Jatropha Genome Database

JcCA0258831.20
Show Alignment: 
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0258831.20 - phase: 0 /partial
         (254 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G63100.1 | Symbols:  | scarecrow transcription factor family ...   353   6e-98
AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1); transcript...   166   2e-41
AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription f...   154   4e-38
AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor ...   151   5e-37
AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID INSENSI...   149   2e-36
AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein bind...   147   9e-36
AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1); ...   146   1e-35
AT1G55580.1 | Symbols: LAS, SCL18 | LAS (Lateral Suppressor); tr...   144   6e-35
AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3); transcr...   143   8e-35
AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor | chr1:...   138   4e-33
AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal transdu...   134   8e-32
AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal transdu...   134   8e-32
AT2G29060.1 | Symbols:  | scarecrow transcription factor family ...   132   3e-31
AT5G66770.1 | Symbols:  | scarecrow transcription factor family ...   130   6e-31
AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14 (SCARECROW-...   128   4e-30
AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13); transc...   127   9e-30
AT5G41920.1 | Symbols:  | scarecrow transcription factor family ...   123   1e-28
AT3G50650.1 | Symbols:  | scarecrow-like transcription factor 7 ...   122   2e-28
AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21); transc...   120   6e-28
AT1G07520.1 | Symbols:  | scarecrow transcription factor family ...   116   1e-26
AT5G59450.1 | Symbols:  | scarecrow-like transcription factor 11...   115   3e-26
AT3G46600.1 | Symbols:  | scarecrow transcription factor family ...   114   7e-26
AT3G46600.2 | Symbols:  | scarecrow transcription factor family ...   114   7e-26
AT3G46600.3 | Symbols:  | scarecrow transcription factor family ...   114   8e-26
AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1); transcrip...   112   2e-25
AT4G37650.1 | Symbols: SHR, SGR7 | SHR (SHORT ROOT); protein bin...   108   4e-24
AT2G37650.1 | Symbols:  | scarecrow-like transcription factor 9 ...    99   4e-21
AT5G52510.1 | Symbols:  | scarecrow-like transcription factor 8 ...    97   9e-21
AT4G08250.1 | Symbols:  | scarecrow transcription factor family ...    93   2e-19
AT3G49950.1 | Symbols:  | scarecrow transcription factor family ...    74   1e-13
AT2G45160.1 | Symbols:  | scarecrow transcription factor family ...    62   3e-10
AT3G60630.1 | Symbols:  | scarecrow transcription factor family ...    62   4e-10
AT4G36710.1 | Symbols:  | transcription factor | chr4:17306060-1...    51   7e-07
AT5G67411.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    51   8e-07

>AT1G63100.1 | Symbols:  | scarecrow transcription factor family
           protein | chr1:23399391-23401367 REVERSE
          Length = 658

 Score =  353 bits (906), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 170/250 (68%), Positives = 201/250 (80%), Gaps = 11/250 (4%)

Query: 1   SLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLH 60
           SLASR NPP HVRITGIGESK ELNETGDRL GFAEA+NL FEFHPVVDRLEDVRLWMLH
Sbjct: 405 SLASRINPPHHVRITGIGESKLELNETGDRLHGFAEAMNLQFEFHPVVDRLEDVRLWMLH 464

Query: 61  VKEGESVAINCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEHNAPNLETRV 120
           VKEGESVA+NC+ QMH+TLYDG G A+RDFLGLIRST+P  +++AEQEAEHN+  LETRV
Sbjct: 465 VKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPIALVLAEQEAEHNSEQLETRV 524

Query: 121 CNSLKYYSAIFDSIDSSLALDSPVRIKVEEM-FAREIRNIVACEGSDRLERHESFEKWRN 179
           CNSLKYYSA+FD+I ++LA DS +R+KVEEM F REIRNIVACEGS R ERH  F  WR 
Sbjct: 525 CNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRR 584

Query: 180 LMEQGGFRCMGISDREMLQCQMLLKMYSCED---YRVTKQGQDG-------AAVTLSWLD 229
           ++EQ GFR +G+S+RE+LQ +MLL+MY  ++   + V +  +D          VTL W +
Sbjct: 585 MLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSE 644

Query: 230 QPLYTVSAWA 239
           QPLYT+SAW 
Sbjct: 645 QPLYTISAWT 654


>AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1); transcription
           factor | chr1:24748327-24749862 FORWARD
          Length = 511

 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/241 (38%), Positives = 136/241 (56%), Gaps = 11/241 (4%)

Query: 1   SLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPV-VDRLEDVRLWML 59
           +LA R N P   R+TGIG S  ++ E G +L   A  + + FEF  + ++ L D++  ML
Sbjct: 273 ALALRPNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEML 332

Query: 60  HVKEG-ESVAINCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEHNAPNLET 118
            ++ G ESVA+N +F++HR L   + G++  FL  I+S  P I+ + EQEA HN      
Sbjct: 333 DIRPGLESVAVNSVFELHRLL--AHPGSIDKFLSTIKSIRPDIMTVVEQEANHNGTVFLD 390

