Jatropha Genome Database
- JcCA0279321.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0279321.10 - phase: 0 /partial
(157 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12680.1 | Symbols: HUA1 | HUA1 (ENHANCER OF AG-4 1); RNA bin... 150 4e-37
AT3G06410.1 | Symbols: | nucleic acid binding / zinc ion bindin... 102 9e-23
AT3G02830.1 | Symbols: ZFN1 | ZFN1 (ZINC FINGER PROTEIN 1); DNA ... 99 1e-21
AT5G18550.1 | Symbols: | nucleic acid binding / zinc ion bindin... 97 6e-21
AT2G47850.2 | Symbols: | zinc finger (CCCH-type) family protein... 96 9e-21
AT2G47850.3 | Symbols: | zinc finger (CCCH-type) family protein... 96 1e-20
AT2G47850.1 | Symbols: | zinc finger (CCCH-type) family protein... 96 1e-20
AT5G16540.2 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA... 92 2e-19
AT5G16540.1 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA... 92 2e-19
AT5G16540.3 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA... 92 2e-19
AT1G04990.1 | Symbols: | zinc finger (CCCH-type) family protein... 88 2e-18
AT1G04990.2 | Symbols: | zinc finger (CCCH-type) family protein... 88 2e-18
AT3G48440.1 | Symbols: | zinc finger (CCCH-type) family protein... 83 6e-17
AT5G63260.1 | Symbols: | zinc finger (CCCH-type) family protein... 78 2e-15
AT2G32930.1 | Symbols: ZFN2 | ZFN2 (ZINC FINGER NUCLEASE 2); DNA... 75 2e-14
AT1G48195.1 | Symbols: | zinc finger (CCCH-type) family protein... 64 3e-11
>AT3G12680.1 | Symbols: HUA1 | HUA1 (ENHANCER OF AG-4 1); RNA
binding | chr3:4025276-4028999 REVERSE
Length = 524
Score = 150 bits (378), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 96/143 (67%), Gaps = 16/143 (11%)
Query: 14 AVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFA 73
A VVP E PERP EPDCPY++KT+RCKYG CKFNHP+++ A+ E D +
Sbjct: 214 APVVP----NEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAV---SVETQD--S 264
Query: 74 LPERPSEPTCAFYMKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQIGSTVTMEGTTGDF 133
LPERPSEP C FYMKTGKCKFG +CKFHHPKDIQ+ +++ IGS+V +
Sbjct: 265 LPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLP-----SSSQDIGSSVGLTSEPDAT 319
Query: 134 NVVKASISLTPALGHNSKGLPIR 156
N ++ TPAL HNSKGLP+R
Sbjct: 320 N--NPHVTFTPALYHNSKGLPVR 340
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 17/118 (14%)
Query: 3 MIIDKDSSLLLAVVVPLIAEMESL------------PERPREPDCPYFLKTKRCKYGLNC 50
++ ++L L +V P + ++L P+RP + +C Y++KT CK+G C
Sbjct: 382 LVSSNTANLNLGLVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERC 441
Query: 51 KFNHPKDKLALF--QGGSEDNDGFAL---PERPSEPTCAFYMKTGKCKFGATCKFHHP 103
KF+HP D+L+ Q + N +L P R C +YMKTG CK+GATCKF HP
Sbjct: 442 KFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHP 499
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 28/111 (25%)
Query: 20 IAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSED----------- 68
+ +SLPERP EP C +++KT +CK+GL+CKF+HPKD S+D
Sbjct: 259 VETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKD--IQLPSSSQDIGSSVGLTSEP 316
Query: 69 ---------------NDGFALPERPSEPTCAFYMKTGKCKFGATCKFHHPK 104
++ LP R E C FY+KTG CK+GATC+++HP+
Sbjct: 317 DATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPE 367
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 63/146 (43%), Gaps = 36/146 (24%)
Query: 19 LIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSED---------- 68
L + LP R E DCP++LKT CKYG C++NHP+ + Q +
Sbjct: 330 LYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTAN 389
