Jatropha Genome Database

JcCA0277701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0277701.10 - phase: 0 /pseudo/partial
         (465 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02880.1 | Symbols:  | unknown protein | chr4:1275131-1277913...   220   1e-57
AT1G03290.1 | Symbols:  | unknown protein | chr1:807970-810680 F...   219   3e-57

>AT4G02880.1 | Symbols:  | unknown protein | chr4:1275131-1277913
           FORWARD
          Length = 552

 Score =  220 bits (561), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/307 (43%), Positives = 176/307 (57%), Gaps = 25/307 (8%)

Query: 155 KSNEDIRIDFLEDIVEAAKNNKKTLFLAMESSMNMMRQVXXXXXXXXXXXXXXXSAGLDI 214
           +S +   +  LE I+E AK+NK+TLF  MES MN+MR+V                 G D 
Sbjct: 266 RSTQGCNMVHLEQIIEDAKSNKRTLFTVMESIMNLMREVELQEKEAEKAKEDASIGGFDT 325

Query: 215 LKKVEELEQMLRHAKEANDMHAGEIYGEKAILATEVRELQGRLLSLSDERDKALAILDEM 274
           L KVEEL++ML HAKEANDM AGE+YGE++IL TEV EL+ RL+SLS+ERD +L++LDEM
Sbjct: 326 LDKVEELKKMLEHAKEANDMAAGEVYGERSILTTEVNELENRLISLSEERDNSLSVLDEM 385

Query: 275 NQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMDKVVQESKILQRQAEENSKL 334
                                                 IM++VVQESK+LQ++AEENSKL
Sbjct: 386 RVDLEIRLATALGIKNAAEQEKQEKEGSARKAFAEQEAIMERVVQESKLLQQEAEENSKL 445

Query: 335 REFLVDRGHVVDTLQGEISVICQDVRLLKERFDENVPLSKSISSTQTXXXXXXXXXXXXX 394
           REFL+D G +VD+LQGEISVICQD+R LKE+FD  VPLS+SISS+QT             
Sbjct: 446 REFLMDHGRIVDSLQGEISVICQDIRHLKEKFDNRVPLSQSISSSQT------------- 492

Query: 395 XXXXXXXXXXXXXXXXXXXXEPRDTSKSPKERSPTSSIHDQSPKSQHEEDKRTDRKELLD 454
                               +P + S      +P +S +++SPK+   E     RKELLD
Sbjct: 493 ---SCKLASSASSMKSLLTEKPLEASY----ETPEASSNNKSPKASVNE-----RKELLD 540

Query: 455 EGWDFFE 461
           +GWDFF+
Sbjct: 541 DGWDFFD 547


>AT1G03290.1 | Symbols:  | unknown protein | chr1:807970-810680
           FORWARD
          Length = 571

 Score =  219 bits (558), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 115/213 (53%), Positives = 143/213 (67%)

Query: 162 IDFLEDIVEAAKNNKKTLFLAMESSMNMMRQVXXXXXXXXXXXXXXXSAGLDILKKVEEL 221
           +D LEDI+E AK+NKK L   ME+  N+MR+V                 GLD L+KVEEL
Sbjct: 285 VDQLEDIIEDAKSNKKNLLTEMETVTNIMREVELKEKDAEKSKEEAARGGLDTLQKVEEL 344

Query: 222 EQMLRHAKEANDMHAGEIYGEKAILATEVRELQGRLLSLSDERDKALAILDEMNQXXXXX 281
           ++ML HAKEANDMHAGE+YGEK+ILATEV+EL+ RLL+LS+ER+K+LAILDEM       
Sbjct: 345 KKMLEHAKEANDMHAGEVYGEKSILATEVKELENRLLNLSEERNKSLAILDEMRGSLEIR 404

Query: 282 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMDKVVQESKILQRQAEENSKLREFLVDR 341
                                           M+KVVQESK+LQ++AEENSKLR+FL+DR
Sbjct: 405 LAAALELKKTAEKEKKDKEDSALKALAEQEANMEKVVQESKLLQQEAEENSKLRDFLMDR 464

Query: 342 GHVVDTLQGEISVICQDVRLLKERFDENVPLSK 374
           G +VDTLQGEISVICQDV+LLKE+F+  VPL+K
Sbjct: 465 GQIVDTLQGEISVICQDVKLLKEKFENRVPLTK 497