Jatropha Genome Database

JcCA0277831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0277831.10 - phase: 0 /partial
         (303 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30310.2 | Symbols:  | ribitol kinase, putative | chr4:148319...   541   e-154
AT4G30310.1 | Symbols:  | ribitol kinase, putative | chr4:148319...   530   e-151
AT4G30310.3 | Symbols:  | ribitol kinase, putative | chr4:148326...   338   3e-93

>AT4G30310.2 | Symbols:  | ribitol kinase, putative |
           chr4:14831913-14835092 FORWARD
          Length = 579

 Score =  541 bits (1394), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 253/299 (84%), Positives = 282/299 (94%)

Query: 1   MSTSTIATFPRRTVFLGVDVGTGSARAGLFNENGKLLGTASSPIQIWKERDCVEQSSTDI 60
           M+T+ +  FP R+VFLGVDVGTGSARAGLF++NGKLLG+A+SPIQIWK+ DC+EQSSTDI
Sbjct: 1   MTTAELNPFPSRSVFLGVDVGTGSARAGLFDDNGKLLGSATSPIQIWKDGDCIEQSSTDI 60

Query: 61  WHAICAAVKSACNLADVSGEEVTGIGFAATCSLVAVDSDGAPVSVSWSGDSRRNIIVWMD 120
           WHA+CAAVKSAC+LA+VS  EV GIGFAATCSLVAVD++G+PV+VSWSGDSRRNIIVWMD
Sbjct: 61  WHAVCAAVKSACSLANVSDVEVKGIGFAATCSLVAVDAEGSPVTVSWSGDSRRNIIVWMD 120

Query: 121 HRAVKQAEKINSSNSPVLQYCGGALSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSY 180
           HRAVKQAE+INS NSPVLQYCGG +SPEM+PPKLLWVKENL+ESWSMV++WMDLSDWLSY
Sbjct: 121 HRAVKQAERINSFNSPVLQYCGGGVSPEMEPPKLLWVKENLKESWSMVYKWMDLSDWLSY 180

Query: 181 RATGDDTRSLCTTVCKWTYLGHAHMHQINEKDSRDMEACGWDDDFWEEIGLGDLVDGHHA 240
           RATGDDTRSLCTTVCKWTYLGHAHMHQ+ EK SRDMEACGWDD+FWEEIGLGDLVDGHHA
Sbjct: 181 RATGDDTRSLCTTVCKWTYLGHAHMHQMTEKASRDMEACGWDDEFWEEIGLGDLVDGHHA 240

Query: 241 KIGRSVAFPGHALGSGLTPTAAKELGLVAGTPVGTSLIDAHAGGVGIMESALEADSDAK 299
           KIGRSVAFPGH LG+GLT TAAKELGL+AGTPVGTSLIDAHAGGVG+MES LE+DS  K
Sbjct: 241 KIGRSVAFPGHPLGNGLTATAAKELGLLAGTPVGTSLIDAHAGGVGVMESKLESDSLTK 299


>AT4G30310.1 | Symbols:  | ribitol kinase, putative |
           chr4:14831913-14834798 FORWARD
          Length = 499

 Score =  530 bits (1364), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 247/291 (84%), Positives = 276/291 (94%)

Query: 1   MSTSTIATFPRRTVFLGVDVGTGSARAGLFNENGKLLGTASSPIQIWKERDCVEQSSTDI 60
           M+T+ +  FP R+VFLGVDVGTGSARAGLF++NGKLLG+A+SPIQIWK+ DC+EQSSTDI
Sbjct: 1   MTTAELNPFPSRSVFLGVDVGTGSARAGLFDDNGKLLGSATSPIQIWKDGDCIEQSSTDI 60

Query: 61  WHAICAAVKSACNLADVSGEEVTGIGFAATCSLVAVDSDGAPVSVSWSGDSRRNIIVWMD 120
           WHA+CAAVKSAC+LA+VS  EV GIGFAATCSLVAVD++G+PV+VSWSGDSRRNIIVWMD
Sbjct: 61  WHAVCAAVKSACSLANVSDVEVKGIGFAATCSLVAVDAEGSPVTVSWSGDSRRNIIVWMD 120

Query: 121 HRAVKQAEKINSSNSPVLQYCGGALSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSY 180
           HRAVKQAE+INS NSPVLQYCGG +SPEM+PPKLLWVKENL+ESWSMV++WMDLSDWLSY
Sbjct: 121 HRAVKQAERINSFNSPVLQYCGGGVSPEMEPPKLLWVKENLKESWSMVYKWMDLSDWLSY 180

Query: 181 RATGDDTRSLCTTVCKWTYLGHAHMHQINEKDSRDMEACGWDDDFWEEIGLGDLVDGHHA 240
           RATGDDTRSLCTTVCKWTYLGHAHMHQ+ EK SRDMEACGWDD+FWEEIGLGDLVDGHHA
Sbjct: 181 RATGDDTRSLCTTVCKWTYLGHAHMHQMTEKASRDMEACGWDDEFWEEIGLGDLVDGHHA 240

Query: 241 KIGRSVAFPGHALGSGLTPTAAKELGLVAGTPVGTSLIDAHAGGVGIMESA 291
           KIGRSVAFPGH LG+GLT TAAKELGL+AGTPVGTSLIDAHAGGVG+ME +
Sbjct: 241 KIGRSVAFPGHPLGNGLTATAAKELGLLAGTPVGTSLIDAHAGGVGVMEKS 291


>AT4G30310.3 | Symbols:  | ribitol kinase, putative |
           chr4:14832633-14835092 FORWARD
          Length = 451

 Score =  338 bits (867), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 154/173 (89%), Positives = 166/173 (95%)

Query: 119 MDHRAVKQAEKINSSNSPVLQYCGGALSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWL 178
           MDHRAVKQAE+INS NSPVLQYCGG +SPEM+PPKLLWVKENL+ESWSMV++WMDLSDWL
Sbjct: 1   MDHRAVKQAERINSFNSPVLQYCGGGVSPEMEPPKLLWVKENLKESWSMVYKWMDLSDWL 60

Query: 179 SYRATGDDTRSLCTTVCKWTYLGHAHMHQINEKDSRDMEACGWDDDFWEEIGLGDLVDGH 238
           SYRATGDDTRSLCTTVCKWTYLGHAHMHQ+ EK SRDMEACGWDD+FWEEIGLGDLVDGH
Sbjct: 61  SYRATGDDTRSLCTTVCKWTYLGHAHMHQMTEKASRDMEACGWDDEFWEEIGLGDLVDGH 120

Query: 239 HAKIGRSVAFPGHALGSGLTPTAAKELGLVAGTPVGTSLIDAHAGGVGIMESA 291
           HAKIGRSVAFPGH LG+GLT TAAKELGL+AGTPVGTSLIDAHAGGVG+ME +
Sbjct: 121 HAKIGRSVAFPGHPLGNGLTATAAKELGLLAGTPVGTSLIDAHAGGVGVMEKS 173