Query: 69 -NDGFA---------------------LPERPSEPTCAFYMKTGKCKFGATCKFHHPKD- 105
N G P+RP + C +YMKTG+CKFG CKFHHP D
Sbjct: 390 LNLGLVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADR 449
Query: 106 ---IQMQFGQETNNTVQIGSTVTMEG 128
+ Q Q+ N + + EG
Sbjct: 450 LSAMTKQAPQQPNVKLSLAGYPRREG 475
>AT3G06410.1 | Symbols: | nucleic acid binding / zinc ion binding |
chr3:1947471-1949528 REVERSE
Length = 462
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 24 ESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTC 83
ES PERP EPDC Y+L+T C YG C+FNHP+D+ A+ GG G ALPER P C
Sbjct: 49 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVI-GGVRGEAG-ALPERMGHPVC 106
Query: 84 AFYMKTGKCKFGATCKFHHPKD 105
+M+TG CKFGA+CK+HHP+
Sbjct: 107 QHFMRTGTCKFGASCKYHHPRQ 128
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCAF 85
P+RP +P+C YF++T CK+G +C+++HP D + G + G LP RP C
Sbjct: 304 FPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIG--LPLRPGVAQCTH 361
Query: 86 YMKTGKCKFGATCKFHH 102
+ + G CKFG CKF H
Sbjct: 362 FAQHGICKFGPACKFDH 378
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 66 SEDNDGFALPERPSEPTCAFYMKTGKCKFGATCKFHHPKD 105
S ++ P+RP +P C ++M+TG CKFG++C++HHP D
Sbjct: 296 SSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVD 335
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 45 KYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCAFYMKTGKCKFGATCKFHHPK 104
+G P +L L GG G + PERP EP C +Y++TG C +G+ C+F+HP+
Sbjct: 22 SHGGETAVEAPMWRLGLSGGGGGGGGGESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPR 81
Query: 105 D 105
D
Sbjct: 82 D 82
>AT3G02830.1 | Symbols: ZFN1 | ZFN1 (ZINC FINGER PROTEIN 1); DNA
binding / nuclease/ nucleic acid binding |
chr3:614075-615916 FORWARD
Length = 397
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 4 IIDKDSSLLLAVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQ 63
++++D+ + + E S PERP EPDC Y+++T C++G C+FNHP+D+ +
Sbjct: 15 LMNQDAMWQMNLSSDETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIA 74
Query: 64 GGSEDNDGFALPERPSEPTCAFYMKTGKCKFGATCKFHHPKD 105
+ PER +P C +Y+KTG CKFG TCKFHHP++
Sbjct: 75 TARMRGE---YPERIGQPECEYYLKTGTCKFGVTCKFHHPRN 113
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 7 KDSSLLLAVVVPLIAEME-SLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGG 65
+D L++A A M PER +P+C Y+LKT CK+G+ CKF+HP++K + G
Sbjct: 67 RDRELVIAT-----ARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGI--AG 119
Query: 66 SEDNDGFALPERPSEPTCAFYMKTGKCKFGATCKFHHPK 104
+ P R +E CA++++TG CKFG TCKF+HP+
Sbjct: 120 RVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQ 158
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDN--DGFALPERPSEPTC 83
PERP +P+C +++KT CK+G CKF+HP+D+ Q D LP RP EP C
Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDR----QAPPPDCLLSSIGLPLRPGEPLC 326
Query: 84 AFYMKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQIGSTVTMEGTTGDFNVVKASISLT 143
FY + G CKFG +CKF HP + + + T ++ T T G + +V + + T
Sbjct: 327 VFYTRYGICKFGPSCKFDHPMRV-FTYDNTASETDEVVETST--GKSRRLSVSETRQAAT 383
Query: 144 PALGHNS 150
+ G ++
Sbjct: 384 TSSGKDT 390
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 31/36 (86%)
Query: 73 ALPERPSEPTCAFYMKTGKCKFGATCKFHHPKDIQM 108
+ PERP EP C++Y++TG C+FG+TC+F+HP+D ++
Sbjct: 36 SYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDREL 71
>AT5G18550.1 | Symbols: | nucleic acid binding / zinc ion binding |
chr5:6160515-6162729 FORWARD
Length = 465