Query: 119 RVCNSLKYYSAIFDSIDSSLALDSPVRIKVEEMFAREIRNIVACEGSDRLERHESFEKWR 178
           R   SL YYS++FDS++   + D   R+  E    R+I N+VACEG DR+ERHE+  +WR
Sbjct: 391 RFTESLHYYSSLFDSLEGPPSQD---RVMSELFLGRQILNLVACEGEDRVERHETLNQWR 447

Query: 179 NLMEQGGFRCMGISDREMLQCQMLLKMYSCED-YRVTKQGQDGAAVTLSWLDQPLYTVSA 237
           N    GGF+ + I      Q  MLL +Y+  D Y V    ++   + L W  +PL   SA
Sbjct: 448 NRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVE---ENEGCLLLGWQTRPLIATSA 504

Query: 238 W 238
           W
Sbjct: 505 W 505


>AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription
           factor | chr3:819636-821279 REVERSE
          Length = 547

 Score =  154 bits (390), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 136/245 (55%), Gaps = 12/245 (4%)

Query: 1   SLASRTNPPSHVRITGIG----ESKQELNETGDRLAGFAEALNLPFEFHPVV-DRLEDVR 55
           +LA R   P   R+TGIG    E+   L + G +LA FA+ + + FEF  +  + L D+ 
Sbjct: 305 ALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLE 364

Query: 56  LWMLHVK-EGESVAINCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEHNAP 114
             M   + E E++ +N +F++HR L     G++   L  +++  P+IV + EQEA HN  
Sbjct: 365 PEMFETRPESETLVVNSVFELHRLL--ARSGSIEKLLNTVKAIKPSIVTVVEQEANHNGI 422

Query: 115 NLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEEMFAREIRNIVACEGSDRLERHESF 174
               R   +L YYS++FDS++ S +L S  R+  E    R+I N+VA EGSDR+ERHE+ 
Sbjct: 423 VFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYLGRQILNVVAAEGSDRVERHETA 482

Query: 175 EKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCED-YRVTKQGQDGAAVTLSWLDQPLY 233
            +WR  M+  GF  + +      Q  MLL +Y+  D YRV +   DG  + + W  +PL 
Sbjct: 483 AQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEE--NDG-CLMIGWQTRPLI 539

Query: 234 TVSAW 238
           T SAW
Sbjct: 540 TTSAW 544


>AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor |
           chr1:18678177-18679625 REVERSE
          Length = 482

 Score =  151 bits (381), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 146/295 (49%), Gaps = 63/295 (21%)

Query: 4   SRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKE 63
           SR   P H+RITG+   K+ L +   RL   AE L++PF+F+PVV RL+ + +  L VK 
Sbjct: 187 SRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIPFQFNPVVSRLDCLNVEQLRVKT 246

Query: 64  GESVAI-------------------NCIFQ---------MHRTLYDGNGGALR------- 88
           GE++A+                   NC  +         + R L   +G A         
Sbjct: 247 GEALAVSSVLQLHTFLASDDDLMRKNCALRFQNNPSGVDLQRVLMMSHGSAAEARENDMS 306

Query: 89  ------------------------DFLGLIRSTSPTIVLMAEQEAEHNAPNLETRVCNSL 124
                                    FL  I   SP ++++ EQ+++HN   L  R+  SL
Sbjct: 307 NNNGYSPSGDSASSLPLPSSGRTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESL 366

Query: 125 KYYSAIFDSIDSSLALDSPVRIKVEEM-FAREIRNIVACEGSDRLERHESFEKWRNLMEQ 183
             Y+A+FD +++ +   S  RIKVE+M F  EI+NI++CEG +R ERHE  EKW   ++ 
Sbjct: 367 YTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDL 426

Query: 184 GGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQPLYTVSAW 238
            GF  + +S   MLQ + LL+    + YR+ ++   G AV + W D+PLY+VSAW
Sbjct: 427 AGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEES--GCAV-ICWQDRPLYSVSAW 478


>AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID
           INSENSITIVE); transcription factor |
           chr1:5149414-5151015 FORWARD
          Length = 533

 Score =  149 bits (375), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/246 (36%), Positives = 134/246 (54%), Gaps = 15/246 (6%)

Query: 1   SLASRTNPPSHVRITGIGESKQE----LNETGDRLAGFAEALNLPFEFHP-VVDRLEDVR 55
           +LA R   P   R+TGIG    +    L+E G +LA  AEA+++ FE+   V + L D+ 
Sbjct: 290 ALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADLD 349

Query: 56  LWMLHVK--EGESVAINCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEHNA 113
             ML ++  E ESVA+N +F++H+ L  G  GA+   LG++    P I  + EQE+ HN+
Sbjct: 350 ASMLELRPSEIESVAVNSVFELHKLL--GRPGAIDKVLGVVNQIKPEIFTVVEQESNHNS 407

