Jatropha Genome Database
- JcCA0259301.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0259301.10 + phase: 0 /partial
(365 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06720.2 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA | IMPA-1 ... 635 0.0
AT3G06720.1 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1, ... 635 0.0
AT4G16143.2 | Symbols: IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2... 612 e-175
AT4G16143.1 | Symbols: IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2... 612 e-175
AT1G02690.1 | Symbols: IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM 6... 607 e-174
AT1G02690.2 | Symbols: IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM 6... 602 e-173
AT4G02150.1 | Symbols: MOS6, ATIMPALPHA3, IMPA-3 | MOS6 (MODIFIE... 600 e-172
AT1G09270.2 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4... 579 e-165
AT1G09270.1 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4... 579 e-165
AT1G09270.3 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4... 576 e-164
AT3G05720.1 | Symbols: IMPA-7 | IMPA-7 (IMPORTIN ALPHA ISOFORM 7... 478 e-135
AT5G49310.1 | Symbols: IMPA-5 | IMPA-5 (IMPORTIN ALPHA ISOFORM 5... 478 e-135
AT5G52000.1 | Symbols: IMPA-8 | IMPA-8 (IMPORTIN ALPHA ISOFORM 8... 360 e-100
AT1G32880.1 | Symbols: | importin alpha-1 subunit, putative | c... 157 1e-38
AT5G03070.1 | Symbols: IMPA-9 | IMPA-9 (IMPORTIN ALPHA ISOFORM 9... 144 7e-35
AT5G13060.1 | Symbols: ABAP1 | ABAP1 (ARMADILLO BTB ARABIDOPSIS ... 63 3e-10
AT5G19330.2 | Symbols: | armadillo/beta-catenin repeat family p... 56 3e-08
AT5G19330.1 | Symbols: | armadillo/beta-catenin repeat family p... 54 1e-07
AT3G46510.1 | Symbols: PUB13, ATPUB13 | PUB13 (PLANT U-BOX 13); ... 50 2e-06
>AT3G06720.2 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA | IMPA-1
(IMPORTIN ALPHA ISOFORM 1); binding / protein
transporter | chr3:2120559-2123555 FORWARD
Length = 532
Score = 635 bits (1638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/365 (83%), Positives = 334/365 (91%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
FEAAWALTNIASGTS++T+VVIDH AVPIFV+LL+SP+DDVREQAVWALGN+AGDSP+CR
Sbjct: 134 FEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSPRCR 193
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHS 120
DLVLG GAL+PLL Q NEHAKLSMLRNATWTLSNFCRGKPQP F+Q KPALPALERLIHS
Sbjct: 194 DLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQPHFDQVKPALPALERLIHS 253
Query: 121 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVT 180
+DEEVLTDACWALSYLSDGTNDKIQ VI+AGV P+LVELLLH SP+VLIPALRT+GNIVT
Sbjct: 254 DDEEVLTDACWALSYLSDGTNDKIQTVIQAGVVPKLVELLLHHSPSVLIPALRTVGNIVT 313
Query: 181 GDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP 240
GDD+QTQC+IN ALPCL NLLT N+KKSIKKEACWTISNITAGN + P
Sbjct: 314 GDDIQTQCVINSGALPCLANLLTQNHKKSIKKEACWTISNITAGNKDQIQTVVEANLISP 373
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCL 300
LV LLQ AEF+IKKEAAWAISNATSGGSH+QIK+LV QGCIKPLCDLL+CPDPRI+TVCL
Sbjct: 374 LVSLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVEQGCIKPLCDLLVCPDPRIITVCL 433
Query: 301 EGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILETY 360
EGLENILKVGEAEKNLG++G+ N YAQLIDDAEGLEKIENLQSHDN++IYEKAVKILETY
Sbjct: 434 EGLENILKVGEAEKNLGHTGDMNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETY 493
Query: 361 WLEED 365
WLEE+
Sbjct: 494 WLEEE 498
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 43/206 (20%)
Query: 144 IQAVIEAGVCPRLVELLLHPS-PTVLIPALRTIGNIVTGDDMQTQCIINHQALPCLLNLL 202
I+ VI AGV PR VE L P + A + NI +G T+ +I+H A+P + LL
Sbjct: 108 IEEVISAGVVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLL 167
Query: 203 THNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXPLV-QLLQIAEFEIKKEAAWAIS 261
+ ++++A W + N+ + PL+ QL + A+ + + A W +S
Sbjct: 168 A-SPSDDVREQAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLS 226
Query: 262 NATSG----------------------------------------GSHEQIKFLVSQGCI 281
N G G++++I+ ++ G +
Sbjct: 227 NFCRGKPQPHFDQVKPALPALERLIHSDDEEVLTDACWALSYLSDGTNDKIQTVIQAGVV 286
Query: 282 KPLCDLLICPDPRIVTVCLEGLENIL 307
L +LL+ P ++ L + NI+
Sbjct: 287 PKLVELLLHHSPSVLIPALRTVGNIV 312
>AT3G06720.1 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1,
IMPA1 | IMPA-1 (IMPORTIN ALPHA ISOFORM 1); binding /
protein transporter | chr3:2120559-2123555 FORWARD
Length = 532
Score = 635 bits (1638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/365 (83%), Positives = 334/365 (91%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
FEAAWALTNIASGTS++T+VVIDH AVPIFV+LL+SP+DDVREQAVWALGN+AGDSP+CR
Sbjct: 134 FEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSPRCR 193
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHS 120
DLVLG GAL+PLL Q NEHAKLSMLRNATWTLSNFCRGKPQP F+Q KPALPALERLIHS
Sbjct: 194 DLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQPHFDQVKPALPALERLIHS 253
Query: 121 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVT 180
+DEEVLTDACWALSYLSDGTNDKIQ VI+AGV P+LVELLLH SP+VLIPALRT+GNIVT
Sbjct: 254 DDEEVLTDACWALSYLSDGTNDKIQTVIQAGVVPKLVELLLHHSPSVLIPALRTVGNIVT 313
Query: 181 GDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP 240
GDD+QTQC+IN ALPCL NLLT N+KKSIKKEACWTISNITAGN + P
Sbjct: 314 GDDIQTQCVINSGALPCLANLLTQNHKKSIKKEACWTISNITAGNKDQIQTVVEANLISP 373
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCL 300
LV LLQ AEF+IKKEAAWAISNATSGGSH+QIK+LV QGCIKPLCDLL+CPDPRI+TVCL
Sbjct: 374 LVSLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVEQGCIKPLCDLLVCPDPRIITVCL 433
Query: 301 EGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILETY 360
EGLENILKVGEAEKNLG++G+ N YAQLIDDAEGLEKIENLQSHDN++IYEKAVKILETY
Sbjct: 434 EGLENILKVGEAEKNLGHTGDMNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETY 493
Query: 361 WLEED 365
WLEE+
Sbjct: 494 WLEEE 498
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 43/206 (20%)
Query: 144 IQAVIEAGVCPRLVELLLHPS-PTVLIPALRTIGNIVTGDDMQTQCIINHQALPCLLNLL 202
I+ VI AGV PR VE L P + A + NI +G T+ +I+H A+P + LL
Sbjct: 108 IEEVISAGVVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLL 167
Query: 203 THNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXPLV-QLLQIAEFEIKKEAAWAIS 261
+ ++++A W + N+ + PL+ QL + A+ + + A W +S
Sbjct: 168 A-SPSDDVREQAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLS 226
Query: 262 NATSG----------------------------------------GSHEQIKFLVSQGCI 281
N G G++++I+ ++ G +
Sbjct: 227 NFCRGKPQPHFDQVKPALPALERLIHSDDEEVLTDACWALSYLSDGTNDKIQTVIQAGVV 286
Query: 282 KPLCDLLICPDPRIVTVCLEGLENIL 307
L +LL+ P ++ L + NI+
Sbjct: 287 PKLVELLLHHSPSVLIPALRTVGNIV 312
>AT4G16143.2 | Symbols: IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2);
binding / protein transporter | chr4:9134450-9137134
REVERSE
Length = 535
Score = 612 bits (1578), Expect = e-175, Method: Compositional matrix adjust.
