Jatropha Genome Database
- JcCA0274811.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0274811.10 - phase: 0
(403 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07870.1 | Symbols: | F-box family protein | chr3:2510871-25... 417 e-117
AT4G12560.2 | Symbols: | F-box family protein | chr4:7441815-74... 102 6e-22
AT4G12560.1 | Symbols: | F-box family protein | chr4:7441815-74... 102 6e-22
AT3G23880.1 | Symbols: | F-box family protein | chr3:8622061-86... 90 3e-18
AT3G06240.1 | Symbols: | F-box family protein | chr3:1887336-18... 84 2e-16
AT4G09190.1 | Symbols: | F-box family protein | chr4:5855176-58... 74 2e-13
AT1G32420.1 | Symbols: | F-box family protein | chr1:11701995-1... 73 3e-13
AT5G50220.1 | Symbols: | F-box family protein | chr5:20446068-2... 70 2e-12
AT3G16210.1 | Symbols: | F-box family protein | chr3:5494533-54... 68 1e-11
AT4G22390.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 6e-11
AT2G27520.1 | Symbols: | F-box family protein | chr2:11762061-1... 63 3e-10
AT1G47790.1 | Symbols: | F-box family protein | chr1:17600004-1... 63 4e-10
AT3G23260.1 | Symbols: | F-box family protein | chr3:8313334-83... 62 5e-10
AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483... 62 7e-10
AT4G38870.1 | Symbols: | F-box family protein | chr4:18132583-1... 60 2e-09
AT5G49610.1 | Symbols: | F-box family protein | chr5:20131448-2... 57 2e-08
AT1G27340.1 | Symbols: | F-box family protein | chr1:9495741-94... 54 1e-07
AT1G50870.1 | Symbols: | F-box family protein | chr1:18855147-1... 54 1e-07
AT4G17780.1 | Symbols: | F-box family protein | chr4:9880321-98... 54 1e-07
AT3G10240.1 | Symbols: | F-box protein-related | chr3:3166698-3... 54 2e-07
AT2G17310.1 | Symbols: SON1 | SON1 (SUPPRESSOR OF NIM1-1 1) | ch... 53 4e-07
AT5G18160.1 | Symbols: | F-box family protein | chr5:6002770-60... 53 4e-07
AT2G43440.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 8e-07
AT3G57590.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 51 1e-06
AT1G70960.1 | Symbols: | F-box family protein | chr1:26756253-2... 51 2e-06
AT4G19940.1 | Symbols: | F-box family protein | chr4:10806195-1... 51 2e-06
AT3G20690.1 | Symbols: | F-box protein-related | chr3:7231570-7... 50 2e-06
AT3G18910.1 | Symbols: | F-box family protein | chr3:6521760-65... 50 2e-06
AT4G19930.1 | Symbols: | F-box family protein | chr4:10803558-1... 49 7e-06
AT5G36200.1 | Symbols: | F-box family protein | chr5:14244106-1... 49 7e-06
AT1G14315.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 8e-06
AT3G21120.1 | Symbols: | F-box family protein | chr3:7406326-74... 48 1e-05
>AT3G07870.1 | Symbols: | F-box family protein |
chr3:2510871-2512124 FORWARD
Length = 417
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/395 (54%), Positives = 270/395 (68%), Gaps = 13/395 (3%)
Query: 13 FEDLPNEIVYDILSRLPISSLVQFKCVCKSWRT-LTQDPNLVSHYLSSTIKKDPCLVLHC 71
E LP +I+ DI SRLPISS+ + VC+SWR+ LTQ L S S T PCL+LHC
Sbjct: 25 LESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPT---KPCLLLHC 81
Query: 72 DFPIRNQLYFIDFAADQEKDKVKRLNAPFWPVMPEFDVVGSCNSLLCLVDSLYHDSVYIY 131
D PIRN L+F+D + ++++ K K+ F MPEFDVVGSCN LLCL DSLY+DS+Y+Y
Sbjct: 82 DSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYLY 141
Query: 132 NPFSRNYLELPKSLN-YLDQEVVFGFGYDPRSXXXXXXXXXXXRNXXXXXXXYPRAR-RL 189
NPF+ N LELP+ N Y DQE+VFGFG+ + R R R R+
Sbjct: 142 NPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRI 201
Query: 190 VYTQSEVQILTLGDR------EWRSLGKIAYQLVRRPAEALVGGRLHWVSRPRRYNPVRR 243
Y QSEVQILTL + WRSLGK Y+ V+R +EALV GRLH+V+RPRR+ P R+
Sbjct: 202 QYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRK 261
Query: 244 IISFDLADEKFEEVQKPECGGLSKRNYHLVVLKGCLSAGVYCNYGRIEIWVMKEYNVKES 303
+SFDL DE+F+E+ KP+CGGL++ N+ LV LKGCL A VY NYG+++IWVMK Y VKES
Sbjct: 262 FVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKES 321
Query: 304 WVKEYSIGSYMPKGLKQNLERPFLKIWKNSXXXXXXXXXXXXXNGEVLLEYKSRILVSYD 363
W KEYSIG+Y+PKGLKQNL+RP + IWKN+ NGE+LLEYKSR+LV+YD
Sbjct: 322 WGKEYSIGTYLPKGLKQNLDRP-MWIWKNAENGKVVRVLCLLENGEILLEYKSRVLVAYD 380
Query: 364 PNLGKFKDLSLQGIPKLFQTIVHVGSFNWIDNPID 398
P LGKFKDL G+P F T+VH G+ +W D P+D
Sbjct: 381 PKLGKFKDLLFHGLPNWFHTVVHAGTLSWFDTPLD 415
>AT4G12560.2 | Symbols: | F-box family protein |
chr4:7441815-7443157 FORWARD
Length = 413
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 172/401 (42%), Gaps = 63/401 (15%)
Query: 16 LPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFPI 75
+P +IV DI RLP +LV+ + + K L DP+ + +L ++ L++ +
Sbjct: 4 IPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGAL 63
Query: 76 RNQLYFIDFAADQEKDKVKRLNAPFWPVMPEFDVVGSCNSLLCLVDSLYHDSVYIYNPFS 135
