Jatropha Genome Database

JcCA0269951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0269951.10 + phase: 0 /partial
         (50 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17340.1 | Symbols:  | pantothenate kinase-related | chr2:754...    63   4e-11
AT2G17320.1 | Symbols:  | pantothenate kinase-related | chr2:753...    62   5e-11
AT4G35360.1 | Symbols:  | pantothenate kinase family protein | c...    59   8e-10
AT4G32180.3 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2)...    57   3e-09
AT4G32180.2 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2)...    57   3e-09
AT4G32180.1 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2)...    57   3e-09

>AT2G17340.1 | Symbols:  | pantothenate kinase-related |
           chr2:7541615-7544089 REVERSE
          Length = 367

 Score = 62.8 bits (151), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/30 (96%), Positives = 29/30 (96%)

Query: 1   AVIFVDNSGADIILGILPFARELLRRGTQV 30
           AVIFVDNSGADIILGILPFARELLRRG QV
Sbjct: 215 AVIFVDNSGADIILGILPFARELLRRGAQV 244


>AT2G17320.1 | Symbols:  | pantothenate kinase-related |
           chr2:7533537-7535876 REVERSE
          Length = 361

 Score = 62.4 bits (150), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/30 (96%), Positives = 29/30 (96%)

Query: 1   AVIFVDNSGADIILGILPFARELLRRGTQV 30
           AVIFVDNSGADIILGILPFARELLRRG QV
Sbjct: 209 AVIFVDNSGADIILGILPFARELLRRGIQV 238


>AT4G35360.1 | Symbols:  | pantothenate kinase family protein |
           chr4:16812303-16814656 REVERSE
          Length = 367

 Score = 58.5 bits (140), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/30 (90%), Positives = 28/30 (93%)

Query: 1   AVIFVDNSGADIILGILPFARELLRRGTQV 30
           AVIFVDNSGADIILGILPFARE+LR G QV
Sbjct: 215 AVIFVDNSGADIILGILPFAREMLRLGMQV 244


>AT4G32180.3 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2);
           pantothenate kinase | chr4:15538340-15543715 REVERSE
          Length = 783

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/34 (67%), Positives = 30/34 (88%)

Query: 1   AVIFVDNSGADIILGILPFARELLRRGTQVCFIS 34
           A++FVDNSGAD+ILG+LP ARE LRRGT+V  ++
Sbjct: 726 ALLFVDNSGADVILGMLPLAREFLRRGTEVVLVA 759


>AT4G32180.2 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2);
           pantothenate kinase | chr4:15538340-15543715 REVERSE
          Length = 783

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/34 (67%), Positives = 30/34 (88%)

Query: 1   AVIFVDNSGADIILGILPFARELLRRGTQVCFIS 34
           A++FVDNSGAD+ILG+LP ARE LRRGT+V  ++
Sbjct: 726 ALLFVDNSGADVILGMLPLAREFLRRGTEVVLVA 759


>AT4G32180.1 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2);
           pantothenate kinase | chr4:15537724-15543715 REVERSE
          Length = 901

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/34 (67%), Positives = 30/34 (88%)

Query: 1   AVIFVDNSGADIILGILPFARELLRRGTQVCFIS 34
           A++FVDNSGAD+ILG+LP ARE LRRGT+V  ++
Sbjct: 726 ALLFVDNSGADVILGMLPLAREFLRRGTEVVLVA 759