Identities = 299/365 (81%), Positives = 330/365 (90%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
FEAAWALTNIASGTSENT+VVI+HGAVPIFV+LL+S +DDVREQAVWALGN+AGDSP+CR
Sbjct: 139 FEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVWALGNVAGDSPRCR 198
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHS 120
DLVLG GAL+PLL+Q NEHAKLSMLRNATWTLSNFCRGKPQP F+Q +PALPALERLIHS
Sbjct: 199 DLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVRPALPALERLIHS 258
Query: 121 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVT 180
DEEVLTDACWALSYLSDGTNDKIQ+VIEAGV PRLVELL H SP+VLIPALR+IGNIVT
Sbjct: 259 TDEEVLTDACWALSYLSDGTNDKIQSVIEAGVVPRLVELLQHQSPSVLIPALRSIGNIVT 318
Query: 181 GDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP 240
GDD+QTQC+I+H AL LL+LLTHN+KKSIKKEACWTISNITAGN + P
Sbjct: 319 GDDLQTQCVISHGALLSLLSLLTHNHKKSIKKEACWTISNITAGNRDQIQAVCEAGLICP 378
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCL 300
LV LLQ AEF+IKKEAAWAISNATSGGS +QIK++V QG +KPLCDLL+CPDPRI+TVCL
Sbjct: 379 LVNLLQNAEFDIKKEAAWAISNATSGGSPDQIKYMVEQGVVKPLCDLLVCPDPRIITVCL 438
Query: 301 EGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILETY 360
EGLENILKVGEAEK GN+G+ N YAQLIDDAEGLEKIENLQSHDN +IYEKAVKILETY
Sbjct: 439 EGLENILKVGEAEKVTGNTGDVNFYAQLIDDAEGLEKIENLQSHDNSEIYEKAVKILETY 498
Query: 361 WLEED 365
WLEE+
Sbjct: 499 WLEEE 503
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 2/194 (1%)
Query: 114 LERLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALR 173
+E L + ++ +A WAL+ ++ GT++ + VIE G P V+LL S V A+
Sbjct: 126 VEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVW 185
Query: 174 TIGNIVTGDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXX 233
+GN+ ++ AL LL+ L + K S+ + A WT+SN G
Sbjct: 186 ALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQV 245
Query: 234 XXXXXXPLVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDP 293
L +L+ + E+ +A WA+S S G++++I+ ++ G + L +LL P
Sbjct: 246 RPALPA-LERLIHSTDEEVLTDACWALS-YLSDGTNDKIQSVIEAGVVPRLVELLQHQSP 303
Query: 294 RIVTVCLEGLENIL 307
++ L + NI+
Sbjct: 304 SVLIPALRSIGNIV 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 105 EQTKPALPALERLIHSNDEEVLTDACWAL-SYLSDGTNDKIQAVIEAGVCPRLVELLLHP 163
E+ +LPA+ + S+D + +A LS + I+ VI+AGV PR VE L
Sbjct: 73 EKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAGVVPRFVEFLTRE 132
Query: 164 S-PTVLIPALRTIGNIVTGDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNIT 222
P + A + NI +G T+ +I H A+P + LL + ++++A W + N+
Sbjct: 133 DYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLA-SQSDDVREQAVWALGNVA 191
Query: 223 AGNVNXXXXXXXXXXXXPLV-QLLQIAEFEIKKEAAWAISNATSG 266
+ PL+ QL + A+ + + A W +SN G
Sbjct: 192 GDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRG 236
>AT4G16143.1 | Symbols: IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2);
binding / protein transporter | chr4:9134450-9137134
REVERSE
Length = 535
Score = 612 bits (1578), Expect = e-175, Method: Compositional matrix adjust.