R LY +D + D V + P P +V GS N L+ L +S + ++NP +
Sbjct: 64 R--LYSVDLDS---LDSVSDVEHPMKRGGPT-EVFGSSNGLIGLSNS--PTDLAVFNPST 115
Query: 136 RNYLELP-KSLNYLDQE-----VVFGFGYDPRSXXXXXXXXXXXR--NXXXXXXXYPRAR 187
R LP S++ D V +G GYD S + + +P
Sbjct: 116 RQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPY-- 173
Query: 188 RLVYTQSEVQILTLGDREWRSLGKIA-----------YQLVRRPAEALVGGRLHWVSRPR 236
EV++ +L W+ + +A + L RR L G LHWV PR
Sbjct: 174 -------EVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWV-LPR 225
Query: 237 RYNPV--RRIISFDLADEKFEEVQKPEC--GGLSKRNYHLVVLKGCLSAGVYCNYGR--I 290
R + I+ FDLA E+FE V+ PE G + VL GCL + CNY + +
Sbjct: 226 RPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLC--LMCNYDQSYV 283
Query: 291 EIWVMKEYNVKESWVKEYSIGSYMPKGLKQ-NLERPFLKIWKNSXXXXXXXXXXXXXNGE 349
++W+MKEYNV++SW K +++ PK +K + RP + +
Sbjct: 284 DVWMMKEYNVRDSWTKVFTVQK--PKSVKSFSYMRPLV---------------YSKDKKK 326
Query: 350 VLLEYKSRILVSYDPNLGKFKDLSLQGIPKLFQTIVHVGSF 390
VLLE + LV +D K L ++ P + + V S
Sbjct: 327 VLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAELVVSSL 367
>AT4G12560.1 | Symbols: | F-box family protein |
chr4:7441815-7443157 FORWARD
Length = 413
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 172/401 (42%), Gaps = 63/401 (15%)
Query: 16 LPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFPI 75
+P +IV DI RLP +LV+ + + K L DP+ + +L ++ L++ +
Sbjct: 4 IPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGAL 63
Query: 76 RNQLYFIDFAADQEKDKVKRLNAPFWPVMPEFDVVGSCNSLLCLVDSLYHDSVYIYNPFS 135
R LY +D + D V + P P +V GS N L+ L +S + ++NP +
Sbjct: 64 R--LYSVDLDS---LDSVSDVEHPMKRGGPT-EVFGSSNGLIGLSNS--PTDLAVFNPST 115
Query: 136 RNYLELP-KSLNYLDQE-----VVFGFGYDPRSXXXXXXXXXXXR--NXXXXXXXYPRAR 187
R LP S++ D V +G GYD S + + +P
Sbjct: 116 RQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPY-- 173
Query: 188 RLVYTQSEVQILTLGDREWRSLGKIA-----------YQLVRRPAEALVGGRLHWVSRPR 236
EV++ +L W+ + +A + L RR L G LHWV PR
Sbjct: 174 -------EVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWV-LPR 225
Query: 237 RYNPV--RRIISFDLADEKFEEVQKPEC--GGLSKRNYHLVVLKGCLSAGVYCNYGR--I 290
R + I+ FDLA E+FE V+ PE G + VL GCL + CNY + +
Sbjct: 226 RPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLC--LMCNYDQSYV 283
Query: 291 EIWVMKEYNVKESWVKEYSIGSYMPKGLKQ-NLERPFLKIWKNSXXXXXXXXXXXXXNGE 349
++W+MKEYNV++SW K +++ PK +K + RP + +
Sbjct: 284 DVWMMKEYNVRDSWTKVFTVQK--PKSVKSFSYMRPLV---------------YSKDKKK 326
Query: 350 VLLEYKSRILVSYDPNLGKFKDLSLQGIPKLFQTIVHVGSF 390
VLLE + LV +D K L ++ P + + V S
Sbjct: 327 VLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAELVVSSL 367
>AT3G23880.1 | Symbols: | F-box family protein |
chr3:8622061-8623155 REVERSE
Length = 364
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 137/316 (43%), Gaps = 45/316 (14%)
Query: 14 EDLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNL-VSHYL------SSTIKKDPC 66
+LP E++ +IL RLP+ SL +FKCVC SWR+L + + H L ++T K P
Sbjct: 12 HNLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPY 71
Query: 67 LVL-----HCDFPIRNQLYFIDFAADQEKDKVKRLNAPFWPVMPEFDVVGSCNSLLCL-V 120
V+ H + LY E D + L + + VVG+C+ L+C V
Sbjct: 72 GVITTSRYHLKSCCIHSLYNASTVYVSEHDG-ELLGRDY------YQVVGTCHGLVCFHV 124
Query: 121 DSLYHDSVYIYNPFSRNYLELPKS-LNYLDQE--VVFGFGYDPRSXXXXXXXXXXXRNXX 177
D Y S+Y++NP + L S L D E V +GFGYD R+
Sbjct: 125 D--YDKSLYLWNPTIKLQQRLSSSDLETSDDECVVTYGFGYDESEDDYKVVALLQQRHQ- 181
Query: 178 XXXXXYPRARRLVYTQSEVQILTLGDREWRSLGKIAYQLV---RRPAEALVGGRLHWVSR 234
+ E +I + + WRS +V + + + G L+
Sbjct: 182 --------------VKIETKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYINGTLN--WA 225
Query: 235 PRRYNPVRRIISFDLADEKFEEVQKPECGGLSKRNYHLVVLKGCLSAGVYCNYGRIEIWV 294
+ IIS+D++ ++F+E+ P C G L L+GCLS YC ++WV
Sbjct: 226 ATSSSSSWTIISYDMSRDEFKELPGPVCCGRGCFTMTLGDLRGCLSMVCYCKGANADVWV 285
Query: 295 MKEYNVKESWVKEYSI 310
MKE+ SW K SI
Sbjct: 286 MKEFGEVYSWSKLLSI 301
>AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD
Length = 427
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 143/341 (41%), Gaps = 72/341 (21%)
Query: 16 LPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFPI 75
LP EI+ +IL RLP S+ +F+CV K + TL+ DP +L ++ + LH +
Sbjct: 36 LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIV 95
Query: 76 RNQ-LYFIDF----------AADQEKDKVKRLNAPFWPVMPEF----------------- 107
+ LY +DF AA + +K + F ++ +
Sbjct: 96 SSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNA 155
Query: 108 --------DVVGSCNSLLCLVDSLYHDSVYIYNPFSRNYLELP-----KSLNY-LDQEVV 153
++VGS N L+C+ S +V++YNP + + LP KS+ Y D
Sbjct: 156 KSYRRNWVEIVGSSNGLVCI--SPGEGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQT 213
