Jatropha Genome Database

JcCA0270781.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0270781.10 - phase: 1 /partial
         (478 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20340.1 | Symbols:  | tyrosine decarboxylase, putative | chr...   595   e-170
AT4G28680.1 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase, p...   580   e-166
AT4G28680.2 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase, p...   576   e-165

>AT2G20340.1 | Symbols:  | tyrosine decarboxylase, putative |
           chr2:8779804-8782490 FORWARD
          Length = 490

 Score =  595 bits (1533), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 276/475 (58%), Positives = 357/475 (75%), Gaps = 12/475 (2%)

Query: 1   DFIADYYQNIEKHPVLSQVEPGYLRKRLPLSAPHNPETIETILQDVQKHILPGITHWQSP 60
           DFIADYY+ IE  PVLSQV+PGYL K LP SAP +PET++ +L DV+  ILPG+THWQSP
Sbjct: 26  DFIADYYKTIEDFPVLSQVQPGYLHKLLPDSAPDHPETLDQVLDDVRAKILPGVTHWQSP 85

Query: 61  NYFAYFAASGSTASFLGEMLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCFLF 120
           ++FAY+ ++ S A FLGEML  G  IVGF+W++SPAATELE IV+DW+ ++L LP  F+ 
Sbjct: 86  SFFAYYPSNSSVAGFLGEMLSAGLGIVGFSWVTSPAATELEMIVLDWVAKLLNLPEQFMS 145

Query: 121 SGSGGGVIQGTTCEAILCTLIAARDQMLRGIGKEKIGKLVVYASDQTHSALQKAAQIAGI 180
            G+GGGVIQG+  EA+L  LIAARD++LR +GK  + KLVVY+SDQTHSALQKA QIAGI
Sbjct: 146 KGNGGGVIQGSASEAVLVVLIAARDKVLRSVGKNALEKLVVYSSDQTHSALQKACQIAGI 205

Query: 181 NPENFRAIKTTKSTLFALSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLRPLCD 240
           +PEN R + T  ST +AL P+SL+  +  D+E GLIP FLCA +GTTS+TAVDPL  L  
Sbjct: 206 HPENCRVLTTDSSTNYALRPESLQEAVSRDLEAGLIPFFLCANVGTTSSTAVDPLAALGK 265

Query: 241 VAREYNIWVHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWLLTNLDCCCLWVKDP 300
           +A    IW HVDAAYAG+ACICPE++ ++DG+E A+SF++NAHKW LTN DC  LWVKD 
Sbjct: 266 IANSNGIWFHVDAAYAGSACICPEYRQYIDGVETADSFNMNAHKWFLTNFDCSLLWVKDQ 325

Query: 301 NALIKSLSTNPEYLKNKASDSAQVIDYKDWQIALSRRFRSLKLWLVLRSYGVGNLRTFLR 360
           ++L  +LSTNPE+LKNKAS +  V+DYKDWQI L RRFRSLKLW+VLR YG   L++++R
Sbjct: 326 DSLTLALSTNPEFLKNKASQANLVVDYKDWQIPLGRRFRSLKLWMVLRLYGSETLKSYIR 385

Query: 361 QHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRIVPGAIEMGKGGVQILPDREILANELN 420
            H+++AK FE LV +D  FEIV PR FA+VCFR+VP            + D E   N  N
Sbjct: 386 NHIKLAKEFEQLVSQDPNFEIVTPRIFALVCFRLVP------------VKDEEKKCNNRN 433

Query: 421 RRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKVVREHANAIL 475
           R LL+++N+SG +FM+H  + G   +R A+GA LTE+ HV  AWK+++E A+ +L
Sbjct: 434 RELLDAVNSSGKLFMSHTALSGKIVLRCAIGAPLTEEKHVKEAWKIIQEEASYLL 488


>AT4G28680.1 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase,
           putative | chr4:14155248-14158546 FORWARD
          Length = 545

 Score =  580 bits (1494), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 270/481 (56%), Positives = 354/481 (73%), Gaps = 16/481 (3%)

Query: 1   DFIADYYQNIEKHP----VLSQVEPGYLRKRLPLSAPHNPETIETILQDVQKHILPGITH 56
           DFIADYY+N++  P    VLSQV+PGYLR  LP SAP  PE+++ +L DV K I+PGITH
Sbjct: 74  DFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITH 133

