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483829
FORWARD
Length = 334
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 121/303 (39%), Gaps = 49/303 (16%)
Query: 1 MSLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLIL-- 58
+ +P EI+ +I ++LPVK L RF+ +SK + I F K H+ ++E + KL+
Sbjct: 37 IHIPNEIVEEILVRLPVKSLTRFQTVSKHWRTLITSKYFGKRHM--ALEKSKGCKLLFVC 94
Query: 59 --FGHTKTSTVISGIYAVD---LSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRII 113
F T+ A++ +S+G +++ + + G + + C GL +
Sbjct: 95 DDFVDRAEDTLFLKTVALEKTSVSEGDEQAFEFEGY--KGFLDISESCDGLVCFYD---- 148
Query: 114 NSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFD-------------SFG 160
T + + NP T + L ++ ++KP + G
Sbjct: 149 ---TTRAVEVMNPATTMFIELPLSRIQQLCIYKPNPEVELEPVQDPNPVLDPVMTCSQIG 205
Query: 161 LGYDAARNDHKVVRILYEKPK---EVWIYSLRSDSWRKVE----DWCQIALGVMGMFVNG 213
+G D+ +K+V + P + L WR V D QI +F NG
Sbjct: 206 VGKDSVSGSYKLVWMYNTSPATPPTCEVLDLDGKKWRFVNTTSLDHHQILCDQRPVFANG 265
Query: 214 VMYFEGENLEN-------IVSFDFATEKFSIMPFPEGYEKSCSHLRV----LEGRLCLCT 262
+Y+ + E ++ D TE F ++ P + S ++ L+GRLC+
Sbjct: 266 SLYWLTGDEEGYATTQTKLIVLDLHTEMFQVIQTPPFITRDASGDKIGLCNLDGRLCISE 325
Query: 263 LGR 265
L +
Sbjct: 326 LKK 328
>AT3G22940.1 | Symbols: | F-box family protein-related |
chr3:8131468-8132706 FORWARD
Length = 412
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 106/265 (40%), Gaps = 56/265 (21%)
Query: 10 DIFLKLPVKPLLRFRCLSKSMCSTIDDSDFI-KAHLNRSIET--------NTHKKLILFG 60
+I +LP+K R K S + FI KA R E+ N H FG
Sbjct: 5 EILSRLPLKSTRAVRSTCKKWDSLFKNRSFISKAAAAREGESQMVVLMDHNLHLVSFFFG 64
Query: 61 HTKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVK 120
+ TS I G D E VK+ + C GL L I +
Sbjct: 65 -SDTSVEIKGKRICLNDDSDSEQVKISQVFH---------CEGLLL-----CILKDDNFS 109
Query: 121 LVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRIL---Y 177
LV+WNP+ + R P S P YRY +GYD R +HK++R + +
Sbjct: 110 LVVWNPYWGQ-TRWIKP---RCSFEIPQGCDMYRY----AIGYDNKRRNHKILRFIDYEF 161
Query: 178 EKPKE---VW--IYSLRSDSWRKVE----DWCQIALGVMGMFVNGVMYFEGE-------- 220
P++ +W IY SD W ++ W I G G+ + G Y+ +
Sbjct: 162 HYPRDNVVLWYEIYDFESDLWTTLDVTTPHWL-INCGNRGVTLKGNTYWCAKKRNSDLFL 220
Query: 221 NLENIVSFDFATEKFS---IMPFPE 242
N ++I+ FDF +E+F ++PF +
Sbjct: 221 NADHIICFDFTSERFGPLLLLPFSD 245
>AT1G70380.1 | Symbols: | F-box family protein |
chr1:26526212-26527345 REVERSE
Length = 377
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 142/327 (43%), Gaps = 53/327 (16%)
Query: 2 SLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGH 61
+L ++ ++I +LP+K L+R C+SK S I DF A+L RS+ + L +
Sbjct: 8 TLALDMQIEILARLPLKYLMRCMCVSKKWASLIRGEDFRSAYLLRSMA--RPRLLFVASR 65
Query: 62 TKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEPRIINSLNTVKL 121
++ T + ++V L S K ++ V + + LL + N+ ++
Sbjct: 66 SRKFTRETCFHSVYQEPPLLLSGKRQMLTDNHIAPVFTVSNPILGLLCHQGYNN----EI 121