Query: 154 FGFGYDPRSXXXXXXXXXXXRNXXXXXXXYPRARRLVYTQSEV---QILTLGDREWRSLG 210
+GFG+D + + +LV T ++ + +L WR +
Sbjct: 214 YGFGFDGLTDDY-------------------KLVKLVATSEDILDASVYSLKADSWRRIC 254
Query: 211 KIAYQLVRRPAEALV--GGRLHWVSRPRRYNPVRRIISFDLADEKFEEVQKP-ECGGLSK 267
+ Y+ + V G +HWV R+N R +++FD+ E+F E+ P E S
Sbjct: 255 NLNYEHNDGSYTSGVHFNGAIHWVFTESRHNQ-RVVVAFDIQTEEFREMPVPDEAEDCSH 313
Query: 268 RNYHLVV--LKGCLSAGVYCNYGRIEIWVMKEYNVKESWVK 306
R + VV L G L C +IWVM EY +SW +
Sbjct: 314 RFSNFVVGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSR 354
>AT4G09190.1 | Symbols: | F-box family protein |
chr4:5855176-5856327 FORWARD
Length = 383
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 140/303 (46%), Gaps = 39/303 (12%)
Query: 14 EDLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDF 73
E +P +++ +I+S LP S+V+F+ V K W ++ P+ S ++ ++ PC++L F
Sbjct: 20 EHIPLDLIVEIVSSLPAKSIVRFRSVSKLWSSIITTPDFTSSVVTRSLSSRPCVLL--IF 77
Query: 74 PIRNQLYFIDFAADQEKDKVKRLNAPFWPVMPEFDVVGSCNSLLCLVD-SLYHDSVYIYN 132
++L+F FA+ + K F +P + C S+ L+ + ++I N
Sbjct: 78 QKHDKLFF--FASPVHQKKTCPNVENFQYTIPNNGKLQRCESVHGLIYLETSTNVMFIRN 135
Query: 133 PFSRNYLELPKSLNYLDQEVVFGF-GYDPRSXXXXXXXXXXXRNXXXXXXXYPRARRLVY 191
P ++++ LPK L+ + + GF GYDP + RN
Sbjct: 136 PITKSFFTLPK-LDSKEGRPLTGFLGYDPINGKYKVLCILKERN---------------- 178
Query: 192 TQSEVQILTLGDRE-WRSLGK--IAYQLVRRPAEALVGGRLHWVSRPRRYNPVRRIISFD 248
++ ILTLG +E WR L K +++ V A+ + G + S I+SFD
Sbjct: 179 ---KIGILTLGAQESWRILSKGFLSHYKVTGYAKCIDGVIYYEGSFGDGLRQELAIMSFD 235
Query: 249 LADEKFEEVQKPECGGLSK--RNYH-LVVLKGCLSAGVYCNYGRIEIWVMKEYNVKESWV 305
L EKF ++ P+ ++ +Y + L +++GV +W++++ + + W+
Sbjct: 236 LRSEKFSLIKHPKKSSIATCWSSYEGRLALVSSIASGV-------SLWILEDADNHKQWI 288
Query: 306 KEY 308
++
Sbjct: 289 YKH 291
>AT1G32420.1 | Symbols: | F-box family protein |
chr1:11701995-11702903 FORWARD
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 132/312 (42%), Gaps = 48/312 (15%)
Query: 6 RRRINANFE----DLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQD-----PNLVSHY 56
RR+I+A + ++P ++ +IL +LP SL++F+CV K W ++ ++V+
Sbjct: 23 RRKISAGEKSGNVNIPLDLTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRS 82
Query: 57 LSSTIKKDPCLVLHCDFPIRNQLYFI---DFAADQEKDKVKRLNAPFWPVMPEFDVVGSC 113
L+ +D L+ H +FI + + +K+ + + + V
Sbjct: 83 LTQPPPRDIKLIFHHQVLYPGPHFFIFSSTYPQNTDKESLTTRASSYHYV---------- 132
Query: 114 NSLLCLVDSLYHDSVYIYNPFSRNYLELPKSLNYLDQEVVFGFGYDPRSXXXXXXXXXXX 173
L+C S +V IYNP +R Y +P + Y E F FGYDP
Sbjct: 133 RGLICCW-SHCPTTVDIYNPTTRQYYTVPDTNRYQYIETCF-FGYDPVENQYKVMVLP-- 188
Query: 174 RNXXXXXXXYPRARRLVYTQSEVQILTLGD---REWRSLGKIAYQLVRRPAEALVGGRLH 230
+ +S Q+ T+GD + WR + I + + A + G +
Sbjct: 189 --------------KYYMEESPCQVFTVGDPIEKPWRDIQGIGVHFLLKDAVCING--VI 232
Query: 231 WVSRPRRYNPVRRIISFDLADEKFEEVQKPECGGLSKRNYHLVVLKGCLSAGVYCNYGRI 290
+ Y ++SFD+ EKF V+ P+ L+ L+ +G L + C G +
Sbjct: 233 YYQATNEYGSTYFLVSFDVRSEKFNHVKAPKI--LTDHPCTLINYQGKLGLIMCCKKG-L 289
Query: 291 EIWVMKEYNVKE 302
EIWVM++ K+
Sbjct: 290 EIWVMEDAEKKQ 301
>AT5G50220.1 | Symbols: | F-box family protein |
chr5:20446068-20447200 REVERSE
Length = 357
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 133/308 (43%), Gaps = 57/308 (18%)
Query: 6 RRRINANFEDL--PNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKK 63
+RR + ED+ P +++ +IL +LP SL++F+CV K W ++ SS
Sbjct: 21 QRREVSIAEDIGIPIDLMVEILKKLPAKSLIKFQCVSKQWSSIIG---------SSRDFI 71
Query: 64 DPCLVLHCDFPIRNQLYFIDFAADQEKDKVKRLNAPFWPVMPEFDVVGSCNSLLCLVDSL 123
D + P R+ L I F+ + +K++++ F P+ +L L +
Sbjct: 72 DSIVTRSLSQPSRDIL--ISFSTTLT-NSLKQISSSF-PL----------RTLDILTKNQ 117
Query: 124 YHDSVYIYNPFSRNYLELPKSLNYLDQEVVFGFGYDPRSXXXXXXXXXXXRNXXXXXXXY 183
+ IYNP +R L LP++ GYDP +N
Sbjct: 118 SYTEAAIYNPTTRQSLSLPETTAGHSHVSTSFLGYDP------------FKNQYKVICLD 165
Query: 184 PRARRLVYTQSEVQILTLGD--REWRSLGKIAYQL-VRRP--AEALVGGRLHWVSRPRRY 238
RR + + TLGD R+WR KI Y + P + G +++ + ++Y
Sbjct: 166 NYKRRCCH------VFTLGDAIRKWR---KIQYNFGLYFPLLPPVCIKGTIYY--QAKQY 214
Query: 239 NPVRRIISFDLADEKFEEVQKPECGGLSKRNYHLVVLKGCLSAGVYCNYGRIEIWVMKEY 298
++ FD+ EKF++V+ P+ + Y L+ +G L G C R+EIWVMK
Sbjct: 215 GSTYVLLCFDVISEKFDQVEAPK--TMMDHRYTLINYQGKL--GFMCCQNRVEIWVMKND 270
Query: 299 NVKESWVK 306
K+ W K
Sbjct: 271 EKKQEWSK 278
>AT3G16210.1 | Symbols: | F-box family protein |
chr3:5494533-5495615 REVERSE
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 16 LPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFPI 75
LP E+ +IL RL + L +F+CVCK+WR L DP Y +D F
Sbjct: 5 LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETY------RDMSPAKFVSFYD 58
Query: 76 RNQLYFIDFAADQEKDKVKRLNAPF-WPVMPEFDVVGSCNSLLCLVDSLYHDSVYIYNPF 134
