Jatropha Genome Database
- JcCA0261891.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0261891.10 + phase: 0
(370 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23880.1 | Symbols: | F-box family protein | chr3:8622061-86... 93 3e-19
AT4G12560.2 | Symbols: | F-box family protein | chr4:7441815-74... 92 4e-19
AT4G12560.1 | Symbols: | F-box family protein | chr4:7441815-74... 92 4e-19
AT3G16210.1 | Symbols: | F-box family protein | chr3:5494533-54... 86 5e-17
AT3G07870.1 | Symbols: | F-box family protein | chr3:2510871-25... 83 4e-16
AT4G22390.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 2e-15
AT1G47790.1 | Symbols: | F-box family protein | chr1:17600004-1... 74 2e-13
AT3G06240.1 | Symbols: | F-box family protein | chr3:1887336-18... 73 3e-13
AT4G38870.1 | Symbols: | F-box family protein | chr4:18132583-1... 72 4e-13
AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483... 70 3e-12
AT5G18160.1 | Symbols: | F-box family protein | chr5:6002770-60... 68 8e-12
AT1G33530.1 | Symbols: | F-box family protein | chr1:12159884-1... 68 1e-11
AT1G12870.1 | Symbols: | S locus F-box-related / SLF-related | ... 67 2e-11
AT3G23960.1 | Symbols: | F-box family protein | chr3:8657736-86... 64 1e-10
AT1G76830.1 | Symbols: | F-box family protein | chr1:28844644-2... 64 2e-10
AT3G16590.1 | Symbols: | F-box family protein | chr3:5649932-56... 64 2e-10
AT3G10240.1 | Symbols: | F-box protein-related | chr3:3166698-3... 62 9e-10
AT3G18910.1 | Symbols: | F-box family protein | chr3:6521760-65... 61 1e-09
AT1G13200.1 | Symbols: | F-box family protein | chr1:4507221-45... 61 1e-09
AT1G77650.1 | Symbols: | F-box family protein | chr1:29181110-2... 60 3e-09
AT2G43445.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 3e-09
AT4G21240.1 | Symbols: | F-box family protein | chr4:11322411-1... 59 4e-09
AT1G50870.1 | Symbols: | F-box family protein | chr1:18855147-1... 59 7e-09
AT5G10340.1 | Symbols: | F-box protein-related / SLF-related | ... 58 9e-09
AT3G13680.1 | Symbols: | F-box family protein | chr3:4477534-44... 58 1e-08
AT3G22650.1 | Symbols: ATSFL61, SFL61, CEG | CEG (CEGENDUO) | ch... 57 2e-08
AT3G17280.1 | Symbols: | F-box family protein | chr3:5903453-59... 57 2e-08
AT2G31470.1 | Symbols: | F-box family protein | chr2:13407492-1... 56 3e-08
AT5G15660.1 | Symbols: | F-box family protein | chr5:5095652-50... 56 3e-08
AT3G17480.1 | Symbols: | F-box family protein | chr3:5983199-59... 56 4e-08
AT4G04690.1 | Symbols: | F-box family protein (FBX15) | chr4:23... 55 5e-08
AT2G43260.1 | Symbols: | F-box family protein / S locus-related... 55 7e-08
AT1G11270.2 | Symbols: | F-box family protein | chr1:3785715-37... 55 1e-07
AT1G11270.1 | Symbols: | F-box family protein | chr1:3785715-37... 55 1e-07
AT3G17620.1 | Symbols: | F-box family protein | chr3:6026498-60... 55 1e-07
AT4G09190.1 | Symbols: | F-box family protein | chr4:5855176-58... 54 1e-07
AT1G53550.1 | Symbols: | F-box family protein | chr1:19983411-1... 54 2e-07
AT3G51171.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 2e-07
AT2G21930.1 | Symbols: | F-box family protein | chr2:9347947-93... 53 3e-07
AT3G25460.1 | Symbols: | F-box family protein | chr3:9231581-92... 52 6e-07
AT2G17310.1 | Symbols: SON1 | SON1 (SUPPRESSOR OF NIM1-1 1) | ch... 52 7e-07
AT3G17530.1 | Symbols: | F-box family protein | chr3:6000860-60... 52 9e-07
AT1G46840.1 | Symbols: | F-box family protein | chr1:17270185-1... 50 2e-06
AT4G13060.1 | Symbols: | F-box family protein-related | chr4:76... 50 2e-06
AT3G16880.1 | Symbols: | F-box protein-related | chr3:5766733-5... 50 2e-06
AT1G55070.1 | Symbols: | F-box family protein | chr1:20551452-2... 50 3e-06
AT3G52320.1 | Symbols: | F-box family protein | chr3:19403020-1... 50 3e-06
AT2G04920.1 | Symbols: | F-box family protein (FBX9) | chr2:172... 50 3e-06
AT4G10190.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Cyclin-lik... 49 4e-06
AT3G23950.1 | Symbols: | F-box family protein | chr3:8652908-86... 49 7e-06
>AT3G23880.1 | Symbols: | F-box family protein |
chr3:8622061-8623155 REVERSE
Length = 364
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 46/317 (14%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHL---------SSTKDPLSL 54
LP E++EEILL+L VK+L VC W SLI F +H +STK P +
Sbjct: 14 LPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYGV 73
Query: 55 LTVRGTGMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIG--FFQIVGSVNGLVCLRVNSV 112
+T + +H Y H G +G ++Q+VG+ +GLVC
Sbjct: 74 ITTSRYHLKSCC---IHSLYNASTVYVSEH---DGELLGRDYYQVVGTCHGLVC------ 121
Query: 113 TDQFFINID-TLILWNPAIKRSFNVPKPNYS---GETIV--GFGYDSRTDDYKLVRIVKQ 166
F ++ D +L LWNP IK + + E +V GFGYD DDYK+V +++Q
Sbjct: 122 ---FHVDYDKSLYLWNPTIKLQQRLSSSDLETSDDECVVTYGFGYDESEDDYKVVALLQQ 178
Query: 167 NRCYRAQVELFSLNMGSWKALTDIIPPLKSTDWD-SPIFSNGVLHWLTYEKDEHFNYYNK 225
+ + +++S W++ T + D S I+ NG L+W +
Sbjct: 179 RHQVKIETKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYINGTLNWAATSS----SSSWT 234
Query: 226 ILGFNMSDEEFNEITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDSTSSQNHLWV 285
I+ ++MS +EF E+ P C ++ +++ + G + +WV
Sbjct: 235 IISYDMSRDEFKELPGP---VCCGRGCFTMTLGDLRGCLSMVCYCKG------ANADVWV 285
Query: 286 MKDYNVIGSWTILSTLP 302
MK++ + SW+ L ++P
Sbjct: 286 MKEFGEVYSWSKLLSIP 302
>AT4G12560.2 | Symbols: | F-box family protein |
chr4:7441815-7443157 FORWARD
Length = 413
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 181/411 (44%), Gaps = 85/411 (20%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLS---STKDPLSLLTV 57
M +P ++V +I L+L KTL+ C + K LI P FI HL T D L +L +
Sbjct: 1 MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMIL-L 59
Query: 58 RGTGMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFF 117
RG ++ Y D + + + P + G ++ GS NGL+ L NS TD
Sbjct: 60 RG-----ALRLY-SVDLDSLDSVSDVEHPMKRG--GPTEVFGSSNGLIGLS-NSPTD--- 107
Query: 118 INIDTLILWNPAIKRSFNVPK-----PNYS---GETIVGFGYDSRTDDYKLVRIVK---- 165
L ++NP+ ++ +P P+ S G G GYDS +DDYK+VR+V+
Sbjct: 108 -----LAVFNPSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKID 162
Query: 166 ---QNRC-YRAQVELFSLNMGSWKALTDIIPPLKSTDW---------DSPIFSNGVLHWL 212
+ C + +V++FSL SWK + + ++ + + + LHW+
Sbjct: 163 SEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWV 222
Query: 213 TYEKDEHFNYYNKILGFNMSDEEFNEITLPENLAYAN----------PWCLSLFAHKGSS 262
+ +N I+ F+++ EEF + PE +A N CL L + S
Sbjct: 223 L-PRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQS 281
Query: 263 SIAVSQFVVGEQDSTSSQNHLWVMKDYNVIGSWTILSTL--PVEIGC-----PLGYN-GT 314
+ V W+MK+YNV SWT + T+ P + PL Y+
Sbjct: 282 YVDV-----------------WMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDK 324
Query: 315 ALLIWNWWSHRIITFELQSSKSKDI-IDLQRSSYNIHLDPYVESLVLLDKG 364
++ + +++ F+L+S K + I SSY+ L V SLVL KG
Sbjct: 325 KKVLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAEL--VVSSLVLGCKG 373
>AT4G12560.1 | Symbols: | F-box family protein |
chr4:7441815-7443157 FORWARD
Length = 413
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 181/411 (44%), Gaps = 85/411 (20%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLS---STKDPLSLLTV 57
M +P ++V +I L+L KTL+ C + K LI P FI HL T D L +L +
Sbjct: 1 MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMIL-L 59
Query: 58 RGTGMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFF 117
RG ++ Y D + + + P + G ++ GS NGL+ L NS TD
Sbjct: 60 RG-----ALRLY-SVDLDSLDSVSDVEHPMKRG--GPTEVFGSSNGLIGLS-NSPTD--- 107
Query: 118 INIDTLILWNPAIKRSFNVPK-----PNYS---GETIVGFGYDSRTDDYKLVRIVK---- 165
L ++NP+ ++ +P P+ S G G GYDS +DDYK+VR+V+