Identities = 299/365 (81%), Positives = 330/365 (90%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
FEAAWALTNIASGTSENT+VVI+HGAVPIFV+LL+S +DDVREQAVWALGN+AGDSP+CR
Sbjct: 139 FEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVWALGNVAGDSPRCR 198
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHS 120
DLVLG GAL+PLL+Q NEHAKLSMLRNATWTLSNFCRGKPQP F+Q +PALPALERLIHS
Sbjct: 199 DLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVRPALPALERLIHS 258
Query: 121 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVT 180
DEEVLTDACWALSYLSDGTNDKIQ+VIEAGV PRLVELL H SP+VLIPALR+IGNIVT
Sbjct: 259 TDEEVLTDACWALSYLSDGTNDKIQSVIEAGVVPRLVELLQHQSPSVLIPALRSIGNIVT 318
Query: 181 GDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP 240
GDD+QTQC+I+H AL LL+LLTHN+KKSIKKEACWTISNITAGN + P
Sbjct: 319 GDDLQTQCVISHGALLSLLSLLTHNHKKSIKKEACWTISNITAGNRDQIQAVCEAGLICP 378
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCL 300
LV LLQ AEF+IKKEAAWAISNATSGGS +QIK++V QG +KPLCDLL+CPDPRI+TVCL
Sbjct: 379 LVNLLQNAEFDIKKEAAWAISNATSGGSPDQIKYMVEQGVVKPLCDLLVCPDPRIITVCL 438
Query: 301 EGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILETY 360
EGLENILKVGEAEK GN+G+ N YAQLIDDAEGLEKIENLQSHDN +IYEKAVKILETY
Sbjct: 439 EGLENILKVGEAEKVTGNTGDVNFYAQLIDDAEGLEKIENLQSHDNSEIYEKAVKILETY 498
Query: 361 WLEED 365
WLEE+
Sbjct: 499 WLEEE 503
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 2/194 (1%)
Query: 114 LERLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALR 173
+E L + ++ +A WAL+ ++ GT++ + VIE G P V+LL S V A+
Sbjct: 126 VEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVW 185
Query: 174 TIGNIVTGDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXX 233
+GN+ ++ AL LL+ L + K S+ + A WT+SN G
Sbjct: 186 ALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQV 245
Query: 234 XXXXXXPLVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDP 293
L +L+ + E+ +A WA+S S G++++I+ ++ G + L +LL P
Sbjct: 246 RPALPA-LERLIHSTDEEVLTDACWALS-YLSDGTNDKIQSVIEAGVVPRLVELLQHQSP 303
Query: 294 RIVTVCLEGLENIL 307
++ L + NI+
Sbjct: 304 SVLIPALRSIGNIV 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 105 EQTKPALPALERLIHSNDEEVLTDACWAL-SYLSDGTNDKIQAVIEAGVCPRLVELLLHP 163
E+ +LPA+ + S+D + +A LS + I+ VI+AGV PR VE L
Sbjct: 73 EKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAGVVPRFVEFLTRE 132
Query: 164 S-PTVLIPALRTIGNIVTGDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNIT 222
P + A + NI +G T+ +I H A+P + LL + ++++A W + N+
Sbjct: 133 DYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLA-SQSDDVREQAVWALGNVA 191
Query: 223 AGNVNXXXXXXXXXXXXPLV-QLLQIAEFEIKKEAAWAISNATSG 266
+ PL+ QL + A+ + + A W +SN G
Sbjct: 192 GDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRG 236
>AT1G02690.1 | Symbols: IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM 6);
binding / protein transporter | chr1:584397-587036
FORWARD
Length = 538
Score = 607 bits (1564), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/365 (79%), Positives = 324/365 (88%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
FEAAWALTNIASGTSENTRV+ID GAVP+FVKLLSS +++VREQAVWALGN+AGDSPKCR
Sbjct: 138 FEAAWALTNIASGTSENTRVIIDSGAVPLFVKLLSSASEEVREQAVWALGNVAGDSPKCR 197
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHS 120
D VL A+M LLAQF+EH+KLSMLRNATWTLSNFCRGKPQP FEQTK ALPALERL+HS
Sbjct: 198 DHVLSCEAMMSLLAQFHEHSKLSMLRNATWTLSNFCRGKPQPAFEQTKAALPALERLLHS 257
Query: 121 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVT 180
DEEVLTDA WALSYLSDGTN+KIQ VI+AGV PRLV+LL HPSP+VLIPALRTIGNIVT
Sbjct: 258 TDEEVLTDASWALSYLSDGTNEKIQTVIDAGVIPRLVQLLAHPSPSVLIPALRTIGNIVT 317
Query: 181 GDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP 240
GDD+QTQ +I+ QALP LLNLL + YKKSIKKEACWTISNITAGN + P
Sbjct: 318 GDDIQTQAVISSQALPGLLNLLKNTYKKSIKKEACWTISNITAGNTSQIQEVFQAGIIRP 377
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCL 300
L+ LL+I EFEIKKEA WAISNATSGG+H+QIKFLVSQGCI+PLCDLL CPDPR+VTV L
Sbjct: 378 LINLLEIGEFEIKKEAVWAISNATSGGNHDQIKFLVSQGCIRPLCDLLPCPDPRVVTVTL 437
Query: 301 EGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILETY 360
EGLENILKVGEAEKNLGN+G NLYAQ+I+DA+GL+KIENLQSHDN++IYEKAVKILE+Y
Sbjct: 438 EGLENILKVGEAEKNLGNTGNDNLYAQMIEDADGLDKIENLQSHDNNEIYEKAVKILESY 497
Query: 361 WLEED 365
W +D
Sbjct: 498 WAADD 502
>AT1G02690.2 | Symbols: IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM 6);
binding / protein transporter | chr1:584397-587036
FORWARD
Length = 539
Score = 602 bits (1553), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/366 (79%), Positives = 324/366 (88%), Gaps = 1/366 (0%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
FEAAWALTNIASGTSENTRV+ID GAVP+FVKLLSS +++VREQAVWALGN+AGDSPKCR
Sbjct: 138 FEAAWALTNIASGTSENTRVIIDSGAVPLFVKLLSSASEEVREQAVWALGNVAGDSPKCR 197
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQ-TKPALPALERLIH 119
D VL A+M LLAQF+EH+KLSMLRNATWTLSNFCRGKPQP FEQ TK ALPALERL+H
Sbjct: 198 DHVLSCEAMMSLLAQFHEHSKLSMLRNATWTLSNFCRGKPQPAFEQQTKAALPALERLLH 257
Query: 120 SNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIV 179
S DEEVLTDA WALSYLSDGTN+KIQ VI+AGV PRLV+LL HPSP+VLIPALRTIGNIV
Sbjct: 258 STDEEVLTDASWALSYLSDGTNEKIQTVIDAGVIPRLVQLLAHPSPSVLIPALRTIGNIV 317
Query: 180 TGDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXX 239
TGDD+QTQ +I+ QALP LLNLL + YKKSIKKEACWTISNITAGN +
Sbjct: 318 TGDDIQTQAVISSQALPGLLNLLKNTYKKSIKKEACWTISNITAGNTSQIQEVFQAGIIR 377
Query: 240 PLVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVC 299
PL+ LL+I EFEIKKEA WAISNATSGG+H+QIKFLVSQGCI+PLCDLL CPDPR+VTV
Sbjct: 378 PLINLLEIGEFEIKKEAVWAISNATSGGNHDQIKFLVSQGCIRPLCDLLPCPDPRVVTVT 437
Query: 300 LEGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILET 359
LEGLENILKVGEAEKNLGN+G NLYAQ+I+DA+GL+KIENLQSHDN++IYEKAVKILE+
Sbjct: 438 LEGLENILKVGEAEKNLGNTGNDNLYAQMIEDADGLDKIENLQSHDNNEIYEKAVKILES 497
Query: 360 YWLEED 365
YW +D
Sbjct: 498 YWAADD 503
>AT4G02150.1 | Symbols: MOS6, ATIMPALPHA3, IMPA-3 | MOS6 (MODIFIER
OF SNC1, 6); binding / protein transporter |
chr4:950884-953602 REVERSE
Length = 531
Score = 600 bits (1547), Expect = e-172, Method: Compositional matrix adjust.
