Jatropha Genome Database

JcCA0274731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0274731.10 - phase: 1 /partial
         (143 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33320.1 | Symbols:  | C2 domain-containing protein | chr2:14...   109   5e-25
AT1G04540.1 | Symbols:  | C2 domain-containing protein | chr1:12...   108   1e-24
AT2G13350.1 | Symbols:  | C2 domain-containing protein | chr2:55...    79   1e-15

>AT2G33320.1 | Symbols:  | C2 domain-containing protein |
           chr2:14119526-14121334 REVERSE
          Length = 602

 Score =  109 bits (273), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 98/158 (62%), Gaps = 23/158 (14%)

Query: 9   ILTESELGPSPSEVVAAMIKNKLRIEEMESEIIGSWSL--ESSMEGLHSKLERWQIEASS 66
           +LTESELGPSPSEV   M K + +  E ES I+  WSL  +S++EGL SKLERW+ E   
Sbjct: 445 VLTESELGPSPSEVAQKMAKERSQAYETESSILSEWSLDDDSNIEGLRSKLERWRTELPP 504

Query: 67  VYD------HSDISS--LIRSSVVSGGSG----PYM---HHRRHSEGDG-GVFSCFGSVC 110
           +YD       SD+ S  ++ ++V  G S     P +   H+RRH+EG G G+FSCF ++C
Sbjct: 505 LYDLGSSHQSSDVGSGAMVVANVGGGKSSRKKTPAVKKKHNRRHTEGGGNGLFSCFSNLC 564

Query: 111 GVQCSIVCG----RSSAKKRNRSGK-RRNPSVDGLSFL 143
           GV+C+ VCG    +  +KK+  SG+  R  S D LS+L
Sbjct: 565 GVECTFVCGGGSDQDGSKKKGGSGRLPRLGSADDLSYL 602


>AT1G04540.1 | Symbols:  | C2 domain-containing protein |
           chr1:1237256-1239061 FORWARD
          Length = 601

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 87/161 (54%), Gaps = 30/161 (18%)

Query: 9   ILTESELGPSPSEVVAAMIKNKLRIEEMESEIIGSWSL-ESSMEGLHSKLERWQIEASSV 67
           ILTESELGPSPSEV   + K+  R  E ES I+  WS+ ESS+EGL SKLERW+ E   +
Sbjct: 445 ILTESELGPSPSEVADKLAKD--RSHETESSILSEWSIDESSIEGLRSKLERWRTELPPL 502

Query: 68  YDHSDISSLIRSSVVSGGSGPYM-----------------HHRRHSEGDGGVFSCFGSVC 110
           YD    SS I S+   G S P                   H+RRH++G  G+FSCF  +C
Sbjct: 503 YDIG--SSHISSTDYDGASVPAATAGGGMSSRRKTPTTKKHNRRHTDGGNGLFSCFSKIC 560

Query: 111 GVQCSIVCG--------RSSAKKRNRSGKRRNPSVDGLSFL 143
           GV+CS VCG          S KK      +R  S D LSF+
Sbjct: 561 GVECSFVCGGGGGPMVSEGSTKKGGAGRVQRTYSADDLSFV 601


>AT2G13350.1 | Symbols:  | C2 domain-containing protein |
           chr2:5536525-5537730 REVERSE
          Length = 401

 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 72/141 (51%), Gaps = 25/141 (17%)

Query: 7   PSILTESELGPSPSEVVAAMIKNK-LRIEEMESEIIGSWSLESSMEGLHSKLERWQIEAS 65
           P ++TES+LGPS S V A + K K L  ++ ES +I     E S+EGL SKLERWQ    
Sbjct: 253 PIVITESDLGPSASVVAAQIAKEKALTGKDAESTVISVG--ERSVEGLRSKLERWQANLP 310

Query: 66  SVYD-------HSDISS---------------LIRSSVVSGGSGPYMHHRRHSEGDGGVF 103
            V D        SD  +               + R+  + G        R    GD G+F
Sbjct: 311 VVLDVGSSYQPSSDYKTNSNFNPKSSYKPNEIVPRNPQMIGAPIQKPSGRNKKSGDNGLF 370

Query: 104 SCFGSVCGVQCSIVCGRSSAK 124
           SCFG++CG++CSIVCG SS +
Sbjct: 371 SCFGNICGIECSIVCGGSSGQ 391