Jatropha Genome Database
- JcCA0268581.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0268581.10 + phase: 0
(298 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27600.2 | Symbols: | glycosyl transferase family 43 protein... 201 5e-52
AT1G27600.1 | Symbols: | glycosyl transferase family 43 protein... 201 5e-52
AT2G37090.1 | Symbols: IRX9 | IRX9 (IRREGULAR XYLEM 9); transfer... 132 3e-31
AT4G36890.1 | Symbols: IRX14 | IRX14 (irregular xylem 14); trans... 82 3e-16
AT5G67230.1 | Symbols: | glycosyl transferase family 43 protein... 77 1e-14
>AT1G27600.2 | Symbols: | glycosyl transferase family 43 protein |
chr1:9604083-9605881 REVERSE
Length = 394
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 164/298 (55%), Gaps = 45/298 (15%)
Query: 1 MASIRRTLSPVPRPGTLLNGEVCQVXXXXXXXXXXAQNFSTXXXXXXXXXXXXXXQAFVL 60
MASIRRTLSP+ + NG + N S +L
Sbjct: 1 MASIRRTLSPMYHDRSHENGGSHK--GFTIGGSSSKHNSSQFLSYLTK----------LL 48
Query: 61 GVFS-PRSSRPLERSKPKGQVWRRALFHFLVCFVVGIFIGLTPFVSMNVKSKSQAFSFEM 119
GV S P+SSR +G WRR + FLV F++G +GLTPF M + S FSFE+
Sbjct: 49 GVTSDPKSSR-------RGP-WRRPFYQFLVFFLLGFVLGLTPFGKMEDVNGSDRFSFEI 100
Query: 120 VSTVRNFHTFESMTTNMTQMVKHEAVENDSAIEPKVKGLKLDDVISNDMPINQSNPEDLD 179
Q E +EN E V + + ++ ++++
Sbjct: 101 -----------------KQPYVEERLENRKREEAAVDAVSF-------VAETENGKKEVN 136
Query: 180 MEVGKLLIVVTSTHARPFQAYYLNRLAFTLKLVKSPLLWIVVEMTSQSEQTADILRRTGV 239
KLLIVVT T+ R QAYYLNR+A TL+LV+SP+LWIVVE S +T++ILR+TGV
Sbjct: 137 FVPKKLLIVVTPTYNRAMQAYYLNRVAQTLRLVESPVLWIVVEGNVASFETSEILRKTGV 196
Query: 240 MYRHLVCNKNLTDIKDRSVHQRNVALSHIETHRLDGIVYFADDSNIYSAELFEQMRKI 297
MYRHLVC +N+T IKDR VHQRN AL HIE H+LDGIVYFADD NIYS ELF+ +R+I
Sbjct: 197 MYRHLVCKRNMTSIKDRGVHQRNTALEHIELHKLDGIVYFADDDNIYSLELFQSLRQI 254
>AT1G27600.1 | Symbols: | glycosyl transferase family 43 protein |
chr1:9604083-9605881 REVERSE
Length = 394
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 164/298 (55%), Gaps = 45/298 (15%)
Query: 1 MASIRRTLSPVPRPGTLLNGEVCQVXXXXXXXXXXAQNFSTXXXXXXXXXXXXXXQAFVL 60
MASIRRTLSP+ + NG + N S +L
Sbjct: 1 MASIRRTLSPMYHDRSHENGGSHK--GFTIGGSSSKHNSSQFLSYLTK----------LL 48
Query: 61 GVFS-PRSSRPLERSKPKGQVWRRALFHFLVCFVVGIFIGLTPFVSMNVKSKSQAFSFEM 119
GV S P+SSR +G WRR + FLV F++G +GLTPF M + S FSFE+
Sbjct: 49 GVTSDPKSSR-------RGP-WRRPFYQFLVFFLLGFVLGLTPFGKMEDVNGSDRFSFEI 100
Query: 120 VSTVRNFHTFESMTTNMTQMVKHEAVENDSAIEPKVKGLKLDDVISNDMPINQSNPEDLD 179
Q E +EN E V + + ++ ++++
Sbjct: 101 -----------------KQPYVEERLENRKREEAAVDAVSF-------VAETENGKKEVN 136
Query: 180 MEVGKLLIVVTSTHARPFQAYYLNRLAFTLKLVKSPLLWIVVEMTSQSEQTADILRRTGV 239
