Jatropha Genome Database

JcCA0286161.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0286161.30 - phase: 0 /partial
         (209 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G27450.2 | Symbols: MVK, MK | MK (MEVALONATE KINASE); mevalon...   232   1e-61
AT5G27450.1 | Symbols: MVK, MK | MK (MEVALONATE KINASE); mevalon...   232   1e-61

>AT5G27450.2 | Symbols: MVK, MK | MK (MEVALONATE KINASE); mevalonate
           kinase | chr5:9691051-9692975 FORWARD
          Length = 378

 Score =  232 bits (591), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 121/212 (57%), Positives = 146/212 (68%), Gaps = 5/212 (2%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTYVTLSFP--TSENDGTLKLQLKDMAL 58
           MEVKARAPGKIIL+GEHAVVHGSTAVA++I+LYTYVTL FP  ++EN+  L LQLKD++L
Sbjct: 1   MEVKARAPGKIILAGEHAVVHGSTAVAAAIDLYTYVTLRFPLPSAENNDRLTLQLKDISL 60

Query: 59  EFSWPIGKIKEALP-NLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFL 117
           EFSW + +IKEA+P +      STP SCS E++KSI+ LVEEQN+P+ K+ L+SGI+ FL
Sbjct: 61  EFSWSLARIKEAIPYDSSTLCRSTPASCSEETLKSIAVLVEEQNLPKEKMWLSSGISTFL 120

Query: 118 WLYTSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFG 177
           WLYT I GF PATVV+ S+                                   GW    
Sbjct: 121 WLYTRIIGFNPATVVINSELPYGSGLGSSAALCVALTAALLASSISEKTRG--NGWSSLD 178

Query: 178 ESELELLNKWAFEGEKLIHGKPSGIDNTVSTY 209
           E+ LELLNKWAFEGEK+IHGKPSGIDNTVS Y
Sbjct: 179 ETNLELLNKWAFEGEKIIHGKPSGIDNTVSAY 210


>AT5G27450.1 | Symbols: MVK, MK | MK (MEVALONATE KINASE); mevalonate
           kinase | chr5:9691051-9692975 FORWARD
          Length = 378

 Score =  232 bits (591), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 121/212 (57%), Positives = 146/212 (68%), Gaps = 5/212 (2%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTYVTLSFP--TSENDGTLKLQLKDMAL 58
           MEVKARAPGKIIL+GEHAVVHGSTAVA++I+LYTYVTL FP  ++EN+  L LQLKD++L
Sbjct: 1   MEVKARAPGKIILAGEHAVVHGSTAVAAAIDLYTYVTLRFPLPSAENNDRLTLQLKDISL 60

Query: 59  EFSWPIGKIKEALP-NLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFL 117
           EFSW + +IKEA+P +      STP SCS E++KSI+ LVEEQN+P+ K+ L+SGI+ FL
Sbjct: 61  EFSWSLARIKEAIPYDSSTLCRSTPASCSEETLKSIAVLVEEQNLPKEKMWLSSGISTFL 120

Query: 118 WLYTSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFG 177
           WLYT I GF PATVV+ S+                                   GW    
Sbjct: 121 WLYTRIIGFNPATVVINSELPYGSGLGSSAALCVALTAALLASSISEKTRG--NGWSSLD 178

Query: 178 ESELELLNKWAFEGEKLIHGKPSGIDNTVSTY 209
           E+ LELLNKWAFEGEK+IHGKPSGIDNTVS Y
Sbjct: 179 ETNLELLNKWAFEGEKIIHGKPSGIDNTVSAY 210