Query: 122 VLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILY---- 177
V+ NP K+++ L V + S R F GYD KV+ +
Sbjct: 122 VICNPGLKKFRNLPQIQVPEGA--------SVRSF----FGYDKVDKVFKVLCVCVPQTQ 169
Query: 178 -------EKPKEVWIYSLRSDS-----WRKVEDWCQIALGVM---GMFVNGVMYFEGE-- 220
++PK+ +Y++RSD WR + C V+ G+F G +Y+
Sbjct: 170 FGAGWTSKEPKKYQVYTVRSDHEKPSFWRPII--CNDDHSVVTDEGLFNGGFLYYGARSS 227
Query: 221 -NLENIVSFDFATEKFSIMPFPEGYEKSCSHLRVL--EGRLCLCT-----LGRHRTLDIY 272
N ++ F+ ++E F+++ PE + H R++ +G++ L + +I+
Sbjct: 228 CNKPMVMRFNVSSEAFAVIKLPEEVDID-YHWRLVNYKGKVALVNTFDSKFKFNGVFEIW 286
Query: 273 VGDKHEDGLTWSK-LIKIPDYQTHTDH 298
V ++E W K +IKIP + D+
Sbjct: 287 V--RNEVDRKWDKDIIKIPQWTESVDN 311
>AT1G30790.1 | Symbols: | F-box family protein |
chr1:10932713-10933912 FORWARD
Length = 399
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 62/320 (19%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIK--------------AHLNRSI 48
+P ++ V+I +LP K L++F+C+SK S I + FI A N S
Sbjct: 9 IPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRFIVAFSNGSF 68
Query: 49 ETNTHKKLILFGHTKTSTVISGIYAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLL 108
++ K+L +F + S +L D S+ + N+L SV +G
Sbjct: 69 PSDKEKRLFIFSSSHEGHESSSSVITNL-DTTIPSLTVSNNLASRCISV----NGF---- 119
Query: 109 EPRIINSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARN 168
I SL T + + NP T++ L P+ S ++ S +GYD +
Sbjct: 120 ---IACSLYT-RFTICNPSTRQVIVL---PILPSGRAPDMR--------STCIGYDPVDD 164
Query: 169 DHKVVRILY------EKPKEVWIYSLRSD----SWRKVEDWCQI---ALGVMGMFVNGVM 215
K + ++ + E + +L+ D SWR+++ I + M + +NGV+
Sbjct: 165 QFKALALISSCIPNKDSTVEHLVLTLKGDKKNYSWRQIQGNNNIPPYSPVTMRVCINGVV 224
Query: 216 YFEGENLEN-----IVSFDFATEKFSIMPFPEGYEKSCSHLRVLEGRLCLCTLGRHR--- 267
Y+ IV FD +EK + + P+ + C+ ++E + L ++ R+R
Sbjct: 225 YYGAWTPRQSMNAVIVCFDVRSEKITFIKTPKDVVRWCNDSILMEYKGKLASIVRNRYSR 284
Query: 268 --TLDIYVGDKHEDGLTWSK 285
T D++V + E WSK
Sbjct: 285 FDTFDLWVLEDIEKQ-EWSK 303
>AT4G19940.1 | Symbols: | F-box family protein |
chr4:10806195-10807430 FORWARD
Length = 411
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 153/366 (41%), Gaps = 47/366 (12%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFGHT 62
+P +++++I +LP K L+RF+ +SK S I +F L S L ++
Sbjct: 35 IPFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRNFTNRLLKLSSPPRLFMCLSSSDNS 94
Query: 63 KTSTVISGIYAVDLSDGLKESVKLDNSL---NHGRFSVIDCCSGLFLLLEPRIINSLNTV 119
TV+ + + SD S +D L + + GL L++ NT
Sbjct: 95 HLKTVLLSLSSPPDSDITMSSSVIDQDLTMPGMKGYQISHVFRGLMCLVKKSSAQIYNT- 153
Query: 120 KLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDHKVVRILYEK 179
T R + + P +E S++ +++ + + +G+D + +KVV I+
Sbjct: 154 --------TTR-QLVVLPDIEESTILA--EEHKSKKI-MYHIGHDPVYDQYKVVCIVSRA 201
Query: 180 PKEV---------WIYSLRSDS---WRKVEDWCQ----IALGVMGMFVNGVMYFEG---- 219