Query: 57  WQSPNYFAYFAASGSTASFLGEMLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPS 116
           WQSP+YFAY+A+S S A FLGEML  G ++VGF WL+SPAATELE IV+DWL ++LQLP 
Sbjct: 134 WQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPD 193

Query: 117 CFLFSGSGGGVIQGTTCEAILCTLIAARDQMLRGIGKEKIGKLVVYASDQTHSALQKAAQ 176
            FL +G+GGGVIQGT CEA+L  ++AARD++L+ +GK  + +LVVY SDQTHS+ +KA  
Sbjct: 194 HFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL 253

Query: 177 IAGINPENFRAIKTTKSTLFALSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLR 236
           I GI+ EN R +KT  ST + + P+SL   I  D+ KG IP F+CAT+GTTS+ AVDPL 
Sbjct: 254 IGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLV 313

Query: 237 PLCDVAREYNIWVHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWLLTNLDCCCLW 296
           PL ++A++Y IW+HVDAAYAGNACICPE++ F+DG+E+A+SF++NAHKWL  N  C  LW
Sbjct: 314 PLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLW 373

Query: 297 VKDPNALIKSLSTNPEYLKNKASDSAQVIDYKDWQIALSRRFRSLKLWLVLRSYGVGNLR 356
           VKD  +LI +L TNPEYL+ K S    V++YKDWQI+LSRRFRSLKLW+VLR YG  NLR
Sbjct: 374 VKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLR 433

Query: 357 TFLRQHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRIVPGAIEMGKGGVQILPDREILA 416
            F+R HV +AK FE  V +D  FE+V  R F++VCFR+ P            +   E   
Sbjct: 434 NFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAP------------VDGDEDQC 481

Query: 417 NELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKVVREHANAILR 476
           NE NR LL ++N++G IF++H  + G + +RFAVGA LTE+ HV  AW+++++HA+   R
Sbjct: 482 NERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTR 541

Query: 477 T 477
            
Sbjct: 542 N 542


>AT4G28680.2 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase,
           putative | chr4:14155248-14158546 FORWARD
          Length = 547

 Score =  576 bits (1485), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 271/483 (56%), Positives = 354/483 (73%), Gaps = 18/483 (3%)

Query: 1   DFIADYYQNIEKHP----VLSQVEPGYLRKRLPLSAPHNPETIETILQDVQKHILPGITH 56
           DFIADYY+N++  P    VLSQV+PGYLR  LP SAP  PE+++ +L DV K I+PGITH
Sbjct: 74  DFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITH 133

Query: 57  WQSPNYFAYFAASGSTASFLGEMLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPS 116
           WQSP+YFAY+A+S S A FLGEML  G ++VGF WL+SPAATELE IV+DWL ++LQLP 
Sbjct: 134 WQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPD 193

Query: 117 CFLFSGSGGGVIQGTTCEAILCTLIAARDQMLRGIGKEKIGKLVVYASDQTHSALQKAAQ 176
            FL +G+GGGVIQGT CEA+L  ++AARD++L+ +GK  + +LVVY SDQTHS+ +KA  
Sbjct: 194 HFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL 253

Query: 177 IAGINPENFRAIKTTKSTLFALSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLR 236
           I GI+ EN R +KT  ST + + P+SL   I  D+ KG IP F+CAT+GTTS+ AVDPL 
Sbjct: 254 IGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLV 313

Query: 237 PLCDVAREYNIWVHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWLLTNLDCCCLW 296
           PL ++A++Y IW+HVDAAYAGNACICPE++ F+DG+E+A+SF++NAHKWL  N  C  LW
Sbjct: 314 PLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLW 373

Query: 297 VKDPNALIKSLSTNPEYL--KNKASDSAQVIDYKDWQIALSRRFRSLKLWLVLRSYGVGN 354
           VKD  +LI +L TNPEYL  K K S    V++YKDWQI+LSRRFRSLKLW+VLR YG  N
Sbjct: 374 VKDRYSLIDALKTNPEYLEFKVKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSEN 433

Query: 355 LRTFLRQHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRIVPGAIEMGKGGVQILPDREI 414
           LR F+R HV +AK FE  V +D  FE+V  R F++VCFR+ P            +   E 
Sbjct: 434 LRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAP------------VDGDED 481

Query: 415 LANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKVVREHANAI 474
             NE NR LL ++N++G IF++H  + G + +RFAVGA LTE+ HV  AW+++++HA+  
Sbjct: 482 QCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 541

Query: 475 LRT 477
            R 
Sbjct: 542 TRN 544