+N Y +D + +L+ P ++ E V C+ LC+ +L + ++ ++NPF
Sbjct: 59 KN-FYMLDVEG-KHPVITNKLDFPLDQSMIDESTCVLHCDGTLCV--TLKNHTLMVWNPF 114
Query: 135 SRNYLELPKSLNYLDQEVVFGFGYDP 160
S+ + +P Y D ++ GFGYDP
Sbjct: 115 SKQFKIVPNPGIYQDSNIL-GFGYDP 139
>AT4G22390.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
F-box associated type 1 (InterPro:IPR017451); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT4G12560.2); Has 662 Blast hits to 662
proteins in 37 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 662; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr4:11813757-11815074 REVERSE
Length = 402
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 136/317 (42%), Gaps = 41/317 (12%)
Query: 15 DLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFP 74
+ P +++ ++ RL ++LV+ + + K +L P VS +L ++ L++ P
Sbjct: 3 ECPTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLETGEHLMILLRGP 62
Query: 75 IRNQLYFIDFAADQEKDKVKRLNAP-FWPVMPEFD-VVGSCNSLLCLVDSLYHDSVYIYN 132
+ +D + + D L A F V F+ V+G CNS + L I+N
Sbjct: 63 RLLRTVELD-SPENVSDIPHPLQAGGFTEVFGSFNGVIGLCNSPVDLA---------IFN 112
Query: 133 PFSRNYLELP-KSLNYLDQE-----VVFGFGYDPRSXXXXXXXXXXXRNXXXXXXXYPRA 186
P +R LP + +++ +++ V +G GYD +
Sbjct: 113 PSTRKIHRLPIEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCK--------LKEG 164
Query: 187 RRLVYTQSEVQILTLGDREWRSLGKI-AYQLV----------RRPAEALVGGRLHWVSRP 235
++ EV++ +L W+ + + +Q++ RR +V LHW+ P
Sbjct: 165 KKKFPCPVEVKVFSLKKNSWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWI-LP 223
Query: 236 RRYNPV--RRIISFDLADEKFEEVQKPECGGLSKRNYHLVVLKGCLSAGVYCNYGRIEIW 293
RR + II +DLA + + P+ + + N + VL GC+ Y Y +++W
Sbjct: 224 RRQGVIAFNAIIKYDLASDDIGVLSFPQELYI-EDNMDIGVLDGCVCLMCYDEYSHVDVW 282
Query: 294 VMKEYNVKESWVKEYSI 310
V+KEY +SW K Y +
Sbjct: 283 VLKEYEDYKSWTKLYRV 299
>AT2G27520.1 | Symbols: | F-box family protein |
chr2:11762061-11763104 FORWARD
Length = 347
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 118/304 (38%), Gaps = 47/304 (15%)
Query: 15 DLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFP 74
DLP ++V +ILSRLP +SL + + CK W L +DP ++ K+D L+L
Sbjct: 5 DLPWDLVDEILSRLPATSLGRLRFTCKRWNALFKDPEFITKQFHKAAKQDLVLMLS---- 60
Query: 75 IRNQLYFIDFAADQEKDKVKRLNAPFWPVMPEFDVVGSCNS-LLCLVDSLYHDSVYIYNP 133
+F +K + P E V CN LLC + + + NP
Sbjct: 61 --------NFGVYSMSTNLKEI-----PNNIEIAQVFHCNGLLLCSTEEGNKTKLVVVNP 107
Query: 134 FS--RNYLELPKSLNYLDQEVVFGFGYDPRSXXXXXXXXXXXRNXXXXXXXYPRARRLVY 191
+ ++E NY + ++ G+G N + R+ Y
Sbjct: 108 CTGQTRWIEPRTDYNY-NHDIALGYG----------------NNSTKKSYDSYKILRITY 150
Query: 192 TQSEVQILTLGDREWRSLGKIAYQLVRRPAEAL-VGGRLHWVSRPRRYNPVRRIISFDLA 250
V+I L WR L K+ + + + G +W+S ++N I+SFD
Sbjct: 151 GCKLVEIFELKSNSWRVLSKVHPNVEKHYYGGVSFKGNTYWLSYT-KFN----ILSFDFT 205
Query: 251 DEKFEEVQKPEC--GGLSKRNYHLVVLKGCLSAGVYCNYGRIEIWVMKEYNVKE--SWVK 306
E F V P G +V + L + G++ IW+ + + + SW K
Sbjct: 206 TETFRSVPLPFLYQDGFVTLALSVVREEQLLLLRSRFDMGQVGIWMCNKIDTETVLSWSK 265
Query: 307 EYSI 310
+++
Sbjct: 266 SFTL 269
>AT1G47790.1 | Symbols: | F-box family protein |
chr1:17600004-17601173 REVERSE
Length = 389
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 130/318 (40%), Gaps = 39/318 (12%)
Query: 15 DLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFP 74
P ++ +IL RLP+ S+V+F+CV K W ++ DP + Y + + + +L C F
Sbjct: 24 SFPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQS--LLFC-FK 80
Query: 75 IRNQLYFIDFAADQEKDKVKRLNA--PFWPVMP-EFDVVGSCNSLLCLVDSLYHDSVYIY 131
++L+ A F +P EF S+ L+ +V ++
Sbjct: 81 QSDKLFVFSIPKHHYDSNSSSQAAIDRFQVKLPQEFSYPSPTESVHGLICFHVLATVIVW 140
Query: 132 NPFSRNYLELPKSLNYLDQEVVFGFGYDPRSXXXXXXXXXXXRNXXXXXXXYPRARRLVY 191
NP R +L LPK + VF GYDP PR R
Sbjct: 141 NPSMRQFLTLPKPRKSWKELTVF-LGYDPIEGKHKVVCL-------------PRNR---- 182
Query: 192 TQSEVQILTLGD--REWRSL-GKIAYQLVRRPAEALVGGRLHWVSRPRRYNPVRRIISFD 248
T E Q+LTLG + WR++ K ++ + G +++++ + V I+SF
Sbjct: 183 TCDECQVLTLGSAQKSWRTVKTKHKHRSTNDTWGRCIKGVVYYIAYV-YHTRVWCIMSFH 241
Query: 249 LADEKFEEVQKPECGGLSKRNYHLVVLK-----GCLSAGVYCNYGRIEIWVMKEYNVKES 303
+ EKF+ ++ P + Y V++ C+ N I +W++++ K
Sbjct: 242 VKSEKFDMIKLP-----LENIYRDVMINYEGRLACVDKLYTLNNDGIRLWILEDAE-KHK 295
Query: 304 WVKEYSIGSYMPKGLKQN 321
W + + Y+ L+ N
Sbjct: 296 WSSKQFLARYVHNDLRTN 313
>AT3G23260.1 | Symbols: | F-box family protein |
chr3:8313334-8314422 FORWARD
Length = 362
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 28/256 (10%)
Query: 13 FEDLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCD 72
+ LP E+ +ILSR+P L + + K W L++ + + S+ K+P +++ D
Sbjct: 3 WRSLPVELQEEILSRVPAKYLARLRSTSKQWNALSKTGSFAKKH-SANATKEPLIIMLKD 61
Query: 73 FPIRNQLYFIDFAADQEKDKVKR---LNAPFWPVMPEFDVVGSCNSLLCLVDSLYHDSVY 129
