Jatropha Genome Database

JcCA0265151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0265151.10 + phase: 0 
         (307 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17120.1 | Symbols: LYM2 | LYM2 (LYSM DOMAIN GPI-ANCHORED PRO...   208   3e-54
AT1G21880.1 | Symbols: LYM1 | LYM1 (LYSM DOMAIN GPI-ANCHORED PRO...    95   4e-20
AT1G21880.2 | Symbols: LYM1 | LYM1 (LYSM DOMAIN GPI-ANCHORED PRO...    95   7e-20
AT1G77630.1 | Symbols:  | peptidoglycan-binding LysM domain-cont...    81   8e-16
AT2G23770.1 | Symbols:  | protein kinase family protein / peptid...    56   2e-08

>AT2G17120.1 | Symbols: LYM2 | LYM2 (LYSM DOMAIN GPI-ANCHORED
           PROTEIN 2 PRECURSOR) | chr2:7459156-7460648 FORWARD
          Length = 350

 Score =  208 bits (530), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 102/192 (53%), Positives = 136/192 (70%), Gaps = 1/192 (0%)

Query: 77  FKCT-TSGQCNALIDYVAPNSTTISDIRTLFSIKNLRSILGANNLPLSTSPNQTIAAAQT 135
           F C+ ++  C +L+ Y + N+TT+ +I+TLF++KNLRSILGANNLPL+TS +Q +   Q 
Sbjct: 29  FNCSGSTSTCQSLVGYSSKNATTLRNIQTLFAVKNLRSILGANNLPLNTSRDQRVNPNQV 88

Query: 136 IKIPFPCKCSNGTGISNKKPIYTVQPGDGLDHIARDVFSALVTYEQIAAVNNIPDVNKIL 195
           +++P  C CSNGTG+SN+   YT++  D L  +A ++F  LVTYE+I+ VN IPD NKI 
Sbjct: 89  VRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVATEIFGGLVTYEKISEVNKIPDPNKIE 148

Query: 196 VGQELQIPLPCSCDDVGGEKVVHYGHVVESGSSLDLIAQEYGTTMTTLMTLNSITNASSL 255
           +GQ+  IPLPCSCD + GE VVHY HVV+ GSSL  IA ++GT  TTL  LN I   S L
Sbjct: 149 IGQKFWIPLPCSCDKLNGEDVVHYAHVVKLGSSLGEIAAQFGTDNTTLAQLNGIIGDSQL 208

Query: 256 KAGQVLDVPLKG 267
            A + LDVPLK 
Sbjct: 209 LADKPLDVPLKA 220


>AT1G21880.1 | Symbols: LYM1 | LYM1 (LYSM DOMAIN GPI-ANCHORED
           PROTEIN 1 PRECURSOR) | chr1:7680689-7682048 FORWARD
          Length = 316

 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 13/196 (6%)

Query: 79  CTTSGQCNALIDYVAPNSTTISDIRTLFSIKNLRSILGANNLPLS--TSPNQTIAAAQTI 136
           C+++  CNAL+ Y       +S++ +LF +  + SIL AN + +S     N  + +   +
Sbjct: 34  CSSNDTCNALLGYTLYTDLKVSEVASLFQVDPI-SILLANAIDISYPDVENHILPSKLFL 92

Query: 137 KIPFPCKCSNGTGISNKKPI---YTVQPGDGLDHIARDVFSALVTYEQIAAVNNIPDVNK 193
           KIP  C C +G     +K +   Y  +P D L  IA  V+  LV+ EQI   N++ D + 
Sbjct: 93  KIPITCSCVDGI----RKSVSTHYKTRPSDNLGSIADSVYGGLVSAEQIQEANSVNDPSL 148

Query: 194 ILVGQELQIPLPCSCDDVGGEKV--VHYGHVVESGSSLDLIAQEYGTTMTTLMTLNSITN 251
           + VG  L IPLPC+C +     +  V+  +VV+   +L  IA+ Y TT+T LM +N++  
Sbjct: 149 LDVGTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLVGIARRYSTTITDLMNVNAM-G 207

Query: 252 ASSLKAGQVLDVPLKG 267
           A  + +G +L VPL  
Sbjct: 208 APDVSSGDILAVPLSA 223


>AT1G21880.2 | Symbols: LYM1 | LYM1 (LYSM DOMAIN GPI-ANCHORED
           PROTEIN 1 PRECURSOR) | chr1:7680689-7682526 FORWARD
          Length = 416