Identities = 284/361 (78%), Positives = 321/361 (88%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
FEAAWALTNIASGTSENT V+I+ GAVPIF++LLSS ++DVREQAVWALGN+AGDSPKCR
Sbjct: 137 FEAAWALTNIASGTSENTNVIIESGAVPIFIQLLSSASEDVREQAVWALGNVAGDSPKCR 196
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHS 120
DLVL +GA+ PLL+QFNE+ KLSMLRNATWTLSNFCRGKP P FEQT+PALP LERL+ S
Sbjct: 197 DLVLSYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRGKPPPAFEQTQPALPVLERLVQS 256
Query: 121 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVT 180
DEEVLTDACWALSYLSD +NDKIQAVIEAGV PRL++LL H SP+VLIPALRTIGNIVT
Sbjct: 257 MDEEVLTDACWALSYLSDNSNDKIQAVIEAGVVPRLIQLLGHSSPSVLIPALRTIGNIVT 316
Query: 181 GDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP 240
GDD+QTQ +++ QALPCLLNLL +NYKKSIKKEACWTISNITAGN +
Sbjct: 317 GDDLQTQMVLDQQALPCLLNLLKNNYKKSIKKEACWTISNITAGNADQIQAVIDAGIIQS 376
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCL 300
LV +LQ AEFE+KKEAAW ISNATSGG+H+QIKF+VSQGCIKPLCDLL CPD ++VTVCL
Sbjct: 377 LVWVLQSAEFEVKKEAAWGISNATSGGTHDQIKFMVSQGCIKPLCDLLTCPDLKVVTVCL 436
Query: 301 EGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILETY 360
E LENIL VGEAEKNLG++GE NLYAQ+ID+AEGLEKIENLQSHDN+DIY+KAVKILET+
Sbjct: 437 EALENILVVGEAEKNLGHTGEDNLYAQMIDEAEGLEKIENLQSHDNNDIYDKAVKILETF 496
Query: 361 W 361
W
Sbjct: 497 W 497
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 4/164 (2%)
Query: 106 QTKPALPALERLIHSNDEEVLTDACWAL-SYLSDGTNDKIQAVIEAGVCPRLVELLLHPS 164
Q K LPA+ I S D +A L LS N I V+++GV PR+V+ L
Sbjct: 72 QLKDNLPAMVAGIWSEDSNSQLEATNLLRKLLSIEQNPPINEVVQSGVVPRVVKFLSRDD 131
Query: 165 -PTVLIPALRTIGNIVTGDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITA 223
P + A + NI +G T II A+P + LL+ + + ++++A W + N+
Sbjct: 132 FPKLQFEAAWALTNIASGTSENTNVIIESGAVPIFIQLLS-SASEDVREQAVWALGNVAG 190
Query: 224 GNVNXXXXXXXXXXXXPLV-QLLQIAEFEIKKEAAWAISNATSG 266
+ PL+ Q + + + + A W +SN G
Sbjct: 191 DSPKCRDLVLSYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRG 234
>AT1G09270.2 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4);
binding / protein transporter | chr1:2994506-2997833
FORWARD
Length = 538
Score = 579 bits (1492), Expect = e-165, Method: Compositional matrix adjust.
Identities = 283/361 (78%), Positives = 314/361 (86%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
FEAAWALTN+ASGTS++TRVVI+ GAVPIFVKLL+S +DDVREQAVWALGN+AGDSP CR
Sbjct: 141 FEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCR 200
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHS 120
+LVL +GAL PLLAQ NE++KLSMLRNATWTLSNFCRGKP FEQ KPALP L +LI+
Sbjct: 201 NLVLNYGALEPLLAQLNENSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYL 260
Query: 121 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVT 180
NDEEVLTDACWALSYLSDG NDKIQAVIEAGVCPRLVELL H SPTVLIPALRT+GNIVT
Sbjct: 261 NDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVT 320
Query: 181 GDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP 240
GDD QTQ II LP L NLLT N+KKSIKKEACWTISNITAGN P
Sbjct: 321 GDDSQTQFIIESGVLPHLYNLLTQNHKKSIKKEACWTISNITAGNKLQIEAVVGAGIILP 380
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCL 300
LV LLQ AEF+IKKEAAWAISNATSGGSHEQI++LV+QGCIKPLCDLLICPDPRIVTVCL
Sbjct: 381 LVHLLQNAEFDIKKEAAWAISNATSGGSHEQIQYLVTQGCIKPLCDLLICPDPRIVTVCL 440
Query: 301 EGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILETY 360
EGLENILKVGEA+K +G + NLYAQ+I++++GL+K+ENLQSHDN++IYEKAVKILE Y
Sbjct: 441 EGLENILKVGEADKEMGLNSGVNLYAQIIEESDGLDKVENLQSHDNNEIYEKAVKILERY 500
Query: 361 W 361
W
Sbjct: 501 W 501
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 105 EQTKPALPALERLIHSNDEEVLTDACWAL-SYLSDGTNDKIQAVIEAGVCPRLVELL-LH 162
E+ +P + + ++S+D + +A LS + I VI+AGV PR VE L H
Sbjct: 75 EKRLEGIPMMVQGVYSDDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVIPRFVEFLGRH 134
Query: 163 PSPTVLIPALRTIGNIVTGDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNIT 222
P + A + N+ +G T+ +I A+P + LLT + ++++A W + N+
Sbjct: 135 DHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLT-SASDDVREQAVWALGNVA 193
Query: 223 AGNVNXXXXXXXXXXXXPLV-QLLQIAEFEIKKEAAWAISNATSGG---SHEQIK 273
+ N PL+ QL + ++ + + A W +SN G EQ+K
Sbjct: 194 GDSPNCRNLVLNYGALEPLLAQLNENSKLSMLRNATWTLSNFCRGKPPTPFEQVK 248
>AT1G09270.1 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4);
binding / protein transporter | chr1:2994506-2997833
FORWARD
Length = 538
Score = 579 bits (1492), Expect = e-165, Method: Compositional matrix adjust.