Score = 96.7 bits (239), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 8 DSSLLLAVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSE 67
++S+ + E+ PERP EPDC Y+L+T C YG C+FNHP+++ + G
Sbjct: 30 EASMWRLGLRGGGGGGETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRT 89
Query: 68 DNDGFALPERPSEPTCAFYMKTGKCKFGATCKFHHPKD 105
+ F PER +P C +M+TG CKFGA+CK+HHP+
Sbjct: 90 EAGEF--PERMGQPVCQHFMRTGTCKFGASCKYHHPRQ 125
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 24 ESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTC 83
++ P+RP +P+C YF++T CK+G +C+F+HP + + + LP RP C
Sbjct: 295 QTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPE---ASTLSHIGLPLRPGAVPC 351
Query: 84 AFYMKTGKCKFGATCKFHH 102
+ + G CKFG CKF H
Sbjct: 352 THFAQHGICKFGPACKFDH 370
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 74 LPERPSEPTCAFYMKTGKCKFGATCKFHHPKD 105
P+RP +P C ++M+TG CKFG +C+FHHP +
Sbjct: 297 FPQRPEQPECQYFMRTGDCKFGTSCRFHHPME 328
>AT2G47850.2 | Symbols: | zinc finger (CCCH-type) family protein |
chr2:19595953-19598119 FORWARD
Length = 442
Score = 95.9 bits (237), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 24 ESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTC 83
+S PERP PDC Y+++T C YG C++NHP+D+ ++ PER EP C
Sbjct: 40 DSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQ---YPERFGEPPC 96
Query: 84 AFYMKTGKCKFGATCKFHHPKD 105
FY+KTG CKFGA+CKFHHPK+
Sbjct: 97 QFYLKTGTCKFGASCKFHHPKN 118
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 19 LIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERP 78
+I + ++ PERP EP+C Y+LKT CK+G +CKF+HP+D++ G LP RP
Sbjct: 253 VIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIG--LPLRP 310
Query: 79 SEPTCAFYMKTGKCKFGATCKFHHP 103
C FY++ G CKFG+TCKF HP
Sbjct: 311 GVQRCTFYVQNGFCKFGSTCKFDHP 335
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 73 ALPERPSEPTCAFYMKTGKCKFGATCKFHHPKD 105
A PERP EP C +Y+KTG CKFG +CKFHHP+D
Sbjct: 259 AFPERPGEPECQYYLKTGDCKFGTSCKFHHPRD 291
>AT2G47850.3 | Symbols: | zinc finger (CCCH-type) family protein |
chr2:19595953-19598119 FORWARD
Length = 468
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 24 ESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTC 83
+S PERP PDC Y+++T C YG C++NHP+D+ ++ PER EP C
Sbjct: 40 DSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQ---YPERFGEPPC 96
Query: 84 AFYMKTGKCKFGATCKFHHPKD 105
FY+KTG CKFGA+CKFHHPK+
Sbjct: 97 QFYLKTGTCKFGASCKFHHPKN 118
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 19 LIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERP 78
+I + ++ PERP EP+C Y+LKT CK+G +CKF+HP+D++ G LP RP
Sbjct: 279 VIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIG--LPLRP 336
Query: 79 SEPTCAFYMKTGKCKFGATCKFHHP 103
C FY++ G CKFG+TCKF HP
Sbjct: 337 GVQRCTFYVQNGFCKFGSTCKFDHP 361
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 8/94 (8%)
Query: 14 AVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDN---D 70
A V + PER EP C ++LKT CK+G +CKF+HPK+ GGS + +
Sbjct: 75 ASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNA-----GGSMSHVPLN 129
Query: 71 GFALPERPSEPTCAFYMKTGKCKFGATCKFHHPK 104
+ P R + C++Y+KTG+CKFG TCKFHHP+
Sbjct: 130 IYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQ 163
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 73 ALPERPSEPTCAFYMKTGKCKFGATCKFHHPKD 105
A PERP EP C +Y+KTG CKFG +CKFHHP+D
Sbjct: 285 AFPERPGEPECQYYLKTGDCKFGTSCKFHHPRD 317