Sbjct: 108 -----LAVFNPSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKID 162
Query: 166 ---QNRC-YRAQVELFSLNMGSWKALTDIIPPLKSTDW---------DSPIFSNGVLHWL 212
+ C + +V++FSL SWK + + ++ + + + LHW+
Sbjct: 163 SEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWV 222
Query: 213 TYEKDEHFNYYNKILGFNMSDEEFNEITLPENLAYAN----------PWCLSLFAHKGSS 262
+ +N I+ F+++ EEF + PE +A N CL L + S
Sbjct: 223 L-PRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQS 281
Query: 263 SIAVSQFVVGEQDSTSSQNHLWVMKDYNVIGSWTILSTL--PVEIGC-----PLGYN-GT 314
+ V W+MK+YNV SWT + T+ P + PL Y+
Sbjct: 282 YVDV-----------------WMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDK 324
Query: 315 ALLIWNWWSHRIITFELQSSKSKDI-IDLQRSSYNIHLDPYVESLVLLDKG 364
++ + +++ F+L+S K + I SSY+ L V SLVL KG
Sbjct: 325 KKVLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAEL--VVSSLVLGCKG 373
>AT3G16210.1 | Symbols: | F-box family protein |
chr3:5494533-5495615 REVERSE
Length = 360
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 107/248 (43%), Gaps = 39/248 (15%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSF--IYRHLSSTKDPLSLLTVRGTG 61
LP EL EIL++LS+K L VCK W LI P F YR +S P ++
Sbjct: 5 LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMS----PAKFVSFYDKN 60
Query: 62 MDPSIEFYLHFDDEGFNEY--KKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFIN 119
FY+ D EG + KL P S I V +G +C+ + +
Sbjct: 61 ------FYM-LDVEGKHPVITNKLDFPLDQSMIDESTCVLHCDGTLCVTLKN-------- 105
Query: 120 IDTLILWNPAIKRSFNVPKPN-YSGETIVGFGYDSRTDDYKLVRIVKQNRCYRAQVELFS 178
TL++WNP K+ VP P Y I+GFGYD DDYK+V + +R + +F
Sbjct: 106 -HTLMVWNPFSKQFKIVPNPGIYQDSNILGFGYDPVHDDYKVVTFI--DRLDVSTAHVFE 162
Query: 179 LNMGSWKALTDIIPPLKSTDWD----SPIFSNGVLHWLTYEKDEHFNYYNKILGFNMSDE 234
GSW I P DW F + L+W+ Y IL FN+S
Sbjct: 163 FRTGSWGESLRISYP----DWHYRDRRGTFLDQYLYWIAYRSSAD----RFILCFNLSTH 214
Query: 235 EFNEITLP 242
E+ ++ LP
Sbjct: 215 EYRKLPLP 222
>AT3G07870.1 | Symbols: | F-box family protein |
chr3:2510871-2512124 FORWARD
Length = 417
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 146/326 (44%), Gaps = 59/326 (18%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGT 60
+ LP +++ +I +L + ++ VC+ W S++ + SS P LL
Sbjct: 25 LESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHC--- 81
Query: 61 GMDPSIEFYLHF----DDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQF 116
D I LHF ++E + KK + F S++ F +VGS NGL+CL +D
Sbjct: 82 --DSPIRNGLHFLDLSEEEKRIKTKKFTLRF-ASSMPEFDVVGSCNGLLCL-----SDSL 133
Query: 117 FINIDTLILWNPAIKRSFNVPKPN---YSGETIVGFGYDSRTDDYKLVRIV-------KQ 166
+ D+L L+NP S +P+ + + E + GFG+ T +YK+++IV
Sbjct: 134 Y--NDSLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNN 191
Query: 167 NRCYR---------AQVELFSLNMG------SWKALTDIIPPLKSTDWDSPIFSNGVLHW 211
N YR ++V++ +L+ SW++L P K S NG LH+
Sbjct: 192 NGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGK--APYKFVKRSSEALVNGRLHF 249
Query: 212 LTYEKDEHFNYYNKILGFNMSDEEFNEITLPE--NLAYANPWCLSLFAHKGSSSIAVSQF 269
+T + + K + F++ DEEF EI P+ L N ++L KG AV
Sbjct: 250 VTRPRRHVPD--RKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNL---KG-CLCAVVYG 303
Query: 270 VVGEQDSTSSQNHLWVMKDYNVIGSW 295
G+ D +WVMK Y V SW
Sbjct: 304 NYGKLD-------IWVMKTYGVKESW 322
>AT4G22390.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
F-box associated type 1 (InterPro:IPR017451); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT4G12560.2); Has 662 Blast hits to 662
proteins in 37 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 662; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr4:11813757-11815074 REVERSE
Length = 402
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 142/333 (42%), Gaps = 64/333 (19%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLS---STKDPLSLLTV 57
M E P +L+ E+ L+L TL+ C + K SLI SP F+ HL T + L +L +
Sbjct: 1 MAECPTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLETGEHLMIL-L 59
Query: 58 RGTGMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFF 117
RG + ++E D N H P Q GF ++ GS NG++ L NS D
Sbjct: 60 RGPRLLRTVEL-----DSPENVSDIPH-PLQAG--GFTEVFGSFNGVIGL-CNSPVDLAI 110
Query: 118 INIDTLILWNPAIKRSFNVPKPNYSGETIV-GFGYDSRTDDYKLVRIV-------KQNRC 169
N T + I+ + P+ + + E + G GYDS DD+K+VRIV K+
Sbjct: 111 FNPSTRKIHRLPIE-PIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCKLKEGKKKFP 169
Query: 170 YRAQVELFSLNMGSWKALTDIIP-------------PLKSTDWDSPIFSNGVLHWLTYEK 216
+V++FSL SWK + + P + + N LHW+ +
Sbjct: 170 CPVEVKVFSLKKNSWKRVCLMFEFQILWISYYYHLLPRRGYG----VVVNNHLHWI-LPR 224
Query: 217 DEHFNYYNKILGFNMSDEEFNEITLPENLAYANPW-------CLSLFAHKGSSSIAVSQF 269
+ +N I+ ++++ ++ ++ P+ L + C+ L + S + V
Sbjct: 225 RQGVIAFNAIIKYDLASDDIGVLSFPQELYIEDNMDIGVLDGCVCLMCYDEYSHVDV--- 281
Query: 270 VVGEQDSTSSQNHLWVMKDYNVIGSWTILSTLP 302
WV+K+Y SWT L +P
Sbjct: 282 --------------WVLKEYEDYKSWTKLYRVP 300
>AT1G47790.1 | Symbols: | F-box family protein |
chr1:17600004-17601173 REVERSE
Length = 389
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 53/266 (19%)
Query: 2 TELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFI--YRHLSSTKDPLSLLTVRG 59
+ P +L EILL+L VK+++ V K W+S+I P FI Y SST+ L L +
Sbjct: 23 SSFPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSL-LFCFKQ 81
Query: 60 TGMDPSIEFYL---HFDDEGFNEYKKLHVPFQGSTIGFFQI-----------VGSVNGLV 105
+ D F + H+D ++ + I FQ+ SV+GL+
Sbjct: 82 S--DKLFVFSIPKHHYDSNSSSQ----------AAIDRFQVKLPQEFSYPSPTESVHGLI 129
Query: 106 CLRVNSVTDQFFINIDTLILWNPAIKRSFNVPKPNYS-GETIVGFGYDSRTDDYKLVRIV 164
C V + T+I+WNP++++ +PKP S E V GYD +K+V +
Sbjct: 130 CFHV----------LATVIVWNPSMRQFLTLPKPRKSWKELTVFLGYDPIEGKHKVVCLP 179
Query: 165 KQNRCYRAQVELFSLNMGSWKALTDIIPPLKSTD-WDSPIFSNGVLHWLTYEKDEHFNYY 223
+ C QV SW+ + + D W I GV++++ Y Y+
Sbjct: 180 RNRTCDECQVLTLGSAQKSWRTVKTKHKHRSTNDTWGRCI--KGVVYYIAYV------YH 231
Query: 224 NK---ILGFNMSDEEFNEITLP-ENL 245
+ I+ F++ E+F+ I LP EN+
Sbjct: 232 TRVWCIMSFHVKSEKFDMIKLPLENI 257
>AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD
Length = 427
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 138/346 (39%), Gaps = 81/346 (23%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLS----------------- 46
LP E++ EILL+L K++ V K + +L P F HL
Sbjct: 36 LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIV 95
Query: 47 STKDPLSL-LTVRGTGM--------------DPSI--EFYLHFDDEGFNEYKKLHVPFQG 89
S+ + SL G G+ DPSI E ++ + + +++ +
Sbjct: 96 SSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNA 155
Query: 90 STI--GFFQIVGSVNGLVCLRVNSVTDQFFINIDTLILWNPAIKRSFNVPKPNYSGETI- 146
+ + +IVGS NGLVC+ + L+NP S +P+ N+ +++
Sbjct: 156 KSYRRNWVEIVGSSNGLVCISPGE---------GAVFLYNPTTGDSKRLPE-NFRPKSVE 205
Query: 147 --------VGFGYDSRTDDYKLVRIVKQNRCYRAQVELFSLNMGSWKALTDIIPPLKSTD 198
GFG+D TDDYKLV++V + ++SL SW+ + ++
Sbjct: 206 YERDNFQTYGFGFDGLTDDYKLVKLVATSEDI-LDASVYSLKADSWRRICNLNYEHNDGS 264
Query: 199 WDSPIFSNGVLHWLTYEKDEHFNYYNKILGFNMSDEEFNEITLPENLAYANPWCLSLFAH 258
+ S + NG +HW+ E + ++ F++ EEF E+ +P+
Sbjct: 265 YTSGVHFNGAIHWVFTESRHN---QRVVVAFDIQTEEFREMPVPDEAE------------ 309
Query: 259 KGSSSIAVSQFVVGEQDST--------SSQNHLWVMKDYNVIGSWT 296
S S FVVG + + +WVM +Y SW+
Sbjct: 310 --DCSHRFSNFVVGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWS 353
>AT4G38870.1 | Symbols: | F-box family protein |
chr4:18132583-18133863 REVERSE
Length = 426
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 140/312 (44%), Gaps = 46/312 (14%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLS-STKDPLSLLTVRGTGM 62
LP +L+ EIL KLS+K L+ V K W S+IR P F+ L+ S K P SL+ V
Sbjct: 53 LPVDLIMEILKKLSLKPLIRFLCVSKLWASIIRDPYFMKLFLNESLKRPKSLVFVFRAQS 112
