Jatropha Genome Database

JcCA0270791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0270791.10 + phase: 0 /partial
         (188 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67940.1 | Symbols: ATNAP3 | ATNAP3; transporter | chr1:25477...   174   4e-44
AT5G46540.1 | Symbols: PGP7 | PGP7 (P-GLYCOPROTEIN 7); ATPase, c...    53   9e-08
AT4G18050.1 | Symbols: PGP9 | PGP9 (P-GLYCOPROTEIN 9); ATPase, c...    50   9e-07
AT3G28360.1 | Symbols: PGP16 | PGP16 (P-GLYCOPROTEIN 16); ATPase...    49   2e-06
AT4G01830.1 | Symbols: PGP5 | PGP5 (P-GLYCOPROTEIN 5); ATPase, c...    47   6e-06
AT1G02520.1 | Symbols: PGP11 | PGP11 (P-GLYCOPROTEIN 11); ATPase...    47   6e-06
AT3G62150.1 | Symbols: PGP21 | PGP21 (P-GLYCOPROTEIN 21); ATPase...    47   7e-06
AT1G27940.1 | Symbols: PGP13 | PGP13 (P-GLYCOPROTEIN 13); ATPase...    47   7e-06
AT2G47000.1 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ABCB4 (ATP BI...    47   8e-06

>AT1G67940.1 | Symbols: ATNAP3 | ATNAP3; transporter |
           chr1:25477805-25478667 FORWARD
          Length = 263

 Score =  174 bits (440), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 92/175 (52%), Positives = 109/175 (62%), Gaps = 5/175 (2%)

Query: 14  DGDPREHLFTVDDFESDIGGSQIKFRIKNLIKKSDAGVTILNGINLDXXXXXXXXXXXXX 73
           DG  REHL  V      + GS+ K R+ +L + +D G  IL G+ +D             
Sbjct: 10  DGSLREHLVDVV-----VSGSEPKIRVHDLTRVADDGSRILKGVTIDIPKGMIVGVIGPS 64

Query: 74  XXXXSTLLRSLNRLWEPPSGTVFXXXXXXXXXXXXXXXXXXXMLFQVPALFEGTVADNIR 133
               ST LRSLNRLWEPP  TVF                   MLFQ+P LF+GTVADN+R
Sbjct: 65  GSGKSTFLRSLNRLWEPPESTVFLDGEDITNVDVIALRRRVGMLFQLPVLFQGTVADNVR 124

Query: 134 YGPQLRGKKLTDHEVHKLLKLADLDSTFHKKNGSELSVGQAQRVALARTLANEPE 188
           YGP LRG+KL+D EV+KLL LADLD++F KK G+ELSVGQAQRVALARTLANEPE
Sbjct: 125 YGPNLRGEKLSDEEVYKLLSLADLDASFAKKTGAELSVGQAQRVALARTLANEPE 179


>AT5G46540.1 | Symbols: PGP7 | PGP7 (P-GLYCOPROTEIN 7); ATPase,
           coupled to transmembrane movement of substances |
           chr5:18877192-18882347 REVERSE
          Length = 1248

 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 14/121 (11%)

Query: 78  STLLRSLNRLWEPPSGTVFXXXXXXXXXXXXXXXXXXXMLFQVPALFEGTVADNIRYGPQ 137
           ST++  + R ++P SG V                    ++ Q P LF  T+ +NI YG  
Sbjct: 399 STVISLIERFYDPESGEVLIDGIDLKKFQVKWIRSKIGLVSQEPILFATTIRENIVYGK- 457

Query: 138 LRGKKLTDHEVHKLLKLADLDSTFHK----------KNGSELSVGQAQRVALARTLANEP 187
              K  +D E+   LKLA+  +   K          ++G++LS GQ QR+A+AR +   P
Sbjct: 458 ---KDASDQEIRTALKLANASNFIDKLPQGLETMVGEHGTQLSGGQKQRIAIARAILKNP 514