+++Y + V + L + + P V C+ LL L S+ +++
Sbjct: 62 ----SRVYLASVNLHGVHNNVAQSFELGSRLYLKDPHISNVFHCDGLLLLC-SIKENTLE 116
Query: 130 IYNPFSRNYLELPKSLNYLDQEVVFGFGYDPRSXXXXXXXXXXXRNXXXXXXXYPRARRL 189
++NP S + +Y + + GYD +S R
Sbjct: 117 VWNPCSGEAKLIKPRHSYYKESDFYALGYDNKSSCKKYKVL--------------RVISQ 162
Query: 190 VYTQS----EVQILTLGDREWRSLGKIAYQLVRRPAEALVGGRLHWVSRPRRYNPVRRII 245
V+ Q E +I + WR G +R+ V G +WV R RY P + +
Sbjct: 163 VHVQGDFKIEYEIYDFTNDSWRVHGATTELSIRQKHPVSVKGSTYWVVR-NRYFPYKYFL 221
Query: 246 SFDLADEKFEEVQKPE 261
SFD + E+F+ + P+
Sbjct: 222 SFDFSTERFQSLSLPQ 237
>AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483829
FORWARD
Length = 334
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 112/287 (39%), Gaps = 45/287 (15%)
Query: 5 KRRRINANFEDLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKD 64
KRRR +PNEIV +IL RLP+ SL +F+ V K WRTL +++ K
Sbjct: 28 KRRRKEFEKIHIPNEIVEEILVRLPVKSLTRFQTVSKHWRTLITSKYFGKRHMALEKSKG 87
Query: 65 PCLVLHCDFPIRNQLYFIDFAADQ--------EKDKVKRLNA---PFWPVMPEFDVVGSC 113
L+ CD F+D A D EK V + F D+ SC
Sbjct: 88 CKLLFVCD-------DFVDRAEDTLFLKTVALEKTSVSEGDEQAFEFEGYKGFLDISESC 140
Query: 114 NSLLCLVDSLYHDSVYIYNPFSRNYLELPKSLNYLDQ--------EVVFGFGYDPRSXXX 165
+ L+C D+ +V + NP + ++ELP L+ + Q EV DP
Sbjct: 141 DGLVCFYDTTR--AVEVMNPATTMFIELP--LSRIQQLCIYKPNPEVELEPVQDPNPVLD 196
Query: 166 XXXXXXXXRNXXXXXXXYPRARRLVY-------TQSEVQILTLGDREWRSLGKIA---YQ 215
+ +LV+ T ++L L ++WR + + +Q
Sbjct: 197 PVMTCS---QIGVGKDSVSGSYKLVWMYNTSPATPPTCEVLDLDGKKWRFVNTTSLDHHQ 253
Query: 216 LVRRPAEALVGGRLHWVSRPRR--YNPVRRIISFDLADEKFEEVQKP 260
++ G L+W++ ++I DL E F+ +Q P
Sbjct: 254 ILCDQRPVFANGSLYWLTGDEEGYATTQTKLIVLDLHTEMFQVIQTP 300
>AT4G38870.1 | Symbols: | F-box family protein |
chr4:18132583-18133863 REVERSE
Length = 426
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 25/267 (9%)
Query: 5 KRRRINANFEDLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKD 64
K +++ N E LP +++ +IL +L + L++F CV K W ++ +DP + +L+ ++K+
Sbjct: 42 KFTKVSVNSELLPVDLIMEILKKLSLKPLIRFLCVSKLWASIIRDPYFMKLFLNESLKRP 101
Query: 65 PCLVLHCDFPIRNQLYFIDFAADQEKD--KVKRLNAPFWPVMPEFDVVGSCNSLLCLVDS 122
LV F R Q F++ K ++ ++ + V + + S
Sbjct: 102 KSLV----FVFRAQSLGSIFSSVHLKSTREISSSSSSSSASSITYHVTCYTQQRMTISPS 157
Query: 123 LYH-------DSVYIYNPFSRNYLELPKSLNYLDQEVVFGFGYDPRSXXXXXXXXXXXRN 175
++ S+ IYNP +R + LPK + + + GYDP
Sbjct: 158 VHGLICYGPPSSLVIYNPCTRRSITLPK-IKAGRRAINQYIGYDPLDGNY---------K 207
Query: 176 XXXXXXXYPRARRLVYTQSEVQILTLGDRE--WRSLGKIAYQLVRRPAEALVGGRLHWVS 233
P R E+Q+LTLG R+ WR + I E + G L++ +
Sbjct: 208 VVCITRGMPMLRNRRGLAEEIQVLTLGTRDSSWRMIHDIIPPHSPVSEELCINGVLYYRA 267
Query: 234 RPRRYNPVRRIISFDLADEKFEEVQKP 260
I+SFD+ EKF+ ++ P
Sbjct: 268 FIGTKLNESAIMSFDVRSEKFDLIKVP 294
>AT5G49610.1 | Symbols: | F-box family protein |
chr5:20131448-20132527 REVERSE
Length = 359
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 124/311 (39%), Gaps = 29/311 (9%)
Query: 16 LPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFPI 75
P+E++ IL+RLP+ SL +FK VCKSW L D S + ++K+ +L +
Sbjct: 9 FPDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLSVKEQ---LLVAEVSD 65
Query: 76 RNQLYFIDFAADQEKDKVKRLNAPFWPVMPEFDVVGSCNSLLCLVDSLYHDSVYIYNPFS 135
+ L +D V L+ F V + S N LLC Y+ NP +
Sbjct: 66 SSSLICVD-----NLRGVSELSLDF--VRDRVRIRVSSNGLLCCSSIPEKGVYYVCNPST 118
Query: 136 RNYLELPKSLNYLDQEVVFGFGYDPRSXXXXXXXXXXXRNXXXXXXXYPRARRLVYTQSE 195
R Y +LPKS + V F D + Y R+ S
Sbjct: 119 REYRKLPKS----RERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFGQRPDGSF 174
Query: 196 VQILTLGD-REWRS----LGKIAYQLVRRPAEALVGGRLHWVSRPRRYNPVRRIISFDLA 250
+ ++ + +WR L + ++ + + V G LHW+ Y I++ D+
Sbjct: 175 ICLVFDSESNKWRKFVSVLEECSFTHMSKNQVVFVNGMLHWLMSGLCY-----ILALDVE 229
Query: 251 DEKFEEVQKPE---CGGLSKRNYHLVVLKGCLSAGVYCNYGRIEIWVMKEYNVKESWVKE 307
+ + ++ P+ G +L+ G LS + + ++IW M EY E+W
Sbjct: 230 HDVWRKISLPDEIRIGNGGGNRVYLLESDGFLSV-IQLSDVWMKIWKMSEYET-ETWSVV 287
Query: 308 YSIGSYMPKGL 318
SI KGL
Sbjct: 288 DSISLRCIKGL 298
>AT1G27340.1 | Symbols: | F-box family protein |
chr1:9495741-9497857 FORWARD
Length = 467
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 15/134 (11%)
Query: 13 FEDLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCD 72
+++ P ++ D++SRLP+++ QF+ VC+ W L D + S + + P
Sbjct: 117 WQEFPQDLFEDVVSRLPMATFFQFRAVCRKWNALI-DSDSFSRCFTELPQTIPWF----- 170
Query: 73 FPIRNQLYFIDFAADQEKD-KVKRLNAPFWPVMPEFDVV---GSCNSLLCLVDSLYHDSV 128
+ I ++ + + Q D +K+ + P P +P+ +V S L+C +D + H +
Sbjct: 171 YTITHE----NVNSGQVYDPSLKKWHHPIIPALPKKSIVLPMASAGGLVCFLD-IGHRNF 225
Query: 129 YIYNPFSRNYLELP 142
Y+ NP ++++ ELP
Sbjct: 226 YVSNPLTKSFRELP 239
>AT1G50870.1 | Symbols: | F-box family protein |