>AT2G47850.1 | Symbols: | zinc finger (CCCH-type) family protein |
chr2:19595953-19598119 FORWARD
Length = 468
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 24 ESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTC 83
+S PERP PDC Y+++T C YG C++NHP+D+ ++ PER EP C
Sbjct: 40 DSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQ---YPERFGEPPC 96
Query: 84 AFYMKTGKCKFGATCKFHHPKD 105
FY+KTG CKFGA+CKFHHPK+
Sbjct: 97 QFYLKTGTCKFGASCKFHHPKN 118
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 19 LIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERP 78
+I + ++ PERP EP+C Y+LKT CK+G +CKF+HP+D++ G LP RP
Sbjct: 279 VIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIG--LPLRP 336
Query: 79 SEPTCAFYMKTGKCKFGATCKFHHP 103
C FY++ G CKFG+TCKF HP
Sbjct: 337 GVQRCTFYVQNGFCKFGSTCKFDHP 361
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 8/94 (8%)
Query: 14 AVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDN---D 70
A V + PER EP C ++LKT CK+G +CKF+HPK+ GGS + +
Sbjct: 75 ASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNA-----GGSMSHVPLN 129
Query: 71 GFALPERPSEPTCAFYMKTGKCKFGATCKFHHPK 104
+ P R + C++Y+KTG+CKFG TCKFHHP+
Sbjct: 130 IYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQ 163
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 73 ALPERPSEPTCAFYMKTGKCKFGATCKFHHPKD 105
A PERP EP C +Y+KTG CKFG +CKFHHP+D
Sbjct: 285 AFPERPGEPECQYYLKTGDCKFGTSCKFHHPRD 317
>AT5G16540.2 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding |
chr5:5403437-5405034 FORWARD
Length = 368
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 25 SLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCA 84
S PER EPDC Y+++T C++G C+FNHP D+ + + PER +P C
Sbjct: 38 SYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGE---YPERIGQPECE 94
Query: 85 FYMKTGKCKFGATCKFHHPKD 105
FY+KTG CKFG TCKFHHP++
Sbjct: 95 FYLKTGTCKFGVTCKFHHPRN 115
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 64/99 (64%), Gaps = 9/99 (9%)
Query: 27 PERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCAFY 86
PER +P+C ++LKT CK+G+ CKF+HP++K + GS + + P RP+E C+++
Sbjct: 85 PERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGI--DGSVSVNVLSYPLRPNEDDCSYF 142
Query: 87 MKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQI-GSTV 124
++ G+CKFG TCKF+HP+ Q TN V + GS V
Sbjct: 143 LRIGQCKFGGTCKFNHPQT------QSTNLMVSVRGSPV 175
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 23/111 (20%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLA-----LFQGGSEDNDGFALPERPSE 80
PERP +P+C +++KT CK+G CKF+HP+D+ + G E
Sbjct: 240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSG--------------E 285
Query: 81 PTCAFYMKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQIGSTVTMEGTTG 131
P C FY + G CKFG +CKF HP M+ NNT + ++ T
Sbjct: 286 PLCVFYSRYGICKFGPSCKFDHP----MRVFTYNNNTASPSPSSSLHQETA 332
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 25 SLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDK 58
S P RP E DC YFL+ +CK+G CKFNHP+ +
Sbjct: 129 SYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQ 162
>AT5G16540.1 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding |
chr5:5403437-5405034 FORWARD
Length = 375
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 25 SLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCA 84
S PER EPDC Y+++T C++G C+FNHP D+ + + PER +P C
Sbjct: 38 SYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGE---YPERIGQPECE 94
Query: 85 FYMKTGKCKFGATCKFHHPKD 105
