Jatropha Genome Database

JcCA0273631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0273631.10 - phase: 0 
         (272 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42390.1 | Symbols:  | protein kinase C substrate, heavy chai...   197   6e-51
AT5G56360.1 | Symbols:  | calmodulin-binding protein | chr5:2282...   149   1e-36

>AT2G42390.1 | Symbols:  | protein kinase C substrate, heavy
           chain-related | chr2:17651381-17652509 REVERSE
          Length = 212

 Score =  197 bits (501), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 88/118 (74%), Positives = 102/118 (86%)

Query: 20  AFYFLVPSAHSKAPLIGVHPLDEKYFSSRLIKCKDGSKSFPRDSLNDNFCDCVDGTDEPG 79
           +   +V S  S +PL+GVHPLDEKYF S +IKCKDGSKSF RD LNDNFCDC+DGTDEPG
Sbjct: 11  SLAVVVISVASTSPLVGVHPLDEKYFDSDVIKCKDGSKSFTRDRLNDNFCDCLDGTDEPG 70

Query: 80  TSACPRGKFYCQNLGSKPQFIFSSHVNDRICDCCDGSDEYDSGINCPNTCIMGGNLEY 137
           TSACP GKFYC+N+GS P+F++SS VNDRICDCCDGSDEY+S I+CPNTCIMGGN+ Y
Sbjct: 71  TSACPNGKFYCRNIGSSPKFVYSSRVNDRICDCCDGSDEYESSIHCPNTCIMGGNVNY 128


>AT5G56360.1 | Symbols:  | calmodulin-binding protein |
           chr5:22823586-22827950 REVERSE
          Length = 647

 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 68/102 (66%), Positives = 77/102 (75%), Gaps = 1/102 (0%)

Query: 33  PLIGVHPLDEKYF-SSRLIKCKDGSKSFPRDSLNDNFCDCVDGTDEPGTSACPRGKFYCQ 91
           P +G+ P DEKY+ SS  IKCKDGSK F +  LND+FCDC DGTDEPGTSACP GKFYC+
Sbjct: 36  PFLGISPQDEKYYKSSSEIKCKDGSKKFTKAQLNDDFCDCSDGTDEPGTSACPTGKFYCR 95

Query: 92  NLGSKPQFIFSSHVNDRICDCCDGSDEYDSGINCPNTCIMGG 133
           N G  P  +FSS VND ICDCCDGSDEYD  ++C NTC   G
Sbjct: 96  NAGHSPVILFSSRVNDGICDCCDGSDEYDGHVSCQNTCWEAG 137