chr1:18855147-18856337 FORWARD
Length = 396
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 121/295 (41%), Gaps = 41/295 (13%)
Query: 17 PNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFPIR 76
P +++ +IL RLP+ S+++F+CV K W + T DP + Y + + + L+ F +
Sbjct: 32 PLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEARSSTRPSLLMF---FKNK 88
Query: 77 NQLYFIDFAADQEKDKVKRLNA----PFWPVMPEFDVVGSCNSLLCLVDSLYHDSVYIYN 132
++L+ F + K + + P++ S+ L+ I+N
Sbjct: 89 DKLFVFTFPHHNQNSKETHSYSQHVDSYHIKYPKYCCFPFTESVHGLISFRISTKPIIWN 148
Query: 133 PFSRNYLELPKSLNYLDQEVVFGFGYDPRSXXXXXXXXXXXRNXXXXXXXYPRARRLVYT 192
P R +L LPK VF GYDP T
Sbjct: 149 PTMRQFLILPKPEKSWKGLSVF-LGYDPVEGKHKLMCMNRDN-----------------T 190
Query: 193 QSEVQILTLGDRE--WRSL-GKIAYQLVRRPAEALVGGRLHWVSRPRRY----NPVRRII 245
E ++LTLG + WR + + ++ + R + G +++ + + NP I+
Sbjct: 191 SDECRVLTLGSAQEKWRRIKSNLKHRSILRYYGQCINGVIYYQAYIDQMGFISNPT--IM 248
Query: 246 SFDLADEKFEEVQKPECGGLSKRNYHLVVLKG---CLSAGVYCNYGRIEIWVMKE 297
SF++ EKF+ + P G + L+ +G C++ + G I +W +++
Sbjct: 249 SFEVRSEKFDTITLPS-GSFANM---LIPYQGRLACVNNTMDDVNGGITLWTLED 299
>AT4G17780.1 | Symbols: | F-box family protein |
chr4:9880321-9881455 REVERSE
Length = 347
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 117/299 (39%), Gaps = 28/299 (9%)
Query: 19 EIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFPIRNQ 78
+++ DI RLP+ S++ K V K WR++ + V +S K+ +C +
Sbjct: 16 DLLEDIFLRLPLKSILISKSVSKRWRSILESKTFVERRMSLQKKRKILAAYNCKCGWEPR 75
Query: 79 LYFIDFAADQEKDKVK-RLNAPFWPVMPEFDVVGSCNSLLCLVDSLYHDSVYIYNPFSRN 137
L ++ V NA P F +C+ L+C+++ + D + NP++R
Sbjct: 76 LLPGSSQCKGNEEIVYLHCNA----AQPSF----TCDGLVCILEPRWID---VLNPWTRQ 124
Query: 138 YLELPKSLNYLDQEVVFGFG--YDPRSXXXXXXXXXXXRNXXXXXXXYPRARRLVYTQSE 195
+FG G + PR + + E
Sbjct: 125 LRRYGFGFG-----TIFGVGSAFSPRHWAMGFGKDKVTGSYKVVKMCLISFSEICARDPE 179
Query: 196 VQ--ILTLGDREWRSLGKIAYQLVRRPAEALVGGRLHWVSRPRRYNPVRRIISFDLADEK 253
V+ +L + EWR L Y++ G ++W+ +P I++ DL E+
Sbjct: 180 VEYSVLDVETGEWRMLSPPPYKVFEVRKSECANGSIYWLHKPTER--AWTILALDLHKEE 237
Query: 254 FEEVQKPECGGLSKRNYHLVVLKGCLS-AGVYCNYG-RIEIWVMKEYNVKESWVKEYSI 310
+ P+ +++ + +V L+ L+ A Y ++EIW M E+W K YSI
Sbjct: 238 LHNISVPDM-SVTQETFQIVNLEDRLAIANTYTKTEWKLEIWSMD--TEVETWTKTYSI 293
>AT3G10240.1 | Symbols: | F-box protein-related |
chr3:3166698-3167867 FORWARD
Length = 389
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 9/150 (6%)
Query: 16 LPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDF-- 73
+P ++V +IL RLP S+ +F+CV K W ++T +P ++ + + + C + F
Sbjct: 27 IPLDLVSEILLRLPEKSVARFRCVSKPWSSITTEPYFINLLTTRSPRLLLCFKANEKFFV 86
Query: 74 ---PIRNQLYFIDFAADQEKDKVKRLNAPFWPVMPEFDVVGSCNSLLCLVDSLYHDSVYI 130
P Q + + + R + F M F S N L+C +S + +
Sbjct: 87 SSIPQHRQTFETWNKSHSYSQLIDRYHMEFSEEMNYFPPTESVNGLICFQESA---RLIV 143
Query: 131 YNPFSRNYLELPKSLNYLDQEVVFGFGYDP 160
+NP +R L LPK N ++ GYDP
Sbjct: 144 WNPSTRQLLILPKP-NGNSNDLTIFLGYDP 172
>AT2G17310.1 | Symbols: SON1 | SON1 (SUPPRESSOR OF NIM1-1 1) |
chr2:7531212-7532324 FORWARD
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 28/156 (17%)
Query: 16 LPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFPI 75
LP E+ DILSRLP SLV+F+ V K W +L D ++++LS + P ++ +
Sbjct: 3 LPWELEEDILSRLPPISLVRFRTVSKHWNSLFNDKTFINNHLS---RSRPEFIILTN--- 56
Query: 76 RNQLYFIDFAADQEKDKVKRLNAPFWPVMPEFD-----------VVGSCNSLLCLVDSLY 124
+++Y +D D RL+ +P +D ++ +C+ L +
Sbjct: 57 -SKIYSVDIIDHNNIDPTIRLHE-----IPTYDIHSRGTDLNRTIINTCDEFLFYNYRYW 110
Query: 125 HDSVYIYNPFSRNYLELPKSLNYLDQE-VVFGFGYD 159
+ ++NP+ R + + Y +QE VFG GYD
Sbjct: 111 DNMTALWNPWLRQV----RWIEYANQEFCVFGLGYD 142
>AT5G18160.1 | Symbols: | F-box family protein |
chr5:6002770-6003909 FORWARD
Length = 379
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 115/290 (39%), Gaps = 45/290 (15%)
Query: 16 LPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFPI 75
+P +I +ILSRLP S+V+ + V K W ++T P + H T PC++L
Sbjct: 34 IPLDITIEILSRLPAKSIVRSRSVSKLWSSITTTPEFIKHRSKKT--SPPCVLL----IF 87
Query: 76 RNQLYFIDFAADQEKDKVKRLNAPFWPVMPEFDVV---GSCNSLLCLVDSLYHDSVYIYN 132
R I F++ Q ++ + + +P+ + S + L+CL S + I N
Sbjct: 88 RKHDKLIVFSSPQHQNTYSHVQD-YHIEIPKNGFIRRLDSVHGLICLEGS---KQLVICN 143
Query: 133 PFSRNYLELPKSLNYLDQEVVFGF-GYDPRSXXXXXXXXXXXRNXXXXXXXYPRARRLVY 191
P + + LP+ D+ V GF GY+P N
Sbjct: 144 PTLKRFFPLPEPQGTGDEYNVGGFLGYEPIEGKYKALCIVRGWN---------------- 187
Query: 192 TQSEVQILTLGDRE-WRSLGKIAYQLVRRPAEALVGGRLHWVSRPRRYNPVRRIISFDLA 250
Q+LTL +E WR + + G +++ + P I FDL
Sbjct: 188 ----TQVLTLEIQESWRVTKPGYTHWPTKDTGRCINGVIYYKAIIFDRVPRHVIFGFDLR 243
Query: 251 DEKFEEVQKPECGGLSKRNYH---LVVLKGCLSAGVYCNYGRIEIWVMKE 297
E+F ++ P RNY +V +G L A + +EIW +++