FY+KTG CKFG TCKFHHP++
Sbjct: 95 FYLKTGTCKFGVTCKFHHPRN 115
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 64/99 (64%), Gaps = 9/99 (9%)
Query: 27 PERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCAFY 86
PER +P+C ++LKT CK+G+ CKF+HP++K + GS + + P RP+E C+++
Sbjct: 85 PERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGI--DGSVSVNVLSYPLRPNEDDCSYF 142
Query: 87 MKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQI-GSTV 124
++ G+CKFG TCKF+HP+ Q TN V + GS V
Sbjct: 143 LRIGQCKFGGTCKFNHPQT------QSTNLMVSVRGSPV 175
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDN--DGFALPERPSEPTC 83
PERP +P+C +++KT CK+G CKF+HP+D+ Q D LP RP EP C
Sbjct: 240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDR----QTPPPDCVLSSVGLPLRPGEPLC 295
Query: 84 AFYMKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQIGSTVTMEGTTG 131
FY + G CKFG +CKF HP M+ NNT + ++ T
Sbjct: 296 VFYSRYGICKFGPSCKFDHP----MRVFTYNNNTASPSPSSSLHQETA 339
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 25 SLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDK 58
S P RP E DC YFL+ +CK+G CKFNHP+ +
Sbjct: 129 SYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQ 162
>AT5G16540.3 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding |
chr5:5403598-5405034 FORWARD
Length = 354
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 25 SLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCA 84
S PER EPDC Y+++T C++G C+FNHP D+ + + PER +P C
Sbjct: 17 SYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGE---YPERIGQPECE 73
Query: 85 FYMKTGKCKFGATCKFHHPKD 105
FY+KTG CKFG TCKFHHP++
Sbjct: 74 FYLKTGTCKFGVTCKFHHPRN 94
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 64/99 (64%), Gaps = 9/99 (9%)
Query: 27 PERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCAFY 86
PER +P+C ++LKT CK+G+ CKF+HP++K + GS + + P RP+E C+++
Sbjct: 64 PERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGI--DGSVSVNVLSYPLRPNEDDCSYF 121
Query: 87 MKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQI-GSTV 124
++ G+CKFG TCKF+HP+ Q TN V + GS V
Sbjct: 122 LRIGQCKFGGTCKFNHPQT------QSTNLMVSVRGSPV 154
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDN--DGFALPERPSEPTC 83
PERP +P+C +++KT CK+G CKF+HP+D+ Q D LP RP EP C
Sbjct: 219 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDR----QTPPPDCVLSSVGLPLRPGEPLC 274
Query: 84 AFYMKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQIGSTVTMEGTTG 131
FY + G CKFG +CKF HP M+ NNT + ++ T
Sbjct: 275 VFYSRYGICKFGPSCKFDHP----MRVFTYNNNTASPSPSSSLHQETA 318
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 25 SLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDK 58
S P RP E DC YFL+ +CK+G CKFNHP+ +
Sbjct: 108 SYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQ 141
>AT1G04990.1 | Symbols: | zinc finger (CCCH-type) family protein |
chr1:1419368-1421454 REVERSE
Length = 404
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 71/137 (51%), Gaps = 12/137 (8%)
Query: 24 ESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDN--DGFALPERPSEP 81
E LPER +PDC YFLKT CKYG CK++HPKD+ G++ + LP R E
Sbjct: 85 EELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDR-----NGAQPVMFNVIGLPMRLGEK 139
Query: 82 TCAFYMKTGKCKFGATCKFHHPK---DIQMQFGQET--NNTVQIGSTVTMEGTTGDFNVV 136
C +Y++TG C+FG CKFHHP+ +G + ++ S +TM T G
Sbjct: 140 PCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADLRYASGLTMMSTYGTLPRP 199
Query: 137 KASISLTPALGHNSKGL 153