Query: 188 E 188
           +
Sbjct: 515 K 515


>AT4G18050.1 | Symbols: PGP9 | PGP9 (P-GLYCOPROTEIN 9); ATPase,
           coupled to transmembrane movement of substances |
           chr4:10022205-10027280 FORWARD
          Length = 1236

 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 16/122 (13%)

Query: 78  STLLRSLNRLWEPPSGTVFXXXXXXXXXXXXXXXXXXXMLFQVPALFEGTVADNIRYGPQ 137
           ST++  + R ++P SG V                    ++ Q P LF  T+ +NI YG +
Sbjct: 397 STVISLIERFYDPESGQVLIDNIDLKKLQLKWIRSKIGLVSQEPVLFATTIKENIAYGKE 456

Query: 138 LRGKKLTDHEVHKLLKLAD-----------LDSTFHKKNGSELSVGQAQRVALARTLANE 186
                 TD E+   ++LA+           LD T   ++G+++S GQ QR+A+AR +   
Sbjct: 457 ----DATDQEIRTAIELANAAKFIDKLPQGLD-TMVGEHGTQMSGGQKQRLAIARAILKN 511

Query: 187 PE 188
           P+
Sbjct: 512 PK 513


>AT3G28360.1 | Symbols: PGP16 | PGP16 (P-GLYCOPROTEIN 16); ATPase,
            coupled to transmembrane movement of substances |
            chr3:10611071-10616301 REVERSE
          Length = 1228

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 12/120 (10%)

Query: 78   STLLRSLNRLWEPPSGTVFXXXXXXXXXXXXXXXXXXXMLFQVPALFEGTVADNIRYGPQ 137
            ST++  + R ++P  G V                    ++ Q P LF GT+ +NI YG  
Sbjct: 1023 STVIGLIERFYDPLQGIVKIDGRDIRSYHLRSLRQHMSLVSQEPTLFAGTIRENIMYGRA 1082

Query: 138  LR----------GKKLTDHEVHKLLKLADLDSTFHKKNGSELSVGQAQRVALARTLANEP 187
                        GK    HE   +  L+D   T+    G +LS GQ QR+A+ART+   P
Sbjct: 1083 SNKIDESEIIEAGKTANAHEF--ITSLSDGYDTYCGDRGVQLSGGQKQRIAIARTILKNP 1140


>AT4G01830.1 | Symbols: PGP5 | PGP5 (P-GLYCOPROTEIN 5); ATPase,
            coupled to transmembrane movement of substances |
            chr4:785683-790447 REVERSE
          Length = 1230

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 12/121 (9%)

Query: 78   STLLRSLNRLWEPPSGTVFXXXXXXXXXXXXXXXXXXXMLFQVPALFEGTVADNIRYGPQ 137
            ST++  L R ++P SG +                    ++ Q P LF  T+  NI YG  
Sbjct: 1027 STVISLLQRFYDPDSGHITLDGVELKKLRLKWLRQQMGLVGQEPVLFNDTIRANIAYGKG 1086

Query: 138  LRGKKLTDHEVHKLLKLAD---LDSTFHK-------KNGSELSVGQAQRVALARTLANEP 187
              G++ T+ E+    +LA+     S+  K       + G +LS GQ QRVA+AR +  EP
Sbjct: 1087 --GEEATEAEIIAASELANAHRFISSIQKGYDTVVGERGIQLSGGQKQRVAIARAIVKEP 1144

Query: 188  E 188
            +
Sbjct: 1145 K 1145


>AT1G02520.1 | Symbols: PGP11 | PGP11 (P-GLYCOPROTEIN 11); ATPase,
           coupled to transmembrane movement of substances |
           chr1:524134-528745 FORWARD
          Length = 1278

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 16/121 (13%)

Query: 78  STLLRSLNRLWEPPSGTVFXXXXXXXXXXXXXXXXXXXMLFQVPALFEGTVADNIRYGPQ 137
           ST++  + R ++P SG V                    ++ Q P LF  ++ +NI YG +
Sbjct: 423 STVISLIERFYDPKSGAVLIDGVNLKEFQLKWIRSKIGLVSQEPVLFSSSIMENIAYGKE 482