Sbjct: 244 YEEFTHIEFP------MRNYDRFLMVSYEGRL-ALISSTSSVVEIWSLED 286
>AT2G43440.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G43445.1); Has 740
Blast hits to 736 proteins in 32 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 738;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr2:18039326-18040599 FORWARD
Length = 401
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 134/341 (39%), Gaps = 52/341 (15%)
Query: 5 KRRRINANFEDLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKD 64
+ +R N N + E++ DI RLP+ S+++FK V + WR++ + V ++K
Sbjct: 2 EEKRENTNSIYIVPELLEDIFLRLPLKSILKFKTVSRQWRSILESKLFVER--RGNLQKH 59
Query: 65 PCLVL---HCDFPIRNQLYFID-FAADQEKDKVKRLNAPFWPVMPEFDVVGSCNSLLCLV 120
+L +C++ +R ++ F D+E + A P M +C+ LLC+
Sbjct: 60 HRKILAAYNCNYFMRPSIFPESRFEGDEEIVYLHCDAAQ--PSM-------TCDGLLCIT 110
Query: 121 DSLYHDSVYIYNPFS---RNYLELPKSLNYLDQEVVFGFGYDPRSXXXXXXXXXXXRNXX 177
+ + + + NP + R + P + + + GFG D
Sbjct: 111 EPGWFN---VLNPSAGQLRRFPPGPGPVKGPQENWLLGFGRD------------------ 149
Query: 178 XXXXXYPRARRLVYTQSEVQILTLGDREWRSLGKIAYQLVRRPAEALVGGRLHWVSRPRR 237
Y R + E IL + W L + ++ V G ++W+
Sbjct: 150 NVTGRYKIVRMCFHDCYEFGILDIETGVWSKLRSPPHNMLPGSKSVCVNGSIYWLQISAG 209
Query: 238 YNPVRRIISFDLADEKFEEVQKPECGGLSKRNYHLVVLKGCLSAGVYCNYGR---IEIWV 294
Y I++ DL +E + V +++ LV L+ L+ + N G +EIW
Sbjct: 210 Y----IILAMDLHEESYHGVHHLPATWVTQET-QLVNLEDRLAMAMTTNVGPEWILEIWS 264
Query: 295 M----KEYNVKESWVKEYSIGSYMPKGLKQNLE-RPFLKIW 330
M K ++ SW K YSI G + R F +W
Sbjct: 265 MDIEGKGWSKGYSWSKSYSISLAHGVGFSWPWQKRWFTPVW 305
>AT3G57590.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), F-box associated type 3
(InterPro:IPR013187), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G57580.1); Has
891 Blast hits to 856 proteins in 41 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 889;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr3:21330182-21331396 REVERSE
Length = 404
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 60/320 (18%)
Query: 14 EDLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDF 73
E +PN+++ +I SRLP S++ F+ + K W ++ + P +L+ + + L F
Sbjct: 2 EPIPNDLILEIFSRLPAKSVIGFRTLSKHWASMLRSPVFTELFLTRSSNRPRLL-----F 56
Query: 74 PIRNQLYFIDFAADQEKDKVKR-----LNAPFWPVMPEFDVVGSCNSLLCLVDS-LYHD- 126
++ F++ Q +++ ++ + F + F + + LLC D L D
Sbjct: 57 AAERNGEWLFFSSPQPQNRYEKSSHLDYHTKFSGDVSRF-ICSYVSGLLCFPDLWLSKDA 115
Query: 127 SVYIYNPFSRNYLELPKSLNYLDQEVVFGFGYDPRSXXXXXXXXXXXRNXXXXXXXYPRA 186
S I NP + Y LP + Y + GF DP + YP +
Sbjct: 116 SPVICNPTTGMYESLPDLMRYKNARGFLGF--DP-----------IGKQFKVLSEAYPFS 162
Query: 187 RRLVYTQSEVQILTLGDRE--WRS--LGKIAYQLVRRPAEAL-VGGRLHWVSRPRRYNPV 241
+ + +ILTLG E WRS + AY R +E + + G L+++++ P
Sbjct: 163 DQ----REHHEILTLGTEELSWRSNIISCPAYD--RSLSEGICINGVLYYLAQTLGV-PS 215
Query: 242 RRIISFDLADEKFEEV-------QKPECGGLSKRNYHLVVLKGCLSAGVYCNYGR----- 289
II FD+ E+F+ Q + GL NY +G LS G+ YG+
Sbjct: 216 CVIICFDVRSEEFKYFDAGCFNDQLDDTSGLILVNY-----EGKLS-GINWKYGQAGERR 269
Query: 290 ---IEIWVMKEYNVKESWVK 306
+ +WV+++ K WVK
Sbjct: 270 TVELRMWVLEDAE-KHEWVK 288
>AT1G70960.1 | Symbols: | F-box family protein |
chr1:26756253-26757362 FORWARD
Length = 369
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 9 INANFEDLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLV 68
+N +FE LP + +ILSR+P+ L++F CV K W ++ + YL ++K+ L
Sbjct: 2 VNTSFETLPRHMQMEILSRVPLKFLMKFMCVSKKWASIIRGEEFREDYLFQSMKRPRVLF 61
Query: 69 L--HCDF-PIRNQLYFID-FAADQ-----EKDKVKRLNAPFWPVMPEFDVVGSCNSLLCL 119
+ H ++ PI+ + +F + DQ K +++ P V L+C
Sbjct: 62 VIDHREYLPIKPEAFFHSVYQEDQPLLLSGKQRMRTFETPL------VQVFQPIRGLIC- 114
Query: 120 VDSLYHDSVYIYNPFSRNYLELPKSLNYLDQEVVFGFGYD 159
+ + I NP + + LP+ + + FGYD
Sbjct: 115 --QQGYGKIVICNPGLKKFRSLPQIKVHKGAPMRTFFGYD 152
>AT4G19940.1 | Symbols: | F-box family protein |
chr4:10806195-10807430 FORWARD
Length = 411
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 30/299 (10%)
Query: 15 DLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFP 74
++P ++V +IL+RLP SL++FK V K W +L N + L + P L +
Sbjct: 34 EIPFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRNFTNRLLK--LSSPPRLFMCLSSS 91
Query: 75 IRNQLYFIDFAADQEKDKVKRLNAPF------WPVMPEFDVVGSCNSLLCLVDSLYHDSV 128
+ L + + D +++ P M + + L+CLV S
Sbjct: 92 DNSHLKTVLLSLSSPPDSDITMSSSVIDQDLTMPGMKGYQISHVFRGLMCLVKK---SSA 148
Query: 129 YIYNPFSRNYLELPK-------SLNYLDQEVVFGFGYDPRSXXXXXXXXXXXRNXXXXXX 181
IYN +R + LP + + +++++ G+DP +
Sbjct: 149 QIYNTTTRQLVVLPDIEESTILAEEHKSKKIMYHIGHDPVYDQYKVVCIVSRASDEVEEY 208
Query: 182 XYPRARRLVYTQSEVQILTLGDREWRSLGKIAYQLVRRPAEALVGGRLHWVSRPRRYNPV 241
+ ++ + E G R WR + V + GR+H+++ R +
Sbjct: 209 TFLSEHWVLLLEGE------GSRRWRKISCKYPPHVPLGQGLTLSGRMHYLAWVRVSDN- 261