Query: 114 PNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEEMFAREIRNIVACEGSDRLERHES 173
           P    R   SL YYS +FDS++   +     ++  E    ++I N+VAC+G DR+ERHE+
Sbjct: 408 PIFLDRFTESLHYYSTLFDSLEGVPSGQD--KVMSEVYLGKQICNVVACDGPDRVERHET 465

Query: 174 FEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYS-CEDYRVTKQGQDGAAVTLSWLDQPL 232
             +WRN     GF    I      Q  MLL +++  E YRV +   DG  + L W  +PL
Sbjct: 466 LSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEE--SDG-CLMLGWHTRPL 522

Query: 233 YTVSAW 238
              SAW
Sbjct: 523 IATSAW 528


>AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein binding
           / protein homodimerization/ sequence-specific DNA
           binding / transcription factor | chr3:20070550-20072625
           FORWARD
          Length = 653

 Score =  147 bits (370), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 10/240 (4%)

Query: 2   LASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHV 61
           LASR   P HVR+TG+G S + L  TG RL+ FA+ L LPFEF P+ +++ ++    L+V
Sbjct: 421 LASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLPFEFCPLAEKVGNLDTERLNV 480

Query: 62  KEGESVAINCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEHNAPNLETRVC 121
           ++ E+VA++    +  +LYD  G      L L++  +P +V + EQ+  H A +   R  
Sbjct: 481 RKREAVAVHW---LQHSLYDVTGSDAHT-LWLLQRLAPKVVTVVEQDLSH-AGSFLGRFV 535

Query: 122 NSLKYYSAIFDSIDSSLALDSPVRIKVE-EMFAREIRNIVACEGSDRLERHESFEKWRNL 180
            ++ YYSA+FDS+ +S   +S  R  VE ++ ++EIRN++A  G  R      FE WR  
Sbjct: 536 EAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSR-SGEVKFESWREK 594

Query: 181 MEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQPLYTVSAWAP 240
           M+Q GF+ + ++     Q  +LL M+  + Y +     D   + L W D  L T SAW P
Sbjct: 595 MQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVD---DNGTLKLGWKDLSLLTASAWTP 651


>AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1);
           protein binding / transcription factor |
           chr2:255581-257344 REVERSE
          Length = 587

 Score =  146 bits (369), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 132/246 (53%), Gaps = 15/246 (6%)

Query: 1   SLASRTNPPSHVRITGIG----ESKQELNETGDRLAGFAEALNLPFEFHP-VVDRLEDVR 55
           +LA R   P   R+TGIG    ++   L+E G +LA  AEA+++ FE+   V + L D+ 
Sbjct: 342 ALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLD 401

Query: 56  LWMLHVK--EGESVAINCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEHNA 113
             ML ++  + E+VA+N +F++H+ L  G  G +   LG+++   P I  + EQE+ HN 
Sbjct: 402 ASMLELRPSDTEAVAVNSVFELHKLL--GRPGGIEKVLGVVKQIKPVIFTVVEQESNHNG 459

Query: 114 PNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEEMFAREIRNIVACEGSDRLERHES 173
           P    R   SL YYS +FDS++     +S  ++  E    ++I N+VACEG DR+ERHE+
Sbjct: 460 PVFLDRFTESLHYYSTLFDSLEG--VPNSQDKVMSEVYLGKQICNLVACEGPDRVERHET 517

Query: 174 FEKWRNLMEQGGFRCMGISDREMLQCQMLLKMY-SCEDYRVTKQGQDGAAVTLSWLDQPL 232
             +W N     G     +      Q  MLL ++ S + YRV    +    + L W  +PL
Sbjct: 518 LSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVE---ESNGCLMLGWHTRPL 574

Query: 233 YTVSAW 238
            T SAW
Sbjct: 575 ITTSAW 580


>AT1G55580.1 | Symbols: LAS, SCL18 | LAS (Lateral Suppressor);
           transcription factor | chr1:20764106-20765443 FORWARD
          Length = 445

 Score =  144 bits (363), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 140/236 (59%), Gaps = 13/236 (5%)

Query: 12  VRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDV-------RLWMLHVKEG 64
           +RITG G     LN TGDRL  FA++L L F+FH +V   ED+       RL  L   +G
Sbjct: 213 LRITGCGRDVTGLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQG 272

Query: 65  ESVAINCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEHNAPNLETRVCNSL 124
           E++A+NC+  +H+ +++ +G  +  FL  I+S +  IV MAE+EA H   +   R   ++
Sbjct: 273 ETIAVNCVHFLHK-IFNDDGDMIGHFLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAV 331

Query: 125 KYYSAIFDSIDSSLALDSPVRIKVEE-MFAREIRNIVACEGSDRLERHESFEKWRNLMEQ 183
            +Y AIFDS++++L  +S  R+ +E+  F +EI ++VA E ++R +RH  FE W  +M++
Sbjct: 332 DHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKR 391