Identities = 283/361 (78%), Positives = 314/361 (86%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
FEAAWALTN+ASGTS++TRVVI+ GAVPIFVKLL+S +DDVREQAVWALGN+AGDSP CR
Sbjct: 141 FEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCR 200
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHS 120
+LVL +GAL PLLAQ NE++KLSMLRNATWTLSNFCRGKP FEQ KPALP L +LI+
Sbjct: 201 NLVLNYGALEPLLAQLNENSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYL 260
Query: 121 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVT 180
NDEEVLTDACWALSYLSDG NDKIQAVIEAGVCPRLVELL H SPTVLIPALRT+GNIVT
Sbjct: 261 NDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVT 320
Query: 181 GDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP 240
GDD QTQ II LP L NLLT N+KKSIKKEACWTISNITAGN P
Sbjct: 321 GDDSQTQFIIESGVLPHLYNLLTQNHKKSIKKEACWTISNITAGNKLQIEAVVGAGIILP 380
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCL 300
LV LLQ AEF+IKKEAAWAISNATSGGSHEQI++LV+QGCIKPLCDLLICPDPRIVTVCL
Sbjct: 381 LVHLLQNAEFDIKKEAAWAISNATSGGSHEQIQYLVTQGCIKPLCDLLICPDPRIVTVCL 440
Query: 301 EGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILETY 360
EGLENILKVGEA+K +G + NLYAQ+I++++GL+K+ENLQSHDN++IYEKAVKILE Y
Sbjct: 441 EGLENILKVGEADKEMGLNSGVNLYAQIIEESDGLDKVENLQSHDNNEIYEKAVKILERY 500
Query: 361 W 361
W
Sbjct: 501 W 501
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 105 EQTKPALPALERLIHSNDEEVLTDACWAL-SYLSDGTNDKIQAVIEAGVCPRLVELL-LH 162
E+ +P + + ++S+D + +A LS + I VI+AGV PR VE L H
Sbjct: 75 EKRLEGIPMMVQGVYSDDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVIPRFVEFLGRH 134
Query: 163 PSPTVLIPALRTIGNIVTGDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNIT 222
P + A + N+ +G T+ +I A+P + LLT + ++++A W + N+
Sbjct: 135 DHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLT-SASDDVREQAVWALGNVA 193
Query: 223 AGNVNXXXXXXXXXXXXPLV-QLLQIAEFEIKKEAAWAISNATSGG---SHEQIK 273
+ N PL+ QL + ++ + + A W +SN G EQ+K
Sbjct: 194 GDSPNCRNLVLNYGALEPLLAQLNENSKLSMLRNATWTLSNFCRGKPPTPFEQVK 248
>AT1G09270.3 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4);
binding / protein transporter | chr1:2995162-2997833
FORWARD
Length = 456
Score = 576 bits (1484), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/361 (78%), Positives = 314/361 (86%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
FEAAWALTN+ASGTS++TRVVI+ GAVPIFVKLL+S +DDVREQAVWALGN+AGDSP CR
Sbjct: 59 FEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCR 118
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHS 120
+LVL +GAL PLLAQ NE++KLSMLRNATWTLSNFCRGKP FEQ KPALP L +LI+
Sbjct: 119 NLVLNYGALEPLLAQLNENSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYL 178
Query: 121 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVT 180
NDEEVLTDACWALSYLSDG NDKIQAVIEAGVCPRLVELL H SPTVLIPALRT+GNIVT
Sbjct: 179 NDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVT 238
Query: 181 GDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP 240
GDD QTQ II LP L NLLT N+KKSIKKEACWTISNITAGN P
Sbjct: 239 GDDSQTQFIIESGVLPHLYNLLTQNHKKSIKKEACWTISNITAGNKLQIEAVVGAGIILP 298
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCL 300
LV LLQ AEF+IKKEAAWAISNATSGGSHEQI++LV+QGCIKPLCDLLICPDPRIVTVCL
Sbjct: 299 LVHLLQNAEFDIKKEAAWAISNATSGGSHEQIQYLVTQGCIKPLCDLLICPDPRIVTVCL 358
Query: 301 EGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILETY 360
EGLENILKVGEA+K +G + NLYAQ+I++++GL+K+ENLQSHDN++IYEKAVKILE Y
Sbjct: 359 EGLENILKVGEADKEMGLNSGVNLYAQIIEESDGLDKVENLQSHDNNEIYEKAVKILERY 418
Query: 361 W 361
W
Sbjct: 419 W 419
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Query: 118 IHSNDEEVLTDACWAL-SYLSDGTNDKIQAVIEAGVCPRLVELL-LHPSPTVLIPALRTI 175
++S+D + +A LS + I VI+AGV PR VE L H P + A +
Sbjct: 6 VYSDDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWAL 65
Query: 176 GNIVTGDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXX 235
N+ +G T+ +I A+P + LLT + ++++A W + N+ + N
Sbjct: 66 TNVASGTSDHTRVVIEQGAVPIFVKLLT-SASDDVREQAVWALGNVAGDSPNCRNLVLNY 124
Query: 236 XXXXPLV-QLLQIAEFEIKKEAAWAISNATSGG---SHEQIK 273
PL+ QL + ++ + + A W +SN G EQ+K
Sbjct: 125 GALEPLLAQLNENSKLSMLRNATWTLSNFCRGKPPTPFEQVK 166
>AT3G05720.1 | Symbols: IMPA-7 | IMPA-7 (IMPORTIN ALPHA ISOFORM 7);
binding / protein transporter | chr3:1687992-1691736
REVERSE
Length = 528
Score = 478 bits (1230), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/369 (65%), Positives = 285/369 (77%), Gaps = 7/369 (1%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
FEAAWALTNIASGTSENT VVIDHGAV I V+LL+SP D VREQ VWALGNI+GDSP+CR
Sbjct: 122 FEAAWALTNIASGTSENTEVVIDHGAVAILVRLLNSPYDVVREQVVWALGNISGDSPRCR 181
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHS 120