Query: 63 DPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGF---------FQIVGSVNGLVCLRVNSVT 113
SI +H + E S+I + I SV+GL+C S
Sbjct: 113 LGSIFSSVHL--KSTREISSSSSSSSASSITYHVTCYTQQRMTISPSVHGLICYGPPS-- 168
Query: 114 DQFFINIDTLILWNPAIKRSFNVPKPNYSGETIVGF-GYDSRTDDYKLVRI------VKQ 166
+L+++NP +RS +PK I + GYD +YK+V I ++
Sbjct: 169 --------SLVIYNPCTRRSITLPKIKAGRRAINQYIGYDPLDGNYKVVCITRGMPMLRN 220
Query: 167 NRCYRAQVELFSLNM--GSWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYN 224
R ++++ +L SW+ + DIIPP + I NGVL++ + + +
Sbjct: 221 RRGLAEEIQVLTLGTRDSSWRMIHDIIPPHSPVSEELCI--NGVLYYRAFIGTKLNE--S 276
Query: 225 KILGFNMSDEEFNEITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDSTSSQNHLW 284
I+ F++ E+F+ I +P N + L ++G + V+ + TS LW
Sbjct: 277 AIMSFDVRSEKFDLIKVPCNFRSFS----KLAKYEGKLA------VIFYEKKTSGIIGLW 326
Query: 285 VMKDYNVIGSWT 296
+++D + G W+
Sbjct: 327 ILEDASN-GEWS 337
>AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483829
FORWARD
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 25/263 (9%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDP-LSLLTVRGTGM 62
+P E+VEEIL++L VK+L V K+W +LI S F RH++ K LL V +
Sbjct: 39 IPNEIVEEILVRLPVKSLTRFQTVSKHWRTLITSKYFGKRHMALEKSKGCKLLFVCDDFV 98
Query: 63 DPSIEFY----LHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLR--------VN 110
D + + + + +E + F+G GF I S +GLVC +N
Sbjct: 99 DRAEDTLFLKTVALEKTSVSEGDEQAFEFEGYK-GFLDISESCDGLVCFYDTTRAVEVMN 157
Query: 111 SVTDQF----FINIDTLILWNPAIKRSFN-VPKPNYSGETI-----VGFGYDSRTDDYKL 160
T F I L ++ P + V PN + + +G G DS + YKL
Sbjct: 158 PATTMFIELPLSRIQQLCIYKPNPEVELEPVQDPNPVLDPVMTCSQIGVGKDSVSGSYKL 217
Query: 161 VRIVKQNRCYRAQVELFSLNMGSWKALTDIIPPLKSTDWDS-PIFSNGVLHWLTYEKDEH 219
V + + E+ L+ W+ + D P+F+NG L+WLT +++ +
Sbjct: 218 VWMYNTSPATPPTCEVLDLDGKKWRFVNTTSLDHHQILCDQRPVFANGSLYWLTGDEEGY 277
Query: 220 FNYYNKILGFNMSDEEFNEITLP 242
K++ ++ E F I P
Sbjct: 278 ATTQTKLIVLDLHTEMFQVIQTP 300
>AT5G18160.1 | Symbols: | F-box family protein |
chr5:6002770-6003909 FORWARD
Length = 379
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 106/242 (43%), Gaps = 25/242 (10%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGTGMD 63
+P ++ EIL +L K+++ V K W+S+ +P FI T P LL R D
Sbjct: 34 IPLDITIEILSRLPAKSIVRSRSVSKLWSSITTTPEFIKHRSKKTSPPCVLLIFR--KHD 91
Query: 64 PSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFINIDTL 123
I F ++ + H+ + GF + + SV+GL+CL + L
Sbjct: 92 KLIVFSSPQHQNTYSHVQDYHIEIPKN--GFIRRLDSVHGLICLEGSK----------QL 139
Query: 124 ILWNPAIKRSFNVPKPNYSGE--TIVGF-GYDSRTDDYKLVRIVKQNRCYRAQVELFSLN 180
++ NP +KR F +P+P +G+ + GF GY+ YK + IV R + QV +
Sbjct: 140 VICNPTLKRFFPLPEPQGTGDEYNVGGFLGYEPIEGKYKALCIV---RGWNTQVLTLEIQ 196
Query: 181 MGSWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKILGFNMSDEEFNEIT 240
SW+ + D I NGV+++ D + I GF++ EEF I
Sbjct: 197 E-SWRVTKPGYTHWPTKDTGRCI--NGVIYYKAIIFDRVPRHV--IFGFDLRYEEFTHIE 251
Query: 241 LP 242
P
Sbjct: 252 FP 253
>AT1G33530.1 | Symbols: | F-box family protein |
chr1:12159884-12161314 FORWARD
Length = 441
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 106/254 (41%), Gaps = 40/254 (15%)
Query: 3 ELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTV----- 57
ELP LVEEIL +L VK L+ + K W SLI S +HL + L +
Sbjct: 96 ELPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESDHLAEKHLRLLEKKYGLKEIKITVE 155
Query: 58 RGTGMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFF 117
R T I+F+ G N + ++ GS NGLVC+ +
Sbjct: 156 RSTSKSICIKFFSR--RSGMNA-------INSDSDDLLRVPGSCNGLVCV--------YE 198
Query: 118 INIDTLILWNP--AIKRSFNVPKPNYSGETIVGFGYDSRTDDYKLVRIVKQNRCYRAQVE 175
++ + L NP + R+ P+ + VGFG D T YK++ + + R
Sbjct: 199 LDSVYIYLLNPMTGVTRTLTPPR---GTKLSVGFGIDVVTGTYKVMVLYGFD---RVGTV 252
Query: 176 LFSLNMGSWKALTDIIPPLK----STDWDSPIFSNGVLHWLTYEKDEHFNYYNKILGFNM 231
+F L+ W+ P+ T +P+F NG L WL +++IL ++
Sbjct: 253 VFDLDTNKWRQRYKTAGPMPLSCIPTPERNPVFVNGSLFWLLASD------FSEILVMDL 306
Query: 232 SDEEFNEITLPENL 245
E+F ++ P ++
Sbjct: 307 HTEKFRTLSQPNDM 320
>AT1G12870.1 | Symbols: | S locus F-box-related / SLF-related |
chr1:4387129-4389110 REVERSE
Length = 416
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 104/267 (38%), Gaps = 31/267 (11%)
Query: 2 TELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHL-----SSTKDPLSLLT 56
+ LP ++VEEI LKL VK L+ + K W S + S F RHL S P ++
Sbjct: 31 SSLPDDVVEEIFLKLPVKALMRFKSLSKQWRSTLESCYFSQRHLKIAERSHVDHPKVMII 90
Query: 57 VRGTGMDPSIEFYL-------HFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRV 109
D I F FN + H P S S +G+ C+
Sbjct: 91 TEKWNPDIEISFRTISLESVSFLSSALFNFPRGFHHPIYAS--------ESCDGIFCIHS 142
Query: 110 NSVTDQFFINIDTLILWN-PAIKRSFNVPKPNYSGETI-----VGFGYDSRTDDYKLVRI 163
D + +N T P + + K N + +T+ V + DYKLV +
Sbjct: 143 PKTQDIYVVNPATRWFRQLPPARFQIFMHKLNPTLDTLRDMIPVNHLAFVKATDYKLVWL 202
Query: 164 VKQNRCYRAQVELFSLNMGSWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYY 223
+ + E+F +W+ LT IP + P +NG L+W T E +N
Sbjct: 203 YNSDASRVTKCEVFDFKANAWRYLT-CIPSYRIYHDQKPASANGTLYWFT----ETYNAE 257
Query: 224 NKILGFNMSDEEFNEITLPENLAYANP 250
K++ ++ E F + P +A + P
Sbjct: 258 IKVIALDIHTEIFRLLPKPSLIASSEP 284
>AT3G23960.1 | Symbols: | F-box family protein |
chr3:8657736-8658944 FORWARD
Length = 402
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 34/303 (11%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGTGMD 63
+P +L+ EI LKL VK++ C V K+W ++ F L+ + LL D
Sbjct: 31 IPIDLLIEIFLKLPVKSIATCRSVSKFWTYVLGRQDFTELFLTKSSSRPQLLF--ACAND 88
Query: 64 PSIEFYLHFDDEGFNE-------YKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQF 116
F+ + +E Y HVP + +G +NGLV LR +
Sbjct: 89 NGYFFFSSNQPQNLDENSSPIAAYPLTHVP-KSRDLG-----PPINGLVSLRGERILKGR 142
Query: 117 FINIDTLILWNPAIKRSFNVPKPNYSGE---TIVGF-GYDSRTDDYKLVRI----VKQNR 168
+D I++NP+ S +PK N + + T+ F GYD YK++ + K +
Sbjct: 143 IRPVDVSIIYNPSTGESLTLPKTNMTRKKIYTVTSFLGYDPIEKQYKVLSMNMSYEKHPK 202
Query: 169 CYRAQVELFSLNMGSWKALTDII---PPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNK 225
C QV SW+ + + PLK +S I NGVL++L +
Sbjct: 203 CEGYQVLTLGTGKLSWRMIKCCLNYQHPLK----NSEICINGVLYYLAMVNGSSWP-TRA 257
Query: 226 ILGFNMSDEEFNEITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDSTSSQNHLWV 285
++ F++ E FN + + L+Y + + G + + Q LWV
Sbjct: 258 VVCFDIRSEMFNFMEVYRELSYTTTL---INYNNGKLGMLMGQEAHKTISGICRSFELWV 314
Query: 286 MKD 288
++D
Sbjct: 315 LED 317
>AT1G76830.1 | Symbols: | F-box family protein |
chr1:28844644-28845765 FORWARD
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 35/272 (12%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLS-STKDPLSLLTVRGTGM 62
LP EL EILL++S +L+ C+ V K S+IR+ SF +LS S + P L GT +
Sbjct: 10 LPEELKREILLRMSPNSLVTCSRVSKKLASMIRTKSFKELYLSRSMRCPRVLFAANGT-I 68
Query: 63 DPSIEFYLHFDDEG---FNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFIN 119
P + F + E + +++ QG F V GL+CL
Sbjct: 69 TPHVLFTSFQEKEKPLLSSGEQRIITSLQGE----FLFSPPVRGLICLVERESA------ 118
Query: 120 IDTLILWNPAIKRSFNVP--KPNYSGETIVGFGYDSRTDDYKLVRIVKQNRCYRAQVEL- 176
+++ NP + +P + + + I GYD + D +K++ C R + E
Sbjct: 119 --RIVICNPGTTKFLALPIVEADETTRIITHLGYDEQKDVFKVL-------CTRTKPETP 169
Query: 177 -FSLNMGSWKAL-TDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKILGFNMSDE 234
L +GS K +I+ T + +F G L++L F+ + I+ F++ E
Sbjct: 170 HLVLTVGSGKEPWREIVCKFPHTVIGAGVFYRGTLYYLA-----AFHSKSIIMTFDVRSE 224
Query: 235 EFNEITLPENLAY-ANPWCLSLFAHKGSSSIA 265
F IT P+ + W L ++ +G ++
Sbjct: 225 TFMPITSPDGVDLNQGSWRLVNYSQQGGFALV 256
>AT3G16590.1 | Symbols: | F-box family protein |
chr3:5649932-5651056 REVERSE
Length = 374
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 136/332 (40%), Gaps = 66/332 (19%)
