Jatropha Genome Database

JcCA0265541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0265541.10 + phase: 1 /pseudo/partial
         (159 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29840.1 | Symbols: MTO2, TS | MTO2 (METHIONINE OVER-ACCUMULA...   241   1e-64
AT1G72810.1 | Symbols:  | threonine synthase, putative | chr1:27...   225   8e-60

>AT4G29840.1 | Symbols: MTO2, TS | MTO2 (METHIONINE OVER-ACCUMULATOR
           2); threonine synthase | chr4:14599434-14601014 REVERSE
          Length = 526

 Score =  241 bits (616), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 116/129 (89%), Positives = 121/129 (93%)

Query: 27  FASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL 86
           FASAIQIGDPVSIDRAVYALK  NGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL
Sbjct: 393 FASAIQIGDPVSIDRAVYALKKCNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL 452

Query: 87  NKLRNSGVIGPMDRTVVVSTAHGLKFTQSKIDYHSKAIPDMACRFANPPVQVKAEFGAVM 146
            KLRN GVI P DRTVVVSTAHGLKFTQSKIDYHS AIPDMACRF+NPPV VKA+FGAVM
Sbjct: 453 FKLRNQGVIAPTDRTVVVSTAHGLKFTQSKIDYHSNAIPDMACRFSNPPVDVKADFGAVM 512

Query: 147 DVLKNFLGN 155
           DVLK++LG+
Sbjct: 513 DVLKSYLGS 521


>AT1G72810.1 | Symbols:  | threonine synthase, putative |
           chr1:27398760-27400393 REVERSE
          Length = 516

 Score =  225 bits (574), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 111/127 (87%), Positives = 116/127 (91%)

Query: 27  FASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL 86
           FASAIQIGDPVSIDRAVYALK SNGIVEEATEEELMDA A ADSTGMFICPHTGVALTAL
Sbjct: 385 FASAIQIGDPVSIDRAVYALKKSNGIVEEATEEELMDATALADSTGMFICPHTGVALTAL 444

Query: 87  NKLRNSGVIGPMDRTVVVSTAHGLKFTQSKIDYHSKAIPDMACRFANPPVQVKAEFGAVM 146
            KLR SGVIG  DRTVVVSTAHGLKFTQSKIDYHSK I +MACR ANPPV+VKA+FG+VM
Sbjct: 445 MKLRKSGVIGANDRTVVVSTAHGLKFTQSKIDYHSKNIKEMACRLANPPVKVKAKFGSVM 504

Query: 147 DVLKNFL 153
           DVLK +L
Sbjct: 505 DVLKEYL 511