EV W+ L + WRK+ C+ + LG G+ ++G M++
Sbjct: 202 SDEVEEYTFLSEHWVLLLEGEGSRRWRKIS--CKYPPHVPLG-QGLTLSGRMHYLAWVRV 258
Query: 220 ENLENIVSFDFATEKFSIMPFPEGYEKSCSHLRVLEGRLCLCTLGR---HRTLDIYVGDK 276
+ +V FD +E+FS++ P + L G++ + + ++++V +
Sbjct: 259 SDNRVLVIFDTHSEEFSMLQVPGDIFWKYNGLLEYGGKIAILNYTKVDIEGVMELWVVED 318
Query: 277 HEDGLTWSKLIKIPDYQTH-TDHIRNLRPLCYSREGDKILLIEERDDFVW----YDLNKK 331
E L SK++ + Q + I +L L +R G+ IL+ D V+ YDL K
Sbjct: 319 EEKNLWSSKILVVNPLQLQMVNSIISLTVLGTTRNGEVILVPGPEDKTVFNILLYDLQKN 378
Query: 332 TTESIQ 337
I+
Sbjct: 379 HIRKIE 384
>AT3G47150.1 | Symbols: | F-box family protein |
chr3:17358591-17359765 FORWARD
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 3 LPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILF 59
+P ++ ++I L+LPVK LLRFRC+SK CS I DF H N + + + LI F
Sbjct: 12 IPLDLQINILLRLPVKSLLRFRCVSKLWCSIITSHDFRNRHFNITSSSAPPRLLIAF 68
>AT5G18160.1 | Symbols: | F-box family protein |
chr5:6002770-6003909 FORWARD
Length = 379
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 114/279 (40%), Gaps = 56/279 (20%)
Query: 2 SLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNT--------- 52
S+P +I ++I +LP K ++R R +SK S +FIK +RS +T+
Sbjct: 33 SIPLDITIEILSRLPAKSIVRSRSVSKLWSSITTTPEFIK---HRSKKTSPPCVLLIFRK 89
Query: 53 HKKLILFGHTKTSTVISGI--YAVDLSDGLKESVKLDNSLNHGRFSVIDCCSGLFLLLEP 110
H KLI+F + S + Y +++ +G +D GL L
Sbjct: 90 HDKLIVFSSPQHQNTYSHVQDYHIEIP-------------KNGFIRRLDSVHGLICL--- 133
Query: 111 RIINSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARNDH 170
+ +LV+ NP KR+ L +P Q Y LGY+ +
Sbjct: 134 -----EGSKQLVICNPTLKRFFPLPEP-----------QGTGDEYNVGGFLGYEPIEGKY 177
Query: 171 KVVRILYEKPKEVWIYSLRSDSWRKVE-DWCQIALGVMGMFVNGVMYFEGENLEN----- 224
K + I+ +V ++ +SWR + + G +NGV+Y++ +
Sbjct: 178 KALCIVRGWNTQVLTLEIQ-ESWRVTKPGYTHWPTKDTGRCINGVIYYKAIIFDRVPRHV 236
Query: 225 IVSFDFATEKFSIMPFP-EGYEKSCSHLRVLEGRLCLCT 262
I FD E+F+ + FP Y++ + EGRL L +
Sbjct: 237 IFGFDLRYEEFTHIEFPMRNYDRFL--MVSYEGRLALIS 273
>AT3G19470.2 | Symbols: | F-box family protein |
chr3:6749766-6750914 FORWARD
Length = 382
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 101 CSGLFLLLEPRIINSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFG 160
C GL L I + + +LV+WNP+ + RL +P + F YSY
Sbjct: 115 CDGLLLC----ISITESKTRLVVWNPYWG-HTRLFEP----THQFNKFDSYSY------A 159
Query: 161 LGYDAARNDHKVVR-ILYEKPKEVWIYSLRSDSWRKVEDWCQIALGVM--GMFVNGVMY- 216
LGYD +R HK++R I P + IY SD WR ++ + L M G+ + G Y
Sbjct: 160 LGYDKSRKSHKILRGITCLDPFK--IYDFNSDLWRDLDVTPEWHLWQMLHGVSLKGNAYW 217
Query: 217 FEGENLEN--------IVSFDFATEKFS-IMPFPEGYEKSCSHLRVLEGR----LCLCTL 263
F EN ++ FDF +E F +P P + S + V R + L
Sbjct: 218 FARENYTETMDTDHFFLLCFDFTSETFGPPLPLPFEFAVSEDTMSVSSVREEQLVVLYQP 277
Query: 264 GRHRTLDIYVGDKHE-DGLTWS 284
+ LDI+V K E + ++W+
Sbjct: 278 WDYLQLDIWVTSKIEPNAVSWN 299