+ S P L S+G
Sbjct: 200 QVPQSYVPILVSPSQGF 216
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 20 IAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPS 79
+ E+ P+RP E DC ++L+T C YG +C++NHP E+ LPER
Sbjct: 38 VEELNPYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKEE-----LPERIG 92
Query: 80 EPTCAFYMKTGKCKFGATCKFHHPKD 105
+P C +++KTG CK+G TCK+HHPKD
Sbjct: 93 QPDCEYFLKTGACKYGPTCKYHHPKD 118
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 9 SSLLLAVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSED 68
SS +A+ V L L E +P+C +F+ T CKYG +CK++HP +++ Q
Sbjct: 244 SSASMAMAVAL---NRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRIS--QPPPSL 298
Query: 69 NDGFALPERPSEPTCAFYMKTGKCKFGATCKFHHP 103
+ F LP RP +P C + G CKFG CKF HP
Sbjct: 299 INPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHP 333
>AT1G04990.2 | Symbols: | zinc finger (CCCH-type) family protein |
chr1:1419368-1421454 REVERSE
Length = 404
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 71/137 (51%), Gaps = 12/137 (8%)
Query: 24 ESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDN--DGFALPERPSEP 81
E LPER +PDC YFLKT CKYG CK++HPKD+ G++ + LP R E
Sbjct: 85 EELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDR-----NGAQPVMFNVIGLPMRLGEK 139
Query: 82 TCAFYMKTGKCKFGATCKFHHPK---DIQMQFGQET--NNTVQIGSTVTMEGTTGDFNVV 136
C +Y++TG C+FG CKFHHP+ +G + ++ S +TM T G
Sbjct: 140 PCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADLRYASGLTMMSTYGTLPRP 199
Query: 137 KASISLTPALGHNSKGL 153
+ S P L S+G
Sbjct: 200 QVPQSYVPILVSPSQGF 216
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 20 IAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPS 79
+ E+ P+RP E DC ++L+T C YG +C++NHP E+ LPER
Sbjct: 38 VEELNPYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKEE-----LPERIG 92
Query: 80 EPTCAFYMKTGKCKFGATCKFHHPKD 105
+P C +++KTG CK+G TCK+HHPKD
Sbjct: 93 QPDCEYFLKTGACKYGPTCKYHHPKD 118
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 9 SSLLLAVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSED 68
SS +A+ V L L E +P+C +F+ T CKYG +CK++HP +++ Q
Sbjct: 244 SSASMAMAVAL---NRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRIS--QPPPSL 298
Query: 69 NDGFALPERPSEPTCAFYMKTGKCKFGATCKFHHP 103
+ F LP RP +P C + G CKFG CKF HP
Sbjct: 299 INPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHP 333
>AT3G48440.1 | Symbols: | zinc finger (CCCH-type) family protein |
chr3:17941402-17943576 FORWARD
Length = 448
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 8 DSSLLLAVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSE 67
++S+LL+ + E PERP +P+C Y++KT CK+ NCK++HPK++L +
Sbjct: 326 ETSMLLSQYRHQMP-AEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYAL 384
Query: 68 DNDGFALPERPSEPTCAFYMKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQIGSTVTME 127
++ G LP RP + C +Y + G CKFG C+F H +Q + E++ + V+
Sbjct: 385 NDKG--LPLRPDQNICTYYSRYGICKFGPACRFDH--SVQPPYSTESSQAIVEPPQVSAN 440
Query: 128 GTTGD 132
G D
Sbjct: 441 GNESD 445
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 12/96 (12%)
Query: 34 DCPYFLKTKRCKYGLNCKFNH--PKDKLALFQGGSEDNDGFALPERPSEPTCAFYMKTGK 91
DC Y+ +T CKYG C+FNH PK LA + + + LP RP E C +YM+ G
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTIPKSGLA----SAPELNFLGLPLRPGEVECPYYMRNGS 218
Query: 92 CKFGATCKFHHPKDIQMQFGQET-----NNTVQIGS 122
CK+GA CKF+HP D G ++ NN V IG+
Sbjct: 219 CKYGAECKFNHP-DPTTIGGTDSPSFRGNNGVSIGT 253
