Jatropha Genome Database

JcCA0282311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0282311.10 + phase: 0 /pseudo
         (72 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G18360.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    95   7e-21
AT4G18360.2 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    95   9e-21
AT3G14420.3 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    91   2e-19
AT3G14420.2 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    91   2e-19
AT3G14420.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    91   2e-19
AT3G14415.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    89   8e-19
AT3G14150.2 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    62   1e-10
AT3G14150.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    62   1e-10
AT3G14130.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    62   1e-10
AT3G14420.4 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    59   4e-10

>AT4G18360.1 | Symbols:  | (S)-2-hydroxy-acid oxidase,
          peroxisomal, putative / glycolate oxidase, putative /
          short chain alpha-hydroxy acid oxidase, putative |
          chr4:10146141-10148386 REVERSE
          Length = 368

 Score = 95.1 bits (235), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/46 (89%), Positives = 46/46 (100%)

Query: 1  MEITNVMEYEEIARQKLPKMVFDYYASGAEDQWTLKENRNAFSRIL 46
          MEITNVMEYE+IA++KLPKMV+DYYASGAEDQWTL+ENRNAFSRIL
Sbjct: 1  MEITNVMEYEKIAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRIL 46


>AT4G18360.2 | Symbols:  | (S)-2-hydroxy-acid oxidase,
          peroxisomal, putative / glycolate oxidase, putative /
          short chain alpha-hydroxy acid oxidase, putative |
          chr4:10146627-10148386 REVERSE
          Length = 314

 Score = 94.7 bits (234), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 41/46 (89%), Positives = 46/46 (100%)

Query: 1  MEITNVMEYEEIARQKLPKMVFDYYASGAEDQWTLKENRNAFSRIL 46
          MEITNVMEYE+IA++KLPKMV+DYYASGAEDQWTL+ENRNAFSRIL
Sbjct: 1  MEITNVMEYEKIAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRIL 46


>AT3G14420.3 | Symbols:  | (S)-2-hydroxy-acid oxidase,
          peroxisomal, putative / glycolate oxidase, putative /
          short chain alpha-hydroxy acid oxidase, putative |
          chr3:4821804-4823899 FORWARD
          Length = 367

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/46 (84%), Positives = 44/46 (95%)

Query: 1  MEITNVMEYEEIARQKLPKMVFDYYASGAEDQWTLKENRNAFSRIL 46
          MEITNV EY+ IA+QKLPKMV+DYYASGAEDQWTL+ENRNAF+RIL
Sbjct: 1  MEITNVTEYDAIAKQKLPKMVYDYYASGAEDQWTLQENRNAFARIL 46


>AT3G14420.2 | Symbols:  | (S)-2-hydroxy-acid oxidase,
          peroxisomal, putative / glycolate oxidase, putative /
          short chain alpha-hydroxy acid oxidase, putative |
          chr3:4821804-4823899 FORWARD
          Length = 367

 Score = 90.5 bits (223), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/46 (84%), Positives = 44/46 (95%)

Query: 1  MEITNVMEYEEIARQKLPKMVFDYYASGAEDQWTLKENRNAFSRIL 46
          MEITNV EY+ IA+QKLPKMV+DYYASGAEDQWTL+ENRNAF+RIL
Sbjct: 1  MEITNVTEYDAIAKQKLPKMVYDYYASGAEDQWTLQENRNAFARIL 46


>AT3G14420.1 | Symbols:  | (S)-2-hydroxy-acid oxidase,
          peroxisomal, putative / glycolate oxidase, putative /
          short chain alpha-hydroxy acid oxidase, putative |
          chr3:4821804-4823899 FORWARD
          Length = 367

 Score = 90.5 bits (223), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/46 (84%), Positives = 44/46 (95%)

Query: 1  MEITNVMEYEEIARQKLPKMVFDYYASGAEDQWTLKENRNAFSRIL 46
          MEITNV EY+ IA+QKLPKMV+DYYASGAEDQWTL+ENRNAF+RIL
Sbjct: 1  MEITNVTEYDAIAKQKLPKMVYDYYASGAEDQWTLQENRNAFARIL 46


>AT3G14415.1 | Symbols:  | (S)-2-hydroxy-acid oxidase,
          peroxisomal, putative / glycolate oxidase, putative /
          short chain alpha-hydroxy acid oxidase, putative |
          chr3:4818667-4820748 FORWARD
          Length = 367

 Score = 88.6 bits (218), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/46 (82%), Positives = 43/46 (93%)

Query: 1  MEITNVMEYEEIARQKLPKMVFDYYASGAEDQWTLKENRNAFSRIL 46
          MEITNV EY+ IA+ KLPKMV+DYYASGAEDQWTL+ENRNAF+RIL
Sbjct: 1  MEITNVTEYDAIAKAKLPKMVYDYYASGAEDQWTLQENRNAFARIL 46


>AT3G14150.2 | Symbols:  | (S)-2-hydroxy-acid oxidase,
          peroxisomal, putative / glycolate oxidase, putative /
          short chain alpha-hydroxy acid oxidase, putative |
          chr3:4690667-4692679 REVERSE
          Length = 363

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/45 (57%), Positives = 34/45 (75%)

Query: 2  EITNVMEYEEIARQKLPKMVFDYYASGAEDQWTLKENRNAFSRIL 46
          +I NV E++E+A+Q LPKM +D+Y  GAEDQ TL EN  AF RI+
Sbjct: 3  QIVNVDEFQELAKQALPKMYYDFYNGGAEDQHTLNENVQAFRRIM 47


>AT3G14150.1 | Symbols:  | (S)-2-hydroxy-acid oxidase,
          peroxisomal, putative / glycolate oxidase, putative /
          short chain alpha-hydroxy acid oxidase, putative |
          chr3:4690667-4692679 REVERSE
          Length = 363

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/45 (57%), Positives = 34/45 (75%)

Query: 2  EITNVMEYEEIARQKLPKMVFDYYASGAEDQWTLKENRNAFSRIL 46
          +I NV E++E+A+Q LPKM +D+Y  GAEDQ TL EN  AF RI+
Sbjct: 3  QIVNVDEFQELAKQALPKMYYDFYNGGAEDQHTLNENVQAFRRIM 47


>AT3G14130.1 | Symbols:  | (S)-2-hydroxy-acid oxidase,
          peroxisomal, putative / glycolate oxidase, putative /
          short chain alpha-hydroxy acid oxidase, putative |
          chr3:4685844-4687852 REVERSE
          Length = 363

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/45 (57%), Positives = 34/45 (75%)

Query: 2  EITNVMEYEEIARQKLPKMVFDYYASGAEDQWTLKENRNAFSRIL 46
          +I NV E++E+A+Q LPKM +D+Y  GAEDQ TL EN  AF RI+
Sbjct: 3  QIVNVDEFQELAKQALPKMYYDFYNGGAEDQHTLNENVQAFRRIM 47


>AT3G14420.4 | Symbols:  | (S)-2-hydroxy-acid oxidase,
          peroxisomal, putative / glycolate oxidase, putative /
          short chain alpha-hydroxy acid oxidase, putative |
          chr3:4821861-4823899 FORWARD
          Length = 348

 Score = 59.3 bits (142), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/27 (88%), Positives = 27/27 (100%)

Query: 20 MVFDYYASGAEDQWTLKENRNAFSRIL 46
          MV+DYYASGAEDQWTL+ENRNAF+RIL
Sbjct: 1  MVYDYYASGAEDQWTLQENRNAFARIL 27