>AT3G51171.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G16555.1); Has
537 Blast hits to 535 proteins in 15 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 537;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:19010856-19011626 FORWARD
Length = 256
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 110/273 (40%), Gaps = 68/273 (24%)
Query: 1 MSLPPEIIVDIFLKLPVKPLLRFRCLSKSMCSTIDDSDFIKAHLNRSIETNTHKKLILFG 60
+ LP E+ DI +L + L+RFR + K D+ FIK H R+ + I
Sbjct: 2 VPLPWELEEDILSRLAAQSLVRFRSVCKRWNYLFDEKSFIKNHFARAC-----PQFIFMT 56
Query: 61 HTKTSTVISGIYAVDLS--DGLKESVKLDNSLNHG--------RFSVIDCCSGLFLLLEP 110
S IY++++ DG+ ++KL + G + I C G
Sbjct: 57 D-------SNIYSIEIIGLDGVDPTIKLRVLDSSGIPYRDWKFAYITITACDGFLF---- 105
Query: 111 RIINSLNTVK-LVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFGLGYDAARND 169
NS + K WNP+ K+ K + +Y + F+ GLGYD R D
Sbjct: 106 --CNSWASPKGTAFWNPWLKQVKWI---------------EYEDKGFNVCGLGYDNTR-D 147
Query: 170 HKVVRIL------------YEKPKEVWIYSLRSDSWRKVE----DWCQIALGVMGMFVNG 213
KV +IL Y + V IY S +++ +E DW + + +NG
Sbjct: 148 GKVYKILGYLMCRPEDGSSYVYHQRVAIYDCASHAFKFIEISNKDWFLTDVTRFSVSLNG 207
Query: 214 VMYFEG--ENLEN--IVSFDFATE---KFSIMP 239
+Y+ N ++ I FDF+ E F ++P
Sbjct: 208 NLYWLSPIPNTDDFLIQCFDFSREICKPFCLLP 240
>AT3G19470.1 | Symbols: | F-box family protein |
chr3:6749766-6750914 FORWARD
Length = 382
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 101 CSGLFLLLEPRIINSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFG 160
C GL L I + + +LV+WNP+ + RL +P + F YSY
Sbjct: 115 CDGLLLC----ISITESKTRLVVWNPYWG-HTRLFEP----THQFNKFDSYSY------A 159
Query: 161 LGYDAARNDHKVVR-ILYEKPKEVWIYSLRSDSWRKVEDWCQIALGVM--GMFVNGVMY- 216
LGYD +R HK++R I P + IY SD WR ++ + L M G+ + G Y
Sbjct: 160 LGYDKSRKSHKILRGITCLDPFK--IYDFNSDLWRDLDVTPEWHLWQMLHGVSLKGNAYW 217
Query: 217 FEGENLEN--------IVSFDFATEKFS-IMPFPEGYEKSCSHLRVLEGR----LCLCTL 263
F EN ++ FDF +E F +P P + S + V R + L
Sbjct: 218 FARENYTETMDTDHFFLLCFDFTSETFGPPLPLPFEFAVSEDTMSVSSVREEQLVVLYQP 277
Query: 264 GRHRTLDIYVGDKHE-DGLTWS 284
+ LDI+V K E + ++W+
Sbjct: 278 WDYLQLDIWVTSKIEPNAVSWN 299
>AT3G22770.1 | Symbols: | F-box family protein-related |
chr3:8047684-8048667 REVERSE
Length = 327
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 31/173 (17%)
Query: 101 CSGLFLLLEPRIINSLNTVKLVLWNPFTKRYKRLTDPPVESSSMFKPLQQYSYRYFDSFG 160
C GL L + I T +LV+WNP+ + +E + F YSY
Sbjct: 55 CDGLLLCIS---ITQAKT-RLVVWNPYWGHTRS-----IEPTHQFNKFDSYSY------A 99
Query: 161 LGYDAARNDHKVVR-ILYEKP--KEVWIYSLRSDSWRKVE---DW------CQIALGVMG 208
LGYD + HK++R I +P E IY S+SWR DW ++L
Sbjct: 100 LGYDKSSKSHKILRCITCLRPHFHEFIIYDFNSNSWRVFHVTPDWQLGTINSGVSLKGNA 159
Query: 209 MFVNGVMYFEGENLEN---IVSFDFATEKFS-IMPFPEGYEKSCSHLRVLEGR 257
+V Y+E ++SFDF E F ++P P + +S L V R
Sbjct: 160 FWVAEEKYYETSETNEEFFLLSFDFTRETFGPLLPLPFQFVESEDALSVSNVR 212