Query: 2 TELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVR--- 58
T+LP EL +EILL++ +L VCK WN+L FI HL+ + L T +
Sbjct: 3 TKLPLELEDEILLRVPPLSLTRFRTVCKRWNTLFNDQRFINNHLACVRPQFILRTEKDSK 62
Query: 59 ----GTGMDPSIEFY-LHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVT 113
G +D S+E L+ + +G N KKL V + + L+C +
Sbjct: 63 IYSIGINIDDSLEVRELNLETQGPN--KKLKV--------YRNLFYCDGFLLCPAL---- 108
Query: 114 DQFFINIDTLILWNPAIKRSFNVPKPNYSGETIVGFGYDSRTDDYKLVRIVKQNRCYRAQ 173
+D + +WNP +++ +P S + G GYD+R + K +I+ Y ++
Sbjct: 109 ------LDEVAVWNPWLRKQTKWIEPKRSRFNLYGLGYDNRRPE-KCYKILGFGYGYSSE 161
Query: 174 -----------VELFSLNMGSWKALTDIIPPLKSTDW--DSP---IFSNGVLHWLTYEKD 217
V +F +WK L DW SP + NG L+W+ +
Sbjct: 162 INGSYNRINPRVSVFEFETNAWKDLK-----FGLFDWHLRSPRTVLSLNGTLYWIAVRCE 216
Query: 218 EHFNYYNKILGFNMSDEEFNEIT-LPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDS 276
+ + I F+ S E F LP + + L +F + V EQ
Sbjct: 217 SGGDGF--IQSFDFSREMFEPFCLLPCKNDFGDTQILEVFRG--------DRLSVLEQCP 266
Query: 277 TSSQNHLWVMK-----DYNVIGSWTILSTLPV 303
T+++ +WV K D + SW +L T+ +
Sbjct: 267 TTNKIKIWVTKNKISGDRKELVSWRLLMTVSI 298
>AT3G10240.1 | Symbols: | F-box protein-related |
chr3:3166698-3167867 FORWARD
Length = 389
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 137/322 (42%), Gaps = 45/322 (13%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGTGMD 63
+P +LV EILL+L K++ V K W+S+ P FI +L +T+ P LL +
Sbjct: 27 IPLDLVSEILLRLPEKSVARFRCVSKPWSSITTEPYFI--NLLTTRSPRLLLCFKANEKF 84
Query: 64 PSIEFYLHFDDEGFNEYKKLHVPFQ---------GSTIGFFQIVGSVNGLVCLRVNSVTD 114
H + F + K H Q + +F SVNGL+C + ++
Sbjct: 85 FVSSIPQH--RQTFETWNKSHSYSQLIDRYHMEFSEEMNYFPPTESVNGLICFQESA--- 139
Query: 115 QFFINIDTLILWNPAIKRSFNVPKPN-YSGETIVGFGYDSRTDDYKLVRIVKQNRCYRAQ 173
LI+WNP+ ++ +PKPN S + + GYD +K++ + +
Sbjct: 140 -------RLIVWNPSTRQLLILPKPNGNSNDLTIFLGYDPVEGKHKVMCMEFSATYDTCR 192
Query: 174 VELFSLNMGSWKALTDIIP---PLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKILGFN 230
V L +GS + L + +S +DS NGV++ + Y KD ++ F+
Sbjct: 193 V----LTLGSAQKLWRTVKTHNKHRSDYYDSGRCINGVVYHIAYVKDMCVWV---LMSFD 245
Query: 231 MSDEEFNEITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDSTSSQNHLWVMKDYN 290
+ E F+ I LP + + + L + G + VG + + LW+++ +N
Sbjct: 246 VRSEIFDMIELPSSDVHKD----VLIDYNGRLA------CVGREIIEKNGIRLWILEKHN 295
Query: 291 VIGSWTILSTLPVEIGCPLGYN 312
S L+ L V I L N
Sbjct: 296 KWSSKDFLAPL-VHIDKSLSTN 316
>AT3G18910.1 | Symbols: | F-box family protein |
chr3:6521760-6522926 FORWARD
Length = 388
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 132/328 (40%), Gaps = 29/328 (8%)
Query: 3 ELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIY-RHLSSTKDPLSLLTVRGTG 61
+LP +LVEEIL ++ +L CK WN L + + +H + L++R
Sbjct: 7 QLPNDLVEEILCRVPATSLRRLRSTCKAWNRLFKGDRILASKHFEKSAKQFRSLSLRNDY 66
Query: 62 MDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFINID 121
I F LH + +L P ++ F+I ++ L +S D+
Sbjct: 67 RIFPISFNLHGNSPSLELKSELIDPHSKNSAAPFEISRVIHCEGLLLCSSQLDE-----S 121
Query: 122 TLILWNPAIKRSFNVPKPNY--SGETI-VGFGY--DSRT--DDYKLVRIVKQNRCYRAQV 174
+++WNP + + ++ G + VG+ Y D R+ YKL+ + + +
Sbjct: 122 RVVVWNPLTGETRWIRTGDFRQKGRSFDVGYYYQKDKRSWIKSYKLLCYYRGTKYF---- 177
Query: 175 ELFSLNMGSWKALTDIIPPLKSTDWDSPIFS-NGVLHWLTYEKDEHFNYYNKILGFNMSD 233
E++ + SW+ L DII P S + S G +W E +L F+
Sbjct: 178 EIYDFDSDSWRILDDIIAPRGSIGYSELSVSLKGNTYWFAKGVTEERPRTISLLKFDF-- 235
Query: 234 EEFNEITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDSTSSQNHLWVMK--DYNV 291
+ E ++P L Y + LF S + + V Q SS+ +WV D
Sbjct: 236 --YTEKSVPVLLPYQSR---RLFQASSLSVVREDKLSVLLQLDQSSKTEIWVTNVIDETT 290
Query: 292 IG--SWTILSTLPVEIGCPLGYNGTALL 317
G SWT + L + +G +G+ L
Sbjct: 291 KGAVSWTKVLALDLSPHLQIGNDGSFFL 318
>AT1G13200.1 | Symbols: | F-box family protein |
chr1:4507221-4508528 REVERSE
Length = 435
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 113/269 (42%), Gaps = 44/269 (16%)
Query: 2 TELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKD-----PLSLLT 56
+ LP +++EEI L+ VK L+ + K W S I S SF RHL+ K P +L
Sbjct: 41 SSLPNDVLEEIFLRFPVKALIRLKSLSKQWRSTIESRSFEERHLTIAKKAFVDHPKVMLV 100
Query: 57 -----VRGTGMDP--SIEFYLH-FDDEGFNEYKKLHVPFQGSTIGFFQ---IVGSVNGLV 105
+RGTG+ P I F L + + +L+ P GFF I S +GL
Sbjct: 101 GEEDPIRGTGIRPDTDIGFRLFCLESASLLSFTRLNFP-----QGFFNWIYISESCDGLF 155
Query: 106 CLRVNSVTDQFFINIDT--LILWNPA----IKRSFNVPKP--NYSGETIVGFGYDSRTDD 157
C+ + +N T L L PA + FN + N ++I + T D
Sbjct: 156 CIHSPKSHSVYVVNPATRWLRLLPPAGFQILIHKFNPTEREWNVVMKSIFHLAFVKAT-D 214
Query: 158 YKLVRIVKQNR---------CYRAQVELFSLNMGSWKALTDIIPPLKSTDWDSPIFSNGV 208
YKLV + ++ + E+F +W+ L P + + P +NG
Sbjct: 215 YKLVWLYNCDKYIVDASSPNVGVTKCEIFDFRKNAWRYLA-CTPSHQIFYYQKPASANGS 273
Query: 209 LHWLTYEKDEHFNYYNKILGFNMSDEEFN 237
++W T E +N +++ F++ E F
Sbjct: 274 VYWFT----EPYNERIEVVAFDIQTETFR 298
>AT1G77650.1 | Symbols: | F-box family protein |
chr1:29181110-29182261 FORWARD
Length = 383
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGTGMD 63
LP ++VEE L K +++L+ C CK +L FIY HL +++ L + + +
Sbjct: 6 LPSDVVEEFLFKTPIESLVLCKPTCKQLYALCNDKRFIYNHLDLSEERLMRIYLDKIKII 65
Query: 64 PSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFINIDTL 123
+ + L VP + ++ F ++ L+C D++ + L
Sbjct: 66 NPVTL----------DILCLPVPAEFDSVT-FNVIHCDGLLLCRWTTRGLDRY----NKL 110
Query: 124 ILWNPAIKRSFNVPKPNYSGET-IVGFGY--DSRTDDYKLVRIVKQNRCYRAQVELFSLN 180
+WNP I + + G T + GFGY + D YK++R+ +R + E++ L
Sbjct: 111 AVWNP-ISGQLKFVESFFHGVTDLYGFGYANNGPRDSYKILRVSY----WRKECEIYDLK 165
Query: 181 MGSWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKILGFNMSDEEFNEIT 240
W+A + + + +T + +F NG ++W+ ++ I F+ S E F I
Sbjct: 166 SKLWRAFSATLDWVVNTPQQN-VFMNGNMYWIADTLGDNIR-ETFIQSFDFSKETFKPIC 223
Query: 241 LPENLAYANPWCLSLFA---HKGSSSIAVSQFVV 271
+ Y N +L H+ + S+ +S F V
Sbjct: 224 ---SFPYENKIIDTLIMNGIHRIADSVILSSFRV 254
>AT2G43445.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G43440.1); Has 621
Blast hits to 612 proteins in 23 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 619;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr2:18041511-18042995 FORWARD
Length = 405
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 37/239 (15%)
Query: 7 ELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGT------ 60
EL+EEI L L +K++L V K W S++ S F+ R + K+ +L
Sbjct: 16 ELLEEIFLGLPLKSILKFKTVSKQWRSILESNLFVERRRTLQKNHPKILAAYNCDYCTRP 75
Query: 61 GMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFINI 120
G+ P +F EG E LH ++ + +GLVC +T+ + N+
Sbjct: 76 GILPKSQF------EGDEEIVYLHTDATQPSM-------TCDGLVC-----ITEPGWFNV 117
Query: 121 DTLILWNPAIKRSFNVPKPNYSGETIVGFGYDSRTDDYKLVRIVKQNRCYRAQVELFSLN 180
L + ++R P P ++GFG D T YK+VR+ + CY + + +
Sbjct: 118 --LNVSTGQLRRFLPGPDPGPQANWLLGFGRDKVTGKYKIVRMCFHD-CY--EFGILDIE 172
Query: 181 MGSWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKILGFNMSDEEFNEI 239
G W L PP + NG ++WL + IL ++ E FN +
Sbjct: 173 SGEWSKLMS--PPHIMRVGSKSVCVNGSIYWL------QISVSYIILALDLHQETFNGV 223
>AT4G21240.1 | Symbols: | F-box family protein |
chr4:11322411-11323664 FORWARD
Length = 417
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 32/261 (12%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLT-VRGTGM 62
+P +++ +ILL+L K+ + V K W S+ P FI + L L+ V+ M
Sbjct: 36 IPLDMIPDILLRLPAKSAVRFRIVSKLWLSITTRPYFIRSFAFPSSTRLCLMACVKARDM 95
Query: 63 DPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVG-SVNGLVCLRVNSVTDQFFINID 121
I + H DD + + + + ++ SVNGLVC F +
Sbjct: 96 RLFISLHQH-DDGSYAHVDRCEI--KSPKHDYYNPSSESVNGLVC----------FGDFY 142
Query: 122 TLILWNPAIKRSFNVPKPNYSGETIVGF-----GYDSRTDDYKLVRIVKQNRCYRAQVEL 176