D+VLGH AL LL Q N AKLSML NA WTLSN CRGKPQP F+Q ALPAL +LI
Sbjct: 182 DIVLGHAALPSLLLQLNHGAKLSMLVNAAWTLSNLCRGKPQPPFDQVSAALPALAQLIRL 241
Query: 121 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVT 180
+D+E+L CWAL YLSDG+N+KIQAVIEA VC RL+ L +H SP+V+ PALRTIGNIVT
Sbjct: 242 DDKELLAYTCWALVYLSDGSNEKIQAVIEANVCARLIGLSIHRSPSVITPALRTIGNIVT 301
Query: 181 GDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP 240
G+D QTQ II+ QALPCL+NLL +Y K+I+KEACWT+SNITAG +
Sbjct: 302 GNDSQTQHIIDLQALPCLVNLLRGSYNKTIRKEACWTVSNITAGCQSQIQAVFDADICPA 361
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCL 300
LV LLQ +E ++KKEAAWAI NA +GGS++QI FLV Q CIKPLCDLL C D ++V VCL
Sbjct: 362 LVNLLQNSEGDVKKEAAWAICNAIAGGSYKQIMFLVKQECIKPLCDLLTCSDTQLVMVCL 421
Query: 301 EGLENILKVGEAEKNLGNSG-----ETNL--YAQLIDDAEGLEKIENLQSHDNHDIYEKA 353
E L+ ILKVGE + G +TN+ +AQLI++AEGLEKIE LQSH+N+DIYE A
Sbjct: 422 EALKKILKVGEVFSSRHAEGIYQCPQTNVNPHAQLIEEAEGLEKIEGLQSHENNDIYETA 481
Query: 354 VKILETYWL 362
VKILETYW+
Sbjct: 482 VKILETYWM 490
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 16/229 (6%)
Query: 114 LERLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALR 173
+E L + ++ +A WAL+ ++ GT++ + VI+ G LV LL P V +
Sbjct: 109 VEFLTWDDSPQLQFEAAWALTNIASGTSENTEVVIDHGAVAILVRLLNSPYDVVREQVVW 168
Query: 174 TIGNIVTGDDMQTQCII-NHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXX 232
+GNI +GD + + I+ H ALP LL L H K S+ A WT+SN+ G
Sbjct: 169 ALGNI-SGDSPRCRDIVLGHAALPSLLLQLNHGAKLSMLVNAAWTLSNLCRGKPQPPFDQ 227
Query: 233 XXXXXXXPLVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPD 292
L QL+++ + E+ WA+ S GS+E+I+ ++ L L I
Sbjct: 228 VSAALPA-LAQLIRLDDKELLAYTCWALV-YLSDGSNEKIQAVIEANVCARLIGLSIHRS 285
Query: 293 PRIVTVCLEGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENL 341
P ++T L + NI+ GN +T Q I D + L + NL
Sbjct: 286 PSVITPALRTIGNIVT--------GNDSQT----QHIIDLQALPCLVNL 322
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 17/183 (9%)
Query: 99 KPQPLFEQTKPALP----------ALERLIHSNDEEVLTDACWALSYLSDGT--NDKIQA 146
+ + L ++ + ALP L I S++ ++L +A + L G N +++
Sbjct: 39 REESLLKKRREALPHSPSADSLDQKLISCIWSDERDLLIEATTQIRTLLCGEMFNVRVEE 98
Query: 147 VIEAGVCPRLVELLL-HPSPTVLIPALRTIGNIVTGDDMQTQCIINHQALPCLLNLLTHN 205
VI+AG+ PR VE L SP + A + NI +G T+ +I+H A+ L+ LL
Sbjct: 99 VIQAGLVPRFVEFLTWDDSPQLQFEAAWALTNIASGTSENTEVVIDHGAVAILVRLLNSP 158
Query: 206 YKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP--LVQLLQIAEFEIKKEAAWAISNA 263
Y ++++ W + NI+ G+ P L+QL A+ + AAW +SN
Sbjct: 159 Y-DVVREQVVWALGNIS-GDSPRCRDIVLGHAALPSLLLQLNHGAKLSMLVNAAWTLSNL 216
Query: 264 TSG 266
G
Sbjct: 217 CRG 219
>AT5G49310.1 | Symbols: IMPA-5 | IMPA-5 (IMPORTIN ALPHA ISOFORM 5);
binding / protein transporter | chr5:19992016-19994516
REVERSE
Length = 519
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/366 (65%), Positives = 281/366 (76%), Gaps = 4/366 (1%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
FEAAWALTNIASG SE+T+VVIDHG VP+FV+LL+SP DDVREQA+W LGN+AGDS +CR
Sbjct: 132 FEAAWALTNIASGASEHTKVVIDHGVVPLFVQLLASPDDDVREQAIWGLGNVAGDSIQCR 191
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHS 120
D VL GA +PLL Q N HA LS+LRNATWTLSNF RGKP P F+ K LP L+RL++S
Sbjct: 192 DFVLNSGAFIPLLHQLNNHATLSILRNATWTLSNFFRGKPSPPFDLVKHVLPVLKRLVYS 251
Query: 121 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVT 180
+DE+VL DACWALS LSD +N+ IQ+VIEAGV PRLVELL H SP VL+PALR IGNIV+
Sbjct: 252 DDEQVLIDACWALSNLSDASNENIQSVIEAGVVPRLVELLQHASPVVLVPALRCIGNIVS 311
Query: 181 GDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP 240
G+ QT C+IN LP L +LLT N+ + I++EACWTISNITAG
Sbjct: 312 GNSQQTHCVINCGVLPVLADLLTQNHMRGIRREACWTISNITAGLEEQIQSVIDANLIPS 371
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCL 300
LV L Q AEF+IKKEA WAISNA+ GGS QIK+LV Q CIK LCD+L+CPD RI+ V L
Sbjct: 372 LVNLAQHAEFDIKKEAIWAISNASVGGSPNQIKYLVEQNCIKALCDILVCPDLRIILVSL 431
Query: 301 EGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILETY 360
GLE IL GE +KNL + N Y+Q+I+DAEGLEKIENLQ H N++IYEKAVKIL+TY
Sbjct: 432 GGLEMILIAGEVDKNL---RDVNCYSQMIEDAEGLEKIENLQHHGNNEIYEKAVKILQTY 488
Query: 361 WL-EED 365
L EED
Sbjct: 489 GLVEED 494
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 106/212 (50%), Gaps = 14/212 (6%)
Query: 114 LERLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALR 173
+E L ++ ++ +A WAL+ ++ G ++ + VI+ GV P V+LL P V A+
Sbjct: 119 VEFLKKDDNPKLQFEAAWALTNIASGASEHTKVVIDHGVVPLFVQLLASPDDDVREQAIW 178
Query: 174 TIGNIVTGDDMQTQ-CIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXX 232
+GN V GD +Q + ++N A LL+ L ++ SI + A WT+SN G
Sbjct: 179 GLGN-VAGDSIQCRDFVLNSGAFIPLLHQLNNHATLSILRNATWTLSNFFRG--KPSPPF 235
