Jatropha Genome Database

JcCA0284281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0284281.10 + phase: 0 /partial
         (156 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22400.1 | Symbols: LOX5 | LOX5; electron carrier/ iron ion b...   154   2e-38
AT1G55020.1 | Symbols: LOX1 | LOX1; lipoxygenase | chr1:20525798...   149   6e-37
AT1G17420.1 | Symbols: LOX3 | LOX3; electron carrier/ iron ion b...    59   1e-09
AT1G72520.1 | Symbols:  | lipoxygenase, putative | chr1:27308611...    58   2e-09

>AT3G22400.1 | Symbols: LOX5 | LOX5; electron carrier/ iron ion
           binding / lipoxygenase/ metal ion binding /
           oxidoreductase, acting on single donors with
           incorporation of molecular oxygen, incorporation of two
           atoms of oxygen | chr3:7927011-7931167 FORWARD
          Length = 886

 Score =  154 bits (389), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 70/116 (60%), Positives = 88/116 (75%), Gaps = 1/116 (0%)

Query: 36  KIKGKVVLMKKNVLDFNDVTASCFDRIHELFGKGVSIQLISAVNPDPENDLRGKHGKVAF 95
           KI+G+VV+MKKN+LDF DV AS  DR++EL G+ VS+ LIS+  PDP N+ RG+ GK A 
Sbjct: 34  KIEGEVVVMKKNLLDFKDVMASLLDRVNELLGRRVSLHLISSHQPDPANEKRGRLGKAAH 93

Query: 96  LESWVKKI-TPMAAQETEFNITFDWDESMAVPGAFIIRNHHHSQLYLKTVTLEDVP 150
           LE WV KI T + A+ET F +TFDWDESM  P AF+I+NHHHSQ YLK++TL   P
Sbjct: 94  LEKWVTKIKTSVTAEETAFGVTFDWDESMGPPAAFVIKNHHHSQFYLKSLTLRGFP 149


>AT1G55020.1 | Symbols: LOX1 | LOX1; lipoxygenase |
           chr1:20525798-20530143 FORWARD
          Length = 859

 Score =  149 bits (377), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 86/121 (71%)

Query: 36  KIKGKVVLMKKNVLDFNDVTASCFDRIHELFGKGVSIQLISAVNPDPENDLRGKHGKVAF 95
           K+KG VVLMKKNVLDFND  AS  DR+HE  G  ++++L+S+   D EN  +GK GK A 
Sbjct: 20  KVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSENGSKGKLGKAAH 79

Query: 96  LESWVKKITPMAAQETEFNITFDWDESMAVPGAFIIRNHHHSQLYLKTVTLEDVPGHGRV 155
           LE W+  IT + A E+ F +TFD++     PGAF+IRN H S+  LK++TLEDVPGHGRV
Sbjct: 80  LEDWITTITSLTAGESAFKVTFDYETDFGYPGAFLIRNSHFSEFLLKSLTLEDVPGHGRV 139

Query: 156 H 156
           H
Sbjct: 140 H 140


>AT1G17420.1 | Symbols: LOX3 | LOX3; electron carrier/ iron ion
           binding / lipoxygenase/ metal ion binding /
           oxidoreductase, acting on single donors with
           incorporation of molecular oxygen, incorporation of two
           atoms of oxygen | chr1:5977512-5981384 FORWARD
          Length = 919

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 3/124 (2%)

Query: 24  KTKAKGMAEERFKIKGKVVLMKKNVLDFNDVTASCFDRIHELFGKGVSIQLISAVNPDPE 83
           K++ +  A  +FK++  V +  KN  D  +      D   +  G+ + ++LIS    DP+
Sbjct: 73  KSEEEEKAAVKFKVRAVVTVRNKNKEDLKETLVKHLDAFADKIGRNIVLELIST-QLDPK 131

Query: 84  NDLRGKHGKVAFLESWVKKITPMAAQETEFNITFDWDESMAVPGAFIIRNHHHSQLYLKT 143
             L  K    A L+ W KK +   A+   +   F  D +   PGA  + N H  + +L++
Sbjct: 132 TKLP-KKSNAAVLKDWSKK-SKTKAERVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLES 189

Query: 144 VTLE 147
           +T+E
Sbjct: 190 ITIE 193


>AT1G72520.1 | Symbols:  | lipoxygenase, putative |
           chr1:27308611-27312589 FORWARD
          Length = 926

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 3/114 (2%)

Query: 34  RFKIKGKVVLMKKNVLDFNDVTASCFDRIHELFGKGVSIQLISAVNPDPENDLRGKHGKV 93
           +FK++    +  KN  DF +      D   +  G+ V ++L+S    DP+ +   K  K 
Sbjct: 89  KFKVRAVATVRNKNKEDFKETLVKHLDAFTDKIGRNVVLELMST-QVDPKTN-EPKKSKA 146

Query: 94  AFLESWVKKITPMAAQETEFNITFDWDESMAVPGAFIIRNHHHSQLYLKTVTLE 147
           A L+ W KK +   A+   +   F  D +   PGA  + N H  + +L+++T+E
Sbjct: 147 AVLKDWSKK-SNSKAERVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIE 199