Query: 184 GGFRCMGISDREMLQCQMLLKM-YSCEDYRVTKQGQDGAAVTLSWLDQPLYTVSAW 238
            GF  + I    + Q ++LL++ Y  E Y +        ++ L W ++PL++VS+W
Sbjct: 392 FGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNN---SLFLGWQNRPLFSVSSW 444


>AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3);
           transcription factor | chr5:5764316-5765887 REVERSE
          Length = 523

 Score =  143 bits (361), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 134/243 (55%), Gaps = 10/243 (4%)

Query: 1   SLASRTNPPSHVRITGIGE--SKQELNETGDRLAGFAEALNLPFEFHPVV-DRLEDVRLW 57
           +LA R   P   R+TG+G   +++ + E G +LA  A+A+ + F+F+ +  +RL D+   
Sbjct: 278 ALALRPGGPPSFRLTGVGNPSNREGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPD 337

Query: 58  MLHVK-EGESVAINCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEHNAPNL 116
           M   + E E++ +N +F++H  L     G++   L  +++  P +V + EQEA HN    
Sbjct: 338 MFETRTESETLVVNSVFELHPVL--SQPGSIEKLLATVKAVKPGLVTVVEQEANHNGDVF 395

Query: 117 ETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEEMFAREIRNIVACEGSDRLERHESFEK 176
             R   +L YYS++FDS++  + + S  R+  E    R+I N+VA EGSDR+ERHE+  +
Sbjct: 396 LDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLVATEGSDRIERHETLAQ 455

Query: 177 WRNLMEQGGFRCMGISDREMLQCQMLLKMYSCED-YRVTKQGQDGAAVTLSWLDQPLYTV 235
           WR  M   GF  + +      Q  +LL +    D YRV +   DG ++ L+W  +PL   
Sbjct: 456 WRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEE--NDG-SLMLAWQTKPLIAA 512

Query: 236 SAW 238
           SAW
Sbjct: 513 SAW 515


>AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
           chr1:18737398-18739547 REVERSE
          Length = 597

 Score =  138 bits (347), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/251 (36%), Positives = 129/251 (51%), Gaps = 21/251 (8%)

Query: 1   SLASRTNPPSHVRITGIGESKQE------LNETGDRLAGFAEALNLPFEFHPVVDRLEDV 54
           +L +R   P +VRITGI + +        L   G RL   AE   +PFEFH       +V
Sbjct: 354 ALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEV 413

Query: 55  RLWMLHVKEGESVAINCIFQMHR------TLYDGNGGALRDFLGLIRSTSPTIVLMAEQE 108
            +  L V+ GE++A+N    +H       T+ +     LR    L++  SP +V + EQE
Sbjct: 414 EIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLR----LVKHLSPNVVTLVEQE 469

Query: 109 AEHNAPNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEEM-FAREIRNIVACEGSDR 167
           A  N      R   ++ +Y A+F+SID  LA D   RI VE+   ARE+ N++ACEG +R
Sbjct: 470 ANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVER 529

Query: 168 LERHESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSW 227
            ERHE   KWR+     GF+   +S       + LL+ YS E Y  T + +DG A+ L W
Sbjct: 530 EERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYS-EKY--TLEERDG-ALYLGW 585

Query: 228 LDQPLYTVSAW 238
            +QPL T  AW
Sbjct: 586 KNQPLITSCAW 596


>AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
           transduction 1); signal transducer/ transcription factor
           | chr5:19522497-19524053 REVERSE
          Length = 490

 Score =  134 bits (336), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 136/247 (55%), Gaps = 13/247 (5%)

Query: 1   SLASRTNPPSHVRITGIGESKQE------LNETGDRLAGFAEALNLPFEFHPVVDRLEDV 54
           + A+R   P  +RITGI +          L+  G+RLA  A+  N+PFEF+ V   + +V
Sbjct: 247 AFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEV 306

Query: 55  RLWMLHVKEGESVAINCIFQMHRTLYDG-NGGALRD-FLGLIRSTSPTIVLMAEQEAEHN 112
           +   L V+ GE++A+N  F +H    +  +    RD  L +++S SP +V + EQE+  N
Sbjct: 307 KPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTN 366

Query: 113 APNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEE-MFAREIRNIVACEGSDRLERH 171
                 R   ++ YY+A+F+SID +L  D   RI VE+   AR++ NI+ACEG+DR+ERH
Sbjct: 367 TAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERH 426

Query: 172 ESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQP 231
           E   KWR+     GF    +S       + LL+ YS + YR+  + +DG A+ L W+ + 
Sbjct: 427 ELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYS-DKYRL--EERDG-ALYLGWMHRD 482

