Jatropha Genome Database

JcCA0265621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0265621.10 - phase: 0 /partial
         (162 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41540.3 | Symbols: GPDHC1 | GPDHC1; NAD or NADH binding / gl...   288   9e-79
AT2G41540.2 | Symbols: GPDHC1 | GPDHC1; NAD or NADH binding / gl...   288   9e-79
AT2G41540.1 | Symbols: GPDHC1 | GPDHC1; NAD or NADH binding / gl...   288   9e-79
AT3G07690.1 | Symbols:  | NAD or NADH binding / binding / cataly...   271   1e-73

>AT2G41540.3 | Symbols: GPDHC1 | GPDHC1; NAD or NADH binding /
           glycerol-3-phosphate dehydrogenase (NAD+) |
           chr2:17326801-17328654 FORWARD
          Length = 462

 Score =  288 bits (737), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 147/162 (90%), Positives = 155/162 (95%)

Query: 1   ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEL 60
           ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGE+
Sbjct: 301 ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEI 360

Query: 61  NRDMGDSISGKGMIQGVSAVKAFYELLSQPSLNVLHPDEKKPVAPVELCPILKTLYKILI 120
           NRDMGDSISGKGMIQGVSAV AFY+LLSQ SL++L  +EKKPVAPVE CPILKTLYKILI
Sbjct: 361 NRDMGDSISGKGMIQGVSAVGAFYQLLSQSSLSILPSEEKKPVAPVESCPILKTLYKILI 420

Query: 121 SREHSSQAILQALRDENLNDPRERIEIAQSHAFYRPSLLGQP 162
           +RE S+QAILQALRDE LNDPR+RIEIAQSHAFYRPSLLGQP
Sbjct: 421 TREQSTQAILQALRDETLNDPRDRIEIAQSHAFYRPSLLGQP 462


>AT2G41540.2 | Symbols: GPDHC1 | GPDHC1; NAD or NADH binding /
           glycerol-3-phosphate dehydrogenase (NAD+) |
           chr2:17326801-17328654 FORWARD
          Length = 462

 Score =  288 bits (737), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 147/162 (90%), Positives = 155/162 (95%)

Query: 1   ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEL 60
           ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGE+
Sbjct: 301 ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEI 360

Query: 61  NRDMGDSISGKGMIQGVSAVKAFYELLSQPSLNVLHPDEKKPVAPVELCPILKTLYKILI 120
           NRDMGDSISGKGMIQGVSAV AFY+LLSQ SL++L  +EKKPVAPVE CPILKTLYKILI
Sbjct: 361 NRDMGDSISGKGMIQGVSAVGAFYQLLSQSSLSILPSEEKKPVAPVESCPILKTLYKILI 420

Query: 121 SREHSSQAILQALRDENLNDPRERIEIAQSHAFYRPSLLGQP 162
           +RE S+QAILQALRDE LNDPR+RIEIAQSHAFYRPSLLGQP
Sbjct: 421 TREQSTQAILQALRDETLNDPRDRIEIAQSHAFYRPSLLGQP 462


>AT2G41540.1 | Symbols: GPDHC1 | GPDHC1; NAD or NADH binding /
           glycerol-3-phosphate dehydrogenase (NAD+) |
           chr2:17326801-17328654 FORWARD
          Length = 462

 Score =  288 bits (737), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 147/162 (90%), Positives = 155/162 (95%)

Query: 1   ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEL 60
           ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGE+
Sbjct: 301 ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEI 360

Query: 61  NRDMGDSISGKGMIQGVSAVKAFYELLSQPSLNVLHPDEKKPVAPVELCPILKTLYKILI 120
           NRDMGDSISGKGMIQGVSAV AFY+LLSQ SL++L  +EKKPVAPVE CPILKTLYKILI
Sbjct: 361 NRDMGDSISGKGMIQGVSAVGAFYQLLSQSSLSILPSEEKKPVAPVESCPILKTLYKILI 420

Query: 121 SREHSSQAILQALRDENLNDPRERIEIAQSHAFYRPSLLGQP 162
           +RE S+QAILQALRDE LNDPR+RIEIAQSHAFYRPSLLGQP
Sbjct: 421 TREQSTQAILQALRDETLNDPRDRIEIAQSHAFYRPSLLGQP 462


>AT3G07690.1 | Symbols:  | NAD or NADH binding / binding /
           catalytic/ coenzyme binding / glycerol-3-phosphate
           dehydrogenase (NAD+)/ oxidoreductase/ oxidoreductase,
           acting on CH-OH group of donors / oxidoreductase, acting
           on the CH-OH group of donors, NAD or NADP as acceptor |
           chr3:2457232-2459378 FORWARD
          Length = 466

 Score =  271 bits (694), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 130/161 (80%), Positives = 145/161 (90%)

Query: 1   ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEL 60
           ESATSKSVYFAHCTSEMIFITHLLA+EPEKLAGPLLADTYVTLLKGRNAWYGQ LAKGEL
Sbjct: 304 ESATSKSVYFAHCTSEMIFITHLLAKEPEKLAGPLLADTYVTLLKGRNAWYGQKLAKGEL 363

Query: 61  NRDMGDSISGKGMIQGVSAVKAFYELLSQPSLNVLHPDEKKPVAPVELCPILKTLYKILI 120
           + +MGDSI GKGMIQGVSAVKAF+ELL+Q SL++ HP+E KPV P ELCPILK LY+ILI
Sbjct: 364 SLEMGDSIKGKGMIQGVSAVKAFFELLNQSSLSLQHPEEGKPVTPAELCPILKMLYRILI 423

Query: 121 SREHSSQAILQALRDENLNDPRERIEIAQSHAFYRPSLLGQ 161
           +RE S +AIL+ALRDE +NDPRE IEIA SH F++P LLGQ
Sbjct: 424 TREFSCEAILEALRDETMNDPRELIEIAHSHLFFQPWLLGQ 464