+++WNP++++ +P+P T+ F GYD D YK++ I + + +
Sbjct: 143 NIVVWNPSMRQHVTLPEPK-PHSTVRYFIRSCLGYDPVEDKYKVLSISGYHNGNHDPL-V 200
Query: 177 FSLN-MGSWKALT----DIIPPLKSTDWDSPIFSNGVLHW---LTYEKDEHFNYYNKILG 228
F+L SW+ + DI P + + I NG +++ + ++ D+ FN+ N ++
Sbjct: 201 FTLGPQESWRVIQNSPLDIPLPTGGSRVGTCI--NGHVYYEAQIRFKVDDIFNFENILMS 258
Query: 229 FNMSDEEFNEITLPENLAYAN 249
F++ E+FN I P + N
Sbjct: 259 FDVRYEKFNTIKKPADPTLRN 279
>AT1G50870.1 | Symbols: | F-box family protein |
chr1:18855147-18856337 FORWARD
Length = 396
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 19/251 (7%)
Query: 5 PGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFI--YRHLSSTKDPLSLLTVRGTGM 62
P +L+ EILL+L VK++L V K W S P F Y SST+ P L+ +
Sbjct: 32 PLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEARSSTR-PSLLMFFKNKDK 90
Query: 63 DPSIEFYLHFDDEGFNEYKKLHVP---FQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFIN 119
F H + HV + F SV+GL+ R+++
Sbjct: 91 LFVFTFPHHNQNSKETHSYSQHVDSYHIKYPKYCCFPFTESVHGLISFRISTKP------ 144
Query: 120 IDTLILWNPAIKRSFNVPKPNYSGETIVGF-GYDSRTDDYKLVRIVKQNRCYRAQVELFS 178
I+WNP +++ +PKP S + + F GYD +KL+ + + N +V
Sbjct: 145 ----IIWNPTMRQFLILPKPEKSWKGLSVFLGYDPVEGKHKLMCMNRDNTSDECRVLTLG 200
Query: 179 LNMGSWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKILGFNMSDEEFNE 238
W+ + + + NGV+++ Y F I+ F + E+F+
Sbjct: 201 SAQEKWRRIKSNLKHRSILRYYGQCI-NGVIYYQAYIDQMGFISNPTIMSFEVRSEKFDT 259
Query: 239 ITLPENLAYAN 249
ITLP ++AN
Sbjct: 260 ITLPSG-SFAN 269
>AT5G10340.1 | Symbols: | F-box protein-related / SLF-related |
chr5:3253122-3255045 FORWARD
Length = 445
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 110/269 (40%), Gaps = 46/269 (17%)
Query: 4 LPGELVE-EILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYR----HLS-STKDP----LS 53
LP +++E I+++L VKTLL V K W S I+SPSF R HLS S+ DP +S
Sbjct: 69 LPHDVIEYHIMVRLDVKTLLKFKSVSKQWMSTIQSPSFQERQLIHHLSQSSGDPHVLLVS 128
Query: 54 LLTVRGTGMDPSI---EFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVN 110
L DPSI E F E ++ P++ +F S +GL+CL
Sbjct: 129 LYDPCARQQDPSISSFEALRTFLVESSAASVQIPTPWEDKL--YFVCNTSCDGLICLFS- 185
Query: 111 SVTDQFFINIDTLILWNPAIKRSFNVPKPNYS------GET---------IVGFGYDSRT 155
F + ++++ NP + PK NY GE GFG D +
Sbjct: 186 ------FYELPSIVV-NPTTRWHRTFPKCNYQLVAADKGERHECFKVACPTPGFGKDKIS 238
Query: 156 DDYKLVRIVKQNRC----YRAQVELFSLNMGSWKALTDIIPPLKSTDWDSPIFSNGVLHW 211
YK V + E+F +W+ + P L D P++ +G LHW
Sbjct: 239 GTYKPVWLYNSAELDLNDKPTTCEVFDFATNAWRYVFPASPHLILHTQD-PVYVDGSLHW 297
Query: 212 LTYEKDEHFNYYNKILGFNMSDEEFNEIT 240
T E +L ++ E F I+
Sbjct: 298 FTALSHEG---ETMVLSLDLHSETFQVIS 323
>AT3G13680.1 | Symbols: | F-box family protein |
chr3:4477534-4478721 REVERSE
Length = 395
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGT 60
M +LPG+LVEEIL ++ + +L C+ WNSL +S + K + G
Sbjct: 4 MGDLPGDLVEEILSRVPLTSLRAIRSTCQKWNSLSKS------QICGRKATAAENKFLGF 57
Query: 61 GMDPSIEFYLHFDDEGF-NEYKKLHVPFQGSTIGFFQI----VGSVNGLVCLRVNSVTDQ 115
M S + FD +G N+ +L P QI V +GLV + T
Sbjct: 58 MMKDSRVCSMKFDLQGIRNDDGELVEPSIKQVSKLDQIEVSQVFHCDGLVLCIIKDNTG- 116
Query: 116 FFINIDTLILWNPAIKRSFNV-PKPNYSGETIVGFGYDSRTDDYKLVRIV----KQNRCY 170
L++WNP + ++ + P+ NY E GYD+ ++K++RI NR +
Sbjct: 117 -------LLVWNPYLGQTRWIHPRNNYQIEDRYALGYDNNR-NHKILRIFDLYPSSNRVF 168
Query: 171 RAQVELFSLNMGSWKALTDIIPPLKSTDWD 200
+V FS N SWK L D+IP +WD
Sbjct: 169 GYEVYDFSSN--SWKVL-DVIP-----EWD 190
>AT3G22650.1 | Symbols: ATSFL61, SFL61, CEG | CEG (CEGENDUO) |
chr3:8014809-8015960 FORWARD
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 126/302 (41%), Gaps = 41/302 (13%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGTGMD 63
LP +++EEI ++ V+ L CK W +L++ FIY++L ++ +
Sbjct: 9 LPIDIIEEICCRIPVEYLTQFKLTCKQWFALLKDKRFIYKYLDLFQEQERFI-------- 60
Query: 64 PSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFINIDTL 123
I+ + D +P + + + +GL+ R + + + L
Sbjct: 61 -RIDRIVQIIDPVKGARSSSPIPQEFDNVAQISTMVHCDGLLLCRCKNERSRSY----KL 115
Query: 124 ILWNPAIKR-SFNVPKPNYSGETIVGFGYDSRT-DDYKLVRIVKQNRCYRAQVELFSLNM 181
+WNP + R + P YS GFGYD+ D+YKL+RI + ++E S
Sbjct: 116 AVWNPFLSRVKWIEPMDFYSSNDFYGFGYDNVCRDEYKLLRI------FDGEIEDESEIA 169
Query: 182 GSWKALTDIIPPLKSTDW----DSPIFSNGVLHWLTYEKDEHFNYYNKIL--GFNMSDEE 235
GS++ I KS W D+ + G ++W+ H+N +I F+ S E
Sbjct: 170 GSYEPKIQIY-DFKSDSWRIVDDTRVSVKGNMYWIA-----HWNNRPEIFIQSFDFSTET 223
Query: 236 FNEITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDSTSSQNHLWVM-KDYNVIGS 294
F + NL P+ ++ SS+ + + Q + + +W+ K + + S
Sbjct: 224 FKIVC---NL----PFECNVLDTAALSSLRGDRLSLLHQSGETMKIEVWITNKLSDEVVS 276
Query: 295 WT 296
WT
Sbjct: 277 WT 278
>AT3G17280.1 | Symbols: | F-box family protein |
chr3:5903453-5904613 REVERSE
Length = 386
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 112/261 (42%), Gaps = 41/261 (15%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGT 60
+++LP +L+ EIL +L K++ CK W +L + P F+ + L L
Sbjct: 4 ISDLPYDLLPEILSRLPTKSIPKLKTTCKKWYALFKDPKFVEKKLGKAARETVFLMNHEV 63
Query: 61 GMDPSIEFYLHFDDEGFNEYKK----LHVPFQGSTIGFFQIVGSVNGL-VCLRVNSVTDQ 115
SI +H +G++ L +P +GS + F+I NGL +C +N
Sbjct: 64 N---SISVDIHGIPKGYSVSMDFTGTLTIP-EGSDLEIFRI-HHCNGLFLCATMNC---- 114
Query: 116 FFINIDTLILWNPAIKR-SFNVPKPNYSGETI--VGFGYD--SRTDDYKLVRIVKQNRCY 170
L++WNP + ++ +P+ Y + I +G G D S YK++R N+
Sbjct: 115 ------RLVVWNPCTGQITWIIPRTRYDSDDIYALGCGDDKSSSLHSYKILRCCDDNQ-K 167
Query: 171 RAQVELFSLNMGSWKALTDIIPPLKSTDWDSPIFSNGV-----LHWLTYEKDEHFNYYNK 225
+ E++ + SW+ L + + I NGV +W Y D+ K
Sbjct: 168 KPVSEIYDFSSSSWRVLDGVTA-------NCFIECNGVALKESAYW--YASDKRETPKGK 218
Query: 226 -ILGFNMSDEEFNEITLPENL 245
IL F+ + E F + LP N
Sbjct: 219 FILRFDFATERFARLCLPLNF 239
>AT2G31470.1 | Symbols: | F-box family protein |
chr2:13407492-13408655 REVERSE
Length = 387
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 131/312 (41%), Gaps = 41/312 (13%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLS-STKDPLSLLTVRGTGM 62
+P +LV EI + VK++ C V K W S++R P F +L+ S P L +
Sbjct: 25 IPIDLVIEIFSRSPVKSIARCRCVSKLWASILRLPYFTELYLTKSCARPRLLFACQ---K 81
Query: 63 DPSIEFYLHFDDEGFNEYKK-------LHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQ 115
+ F+ NE + +PF G F I+ + GLV +R +
Sbjct: 82 HRELFFFSTPQPHNPNESSSPLAASFHMKIPFDGR----FNIISPIGGLVFVRYEQILKG 137
Query: 116 FFINIDTLILWNPAIKRSFNVPKPNYSGETIVG---FGYDSRTDDYKLVRIVKQNRCYRA 172
+ NP+ +S +PKP + + I G FGYD +K++ + + Y+
Sbjct: 138 RKTPEFVSAICNPSTGQSLTLPKPK-TRKRIWGTSHFGYDPIEKQFKVLSMNIGDGVYK- 195
Query: 173 QVELFSLNMG----SWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKILG 228
E + L +G SW+ + IP + + I NGVL++ K + F+ I+
Sbjct: 196 --EHYVLTLGTENLSWRRIECSIPHVHGSKG---ICINGVLYYRA--KADMFSGTLMIVC 248
Query: 229 FNMSDEEFNEITL--PENLAYANPWCLSLFAHKGSSSIAVSQF---VVGEQDSTSSQNHL 283
F++ E+F+ I + P + L+ +G S I +F V+G+ + H
Sbjct: 249 FDVRFEKFSYIKILKPTTTLISYNGKLASLVWEGPSYICGKRFEMWVLGD-----PEKHE 303
Query: 284 WVMKDYNVIGSW 295
W+ Y + W
Sbjct: 304 WLKHTYELRPRW 315
>AT5G15660.1 | Symbols: | F-box family protein |
chr5:5095652-5097041 FORWARD
Length = 438
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 37/259 (14%)
Query: 3 ELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFI--YRHLSSTKDPLSLLTVRGT 60
E+P +LV EIL +L +K++ V K W + IRSP F YR SS+ +P +L+
Sbjct: 27 EIPHDLVIEILERLPLKSVARFLTVSKLWATTIRSPDFRKSYRGGSSS-EPRTLIVSDLN 85
Query: 61 GMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFF------QIVGSVNGLVCLRVNSVTD 114
+P+ + LHF F T F VNGL+ V TD
Sbjct: 86 FKEPNPK--LHF----FRPSISSPSFLSSLTCPFTYPRHEEYYYHHVNGLIS--VGYGTD 137
Query: 115 QFFINIDTLILWNPAIKRSFNVPKPNYSGETIVG-FGYDSRTDDYKLVRIVKQNRCY--- 170
Q I+ NP + +P+P + ++ FGYDS +D YK++ + ++ R +