Query: 232 LYTVSAW 238
           L    AW
Sbjct: 483 LVASCAW 489


>AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
           transduction 1); signal transducer/ transcription factor
           | chr5:19522497-19524053 REVERSE
          Length = 490

 Score =  134 bits (336), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 136/247 (55%), Gaps = 13/247 (5%)

Query: 1   SLASRTNPPSHVRITGIGESKQE------LNETGDRLAGFAEALNLPFEFHPVVDRLEDV 54
           + A+R   P  +RITGI +          L+  G+RLA  A+  N+PFEF+ V   + +V
Sbjct: 247 AFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEV 306

Query: 55  RLWMLHVKEGESVAINCIFQMHRTLYDG-NGGALRD-FLGLIRSTSPTIVLMAEQEAEHN 112
           +   L V+ GE++A+N  F +H    +  +    RD  L +++S SP +V + EQE+  N
Sbjct: 307 KPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTN 366

Query: 113 APNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEE-MFAREIRNIVACEGSDRLERH 171
                 R   ++ YY+A+F+SID +L  D   RI VE+   AR++ NI+ACEG+DR+ERH
Sbjct: 367 TAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERH 426

Query: 172 ESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQP 231
           E   KWR+     GF    +S       + LL+ YS + YR+  + +DG A+ L W+ + 
Sbjct: 427 ELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYS-DKYRL--EERDG-ALYLGWMHRD 482

Query: 232 LYTVSAW 238
           L    AW
Sbjct: 483 LVASCAW 489


>AT2G29060.1 | Symbols:  | scarecrow transcription factor family
           protein | chr2:12481991-12486941 FORWARD
          Length = 1336

 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 136/251 (54%), Gaps = 17/251 (6%)

Query: 2   LASRTNPPSHVRITGIGESKQELN------ETGDRLAGFAEALNLPFEFHPVVDRLEDVR 55
           LA R      +RITGI   ++         ETG RLA + +  N+PFE++ +  + E ++
Sbjct: 448 LAWRRGSSCKLRITGIELPQRGFRPAEGVIETGRRLAKYCQKFNIPFEYNAIAQKWESIK 507

Query: 56  LWMLHVKEGESVAINCIFQMHRTLYDGNGG--ALRD-FLGLIRSTSPTIVLMAEQEAEHN 112
           L  L +KEGE VA+N +F+  R L D      + RD  L LIR   P + +       +N
Sbjct: 508 LEDLKLKEGEFVAVNSLFRF-RNLLDETVAVHSPRDTVLKLIRKIKPDVFIPGILSGSYN 566

Query: 113 APNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVE-EMFAREIRNIVACEGSDRLERH 171
           AP   TR    L +YS++FD  D++L  + P+R+  E E + REI N+VACEG++R+ER 
Sbjct: 567 APFFVTRFREVLFHYSSLFDMCDTNLTREDPMRVMFEKEFYGREIMNVVACEGTERVERP 626

Query: 172 ESFEKWRNLMEQGGFRCMGISDREMLQCQMLL--KMYSCEDYRVTKQGQDGAAVTLSWLD 229
           ES+++W+    + GFR + + ++E++Q   L+    Y  +++ V    QD   +   W  
Sbjct: 627 ESYKQWQARAMRAGFRQIPL-EKELVQKLKLMVESGYKPKEFDV---DQDCHWLLQGWKG 682

Query: 230 QPLYTVSAWAP 240
           + +Y  S W P
Sbjct: 683 RIVYGSSIWVP 693



 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 132/255 (51%), Gaps = 19/255 (7%)

Query: 1    SLASRTNPPSHVRITGIG------ESKQELNETGDRLAGFAEALNLPFEFHPVVDR-LED 53
            S++ R + P  +RITGI          + + ETG RLA + +  N+PFE+  +  +  E 
Sbjct: 1087 SISDRKDVPRKLRITGIELPQCGFRPAERIEETGRRLAEYCKRFNVPFEYKAIASQNWET 1146

Query: 54   VRLWMLHVKEGESVAINCIFQMHRTLYDGNG---GALRD-FLGLIRSTSPTIVLMAEQEA 109
            +R+  L ++  E +A+N   ++ + L D  G      RD  L LIR+ +P + + A    
Sbjct: 1147 IRIEDLDIRPNEVLAVNAGLRL-KNLQDETGSEENCPRDAVLKLIRNMNPDVFIHAIVNG 1205

Query: 110  EHNAPNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVE-EMFAREIRNIVACEGSDRL 168
              NAP   +R   ++ +YSA+FD  DS+L  D+  RI+ E E + RE  N++ACE +DR+
Sbjct: 1206 SFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNKERIRFEREFYGREAMNVIACEEADRV 1265

Query: 169  ERHESFEKWRNLMEQGGFRCMGISDR--EMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLS 226
            ER E++ +W+  M + GF+   I     E+ + + L K    +D+ V    ++   +   
Sbjct: 1266 ERPETYRQWQVRMVRAGFKQKTIKPELVELFRGK-LKKWRYHKDFVV---DENSKWLLQG 1321