 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 13/196 (6%)

Query: 79  CTTSGQCNALIDYVAPNSTTISDIRTLFSIKNLRSILGANNLPLSTS--PNQTIAAAQTI 136
           C+++  CNAL+ Y       +S++ +LF +  + SIL AN + +S     N  + +   +
Sbjct: 34  CSSNDTCNALLGYTLYTDLKVSEVASLFQVDPI-SILLANAIDISYPDVENHILPSKLFL 92

Query: 137 KIPFPCKCSNGTGISNKKPI---YTVQPGDGLDHIARDVFSALVTYEQIAAVNNIPDVNK 193
           KIP  C C +G     +K +   Y  +P D L  IA  V+  LV+ EQI   N++ D + 
Sbjct: 93  KIPITCSCVDGI----RKSVSTHYKTRPSDNLGSIADSVYGGLVSAEQIQEANSVNDPSL 148

Query: 194 ILVGQELQIPLPCSCDDVGGEKV--VHYGHVVESGSSLDLIAQEYGTTMTTLMTLNSITN 251
           + VG  L IPLPC+C +     +  V+  +VV+   +L  IA+ Y TT+T LM +N++  
Sbjct: 149 LDVGTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLVGIARRYSTTITDLMNVNAM-G 207

Query: 252 ASSLKAGQVLDVPLKG 267
           A  + +G +L VPL  
Sbjct: 208 APDVSSGDILAVPLSA 223


>AT1G77630.1 | Symbols:  | peptidoglycan-binding LysM
           domain-containing protein | chr1:29173726-29175387
           FORWARD
          Length = 423

 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 13/194 (6%)

Query: 79  CTTSGQCNALIDYVAPNSTTISDIRTLFSIKNLRSILGANNLPLSTS--PNQTIAAAQTI 136
           C++   CN+L+ Y       ++++ +LF +  + S+L +N++ +S     N  + A   +
Sbjct: 31  CSSKDTCNSLLGYTLYTDLKVTEVASLFQVDPV-SMLLSNSIDISYPDVENHVLPAKLFL 89

Query: 137 KIPFPCKCSNGTGISNKKPI---YTVQPGDGLDHIARDVFSALVTYEQIAAVNNIPDVNK 193
           KIP  C C +G     +K +   Y  +  D L  IA  V+  LV+ EQI   N+  D++ 
Sbjct: 90  KIPITCSCVDGI----RKSLSTHYKTRTSDTLGSIADSVYGGLVSPEQIQVANSETDLSV 145

Query: 194 ILVGQELQIPLPCSCDDVGGEKV--VHYGHVVESGSSLDLIAQEYGTTMTTLMTLNSITN 251
           + VG +L IPLPC+C +   E +  ++  +VV    ++  IA+ + T++T L  +N++  
Sbjct: 146 LDVGTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTMAGIAKRFSTSVTDLTNVNAM-G 204

Query: 252 ASSLKAGQVLDVPL 265
           A  +  G +L VPL
Sbjct: 205 APDINPGDILAVPL 218


>AT2G23770.1 | Symbols:  | protein kinase family protein /
           peptidoglycan-binding LysM domain-containing protein |
           chr2:10120242-10122080 REVERSE
          Length = 612

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 17/173 (9%)

Query: 85  CNALIDYVA-PNSTTISDIRTLFSIKNLRSILGANNLPLSTSPNQTIAAAQTIKIPFPCK 143
           C A + + + P+ +T++ I +LFS+    S++ + N     SP+ +  + Q + IP  C 
Sbjct: 55  CQAYVIFRSTPSFSTVTSISSLFSVD--PSLVSSLN---DASPSTSFPSGQQVIIPLTCS 109

Query: 144 CSNGTGISNKKPIYTVQPGDGLDHIARDVFSALVTYEQIAAVNNIPDVNKILVGQELQIP 203
           C+     SN    YT+QP D    IA D    L T + +A  NN+     +  G  + +P
Sbjct: 110 CTGDDSQSN--ITYTIQPNDSYFAIANDTLQGLSTCQALAKQNNVSS-QSLFPGMRIVVP 166

Query: 204 LPCSC------DDVGGEKVVHYGHVVESGSSLDLIAQEYGTTMTTLMTLNSIT 250
           + C+C      ++ G + ++ Y  V E   ++ +I+  +G   +  +  N ++
Sbjct: 167 IRCACPTAKQINEDGVKYLMSYTVVFE--DTIAIISDRFGVETSKTLKANEMS 217