Sbjct: 138 Q--------IVINPTTGKFITLPRPKTRRKLVISFFGYDSVSDQYKVLCMTERLRGHPEE 189
Query: 171 ---RAQVELFSLNMGSWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKIL 227
+ QV SWK + I P + W++ + NGV++++ + F ++
Sbjct: 190 ASSQHQVYTLGAKQKSWKMINCSI-PHRPWSWNA-VCINGVVYYIAKTGEGMFR--RCLM 245
Query: 228 GFNMSDEEFNEIT-LPENL 245
F++ + + T LPE +
Sbjct: 246 RFDLKSDNLDLCTILPEEI 264
>AT3G17480.1 | Symbols: | F-box family protein |
chr3:5983199-5984320 FORWARD
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 146/347 (42%), Gaps = 66/347 (19%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHL-SSTKDPLSLL--TV 57
M+ L +LVE+IL ++ +L+ CK WN+++ FI +H ++ K+ L +L ++
Sbjct: 8 MSVLTEDLVEDILSRVPATSLVRLRSTCKQWNAILNDRRFIKKHFDTAEKEYLDMLLRSL 67
Query: 58 RGTGM-----------DPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVC 106
R + M DPSIE + +G + + F++ NGL+
Sbjct: 68 RVSSMSVNLHGLHDNIDPSIELKRELNLKG--------LLCNSGKVESFEVF-HCNGLL- 117
Query: 107 LRVNSVTDQFFINIDTLILWNPAIKRSFNVPKPNYSGE-TIVGFGYDSRT--DDYKLVRI 163
F N T+++WNP ++ + + + GY+++ DYK++R
Sbjct: 118 ---------LFTNTSTIVVWNPCTGQTKWIQTESANTRYHKYALGYENKNLCRDYKILRF 168
Query: 164 VKQNRCYRAQVELFSLNMGSWKALTDIIPPLKSTDWDSPIFSNGV-----LHWLT---YE 215
+ + ++E++ N SW+ L + D++ I S G+ +W+ +E
Sbjct: 169 LDDGTNF--ELEIYEFNSSSWRVLDSV-----EIDFELDIGSQGMSVKGNTYWIVIDDHE 221
Query: 216 KD-EHFNYYNKILGFNMSDEEFN-EITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGE 273
D E N + + F+ + E F + LP + W + + SS+ + V
Sbjct: 222 VDGELVNCF--LTSFDFTRERFGPHVCLP----FQTSWYSDVIS---LSSVREERLSVLF 272
Query: 274 QDSTSSQNHLWVMKDY--NVIGSWTILSTLPVEIGCPLGYNGTALLI 318
+ S +WV D ++ SW+ L V++ YNG I
Sbjct: 273 HEEDSLTMEIWVTNDITDTIVTSWSKF--LRVDLYTHRFYNGVTFFI 317
>AT4G04690.1 | Symbols: | F-box family protein (FBX15) |
chr4:2373999-2375135 REVERSE
Length = 378
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 34/247 (13%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGTG-- 61
LP ELVEEIL K ++L CK W +I S F+Y HL + + + T
Sbjct: 11 LPFELVEEILKKTPAESLNRFKSTCKQWYGIITSKRFMYNHLDHSPERFIRIDDHKTVQI 70
Query: 62 MDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFINID 121
MDP + D + ++ H F +V ++C+ +S ++
Sbjct: 71 MDPMTGIFS--DSPVPDVFRSPH--------SFASMVHCDGLMLCICSDSSYER--TREA 118
Query: 122 TLILWNPAIKR-SFNVPKPNYSGETIVGFGYDSRT-DDYKLVRIVKQNRCYRAQVELFSL 179
L +WNP K+ + P +Y G GYD+ ++YK+VR + E++
Sbjct: 119 NLAVWNPVTKKIKWIEPLDSYYETDYFGIGYDNTCRENYKIVRFSGPMSFDDTECEIYEF 178
Query: 180 NMGSWKALTDIIPPLKSTDWDSPIFSNGV-----LHWLTYEKDEHFNYYNKILGFNMSDE 234
SW+ L + WD GV ++W+ K++ IL F+ S E
Sbjct: 179 KSDSWRT-------LDTKYWDVYTQCRGVSVKGNMYWIADTKEKF------ILRFDFSME 225
Query: 235 EFNEITL 241
F + +
Sbjct: 226 TFKNVCV 232
>AT2G43260.1 | Symbols: | F-box family protein / S locus-related |
chr2:17983744-17985089 REVERSE
Length = 420
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 91/244 (37%), Gaps = 46/244 (18%)
Query: 19 KTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGTGMDPSIEFYLHFDDEGFN 78
K++L C V K W SL+ S F RH+S +L + EG
Sbjct: 28 KSILKCRIVSKQWRSLLESSRFAERHMSLQNSRRRILAAYNCDCGGRRKLLPESRFEGDE 87
Query: 79 EYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFINIDTLILWNPAIKRSFNVP- 137
E LH ++ + G++C F D +I+ NP+ + P
Sbjct: 88 EIVYLHCDASRPSM-------TCQGVIC----------FPEQDWIIVLNPSTSQLRRFPS 130
Query: 138 -------------KPNYSGETIVGFGYDSRTDDYKLVRI------VKQNRCYRAQVELFS 178
K G ++GFG D YK+VR+ V+Q + +
Sbjct: 131 GLNHNCRFRIGLWKTFSPGNWVMGFGRDKVNGRYKVVRMSFAFWRVRQEEPV-VECGVLD 189
Query: 179 LNMGSWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKILGFNMSDEEFNE 238
++ G W+ L+ PP + NG ++WL H +IL ++ EEF++
Sbjct: 190 VDTGEWRKLSP--PPYVVNVGSKSVCVNGSIYWL------HIQTVYRILALDLHKEEFHK 241
Query: 239 ITLP 242
+ +P
Sbjct: 242 VPVP 245
>AT1G11270.2 | Symbols: | F-box family protein |
chr1:3785715-3786653 REVERSE
Length = 312
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 109/273 (39%), Gaps = 56/273 (20%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGTGMD 63
LP ++V IL +L V++LL V W S I S F R L + + RG
Sbjct: 35 LPHDVVGLILERLPVESLLRFKCVSNQWKSTIESQCFQERQL------IRRMESRG---- 84
Query: 64 PSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQI--------VGSVNGLVCLRVNSVTDQ 115
P + DDE ++Y + V F S + F+ GS GL+C+
Sbjct: 85 PDVLVVSFADDE--DKYGRKAV-FGSSIVSTFRFPTLHTLICYGSCEGLICI-------- 133
Query: 116 FFINIDTLILWNPAIKRSFNVP-------------KPNYSGET-IVGFGYDSRTDDYKLV 161
+ I+ NPA K + P K Y T + FG D YK V
Sbjct: 134 -YCVYSPNIVVNPATKWHRSCPLSNLQQFLDDKFEKKEYDFPTPKLAFGKDKLNGTYKQV 192
Query: 162 RIVKQNRCYR----AQVELFSLNMGSWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKD 217
+ + +R E+F + +W+ + P + D+ P++S+G +HWLT K+
Sbjct: 193 WLYNSSE-FRLDDVTTCEVFDFSNNAWRYVHPA-SPYRINDYQDPVYSDGSVHWLTEGKE 250
Query: 218 EHFNYYNKILGFNMSDEEFNEITLPENLAYANP 250
+KIL F++ E F + L +P
Sbjct: 251 ------SKILSFHLHTETFQVLCEAPFLRERDP 277
>AT1G11270.1 | Symbols: | F-box family protein |
chr1:3785715-3786653 REVERSE
Length = 312
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 109/273 (39%), Gaps = 56/273 (20%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGTGMD 63
LP ++V IL +L V++LL V W S I S F R L + + RG
Sbjct: 35 LPHDVVGLILERLPVESLLRFKCVSNQWKSTIESQCFQERQL------IRRMESRG---- 84
Query: 64 PSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQI--------VGSVNGLVCLRVNSVTDQ 115
P + DDE ++Y + V F S + F+ GS GL+C+
Sbjct: 85 PDVLVVSFADDE--DKYGRKAV-FGSSIVSTFRFPTLHTLICYGSCEGLICI-------- 133
Query: 116 FFINIDTLILWNPAIKRSFNVP-------------KPNYSGET-IVGFGYDSRTDDYKLV 161
+ I+ NPA K + P K Y T + FG D YK V
Sbjct: 134 -YCVYSPNIVVNPATKWHRSCPLSNLQQFLDDKFEKKEYDFPTPKLAFGKDKLNGTYKQV 192
Query: 162 RIVKQNRCYR----AQVELFSLNMGSWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKD 217
+ + +R E+F + +W+ + P + D+ P++S+G +HWLT K+
Sbjct: 193 WLYNSSE-FRLDDVTTCEVFDFSNNAWRYVHPA-SPYRINDYQDPVYSDGSVHWLTEGKE 250
Query: 218 EHFNYYNKILGFNMSDEEFNEITLPENLAYANP 250
+KIL F++ E F + L +P
Sbjct: 251 ------SKILSFHLHTETFQVLCEAPFLRERDP 277
>AT3G17620.1 | Symbols: | F-box family protein |
chr3:6026498-6027694 REVERSE
Length = 398
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 63/271 (23%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSS------------- 47
M++LP +L+EE L ++ VK+L CK W +L + SF +HL+
Sbjct: 2 MSDLPRDLLEERLSRVPVKSLREARFTCKNWKTLSKKRSFTKKHLAQEATSRESEFKVVM 61
Query: 48 ---TKDPLSLLTVRG--TGMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVN 102
K L+ + +RG G DPSI N KL V G+ V +
Sbjct: 62 VLHCKVYLTSINLRGIHNGFDPSI-----------NRQAKL-VSLNGTDQIDISEVYHCD 109
Query: 103 GLVCLRVNSVTDQFFINIDTLILWNPAIKRS--FNVPKPNYSGE-TIVGFGYDSRTDD-- 157
GL+ T +++WNP ++ P++ + I GY+ R
Sbjct: 110 GLLLCISKDYT--------RVVVWNPYRSQTLWLKPSSPDHRMDWYICAIGYEKRKSSLR 161
Query: 158 YKLVRIVKQNRCYRAQVELFSLNMGSWKALTDIIPPLKSTDWDSPIFSNGV-----LHWL 212
YK++R V + E++ L SW+ L D+ ++DW+ ++ GV +W
Sbjct: 162 YKVLRFVDFAEEEFVEYEIYELKSNSWRVL-DV-----TSDWEVEFYARGVSLKGNTYWF 215
Query: 213 TYEKDE-------HFNYYNKILGFNMSDEEF 236
+K H Y+ +L FN + E F
Sbjct: 216 ATDKFPEISSNLIHSVYF--LLCFNFTSERF 244
>AT4G09190.1 | Symbols: | F-box family protein |
chr4:5855176-5856327 FORWARD
Length = 383
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 126/299 (42%), Gaps = 38/299 (12%)
Query: 3 ELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGTGM 62
+P +L+ EI+ L K+++ V K W+S+I +P F S + R
Sbjct: 21 HIPLDLIVEIVSSLPAKSIVRFRSVSKLWSSIITTPDFT-----------SSVVTRSLSS 69
Query: 63 DPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFINIDT 122
P + D+ F +H + FQ NG + R SV ++ T
Sbjct: 70 RPCVLLIFQKHDKLFFFASPVHQKKTCPNVENFQYTIPNNGKL-QRCESVHGLIYLETST 128
Query: 123 LILW--NPAIKRSFNVPK-PNYSGETIVGF-GYDSRTDDYKLVRIVKQNRCYRAQVELFS 178