KLLIVVT T+ R QAYYLNR+A TL+LV+SP+LWIVVE S +T++ILR+TGV
Sbjct: 137 FVPKKLLIVVTPTYNRAMQAYYLNRVAQTLRLVESPVLWIVVEGNVASFETSEILRKTGV 196
Query: 240 MYRHLVCNKNLTDIKDRSVHQRNVALSHIETHRLDGIVYFADDSNIYSAELFEQMRKI 297
MYRHLVC +N+T IKDR VHQRN AL HIE H+LDGIVYFADD NIYS ELF+ +R+I
Sbjct: 197 MYRHLVCKRNMTSIKDRGVHQRNTALEHIELHKLDGIVYFADDDNIYSLELFQSLRQI 254
>AT2G37090.1 | Symbols: IRX9 | IRX9 (IRREGULAR XYLEM 9);
transferase, transferring glycosyl groups /
xylosyltransferase | chr2:15587671-15589223 REVERSE
Length = 351
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 5/230 (2%)
Query: 71 LERSKPKGQVWRRALFHFLVCFVVGIFIGLTPFVSMNVKSKSQAFSFEMVSTVRNFHTFE 130
LERSK K QVW++A+ HF +CFV+G F G P + S + S+ + FE
Sbjct: 4 LERSKKKAQVWKKAVIHFSLCFVMGFFTGFAPAGKASFFSNFETTSYTSTKSPIPPQPFE 63
Query: 131 SMTTNMTQMVKHEAVENDSAIEPKVKGLKLDDVISNDMPINQSNPEDLDMEVGKLLIVVT 190
+ T ++ + + S + + + + N + + L+IVVT
Sbjct: 64 NATYTQHSLLNRTLINSQSQAPAPAESREAEGETRSLSEKEDEN--QVKVTPRGLVIVVT 121
Query: 191 STHARP-FQAYYLNRLAFTLKLVKSPLLWIVVEMTSQSEQ--TADILRRTGVMYRHLVCN 247
+ ++ L R+A TL+LV PLLWIVVE S E+ ++ +LR+TG+MYR +V
Sbjct: 122 PIITKDRYKNVLLRRMANTLRLVPPPLLWIVVEKHSDGEEKSSSTMLRKTGIMYRRIVFK 181
Query: 248 KNLTDIKDRSVHQRNVALSHIETHRLDGIVYFADDSNIYSAELFEQMRKI 297
++ T ++ HQRN+AL HIE H+L GIV+FA +NIY + F ++R I
Sbjct: 182 EDFTSLESELDHQRNLALRHIEHHKLSGIVHFAGLNNIYDLDFFVKIRDI 231
>AT4G36890.1 | Symbols: IRX14 | IRX14 (irregular xylem 14);
transferase, transferring glycosyl groups /
xylosyltransferase | chr4:17379631-17381627 REVERSE
Length = 525
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Query: 180 MEVGKLLIVVTSTHARPFQAYYLNRLAFTLKLVKSPLLWIVVEMTSQSEQTADILRRTGV 239
M+ K++I VT T+ R FQA +L + +L LV L+WIVVE + +T I+ ++G+
Sbjct: 156 MKSSKMVIAVTPTYVRTFQALHLTGVMHSLMLVPYDLVWIVVEAGGATNETGLIIAKSGL 215
Query: 240 MYRHLVCNKNLTDI-KDRS---VHQRNVALSHIETHRLDGIVYFADDSNIYSAELFEQMR 295
H+ ++ + + +DRS V R AL + +LDGIV FADDSN++S ELF++++
Sbjct: 216 RTIHVGIDQRMPNTWEDRSKLEVFMRLQALRVVREEKLDGIVMFADDSNMHSMELFDEIQ 275
Query: 296 KIR 298
++
Sbjct: 276 NVK 278
>AT5G67230.1 | Symbols: | glycosyl transferase family 43 protein |
chr5:26822506-26824181 FORWARD
Length = 492
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Query: 184 KLLIVVTSTHARPFQAYYLNRLAFTLKLVKSPLLWIVVEMTSQSEQTADILRRTGVMYRH 243
+ +IVVT T+ R FQA +L + +L LV L+WIVVE + +TA + ++G+ H
Sbjct: 152 RTVIVVTPTYVRTFQALHLTGVMHSLMLVPYDLVWIVVEAGGITNETASFIAKSGLKTIH 211
Query: 244 LVCNKNLTDI-KDR---SVHQRNVALSHIETHRLDGIVYFADDSNIYSAELFEQMRKIR 298
L ++ + + +DR R AL + +LDGIV FADDSN++S ELF++++ ++
Sbjct: 212 LGFDQKMPNTWEDRHKLETKMRLHALRVVREKKLDGIVMFADDSNMHSMELFDEIQTVK 270