Query: 227  WLDQPLYTVSAWAPV 241
            W  + LY  S W P 
Sbjct: 1322 WKGRTLYASSCWVPA 1336


>AT5G66770.1 | Symbols:  | scarecrow transcription factor family
           protein | chr5:26660723-26662477 FORWARD
          Length = 584

 Score =  130 bits (328), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 140/247 (56%), Gaps = 11/247 (4%)

Query: 1   SLASRTN-PPSHVRITGI-----GESKQ-ELNETGDRLAGFAEALNLPFEFHPVVDRLED 53
           +LA+RT+  P+ +R++GI     GES +  L  TG+RL  FA+ L+L F+F P++  +  
Sbjct: 339 ALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHL 398

Query: 54  VRLWMLHVKEGESVAINCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEHNA 113
           +      V   E +A+N + Q+++ L D     +   L L +S +P +V + E E   N 
Sbjct: 399 LNGSSFRVDPDEVLAVNFMLQLYK-LLDETPTIVDTALRLAKSLNPRVVTLGEYEVSLNR 457

Query: 114 PNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVE-EMFAREIRNIVACEGSD-RLERH 171
                RV N+L++YSA+F+S++ +L  DS  R++VE E+F R I  ++  E +    ER 
Sbjct: 458 VGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIHRERM 517

Query: 172 ESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQP 231
           E  E+WR LME  GF  + +S+  + Q ++LL  Y+  +     + + G  ++L+W D P
Sbjct: 518 EEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPG-FISLAWNDLP 576

Query: 232 LYTVSAW 238
           L T+S+W
Sbjct: 577 LLTLSSW 583


>AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14
           (SCARECROW-LIKE 14); transcription factor |
           chr1:2313828-2316137 REVERSE
          Length = 769

 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 137/247 (55%), Gaps = 14/247 (5%)

Query: 4   SRTNPPSHVRITGIG------ESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLW 57
           SR      +RITGI          + + ETG RLA + +  N+PFE++ +  + E +++ 
Sbjct: 524 SRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNAIAQKWETIQVE 583

Query: 58  MLHVKEGESVAINCIFQMHRTLYDGNG--GALRD-FLGLIRSTSPTIVLMAEQEAEHNAP 114
            L +++GE V +N +F+  R L D      + RD  L LIR  +P + + A     +NAP
Sbjct: 584 DLKLRQGEYVVVNSLFRF-RNLLDETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAP 642

Query: 115 NLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVE-EMFAREIRNIVACEGSDRLERHES 173
              TR   +L +YSA+FD  DS LA +  +R+  E E + REI N+VACEG++R+ER E+
Sbjct: 643 FFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPET 702

Query: 174 FEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQPLY 233
           +++W+  + + GFR + + ++E++Q  + LK+ +  D       Q+G  +   W  + +Y
Sbjct: 703 YKQWQARLIRAGFRQLPL-EKELMQ-NLKLKIENGYDKNFDVD-QNGNWLLQGWKGRIVY 759

Query: 234 TVSAWAP 240
             S W P
Sbjct: 760 ASSLWVP 766


>AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
           transcription factor | chr4:9661218-9662807 REVERSE
          Length = 529

 Score =  127 bits (318), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 131/248 (52%), Gaps = 13/248 (5%)

Query: 2   LASRTNPPSHVRITGIGESKQE------LNETGDRLAGFAEALNLPFEFHPVVDRLEDVR 55
           LA R   P  +R+TG+ +S+        L+  G+RLA  A++  +PFEFH  +     V+
Sbjct: 283 LAKRPGGPPLLRVTGVDDSQSTYARGGGLSLVGERLATLAQSCGVPFEFHDAIMSGCKVQ 342

Query: 56  LWMLHVKEGESVAINCIFQMHRTLYDG-NGGALRD-FLGLIRSTSPTIVLMAEQEAEHNA 113
              L ++ G +V +N  + +H    +  +    RD  L LI+S SP +V + EQE+  N 
Sbjct: 343 REHLGLEPGFAVVVNFPYVLHHMPDESVSVENHRDRLLHLIKSLSPKLVTLVEQESNTNT 402

Query: 114 PNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEEM-FAREIRNIVACEGSDRLERHE 172
               +R   +L YY+A+F+SID++   D   RI  E+   AR+I N++ACE S+R+ERHE
Sbjct: 403 SPFLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHCVARDIVNMIACEESERVERHE 462

Query: 173 SFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQPL 232
               WR  M   GF    +S         +LK Y  ++Y++   G +G A+ L W  +P+
Sbjct: 463 VLGIWRVRMMMAGFTGWPVSTSAAFAASEMLKAYD-KNYKLG--GHEG-ALYLFWKRRPM 518