+++ NP K F +PK + G + GF GYD YK++ I+K+ R ++ + +
Sbjct: 129 NVMFIRNPITKSFFTLPKLDSKEGRPLTGFLGYDPINGKYKVLCILKE----RNKIGILT 184
Query: 179 LNMG-SWKALTD-IIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKILGFNMSDEEF 236
L SW+ L+ + K T + I +GV+++ D I+ F++ E+F
Sbjct: 185 LGAQESWRILSKGFLSHYKVTGYAKCI--DGVIYYEGSFGDG-LRQELAIMSFDLRSEKF 241
Query: 237 NEITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDSTSSQNHLWVMKDYNVIGSW 295
+ I P+ + A W +++G ++ S +S LW+++D + W
Sbjct: 242 SLIKHPKKSSIATCWS----SYEGRLALV---------SSIASGVSLWILEDADNHKQW 287
>AT1G53550.1 | Symbols: | F-box family protein |
chr1:19983411-19984637 FORWARD
Length = 408
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 130/308 (42%), Gaps = 39/308 (12%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHL---SSTKDPLSLLTVRGT 60
+P +LV IL +LS++ + C V K W+S+IR P+ Y L S+ P L +
Sbjct: 35 IPVDLVINILSRLSLECIARCRCVSKLWSSIIRRPN--YNQLFPVKSSATPRLLFVFKVA 92
Query: 61 GMDPSIEFYLHFDDEGFNEYKKLHVPF---QGSTIGFFQIVGSVNGLVCLRVNSVTDQFF 117
E + + + FN V + S+ F Q+ V+GL+C +
Sbjct: 93 R-----ELFFNSSPQHFNPNNSSLVATSLQKTSSTRFSQLCRPVHGLIC------SQHIE 141
Query: 118 INIDTLILWNPAIKRSFNVPKPN---YSGETIV-----GFGYDSRTDDYKLVRIV---KQ 166
N ++ NP +PK + ETI+ FGYD +K++RI +
Sbjct: 142 ENYLFALISNPTTGEYIALPKQRMEEMNSETIIEKVRYSFGYDPIDKQFKVLRITWLHRG 201
Query: 167 NRCYRAQVELFSLNMG--SWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYN 224
+ + ++ ++ +L G SW+ + + DS I NGVL++ + +
Sbjct: 202 SHEWSSEYQVLTLGFGNISWRNTQCCV--VHYLLEDSGICINGVLYYPARLDNRKYT--- 256
Query: 225 KILGFNMSDEEFNEITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQ-DSTSSQNHL 283
I+ F++ E+F+ ++ +++ SL +KG + + E +++ H
Sbjct: 257 -IVCFDVMTEKFSFTSIDKDMTIMTNLSFSLIDYKGKLGACICDHTLFELWVLENAEEHK 315
Query: 284 WVMKDYNV 291
W YN+
Sbjct: 316 WSKNIYNM 323
>AT3G51171.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G16555.1); Has
537 Blast hits to 535 proteins in 15 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 537;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:19010856-19011626 FORWARD
Length = 256
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLT---- 56
M LP EL E+IL +L+ ++L+ VCK WN L SFI H + +T
Sbjct: 1 MVPLPWELEEDILSRLAAQSLVRFRSVCKRWNYLFDEKSFIKNHFARACPQFIFMTDSNI 60
Query: 57 -----VRGTGMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNS 111
+ G+DP+I+ + D G +P++ + I L C S
Sbjct: 61 YSIEIIGLDGVDPTIKLRV-LDSSG--------IPYRDWKFAYITITACDGFLFCNSWAS 111
Query: 112 VTDQFFINIDTLILWNPAIKRSFNVPKPNYSGETIVGFGYDSRTDDYKLVRIVKQNRC-- 169
F WNP +K+ + + G + G GYD+ T D K+ +I+ C
Sbjct: 112 PKGTAF--------WNPWLKQVKWIEYED-KGFNVCGLGYDN-TRDGKVYKILGYLMCRP 161
Query: 170 -------YRAQVELFSLNMGSWKALTDIIPPLKSTDW---DSPIFS---NGVLHWLT 213
Y +V ++ ++K + + + DW D FS NG L+WL+
Sbjct: 162 EDGSSYVYHQRVAIYDCASHAFKFIE-----ISNKDWFLTDVTRFSVSLNGNLYWLS 213
>AT2G21930.1 | Symbols: | F-box family protein |
chr2:9347947-9348954 REVERSE
Length = 335
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 100 SVNGLVCLRVNSVTDQFFINIDTLILWNPAIKRSFNVPKPNYSGETIV-GFGYDSRTDDY 158
SV+GL+C + ++ LI+ NP+ +RS +PK + + E I GYD DY
Sbjct: 59 SVHGLIC---HGPPSTLIVSSPRLIVSNPSTRRSIILPKIDANHECIYHHMGYDPIDGDY 115
Query: 159 KLVRIVK-----QNRCYRAQVELFSLNMG-SWKALTDIIPPLKSTDWDSP-IFSNGVLHW 211
K++ ++K Q R ++++F+L G SW+ + D PP D+P + NGVL++
Sbjct: 116 KVLCMMKGMHVYQRRYLAKELQVFTLRKGNSWRMVED-FPPHCLCHEDTPDLCINGVLYY 174
Query: 212 LTYEKDEHFNYYNKILGFNMSDEEFNEI 239
+ D N+ ++ F++ E+F+ I
Sbjct: 175 VAM-LDTASNH--AVMSFDVRSEKFDLI 199
>AT3G25460.1 | Symbols: | F-box family protein |
chr3:9231581-9232666 REVERSE
Length = 361
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 32/305 (10%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGT 60
M ELP +L+ EIL ++ +L CK WN L F +H +L +
Sbjct: 3 MPELPEDLLVEILCRVPATSLKRLRSTCKLWNHLYNDKRFKSKHCHKAPRQSLILMWKNF 62
Query: 61 GMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQ---IVGSVNGLVCLRVNSVTDQFF 117
G SI L +L++ S++G F+ + + L+C+ V + +
Sbjct: 63 GFS-SISINLQ-RVSPIEVTGELNLIDHHSSLGMFRNSPLCQTSGLLLCVNVEKINTR-- 118
Query: 118 INIDTLILWNPAIKRS--FNVPKPNYSGETIVGFGYDSRTDDYKLVRIVKQNRCYRAQVE 175
L++WNP ++ + Y +G Y + D +I+ + E
Sbjct: 119 -----LVVWNPCTGKTKWIQHRRMGYICNYALG-SYQDKKSDNNSYKILSHGIYGGQEFE 172
Query: 176 LFSLNMGSWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYE-KDEHFNYYNKILGFNMSDE 234
++ +N SW+ L D+ + S+ + + G +W + D+ + + ++ F+ + E
Sbjct: 173 IYEINSNSWRIL-DVT--VDSSLYIENVSLKGKTYWFATDGNDKPCDLF--LICFDYTTE 227
Query: 235 EFNEITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDSTSSQNHLWVMKDYNVIGS 294
F + LP + Y F + S + + V Q S +S+ +WV N IG
Sbjct: 228 RFERLCLPYQIPY--------FRNTSLSVVKEEKLSVLLQPSLTSKTQIWVT---NKIGE 276
Query: 295 WTILS 299
+LS
Sbjct: 277 AKVLS 281
>AT2G17310.1 | Symbols: SON1 | SON1 (SUPPRESSOR OF NIM1-1 1) |
chr2:7531212-7532324 FORWARD
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 54/307 (17%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLT------- 56
LP EL E+IL +L +L+ V K+WNSL +FI HLS ++ +LT
Sbjct: 3 LPWELEEDILSRLPPISLVRFRTVSKHWNSLFNDKTFINNHLSRSRPEFIILTNSKIYSV 62
Query: 57 --VRGTGMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTD 114
+ +DP+I +LH I + I L +N+ +
Sbjct: 63 DIIDHNNIDPTI---------------RLH------EIPTYDIHSRGTDLNRTIINTCDE 101
Query: 115 QFFINI----DTLILWNPAIKRSFNVPKPNYSGETIVGFGYDSRTDDYKLVRIVKQNRCY 170
F N + LWNP +++ + N + G GYD+ + K+ +I+ C+
Sbjct: 102 FLFYNYRYWDNMTALWNPWLRQVRWIEYANQEF-CVFGLGYDNSRPE-KVYKILGHLFCH 159
Query: 171 -----RAQVELFSLNMGSWKAL---TDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNY 222
+V ++ S + + D P+ T S + NG L+W E+ Y
Sbjct: 160 GKVLRDQKVVIYECASDSLRFIDRPEDDDWPITETAKRSNVSLNGNLYWFGCSNYENDEY 219
Query: 223 YNKILGFNMSDEEFNEIT-LPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDSTSSQN 281
Y +I F+ S E+F LP ++++ L L +KG +F + +Q S + +
Sbjct: 220 YIRI--FDFSTEDFKPFCLLPCQMSHSTDE-LVLAVYKG------DRFSLLKQCSVTREI 270
Query: 282 HLWVMKD 288
+WV K+
Sbjct: 271 GVWVTKE 277
>AT3G17530.1 | Symbols: | F-box family protein |
chr3:6000860-6002026 FORWARD
Length = 388
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 31/296 (10%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSST--KDPLSLLTVR 58
+++LP +L EIL ++ K+L CK W +L R PSF+ ++ ++ + L+ R
Sbjct: 3 ISDLPHDLESEILSRVPAKSLAKWKTTCKRWYALFRDPSFVKKNFDKAGGREMIVLMNSR 62
Query: 59 GTGMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFI 118
+++ + D KL + S + +GL+ T
Sbjct: 63 VYSNSVNLQGINNRFDPSMEVTGKL-IKLNDSKGVDISAIFHCDGLILCTTTEST----- 116
Query: 119 NIDTLILWNPAIKRSFNV-PKPNYSGETIVGFGY---DSRTDDYKLVR----IVKQN-RC 169
L++WNP + P+ Y GY S YK++R V QN
Sbjct: 117 ---GLVVWNPCTGEIRCIKPRIFYRCNDRYALGYGNSKSSCHSYKILRSCCYYVDQNLSL 173
Query: 170 YRAQVELFSLNMGSWKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKILGF 229
A+ E++ + SW+ L DI + + S + G +W++ K++ F + F
Sbjct: 174 MAAEFEIYDFSTDSWRDLGDITRDM--IVYSSGVSLKGNTYWVSGSKEKGF----FMRYF 227
Query: 230 NMSDEEFNEITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDSTSSQNHLWV 285
+ S E F + LP AN + + G+ IAV Q + + S + +WV
Sbjct: 228 DFSKEVFGRLPLPYQSFNANH--TAALSAVGNEKIAVLQQKIL---AMSDEMRIWV 278
>AT1G46840.1 | Symbols: | F-box family protein |
chr1:17270185-17271706 FORWARD
Length = 475
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 128/301 (42%), Gaps = 41/301 (13%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHL-SSTKDPLSLLTVRG 59
+ +L +LV EIL +LS K++ C V K WNSL+ S F+ L SS P T R
Sbjct: 28 LEKLHIDLVIEILSRLSAKSIAICRCVSKQWNSLLVSQDFVESFLRSSLSRPRIWFTFR- 86
Query: 60 TGMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIG-----FFQIVGSVNGLVCLRVNS--V 112