Query: 242 RRIISFDLADEKFEEVQKPECGGLSKRNYHLVVLKGCLSAGVYCNY---GRIEIWVMKE 297
R ++ FD E+F +Q P G + + L+ G ++ Y G +E+WV+++
Sbjct: 262 RVLVIFDTHSEEFSMLQVP--GDIFWKYNGLLEYGGKIAILNYTKVDIEGVMELWVVED 318
>AT3G20690.1 | Symbols: | F-box protein-related |
chr3:7231570-7232682 REVERSE
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 23/161 (14%)
Query: 15 DLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYL---SSTIKKDPCLVLHC 71
DLP+++V +ILSRLP+ SL + CK+W L++ + + ++ +++ K+D ++ C
Sbjct: 5 DLPHDLVEEILSRLPLISLKAMRSTCKTWNVLSKHRSFANKHIGNVTASGKRDLIMIKDC 64
Query: 72 DF--------PIRNQLYFIDFAADQEKD-KVKRLNAPFWPVMPEFDVVGSCNSLLCLVDS 122
I+N ID + + ++ L+ F + F CN LL L S
Sbjct: 65 KVYSIGVNLHGIQNNNNIIDLSIKNKGILHLENLDLIFKEIFNVF----HCNGLLLLYGS 120
Query: 123 LYHDSV--YIYNPF--SRNYLELPKSLNYLDQEVVFGFGYD 159
+ DS+ + NP+ R +++ + D+ FGYD
Sbjct: 121 ITDDSIRLVVCNPYWGKREWVKRINNFASFDK---LAFGYD 158
>AT3G18910.1 | Symbols: | F-box family protein |
chr3:6521760-6522926 FORWARD
Length = 388
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 14 EDLPNEIVYDILSRLPISSLVQFKCVCKSW-RTLTQDPNLVSHYLSSTIKKDPCLVLHCD 72
E LPN++V +IL R+P +SL + + CK+W R D L S + + K+ L L D
Sbjct: 6 EQLPNDLVEEILCRVPATSLRRLRSTCKAWNRLFKGDRILASKHFEKSAKQFRSLSLRND 65
Query: 73 ---FPIRNQLY----FIDFAADQEKDKVKRLNAPFWPVMPEFDVVGSCNSLLCLVDSLYH 125
FPI L+ ++ ++ K APF E V C LL L
Sbjct: 66 YRIFPISFNLHGNSPSLELKSELIDPHSKNSAAPF-----EISRVIHCEGLLLCSSQLDE 120
Query: 126 DSVYIYNPFS 135
V ++NP +
Sbjct: 121 SRVVVWNPLT 130
>AT4G19930.1 | Symbols: | F-box family protein |
chr4:10803558-10804853 FORWARD
Length = 431
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 47/271 (17%)
Query: 16 LPNEIVYDILSRLPISSLVQFKCVCKSW------RTLTQD----PNLVSH------YLSS 59
+P ++V +IL+RLP SL++FK V K W RT T P+ + +L +
Sbjct: 43 IPFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRTFTNRLLRVPSFIQRLYVTLTFLDN 102
Query: 60 TIKKDPCLVLHCDFPIRNQLYFIDFAADQEKDKVKRLNAPFWPVMPEFDVVGSCNSLLCL 119
++++ L+ P + F D++ P M + + L+C
Sbjct: 103 SLQRKSKLLSSSSSPGSDISTMSSFVVDRDLTT---------PSMKGYYLSHVLRGLMCF 153
Query: 120 VDSLYHDSVYIYNPFSRNYLELPK-------SLNYLDQEVVFGFGYDPRSXXXXXXXXXX 172
V SV IYN +R + LP + ++ ++++++ G+DP
Sbjct: 154 VK---EPSVKIYNTTTRQLVVLPDIEESNIIAEDHKNKKIMYRIGHDPVGDQYKVVCIVA 210
Query: 173 XRNXXXXXXXYPRARRLVYTQSEVQILTLGDREWRSLGKIAYQLVRRPAEAL--VGGRLH 230
N + RR + SE + LG + KI P + + GR+H
Sbjct: 211 RPN-----DEFGELRRYL---SEHWVFILGGDKSSGWRKIPCPSPHLPITQILSINGRMH 262
Query: 231 WVSRPRRYNPVRRIISFDLADEKFEEVQKPE 261
+++ ++++P+ +++FD + E+ +Q PE
Sbjct: 263 YLAWVQKFDPM--LVTFDFSSEEISILQAPE 291
>AT5G36200.1 | Symbols: | F-box family protein |
chr5:14244106-14246296 REVERSE
Length = 471
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 15 DLPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTI--KKDPCLVL 69
DLPN++V +I+SR+P+ S+ CK+W TL+ D + TI K++ CLV+
Sbjct: 5 DLPNDLVEEIISRVPVKSIRAVSSTCKNWNTLSNDHSFTRKLFGKTITTKENECLVV 61
>AT1G14315.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: glyoxal oxidase-related (TAIR:AT1G14430.1). |
chr1:4886861-4887933 REVERSE
Length = 303
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 16 LPNEIVYDILSRLPISSLVQFKCVCKSWR-TLTQDPNLVSHYLSSTIKKDPCLVLHCDFP 74
LP++ V DIL R+P+ SL++FK CK W+ T+ + S KD LVL + P
Sbjct: 4 LPHDTVEDILERVPVKSLLRFKSACKQWKLTIESQYFQAKQLICSAGGKDLNLVLVSEVP 63
Query: 75 IRNQL-YFIDFAADQEKDKVKRLNAPFWPVMPEFDVVGSCNSLLCLVDSLYHDSVYIYNP 133
L + + + K V +++ + + F SC+ L+CL D +++ +YNP
Sbjct: 64 STLVLPHHVTADSPPLKTNVLLISSERYHIYQLFH--NSCDGLVCLFDYQTLNNI-VYNP 120
Query: 134 FSRNYLELPKS 144
+R + P S
Sbjct: 121 ATRWHRRFPVS 131
>AT3G21120.1 | Symbols: | F-box family protein |
chr3:7406326-7407429 FORWARD
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 108/277 (38%), Gaps = 43/277 (15%)
Query: 16 LPNEIVYDILSRLPISSLVQFKCVCKSWRTLTQDPNLVSHYLSSTIKKDPCLVLHCDFPI 75
LP ++V +ILS++P SL +F+ C+ W L D + + + ++ P +++ +F
Sbjct: 3 LPEDLVLEILSKVPAVSLARFRSTCRRWNALVVDGSFAKKHYAYGPRQYPIVIMLIEF-- 60
Query: 76 RNQLYFIDFAADQEKDKVK--------RLNAPFWPVMPEFDVVGS--CNSLL--CLVDSL 123
R L ID + L P E D+ + C+ LL C D
Sbjct: 61 RVYLVSIDLHGINNNNGAPSAKLTGQFSLKDPLSNSSEEVDIRNAFHCDGLLLCCTKDR- 119
Query: 124 YHDSVYIYNPFSRNYLELPKSLNYLDQEVVFGFGYDPRSXXXXXXXXXXXRNXXXXXXXY 183
+ ++NP S + +Y + + ++ GYD RS N
Sbjct: 120 ---RLVVWNPCSGETKWIQPRNSYKESD-LYALGYDNRSSSYKILRMHPVGNPF------ 169
Query: 184 PRARRLVYTQSEVQILTLGDREWRSLGKIA-YQLVRRPAEAL-VGGRLHWVSRPRRY--- 238
E ++ WRS+G + + + + V G +W + + +
Sbjct: 170 ---------HIESEVYDFASHSWRSVGVTTDFHIQTNESYGMNVKGTTYWFALSKDWWSS 220
Query: 239 NPVRRIISFDLADEKFEEVQKPECGGLSKRNYHLVVL 275
+ R ++SFD + E+F+ + P +N HL V+
Sbjct: 221 DDRRFLLSFDFSRERFQCLPLPA----DVKNLHLTVV 253