Query: 138 LRGKKLTDHEVHKLLKLAD-----------LDSTFHKKNGSELSVGQAQRVALARTLANE 186
                 T  E+    +LA+           LD T   ++G++LS GQ QR+A+AR +  +
Sbjct: 483 ----NATVEEIKAATELANAAKFIDKLPQGLD-TMVGEHGTQLSGGQKQRIAIARAILKD 537

Query: 187 P 187
           P
Sbjct: 538 P 538


>AT3G62150.1 | Symbols: PGP21 | PGP21 (P-GLYCOPROTEIN 21); ATPase,
           coupled to transmembrane movement of substances |
           chr3:23008755-23013579 REVERSE
          Length = 1292

 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 14/120 (11%)

Query: 78  STLLRSLNRLWEPPSGTVFXXXXXXXXXXXXXXXXXXXMLFQVPALFEGTVADNIRYGPQ 137
           ST++  + R ++P SG V                    ++ Q P LF  ++ +NI YG +
Sbjct: 445 STVVSLIERFYDPQSGEVRIDGINLKEFQLKWIRSKIGLVSQEPVLFTSSIKENIAYGKE 504

Query: 138 LRGKKLTDHEVHKLLKLADLDSTFHK----------KNGSELSVGQAQRVALARTLANEP 187
                 T  E+ K  +LA+      K          ++G++LS GQ QR+A+AR +  +P
Sbjct: 505 ----NATVEEIRKATELANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILKDP 560


>AT1G27940.1 | Symbols: PGP13 | PGP13 (P-GLYCOPROTEIN 13); ATPase,
            coupled to transmembrane movement of substances |
            chr1:9733597-9738129 REVERSE
          Length = 1245

 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 10/160 (6%)

Query: 36   IKFRIKNLIKKSDAGVTILNGINLDXXXXXXXXXXXXXXXXXSTLLRSLNRLWEPPSGTV 95
            I+FR  + +  +   + I   +NL                  ST++  + R ++P +G +
Sbjct: 1004 IEFRNVSFVYPTRPEIDIFKNLNLRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDPSNGNL 1063

Query: 96   FXXXXXXXXXXXXXXXXXXXMLFQVPALFEGTVADNIRYGPQ--------LRGKKLTDHE 147
                                ++ Q PALF  T+ +NI+YG +           K    HE
Sbjct: 1064 CIDGQDIKTLNLRSLRKKLALVQQEPALFSTTIYENIKYGNENASEAEIMEAAKAANAHE 1123

Query: 148  VHKLLKLADLDSTFHKKNGSELSVGQAQRVALARTLANEP 187
               ++K+ +   T     G +LS GQ QRVA+AR +  +P
Sbjct: 1124 F--IIKMEEGYKTHAGDKGVQLSGGQKQRVAIARAVLKDP 1161


>AT2G47000.1 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ABCB4 (ATP
           BINDING CASSETTE SUBFAMILY B4); ATPase, coupled to
           transmembrane movement of substances /
           xenobiotic-transporting ATPase | chr2:19310008-19314750
           REVERSE
          Length = 1286

 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 14/120 (11%)

Query: 78  STLLRSLNRLWEPPSGTVFXXXXXXXXXXXXXXXXXXXMLFQVPALFEGTVADNIRYGPQ 137
           ST++  + R ++P +G V                    ++ Q P LF  ++ DNI YG +
Sbjct: 426 STVVSLIERFYDPQAGDVLIDGINLKEFQLKWIRSKIGLVSQEPVLFTASIKDNIAYGKE 485

Query: 138 LRGKKLTDHEVHKLLKLADLDS----------TFHKKNGSELSVGQAQRVALARTLANEP 187
                 T  E+    +LA+             T   ++G++LS GQ QR+A+AR +  +P
Sbjct: 486 ----DATTEEIKAAAELANASKFVDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILKDP 541