D F+ + F L V +G + + SV+G + + NS +
Sbjct: 87 --FDGKWNFFSSPQPQKFGN--NLSVEATEHHMGSYENWYMKSCQSVHGFIFMSYNSKGM 142
Query: 113 TDQFFINIDTLILWNPAIKRSFNVPKPNYSGETIVG-FGYDSRTDDYKL--VRIVKQNRC 169
TD+ T ++WNP ++ +PK F YD +K+ + +V + +
Sbjct: 143 TDR------TQVIWNPCTRQLITLPKLEPENLDFNSFFAYDPTEKQFKVLCMTVVNKQQT 196
Query: 170 YRAQVELFSLNMGS--WKALTDIIPPLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKIL 227
+ ++ +L G W+ + + I NGVL+++ + K I+
Sbjct: 197 TSYKYQVLTLGTGPLLWRNIECPFMYRLRDKSNRGICINGVLYFIGWIKCSTM----III 252
Query: 228 GFNMSDEEFNEITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDSTSSQNHLWVMK 287
F++S E+F+ I + N + ++L ++G + V V G S + +WV+
Sbjct: 253 CFDVSSEKFSFIKI------ENAFIVTLINYRG--KLGVYLVVYG-----SPRGEVWVLD 299
Query: 288 D 288
D
Sbjct: 300 D 300
>AT4G13060.1 | Symbols: | F-box family protein-related |
chr4:7619935-7620942 REVERSE
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 94 FFQIVGSVNGLVCLRVNSVTDQFFINIDTLILWNPAIKRSFNVPKPNYSGETIVGFGYDS 153
++ SVNGLV R N+ +++WNP +K + +P S + GYD
Sbjct: 40 YYNYSASVNGLVTFRNNT----------EIVIWNPTMKEHITLLQPKISKPLKIYLGYDP 89
Query: 154 RTDDYKLVRIVKQNRCYRAQVELFSLNMG---SWKALTDIIPPLKSTDWDSPIFSNGVLH 210
+ + YKL+ + N + + L +G SW+ + + P K T I NGV++
Sbjct: 90 KENTYKLLSVANLNTLWDDYQKPHILTLGSQESWRVIKN-SPDHKPTSRYYCI--NGVVY 146
Query: 211 WLTY-EKDEHFNYYNK-----------------ILGFNMSDEEFNEITLPENLAYANPWC 252
+ Y +EH +N I+ F++ E+F I +P + C
Sbjct: 147 YNAYISSEEHRRGHNTVPAFTKEFELGVRVKHIIMSFDVRSEKFKSIQIPSSGHQYELMC 206
Query: 253 L-SLFAHKGSSSIAVSQFVVGEQDSTSSQNHLWVMKDYNVIGSWTIL 298
SL ++KG + WV + N+I W +L
Sbjct: 207 YKSLMSYKGKLA--------------------WVCCNSNIIKLWVLL 233
>AT3G16880.1 | Symbols: | F-box protein-related |
chr3:5766733-5767830 FORWARD
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 21/195 (10%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGT 60
M++LP +L+EEIL + + ++ CK WN+L + SF + L TK + +
Sbjct: 4 MSKLPNDLLEEILSRSPLYSMRAIRLTCKKWNTLAKEESFTKKQLVQTKAAKEFMVI--- 60
Query: 61 GMDPSIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQI--VGSVNGLVCLRVNSVTDQFFI 118
M +F L + E + + G I + V GLVC +T F
Sbjct: 61 -MMMDSKFCLMNINLNKEEDVEPSIKCNGKIINPIGMCRVYHCGGLVC-----ITKSFSN 114
Query: 119 NIDTLILWNPAIKRSFNVPKPNYSGETIVGFGYDSRTDDYKLVRIVKQNRCY------RA 172
D ++WNP + ++ + KP I GY+++ + +I+ Y R
Sbjct: 115 TRD--VVWNPYLGQTRWI-KPRSHHAYIYAIGYETKK-SCRSYKILSSEHNYINIDDERV 170
Query: 173 QVELFSLNMGSWKAL 187
E++ L+ SW+AL
Sbjct: 171 DYEIYELDSNSWRAL 185
>AT1G55070.1 | Symbols: | F-box family protein |
chr1:20551452-20552633 FORWARD
Length = 393
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 71/166 (42%), Gaps = 18/166 (10%)
Query: 3 ELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTK---DPLSLLTVRG 59
+P +LV +IL KLS K++ C VCK +S+IR P+ Y L K P + T G
Sbjct: 34 RIPADLVIKILSKLSAKSMAKCRCVCKLLSSIIRQPN--YNQLFPIKYPDPPRFIFTFLG 91
Query: 60 TGMDPSIEFYLHFDDEGFNEYKKLHVPFQGST---IGFFQIVGSVNGLVCLRVNSVTDQF 116
GM S Y E +E L T F QI+ SV+GLVC D
Sbjct: 92 GGMLFS---YTSTQPENPDENSSLVATAHHHTDIPRDFSQILSSVHGLVCYHRKIKNDTV 148
Query: 117 FINIDTLILWNPAIKRSFNVP-KPNYSGETIVGFGYDSRTDDYKLV 161
F +++NP + +P ++ GYD +K++
Sbjct: 149 F------VIYNPITGQYVTLPILEAHATINYFAIGYDPINKRFKVL 188
>AT3G52320.1 | Symbols: | F-box family protein |
chr3:19403020-19404192 REVERSE
Length = 390
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 105/265 (39%), Gaps = 51/265 (19%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGT 60
+ E+P E++ +IL++L K+L+ V K W SLI S F R +
Sbjct: 24 LPEIPEEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPS------------ 71
Query: 61 GMDPSIEFYLHFDDEGFNEYKKLH---------------VPFQGSTIGFFQ--IVGSVNG 103
PS F D E ++Y L V Q STI +V + G
Sbjct: 72 --SPSCLFAYLVDRENQSKYLLLQSSSSSRHDHSDTSVSVIDQHSTIPIMGGYLVNAARG 129
Query: 104 LVCLRVNSVTDQFFINIDTLILWNPAIKRSFNVPKPNYSGETIVGFGYDSRTDDYKLV-- 161
L+C R + + NP+ ++ +P FG+D D+YK++
Sbjct: 130 LLCYRTGR----------RVKVCNPSTRQIVELPIMRSKTNVWNWFGHDPFHDEYKVLSL 179
Query: 162 --RIVKQNRCYRAQVELFSLNMG-SWKALTDIIPPLKS-TDWDSPIFSNGVLHWLTYEKD 217
+ K+ R++ ++ L +G SW+ P + + + +GVL++
Sbjct: 180 FWEVTKEQTVVRSEHQVLVLGVGASWRNTKSHHTPHRPFHPYSRGMTIDGVLYYSARTDA 239
Query: 218 EHFNYYNKILGFNMSDEEFNEITLP 242
++ F++S EEFN I LP
Sbjct: 240 NRC----VLMSFDLSSEEFNLIELP 260
>AT2G04920.1 | Symbols: | F-box family protein (FBX9) |
chr2:1726138-1727268 FORWARD
Length = 376
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 40/310 (12%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGT 60
M++LP +LVE+IL ++ +L CK WNSL ++ F +H +L +
Sbjct: 1 MSDLPPDLVEDILSRVPATSLKRLRFTCKQWNSLFKNRRFTEKHFCKAPKQSHVLLWKDY 60
Query: 61 GMDP-SIEFYLHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFIN 119
+ P SI F L S + V +GL+ + + D
Sbjct: 61 TVCPMSINLNFSGSSIEFKSVLSLKDSHYNSEQVYIAKVFHCDGLL---LCTTKDH---- 113
Query: 120 IDTLILWNPAIKRSF-----NVPKPNYSGETIVGFGYDSRTDDYKLVRI----VKQNRCY 170
L++WNP + + N KP YS ++ G+ + YK++R + N
Sbjct: 114 --RLLVWNPCLGETRWINFENDYKP-YSRFSL-GYKNNKSCRSYKILRFWTSYLTPNH-I 168
Query: 171 RAQVELFSLNMGSWKALTDIIP-PLKSTDWDSPIFSNGVLHWLTYEKDEHFNYYNKILGF 229
+ ++ SW+ L D + + ++ + G +WL +++ +F +LGF
Sbjct: 169 GLRYNIYEFTTDSWRVLIDKVSLNYFLIESENGVSFKGNTYWLALDEETNF-----LLGF 223
Query: 230 NMSDEEFNEITLPENLAYANPWCLSLFAHKGSSSIAVSQFVVGEQDSTSSQNHLWVMKDY 289
+ + E F + LP +N C ++ S + + V Q+ SS+ +W+
Sbjct: 224 DFTMERFKRLCLP-----SNKNCDTMVL----SVVREEKLSVSHQNFCSSKMDIWMT--- 271
Query: 290 NVIGSWTILS 299
N I S T +S
Sbjct: 272 NRIDSETAMS 281
>AT4G10190.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G21130.1); Has
950 Blast hits to 926 proteins in 40 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 948;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr4:6350928-6352031 FORWARD
Length = 367
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 33/256 (12%)
Query: 1 MTELPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSST-KDPLSLLTVRG 59
+ +LP +LV EIL ++ TL+ K WN LI F +H ++ + L ++ +
Sbjct: 6 IVDLPEDLVMEILARVPTVTLVRLQSTSKRWNVLIEDKRFAEQHFTNAPRHSLLIMLMTF 65
Query: 60 TGMDPSIEFY-LHFDDEGFNEYKKLHVPFQGSTIGFFQIVGSVNGLVCLRVNSVTDQFFI 118
S++ + +H + +L P F + V N C D F +
Sbjct: 66 RVYLVSVDLHTIHNNKVNIISQLRLKDPLS----NFLEEVDICNVFHC-------DGFLL 114
Query: 119 --NIDT-LILWNPAIKRSFNV-PKPNYSGETIVGFGYDSRTDDYKLVRIVK--QNRCYRA 172
+D L++ NP + + + P+ Y I G S + YK++R+ + +R
Sbjct: 115 CTTVDNRLVVSNPCSRDTKWIQPRNFYKKFDIFALG-KSSCNKYKIMRMDQFYPDRPEFM 173
Query: 173 QVELFSLNMGSWKALTDIIPPLKSTDW------DSPIFSNGVLHWLTYEKDEHFNYYNKI 226
E++ N SW+ + I TDW D + NG +WL ++ + +
Sbjct: 174 NYEIYDFNSNSWRVVGKI------TDWFIPRCMDRGMSVNGNTYWLA-STNKDLTSSSFL 226
Query: 227 LGFNMSDEEFNEITLP 242
LGF+ S E F ++LP
Sbjct: 227 LGFDFSTERFVRVSLP 242
>AT3G23950.1 | Symbols: | F-box family protein |
chr3:8652908-8654164 REVERSE
Length = 418
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 98/238 (41%), Gaps = 43/238 (18%)
Query: 4 LPGELVEEILLKLSVKTLLCCTGVCKYWNSLIRSPSFIYRHLSSTKDPLSLLTVRGTGMD 63
+P EL E+L++L +K+L +CK W +I S F +S +S ++
Sbjct: 3 IPPELTFEVLVRLPLKSLARFRSMCKEWKLVIDSEFFRDCFMSHNSSSVSWSIIQTRPHK 62
Query: 64 PSIEFYLHFDDEGFNEYKKLHVP------FQGSTIGFFQIVGSVNGLVCLRVNSV--TDQ 115
++E H G + P F +TI Q++ +GLV L V S T
Sbjct: 63 LTLEIVGH---HGCKTWGLTRSPGSLVSFFAETTIRKLQVLACTDGLVLLYVESCVGTPM 119
Query: 116 FFINIDTLILWNPAIKRSFNVP-KPNYSGETIVGFGYDSRTDD--------------YKL 160
+++ NP + F +P +P Y+ + + R D YK+
Sbjct: 120 YYVG-------NPLFQEWFRIPLRPKYTSQNVEKLRNHERFSDSGLVTKMQSGIVVSYKV 172
Query: 161 VRIVKQNRCYRAQVE--LFSLNMGSWKALTDIIPPLKSTDWDS---PIFSNGVLHWLT 213
V ++ AQV+ ++S N G W+ + L S W S I NG+LHWL+
Sbjct: 173 VWLIAHT---FAQVDFAIYSSNTGEWEIKN--VTCLHSAYWFSHHKSIALNGILHWLS 225