Query: 233 XXXXXXXPLVQLLQIAEFE-IKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICP 291
P+++ L ++ E + +A WA+SN S S+E I+ ++ G + L +LL
Sbjct: 236 DLVKHVLPVLKRLVYSDDEQVLIDACWALSN-LSDASNENIQSVIEAGVVPRLVELLQHA 294
Query: 292 DPRIVTVCLEGLENILKVGEAEKNLGNSGETN 323
P ++ L + NI+ GNS +T+
Sbjct: 295 SPVVLVPALRCIGNIVS--------GNSQQTH 318
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 147 VIEAGVCPRLVELLLH-PSPTVLIPALRTIGNIVTGDDMQTQCIINHQALPCLLNLLTHN 205
VI++GV PR VE L +P + A + NI +G T+ +I+H +P + LL +
Sbjct: 109 VIKSGVVPRFVEFLKKDDNPKLQFEAAWALTNIASGASEHTKVVIDHGVVPLFVQLLA-S 167
Query: 206 YKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXPLV-QLLQIAEFEIKKEAAWAISNAT 264
++++A W + N+ ++ PL+ QL A I + A W +SN
Sbjct: 168 PDDDVREQAIWGLGNVAGDSIQCRDFVLNSGAFIPLLHQLNNHATLSILRNATWTLSNFF 227
Query: 265 SG 266
G
Sbjct: 228 RG 229
>AT5G52000.1 | Symbols: IMPA-8 | IMPA-8 (IMPORTIN ALPHA ISOFORM 8);
binding / protein transporter | chr5:21119024-21121119
REVERSE
Length = 441
Score = 360 bits (924), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/363 (53%), Positives = 238/363 (65%), Gaps = 10/363 (2%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
+E AWALTNIA AVP+ ++L++SP D VREQA+W L N+AG S R
Sbjct: 68 YEVAWALTNIAVDNPGVVVNN---NAVPVLIQLIASPKDYVREQAIWTLSNVAGHSIHYR 124
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHS 120
D VL G LMPLL K + LR ATW L N CRGKP P F+Q KPALPALE L+HS
Sbjct: 125 DFVLNSGVLMPLLRLL---YKDTTLRIATWALRNLCRGKPHPAFDQVKPALPALEILLHS 181
Query: 121 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVT 180
+DE+VL +AC AL +LS+G+ D IQ+VIEAG P+LV++L PSP VL+PAL TIG +
Sbjct: 182 HDEDVLKNACMALCHLSEGSEDGIQSVIEAGFVPKLVQILQLPSPVVLVPALLTIGAMTA 241
Query: 181 GDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXP 240
G+ QTQC+IN ALP + N+LT N++ IKK ACW ISNITAG
Sbjct: 242 GNHQQTQCVINSGALPIISNMLTRNHENKIKKCACWVISNITAGTKEQIQSVIDANLIPI 301
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTV-C 299
LV L Q +F +KKEA WAISN GSH+QIK++ Q CIK LCD+L+ D R + C
Sbjct: 302 LVNLAQDTDFYMKKEAVWAISNMALNGSHDQIKYMAEQSCIKQLCDILVYSDERTTILKC 361
Query: 300 LEGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILET 359
L+GLEN+LK GEAEK NS + N Y LI+DAEGLEKI LQ + N DIYEKA KIL T
Sbjct: 362 LDGLENMLKAGEAEK---NSEDVNPYCLLIEDAEGLEKISKLQMNKNDDIYEKAYKILVT 418
Query: 360 YWL 362
W
Sbjct: 419 NWF 421
>AT1G32880.1 | Symbols: | importin alpha-1 subunit, putative |
chr1:11913928-11914735 REVERSE
Length = 183
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 101/125 (80%), Gaps = 3/125 (2%)
Query: 241 LVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCL 300
LV+L Q AEF++KKE+ AISNAT GSH+QIK++V Q CIKPLCD+L CPD + + CL
Sbjct: 53 LVKLTQNAEFDMKKESVCAISNATLLGSHDQIKYMVEQSCIKPLCDILFCPDVKTILKCL 112
Query: 301 EGLENILKVGEAEKNLGNSGETNLYAQLIDDAEGLEKIENLQSHDNHDIYEKAVKILETY 360
+G+EN LKVGEAEKN G+ + + Y +LI +AEGL+KI NLQ H+N +IY+KA+KIL+TY
Sbjct: 113 DGMENTLKVGEAEKNAGD--DVSWYTRLI-EAEGLDKILNLQRHENIEIYDKALKILQTY 169
Query: 361 WLEED 365
WLEED
Sbjct: 170 WLEED 174
>AT5G03070.1 | Symbols: IMPA-9 | IMPA-9 (IMPORTIN ALPHA ISOFORM 9);
binding | chr5:718468-721395 REVERSE
Length = 519
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 185/385 (48%), Gaps = 36/385 (9%)
Query: 1 FEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCR 60
E+AW LTNIA+G E T+ ++ + I L + V EQ WA+GN+AG+ R
Sbjct: 145 LESAWCLTNIAAGKPEETKALLPALPLLI-AHLGEKSSAPVAEQCAWAIGNVAGEGEDLR 203
Query: 61 DLVLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRG---KPQPLFEQTKPALPALERL 117
+++L GAL PL A+ K S +R A W LSN +G K + L A+ R
Sbjct: 204 NVLLSQGALPPL-ARMIFPDKGSTVRTAAWALSNLIKGPESKAAAQLVKIDGILDAILRH 262
Query: 118 IHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSP-TVLIPALRTIG 176
+ DEE T+ W + YLS ++ +++ G+ L++ L S +LIP LR++G
Sbjct: 263 LKKTDEETATEIAWIIVYLSALSDIATSMLLKGGILQLLIDRLATSSSLQLLIPVLRSLG 322
Query: 177 NIVTGDDMQTQCII-----NHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXX 231
N V D I+ +++ +L + + +KKEA W +SNI AG++
Sbjct: 323 NFVAVDPKAVLTILIREQNTEESIIGVLAKCLRSEHRVLKKEAAWVLSNIAAGSIEHKRM 382
Query: 232 XXXXXXXXPLVQLLQIAEFEIKKEAAWAISN----ATSGGS-----HEQIKFLVSQGCIK 282
L+++L + F+I+KE A+ + N + G E + +VS GC++
Sbjct: 383 IHSTEVMPLLLRILSTSPFDIRKEVAYVLGNLCVESAEGDRKPRIIQEHLVSIVSGGCLR 442
Query: 283 PLCDLLICPDPRIVTVCLEGLENILKV---GEAEKNLGNSGETNLYAQLIDDAEGLEKIE 339
+L+ PD + L+ +E +L+ GE K L++ +G++ +E
Sbjct: 443 GFIELVRSPDIEAARLGLQFIELVLRGMPNGEGPK-------------LVEGEDGIDAME 489
Query: 340 NLQSHDNHDIYEKAVKILETYWLEE 364
Q H+N ++ A +++ Y+ E+
Sbjct: 490 RFQFHENEELRVMANSLVDKYFGED 514
>AT5G13060.1 | Symbols: ABAP1 | ABAP1 (ARMADILLO BTB ARABIDOPSIS
