Jatropha Genome Database

JcCA0269021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0269021.10 + phase: 0 /pseudo
         (226 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01350.1 | Symbols: QPT | QPT (QUINOLINATE PHOSHORIBOSYLTRANS...   218   2e-57
AT2G01350.4 | Symbols: QPT | QPT (QUINOLINATE PHOSHORIBOSYLTRANS...   214   3e-56
AT2G01350.3 | Symbols: QPT | QPT (QUINOLINATE PHOSHORIBOSYLTRANS...   202   1e-52
AT2G01350.2 | Symbols: QPT | QPT (QUINOLINATE PHOSHORIBOSYLTRANS...   154   6e-38

>AT2G01350.1 | Symbols: QPT | QPT (QUINOLINATE
           PHOSHORIBOSYLTRANSFERASE); nicotinate-nucleotide
           diphosphorylase (carboxylating) | chr2:165332-167209
           REVERSE
          Length = 348

 Score =  218 bits (556), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 105/141 (74%), Positives = 119/141 (84%), Gaps = 2/141 (1%)

Query: 34  RRIVRMSATATRNPNTMFESVTIQPPLHPTYDLKGVIKLALAEDAGDQGDVTCMATIPLD 93
           R  V+MSA+AT+    +  S+ I+PP HPTYDLK VIKLALAEDAG  GDVTCMATIP D
Sbjct: 17  RSFVKMSASATQTAGEV--SMGIKPPSHPTYDLKAVIKLALAEDAGHTGDVTCMATIPFD 74

Query: 94  MEVEAHFLAKEDGIIAGIALTEMIFHEVDPSLKVEWSQKDGDCVHRGLQFGRVSGQAHNI 153
           MEVEA+FLAKEDGI+AG+AL +MIF  VDPSLKVEW +KDGD VH+GL+FG+VSG AH I
Sbjct: 75  MEVEAYFLAKEDGIVAGVALADMIFEHVDPSLKVEWMRKDGDYVHKGLKFGKVSGNAHKI 134

Query: 154 VVAERVALNFMQRMSGIATLT 174
           VVAERV LNFMQRMSGIATLT
Sbjct: 135 VVAERVLLNFMQRMSGIATLT 155


>AT2G01350.4 | Symbols: QPT | QPT (QUINOLINATE
           PHOSHORIBOSYLTRANSFERASE); nicotinate-nucleotide
           diphosphorylase (carboxylating) | chr2:165332-167058
           REVERSE
          Length = 327

 Score =  214 bits (545), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 103/136 (75%), Positives = 116/136 (85%), Gaps = 2/136 (1%)

Query: 39  MSATATRNPNTMFESVTIQPPLHPTYDLKGVIKLALAEDAGDQGDVTCMATIPLDMEVEA 98
           MSA+AT+    +  S+ I+PP HPTYDLK VIKLALAEDAG  GDVTCMATIP DMEVEA
Sbjct: 1   MSASATQTAGEV--SMGIKPPSHPTYDLKAVIKLALAEDAGHTGDVTCMATIPFDMEVEA 58

Query: 99  HFLAKEDGIIAGIALTEMIFHEVDPSLKVEWSQKDGDCVHRGLQFGRVSGQAHNIVVAER 158
           +FLAKEDGI+AG+AL +MIF  VDPSLKVEW +KDGD VH+GL+FG+VSG AH IVVAER
Sbjct: 59  YFLAKEDGIVAGVALADMIFEHVDPSLKVEWMRKDGDYVHKGLKFGKVSGNAHKIVVAER 118

Query: 159 VALNFMQRMSGIATLT 174
           V LNFMQRMSGIATLT
Sbjct: 119 VLLNFMQRMSGIATLT 134


>AT2G01350.3 | Symbols: QPT | QPT (QUINOLINATE
           PHOSHORIBOSYLTRANSFERASE); nicotinate-nucleotide
           diphosphorylase (carboxylating) | chr2:165332-167209
           REVERSE
          Length = 342

 Score =  202 bits (514), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 101/141 (71%), Positives = 114/141 (80%), Gaps = 8/141 (5%)

Query: 34  RRIVRMSATATRNPNTMFESVTIQPPLHPTYDLKGVIKLALAEDAGDQGDVTCMATIPLD 93
           R  V+MSA+AT+    +  S+ I+PP HPTYDLK VIKLALAEDAG  GDVTCMATIP D
Sbjct: 17  RSFVKMSASATQTAGEV--SMGIKPPSHPTYDLKAVIKLALAEDAGHTGDVTCMATIPFD 74

Query: 94  MEVEAHFLAKEDGIIAGIALTEMIFHEVDPSLKVEWSQKDGDCVHRGLQFGRVSGQAHNI 153
           MEVEA+FLAKEDGI+AG+AL +MIF  VDPSL      KDGD VH+GL+FG+VSG AH I
Sbjct: 75  MEVEAYFLAKEDGIVAGVALADMIFEHVDPSL------KDGDYVHKGLKFGKVSGNAHKI 128

Query: 154 VVAERVALNFMQRMSGIATLT 174
           VVAERV LNFMQRMSGIATLT
Sbjct: 129 VVAERVLLNFMQRMSGIATLT 149


>AT2G01350.2 | Symbols: QPT | QPT (QUINOLINATE
           PHOSHORIBOSYLTRANSFERASE); nicotinate-nucleotide
           diphosphorylase (carboxylating) | chr2:165332-166842
           REVERSE
          Length = 281

 Score =  154 bits (388), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 71/88 (80%), Positives = 79/88 (89%)

Query: 87  MATIPLDMEVEAHFLAKEDGIIAGIALTEMIFHEVDPSLKVEWSQKDGDCVHRGLQFGRV 146
           MATIP DMEVEA+FLAKEDGI+AG+AL +MIF  VDPSLKVEW +KDGD VH+GL+FG+V
Sbjct: 1   MATIPFDMEVEAYFLAKEDGIVAGVALADMIFEHVDPSLKVEWMRKDGDYVHKGLKFGKV 60

Query: 147 SGQAHNIVVAERVALNFMQRMSGIATLT 174
           SG AH IVVAERV LNFMQRMSGIATLT
Sbjct: 61  SGNAHKIVVAERVLLNFMQRMSGIATLT 88