Query: 233 YTVSAWAP 240
            T S W P
Sbjct: 519 ATCSVWKP 526


>AT5G41920.1 | Symbols:  | scarecrow transcription factor family
           protein | chr5:16779982-16781199 FORWARD
          Length = 405

 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 122/242 (50%), Gaps = 19/242 (7%)

Query: 2   LASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHP---VVDRLEDVRLWM 58
           LASR      +RITG G S   L  TG RLA FA +LNLPFEFHP   ++  L D     
Sbjct: 172 LASRPRKLRSIRITGFGSSSDLLASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPS--Q 229

Query: 59  LHVKEGESVAINCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEH-NAPNLE 117
           L  ++GE+V ++    M   LYD  G  L + L ++R   P ++ + EQE  + +  +  
Sbjct: 230 LATRQGEAVVVHW---MQHRLYDVTGNNL-ETLEILRRLKPNLITVVEQELSYDDGGSFL 285

Query: 118 TRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEEM-FAREIRNIVACEGSDRLERHESFEK 176
            R   +L YYSA+FD++   L  +S  R  VE++    EIRNIVA  G  R +R     K
Sbjct: 286 GRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNIVA-HGGGRRKRM----K 340

Query: 177 WRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQPLYTVS 236
           W+  + + GFR + +      Q  +LL M     Y +    ++   + L W D  L T S
Sbjct: 341 WKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLV---EENGTLRLGWKDLSLLTAS 397

Query: 237 AW 238
           AW
Sbjct: 398 AW 399


>AT3G50650.1 | Symbols:  | scarecrow-like transcription factor 7
           (SCL7) | chr3:18806472-18808100 REVERSE
          Length = 542

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 137/251 (54%), Gaps = 15/251 (5%)

Query: 1   SLASRTN-PPSHVRITGI-----GESK-QELNETGDRLAGFAEALNLPFEFHPVVDRLED 53
           +LA+R++  P+ +RI+GI     G+S    L  TG+RL  FA  L+L FEF+PV+  ++ 
Sbjct: 293 ALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQL 352

Query: 54  VRLWMLHVKEGESVAINCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEHNA 113
           +      V   E + +N + ++++ L D     +   L L RS +P IV + E E   N 
Sbjct: 353 LNGSSFRVDPDEVLVVNFMLELYKLL-DETATTVGTALRLARSLNPRIVTLGEYEVSLNR 411

Query: 114 PNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEE-MFAREIRNIVACEGSD-----R 167
                RV NSL++YSA+F+S++ +L  DS  R++VE  +F R I ++V  +  +     R
Sbjct: 412 VEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTR 471

Query: 168 LERHESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSW 227
               E  E+WR LME+ GF  +  S+  + Q ++LL  Y+        + + G  ++L+W
Sbjct: 472 FGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPG-FISLAW 530

Query: 228 LDQPLYTVSAW 238
            + PL TVS+W
Sbjct: 531 NNVPLLTVSSW 541


>AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
           transcription factor | chr2:1720575-1721816 REVERSE
          Length = 413

 Score =  120 bits (302), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 10/242 (4%)

Query: 1   SLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLH 60
           + A+R     ++RITG+G+    L     RL   A+  ++PF F+ V     +V +  L 
Sbjct: 177 AFAARPGGAPNIRITGVGDGSV-LVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENLD 235

Query: 61  VKEGESVAINCIFQMHRTLYDGNGGA--LRD-FLGLIRSTSPTIVLMAEQEAEHNAPNLE 117
           V++GE++ +N  + +H  L D +      RD  L +++S SP +V + EQE   N     
Sbjct: 236 VRDGEALGVNFAYMLHH-LPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFL 294

Query: 118 TRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEE-MFAREIRNIVACEGSDRLERHESFEK 176
            R   +L YY+A+F+SID  L  +   RI +E+   AR++ NI+ACEG++R+ERHE   K
Sbjct: 295 PRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGK 354

Query: 177 WRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQPLYTVS 236
           W++     GF    +S       + LL+ YS   Y + +  +DG A+ L W+D+ L +  
Sbjct: 355 WKSRFSMAGFEPYPLSSIISATIRALLRDYS-NGYAIEE--RDG-ALYLGWMDRILVSSC 410

Query: 237 AW 238
           AW
Sbjct: 411 AW 412


>AT1G07520.1 | Symbols:  | scarecrow transcription factor family
           protein | chr1:2309718-2311805 REVERSE
          Length = 695

 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 130/249 (52%), Gaps = 14/249 (5%)

Query: 4   SRTNPP-SHVRITGIG------ESKQELNETGDRLAGFAEALNLPFEFHPVVDR-LEDVR 55
           S++NP    +RITGI          + + +TG RL  + +   +PFE++ +  +  E ++
Sbjct: 448 SKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIK 507

Query: 56  LWMLHVKEGESVAINCI--FQMHRTLYDGNGGALRD-FLGLIRSTSPTIVLMAEQEAEHN 112
           +    ++  E +A+N +  F+  R +  G     RD FL LIR  +P + L +      N
Sbjct: 508 MEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFN 567