PROTEIN 1); protein binding | chr5:4142958-4146952
FORWARD
Length = 737
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 135/306 (44%), Gaps = 23/306 (7%)
Query: 2 EAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSP-----------TDDVREQAVWALG 50
EAA + ++A EN +++++GA+P V+ L SP + + ALG
Sbjct: 100 EAAADIADLAK-IDENVEIIVENGAIPALVRYLESPLVVCGNVPKSCEHKLEKDCALALG 158
Query: 51 NIAGDSPKCRDLVLGHGALMPLLAQFNEHAKL-------SMLRNATWTLSNFCRGKPQPL 103
IA P + L++ GA++P + + +++R A ++N P+
Sbjct: 159 LIAAIQPGYQQLIVDAGAIVPTVKLLKRRGECGECMFANAVIRRAADIITNIAHDNPRIK 218
Query: 104 FE-QTKPALPALERLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLH 162
+ + + L L++ D +V A AL +S ++ ++E P LV +L
Sbjct: 219 TNIRVEGGIAPLVELLNFPDVKVQRAAAGALRTVSFRNDENKSQIVELNALPTLVLMLQS 278
Query: 163 PSPTVLIPALRTIGNIVTGDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNIT 222
TV A+ IGN+V + +I AL ++ LL+ ++ ++EA I
Sbjct: 279 QDSTVHGEAIGAIGNLVHSSPDIKKEVIRAGALQPVIGLLSSTCLET-QREAALLIGQFA 337
Query: 223 AGNVNXXXXXXXXXXXXPLVQLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQGCIK 282
A + + PL+++L+ ++ ++ + +A+A+ + +H Q + +G I
Sbjct: 338 APDSDCKVHIAQRGAITPLIKMLESSDEQVVEMSAFALGR-LAQDAHNQAG-IAHRGGII 395
Query: 283 PLCDLL 288
L +LL
Sbjct: 396 SLLNLL 401
>AT5G19330.2 | Symbols: | armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein |
chr5:6508300-6512701 REVERSE
Length = 636
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 22/279 (7%)
Query: 2 EAAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSP------------TDDVREQAVWAL 49
A L +A + V++D GAVP + L +P +V + + +AL
Sbjct: 73 RATQVLAELAKNAEDLVNVIVDGGAVPALMTHLQAPPYNDGDLAEKPYEHEVEKGSAFAL 132
Query: 50 GNIAGDSPKCRDLVLGHGALMPL--LAQFNE-----HAKLSMLRNATWTLSNFCRGKPQ- 101
G +A P+ + L++ GAL L L + N+ A S++R A ++N
Sbjct: 133 GLLA-IKPEYQKLIVDKGALPHLVNLLKRNKDGSSSRAVNSVIRRAADAITNLAHENSSI 191
Query: 102 PLFEQTKPALPALERLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLL 161
+ + +P L L+ +D +V A AL L+ +D ++E P L+ +L
Sbjct: 192 KTRVRVEGGIPPLVELLEFSDSKVQRAAAGALRTLAFKNDDNKNQIVECNALPTLILMLG 251
Query: 162 HPSPTVLIPALRTIGNIVTGDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNI 221
+ A+ IGN+V + ++ AL ++ LL+ +S ++EA +
Sbjct: 252 SEDAAIHYEAVGVIGNLVHSSPHIKKEVLTAGALQPVIGLLSSCCPES-QREAALLLGQF 310
Query: 222 TAGNVNXXXXXXXXXXXXPLVQLLQIAEFEIKKEAAWAI 260
+ + + PL+++LQ + ++K+ +A+A+
Sbjct: 311 ASTDSDCKVHIVQRGAVRPLIEMLQSPDVQLKEMSAFAL 349
>AT5G19330.1 | Symbols: | armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein |
chr5:6508095-6512701 REVERSE
Length = 710
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 116/261 (44%), Gaps = 22/261 (8%)
Query: 20 VVIDHGAVPIFVKLLSSP------------TDDVREQAVWALGNIAGDSPKCRDLVLGHG 67
V++D GAVP + L +P +V + + +ALG +A P+ + L++ G
Sbjct: 90 VIVDGGAVPALMTHLQAPPYNDGDLAEKPYEHEVEKGSAFALGLLA-IKPEYQKLIVDKG 148
Query: 68 ALMPL--LAQFNE-----HAKLSMLRNATWTLSNFCRGKPQ-PLFEQTKPALPALERLIH 119
AL L L + N+ A S++R A ++N + + +P L L+
Sbjct: 149 ALPHLVNLLKRNKDGSSSRAVNSVIRRAADAITNLAHENSSIKTRVRVEGGIPPLVELLE 208
Query: 120 SNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIV 179
+D +V A AL L+ +D ++E P L+ +L + A+ IGN+V
Sbjct: 209 FSDSKVQRAAAGALRTLAFKNDDNKNQIVECNALPTLILMLGSEDAAIHYEAVGVIGNLV 268
Query: 180 TGDDMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXX 239
+ ++ AL ++ LL+ +S ++EA + + + +
Sbjct: 269 HSSPHIKKEVLTAGALQPVIGLLSSCCPES-QREAALLLGQFASTDSDCKVHIVQRGAVR 327
Query: 240 PLVQLLQIAEFEIKKEAAWAI 260
PL+++LQ + ++K+ +A+A+
Sbjct: 328 PLIEMLQSPDVQLKEMSAFAL 348
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | PUB13 (PLANT U-BOX 13);
ubiquitin-protein ligase | chr3:17124106-17126539
REVERSE
Length = 660
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 6/276 (2%)
Query: 3 AAWALTNIASGTSENTRVVIDHGAVPIFVKLLSSPTDDVREQAVWALGNIAGDSPKCRDL 62
AA + +A ++N + + GA+P+ V LLS+P ++E +V AL N++ +
Sbjct: 372 AAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLS-ICENNKGA 430
Query: 63 VLGHGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHSND 122
++ GA+ P + Q + + NA TL + + A+P L L++
Sbjct: 431 IVSAGAI-PGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGT 489
Query: 123 EEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPTVLIPALRTIGNIVTGD 182
+ DA AL L +K +A I AGV P L LL P ++ AL + I++
Sbjct: 490 QRGKKDAATALFNLCIYQGNKGKA-IRAGVIPTLTRLLTEPGSGMVDEALAILA-ILSSH 547
Query: 183 DMQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNVNXXXXXXXXXXXXPLV 242
I + A+P L+ + ++ ++ A + ++ +G+ PL+
Sbjct: 548 PEGKAIIGSSDAVPSLVEFIRTGSPRN-RENAAAVLVHLCSGDPQHLVEAQKLGLMGPLI 606
Query: 243 QLLQIAEFEIKKEAAWAISNATSGGSHEQIKFLVSQ 278
L K++AA + S + +Q + VSQ
Sbjct: 607 DLAGNGTDRGKRKAAQLLER-ISRLAEQQKETAVSQ 641