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 56 KDKLALFQGGSEDNDGFALPERPSEPTCAFYMKTGKCKFGATCKFHHPKDIQMQFGQET 114
+D G SE+ P RP C+FYM+TG CKFG++CKF+HP + Q ++
Sbjct: 89 RDGYGYGDGWSENESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDN 147
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHP 55
LP RP E +CPY+++ CKYG CKFNHP
Sbjct: 201 LPLRPGEVECPYYMRNGSCKYGAECKFNHP 230
>AT5G63260.1 | Symbols: | zinc finger (CCCH-type) family protein |
chr5:25361900-25364453 FORWARD
Length = 435
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Query: 23 MESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPT 82
+E PERP +P+C Y+LKT CK+ CK++HPK++L S ++ G LP RP +
Sbjct: 328 VEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKG--LPLRPDQSM 385
Query: 83 CAFYMKTGKCKFGATCKFHHPKDIQMQFGQETNNTV---QIGST 123
C Y + G CKFG C+F H I F ++ TV Q+G+
Sbjct: 386 CTHYSRYGICKFGPACRFDH--SIPPTFSPSSSQTVEARQVGAN 427
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 13 LAVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGF 72
L + + E + E P+ +C Y+ +T CKYG +C+F+H K+ + + +
Sbjct: 132 LQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNS--PASVPELNFL 189
Query: 73 ALPERPSEPTCAFYMKTGKCKFGATCKFHHP 103
LP RP E C FYM+ G CKFG+ CKF+HP
Sbjct: 190 GLPIRPGEKECPFYMRNGSCKFGSDCKFNHP 220
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 57 DKLALF-------QGGSEDNDGFALPERPSEPTCAFYMKTGKCKFGATCKFHHPKDIQMQ 109
D ALF + GSE P RP C+FYM+TG CK+G++CKF+HP ++Q
Sbjct: 74 DSRALFGSDQKEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQ 133
Query: 110 FGQE 113
G+E
Sbjct: 134 IGRE 137
>AT2G32930.1 | Symbols: ZFN2 | ZFN2 (ZINC FINGER NUCLEASE 2); DNA
binding / nuclease/ nucleic acid binding |
chr2:13965990-13968419 REVERSE
Length = 453
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 20 IAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPS 79
+ + P+RP E DC +FL+T +C YG +C++NHP L QG D LPER
Sbjct: 35 MEQSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHPLTNLP--QGIIYYRD--QLPERVG 90
Query: 80 EPTCAFYMKTGKCKFGATCKFHHPKD 105
+P C +TG CK+G TCK+HHPKD
Sbjct: 91 QPDC----ETGACKYGPTCKYHHPKD 112
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 19 LIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERP 78
+I + LPER +PDC +T CKYG CK++HPKD+ G + LP R
Sbjct: 78 IIYYRDQLPERVGQPDC----ETGACKYGPTCKYHHPKDRNG---AGPVLFNVLGLPMRQ 130
Query: 79 SEPTCAFYMKTGKCKFGATCKFHHP 103
E C +YM+TG C+FG CKFHHP
Sbjct: 131 GEKPCPYYMQTGLCRFGVACKFHHP 155
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 34 DCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCAFYMKTGKCK 93
+C +F+ T CKYG +CK++HPK++L Q + LP RP +P C + G CK
Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHPKERL--LQSPPTLLNPIVLPARPGQPACGNFKAYGFCK 323
Query: 94 FGATCKFHH 102
FGA CKF H
Sbjct: 324 FGANCKFDH 332
>AT1G48195.1 | Symbols: | zinc finger (CCCH-type) family protein |
chr1:17796349-17796597 FORWARD
Length = 82
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 24 ESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTC 83
E PERP EP+C Y+L+T C NCK++HPK+ + ++ G LP RP + C
Sbjct: 4 EKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKG--LPLRPGQAIC 61
Query: 84 AFYMKTGKCKFGATCKFHH 102
Y + G C+ G TCKF H
Sbjct: 62 PHYSRFGICRSGPTCKFDH 80
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 74 LPERPSEPTCAFYMKTGKCKFGATCKFHHPKDI 106
PERP EP C++Y++TG C CK+HHPK+I
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPKNI 38