Jatropha Genome Database

JcCA0274511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0274511.10 + phase: 0 /partial
         (121 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G27380.1 | Symbols: GSH2, GSHB | GSH2 (GLUTATHIONE SYNTHETASE...   167   2e-42

>AT5G27380.1 | Symbols: GSH2, GSHB | GSH2 (GLUTATHIONE SYNTHETASE
           2); glutathione synthase | chr5:9668211-9670912 REVERSE
          Length = 539

 Score =  167 bits (422), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 78/104 (75%), Positives = 92/104 (88%)

Query: 17  GNNIYGDDVKENLLRLQREGSEEDAAYILMQRIFPAVSPALLVRNGICHKDHAISELGIY 76
           GNNIYGDDV+ENLLRLQ+EG E +AAYILMQRIFP VS   LVR G+ HK  AISELG+Y
Sbjct: 435 GNNIYGDDVRENLLRLQKEGEEGNAAYILMQRIFPKVSNMFLVREGVYHKHQAISELGVY 494

Query: 77  SAYLRNKDKVIINDKSGYLVRTKVASSNEGGVAAGFAVLDSVYL 120
            AYLR+KD+VI+N++SGYL+RTK+ASS+EGGVAAGF VLDS+YL
Sbjct: 495 GAYLRSKDEVIVNEQSGYLMRTKIASSDEGGVAAGFGVLDSIYL 538