Jatropha Genome Database

JcCA0282441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0282441.10 + phase: 2 /pseudo/partial
         (279 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G65590.1 | Symbols: HEXO3, ATHEX1 | HEXO3 (BETA-HEXOSAMINIDAS...   346   1e-95
AT3G55260.1 | Symbols: HEXO1, ATHEX2 | HEXO1 (BETA-HEXOSAMINIDAS...   241   3e-64
AT1G05590.1 | Symbols: HEXO2, ATHEX3 | HEXO2 (BETA-HEXOSAMINIDAS...    71   7e-13

>AT1G65590.1 | Symbols: HEXO3, ATHEX1 | HEXO3 (BETA-HEXOSAMINIDASE
           3); beta-N-acetylhexosaminidase/ hexosaminidase |
           chr1:24385996-24390989 FORWARD
          Length = 535

 Score =  346 bits (887), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 166/254 (65%), Positives = 189/254 (74%), Gaps = 23/254 (9%)

Query: 1   GKGYPSLWPSKDCKQPLDVSNEFTFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTS 60
           GKGYP+LWPSK+C++PLDVS++FTFKVIDGILSDFS        HLGGDEV+T+CWS+T 
Sbjct: 280 GKGYPALWPSKNCQEPLDVSSDFTFKVIDGILSDFSKIFKFKFVHLGGDEVNTTCWSATP 339

Query: 61  RIQKWLEKHGMNASQAYQYFVLRAQKIALSHGYEIINWEETFNNFGNKLSRKTVVHNXAD 120
           RI +WL+KH M+  +AYQYFVLRAQKIALSHGYEIINWEETF NFG+KL+RKTVVHN   
Sbjct: 340 RIAQWLKKHRMSEKEAYQYFVLRAQKIALSHGYEIINWEETFINFGSKLNRKTVVHN--- 396

Query: 121 PLTDHREIHYLVCSAYNFPCRLXXXXXXXXXXXXLRCIVSNQDKWYLDHLDTSWEKFYMN 180
                                L            LRCIVSNQ+ WYLDH+D  W+ FY N
Sbjct: 397 --------------------WLNTGLVENVTASGLRCIVSNQEFWYLDHIDAPWQGFYAN 436

Query: 181 EPLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTIWPRAAAAAERLWTPYDKLAKDPTH 240
           EP  NI D +QQ LV+GGEVCMWGE +D SDIEQTIWPRAAAAAERLWTPY KLAK+P +
Sbjct: 437 EPFQNITDKKQQSLVLGGEVCMWGEHIDASDIEQTIWPRAAAAAERLWTPYAKLAKNPNN 496

Query: 241 VTRRLAHFRCLLNQ 254
           VT RLAHFRCLLNQ
Sbjct: 497 VTTRLAHFRCLLNQ 510


>AT3G55260.1 | Symbols: HEXO1, ATHEX2 | HEXO1 (BETA-HEXOSAMINIDASE
           1); beta-N-acetylhexosaminidase/ hexosaminidase/
           hydrolase, hydrolyzing O-glycosyl compounds |
           chr3:20489317-20492858 FORWARD
          Length = 541

 Score =  241 bits (616), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 122/255 (47%), Positives = 154/255 (60%), Gaps = 25/255 (9%)

Query: 1   GKGYPSLWPSKDCKQPLDVSNEFTFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTS 60
           G GYP LWPS  C++PLDV+  FTF VI GIL+D          HLGGDEV+T CW +T+
Sbjct: 283 GTGYPDLWPSLSCREPLDVTKNFTFDVISGILADMRKIFPFELFHLGGDEVNTDCWKNTT 342

Query: 61  RIQKWLEKHGMNASQAYQYFVLRAQKIALSHGYEIINWEETFNNFGNKLSRKTVVHNXAD 120
            +++WL+        AY+YFVLRAQ+IA+S  +  +NWEETF++FG  L  +TV+ N   
Sbjct: 343 HVKEWLQGRNFTTKDAYKYFVLRAQQIAISKNWTPVNWEETFSSFGKDLDPRTVIQN--- 399

Query: 121 PLTDHREIHYLVCSAYNFPCRLXXXXXXXXXXXXLRCIVSNQDKWYLDHLDTSWEKFYMN 180
                    +LV       C+              RCI SNQ  WYLDHLD  WE+ Y  
Sbjct: 400 ---------WLVSDI----CQ-------KAVAKGFRCIFSNQGYWYLDHLDVPWEEVYNT 439

Query: 181 EPLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTIWPRAAAAAERLWTPYDKLAKDPTH 240
           EPL  I D   Q+LVIGGEVCMWGE  D S + QTIWPRAAAAAER+W+  + ++K    
Sbjct: 440 EPLNGIEDPSLQKLVIGGEVCMWGETADTSVVLQTIWPRAAAAAERMWSTREAVSKGNIT 499

Query: 241 VTR--RLAHFRCLLN 253
           +T   RL +FRCLLN
Sbjct: 500 LTALPRLHYFRCLLN 514


>AT1G05590.1 | Symbols: HEXO2, ATHEX3 | HEXO2 (BETA-HEXOSAMINIDASE
           2); beta-N-acetylhexosaminidase/ hexosaminidase/
           hydrolase, hydrolyzing O-glycosyl compounds |
           chr1:1669871-1671686 FORWARD
          Length = 580

 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 41/230 (17%)

Query: 24  TFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTSRIQKWLEKHGMNASQAYQYFVLR 83
           T++V+  ++ D          H GGDEV   CW +   I  +L   G   SQ  + ++  
Sbjct: 311 TYEVVKNVIQDIVNQFPESFFHGGGDEVIPGCWKTDPAINSFLSSGG-TLSQLLEKYINS 369

Query: 84  AQKIALSHGYEIINWEETFNNFGNKLSRKTVVHNXADPLTDHREIHYLVCSAYNFPCRLX 143
                +S    ++ WE+   +   K          ADP    +E H ++ +  N P    
Sbjct: 370 TLPYIVSQNRTVVYWEDVLLDAQIK----------ADPSVLPKE-HTILQTWNNGP---- 414

Query: 144 XXXXXXXXXXXLRCIVSNQDKWYLD------------------------HLDTSWEKFYM 179
                       R IVS+ + +YLD                            +W+  Y 
Sbjct: 415 -ENTKRIVAAGYRVIVSSSEFYYLDCGHGGFLGNDSIYDQKESGGGSWCAPFKTWQSIYN 473

Query: 180 NEPLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTIWPRAAAAAERLWT 229
            +    + + E+++LV+GGEV +W E  D + ++  +WPRA+A AE LW+
Sbjct: 474 YDIADGLLNEEERKLVLGGEVALWSEQADSTVLDSRLWPRASALAESLWS 523