Jatropha Genome Database

JcCA0277661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0277661.10 - phase: 0 
         (250 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G43090.1 | Symbols:  | aconitase C-terminal domain-containing...   298   3e-81
AT3G58990.1 | Symbols:  | aconitase C-terminal domain-containing...   269   1e-72
AT2G43100.1 | Symbols:  | aconitase C-terminal domain-containing...   252   2e-67

>AT2G43090.1 | Symbols:  | aconitase C-terminal domain-containing
           protein | chr2:17918957-17919712 FORWARD
          Length = 251

 Score =  298 bits (762), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 149/212 (70%), Positives = 163/212 (76%), Gaps = 8/212 (3%)

Query: 42  STFKPLTSN-ARSVLVPRXXXXXXXXXXXXXXXFHGLCYVVGDNIDTDQIIPAEYLTLVP 100
           S FKPL S  A S  V R               FHGLCYVVGDNIDTDQIIPAE+LTLVP
Sbjct: 42  SNFKPLVSREASSSFVTRSAAEPQERKT-----FHGLCYVVGDNIDTDQIIPAEFLTLVP 96

Query: 101 SNPAEYEKLGSYALIGLPASYETRFIEPGETKTKYSIVIGGDNFGCGSSREHXXXXXXXX 160
           SNP EYEKLGSYAL+GLPASY+ RF++PGE KTKYSI+IGG+NFGCGSSREH        
Sbjct: 97  SNPEEYEKLGSYALVGLPASYKERFVQPGEMKTKYSIIIGGENFGCGSSREHAPVCLGAA 156

Query: 161 XXXXXXXESYARIFFRNSVATGEIYPLESEVRICEECKTGDVVTIELAEGR--LINHTTG 218
                  +SYARIFFRNSVATGE+YPL+SEVR+C+EC TGDV T+EL EG   LINHTTG
Sbjct: 157 GAKAVVAQSYARIFFRNSVATGEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTG 216

Query: 219 KEYILKPIGDAGPVIEAGGIFAYARKTGMIPS 250
           KEY LKPIGDAGPVI+AGGIFAYARK GMIPS
Sbjct: 217 KEYKLKPIGDAGPVIDAGGIFAYARKAGMIPS 248


>AT3G58990.1 | Symbols:  | aconitase C-terminal domain-containing
           protein | chr3:21797524-21798285 REVERSE
          Length = 253

 Score =  269 bits (688), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 134/211 (63%), Positives = 153/211 (72%), Gaps = 3/211 (1%)

Query: 43  TFKPLTSNARSVLVPRXXXXXXXXXXXXXXXFHGLCYVVGDNIDTDQIIPAEYLTLVPSN 102
            +KPLTS++ +++                  FHGLC+V+ DNIDTDQIIPAEY TL+PS 
Sbjct: 42  NYKPLTSSSATIITRVAASSSDSGESITRETFHGLCFVLKDNIDTDQIIPAEYGTLIPSI 101

Query: 103 PAEYEKLGSYALIGLPASYETRFIEPGETKTKYSIVIGGDNFGCGSSREHXXXXXXXXXX 162
           P + EKLGS+AL GLP  Y  RF+ PGE K+KYS++IGGDNFGCGSSREH          
Sbjct: 102 PEDREKLGSFALNGLPKFYNERFVVPGEMKSKYSVIIGGDNFGCGSSREHAPVCLGAAGA 161

Query: 163 XXXXXESYARIFFRNSVATGEIYPLESEVRICEECKTGDVVTIELAE---GRLINHTTGK 219
                ESYARIFFRN VATGEI+PLESEVRIC+ECKTGDVVTIE  E     LINHTT K
Sbjct: 162 KAVVAESYARIFFRNCVATGEIFPLESEVRICDECKTGDVVTIEHKEDGSSLLINHTTRK 221

Query: 220 EYILKPIGDAGPVIEAGGIFAYARKTGMIPS 250
           EY LKP+GDAGPVI+AGGIFAYARK GMIPS
Sbjct: 222 EYKLKPLGDAGPVIDAGGIFAYARKAGMIPS 252


>AT2G43100.1 | Symbols:  | aconitase C-terminal domain-containing
           protein | chr2:17920685-17921455 FORWARD
          Length = 256

 Score =  252 bits (643), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 121/179 (67%), Positives = 139/179 (77%), Gaps = 2/179 (1%)

Query: 74  FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPAEYEKLGSYALIGLPASYETRFIEPGETKT 133
           FHGLCYV+ DNIDTDQIIPA      PSN  E +++ ++AL GLP  ++TRFIEPGE ++
Sbjct: 76  FHGLCYVLKDNIDTDQIIPAGAACTFPSNQQERDEIAAHALSGLPDFHKTRFIEPGENRS 135

Query: 134 KYSIVIGGDNFGCGSSREHXXXXXXXXXXXXXXXESYARIFFRNSVATGEIYPLESEVRI 193
           KYSI+IGG+NFGCGSSREH               ESYARIFFRNSVATGE++PLESEVR+
Sbjct: 136 KYSIIIGGENFGCGSSREHAPVCLGAAGAKAIVAESYARIFFRNSVATGEVFPLESEVRV 195

Query: 194 CEECKTGDVVTIELAE--GRLINHTTGKEYILKPIGDAGPVIEAGGIFAYARKTGMIPS 250
           CEECKTGD VTIEL++  G L NHTTGK Y LK IGDAGPVI+AGGIFAYAR  GMIPS
Sbjct: 196 CEECKTGDTVTIELSDSGGLLTNHTTGKNYKLKSIGDAGPVIDAGGIFAYARMMGMIPS 254