Query: 113 APNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVE-EMFAREIRNIVACEGSDRLERH 171
           AP   TR   +L +YSA+FD   ++L+ ++P RI  E E + RE+ N++ACEG DR+ER 
Sbjct: 568 APFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERP 627

Query: 172 ESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQP 231
           E++++W+  M + GF+   + + E++Q     KM     ++     +D       W  + 
Sbjct: 628 ETYKQWQVRMIRAGFKQKPV-EAELVQL-FREKMKKWGYHKDFVLDEDSNWFLQGWKGRI 685

Query: 232 LYTVSAWAP 240
           L++ S W P
Sbjct: 686 LFSSSCWVP 694


>AT5G59450.1 | Symbols:  | scarecrow-like transcription factor 11
           (SCL11) | chr5:23974808-23976640 FORWARD
          Length = 610

 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 125/256 (48%), Gaps = 20/256 (7%)

Query: 1   SLASRTNPPSHVRITGIG------ESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDV 54
           +L+ R   P  +R+TGI            + ETG RL  F +  N+PFEF+ +  + E +
Sbjct: 352 ALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFIAKKWETI 411

Query: 55  RLWMLHVKEGESVAINCIFQMHRTLYDGNGGALRD-----FLGLIRSTSPTIVLMAEQEA 109
            L  L +  GE+  +NCI   HR  Y  +     D      L L R  +P + + AE   
Sbjct: 412 TLDELMINPGETTVVNCI---HRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEING 468

Query: 110 EHNAPNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKV---EEMFAREIRNIVACEGSD 166
            +N+P   TR   +L +YS++FD  D+++  +   + +     E+  R+  ++++CEG++
Sbjct: 469 MYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAE 528

Query: 167 RLERHESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLS 226
           R  R E++++WR  + + GF+   IS + M + + +++     D+ +     D   +   
Sbjct: 529 RFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRDFVI---DSDNNWMLQG 585

Query: 227 WLDQPLYTVSAWAPVD 242
           W  + +Y  S W P +
Sbjct: 586 WKGRVIYAFSCWKPAE 601


>AT3G46600.1 | Symbols:  | scarecrow transcription factor family
           protein | chr3:17158048-17159799 FORWARD
          Length = 583

 Score =  114 bits (284), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 129/250 (51%), Gaps = 12/250 (4%)

Query: 1   SLASRTNPPSHVRITGIG------ESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDV 54
           +L+ R   P  +R+TGI          + + ETG RL  F +  N+PFE+  +    E++
Sbjct: 335 ALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIAKNWENI 394

Query: 55  RLWMLHVKEGESVAINCIFQMHRTLYDG-NGGALRDF-LGLIRSTSPTIVLMAEQEAEHN 112
            L  L +  GE+  +NCI ++  T  +  +  + RD  L L R  +P + + AE    +N
Sbjct: 395 TLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYN 454

Query: 113 APNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVE-EMFAREIRNIVACEGSDRLERH 171
           +P   TR   +L + S++FD  +++L+ D   R  VE E+  R+  +++ACEGS+R  R 
Sbjct: 455 SPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARP 514

Query: 172 ESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQP 231
           E++++W+  + + GFR   +S + +   + ++K    +D+ +     D   +   W  + 
Sbjct: 515 ETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVI---DNDNHWMFQGWKGRV 571

Query: 232 LYTVSAWAPV 241
           LY VS W P 
Sbjct: 572 LYAVSCWKPA 581


>AT3G46600.2 | Symbols:  | scarecrow transcription factor family
           protein | chr3:17158379-17159799 FORWARD
          Length = 453

 Score =  114 bits (284), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 129/249 (51%), Gaps = 12/249 (4%)

Query: 1   SLASRTNPPSHVRITGIG------ESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDV 54
           +L+ R   P  +R+TGI          + + ETG RL  F +  N+PFE+  +    E++
Sbjct: 205 ALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIAKNWENI 264

Query: 55  RLWMLHVKEGESVAINCIFQMHRTLYDG-NGGALRDF-LGLIRSTSPTIVLMAEQEAEHN 112
            L  L +  GE+  +NCI ++  T  +  +  + RD  L L R  +P + + AE    +N
Sbjct: 265 TLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYN 324

Query: 113 APNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVE-EMFAREIRNIVACEGSDRLERH 171
           +P   TR   +L + S++FD  +++L+ D   R  VE E+  R+  +++ACEGS+R  R 
Sbjct: 325 SPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARP 384

Query: 172 ESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQP 231
           E++++W+  + + GFR   +S + +   + ++K    +D+ +     D   +   W  + 
Sbjct: 385 ETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVI---DNDNHWMFQGWKGRV 441

Query: 232 LYTVSAWAP 240
           LY VS W P
Sbjct: 442 LYAVSCWKP 450


>AT3G46600.3 | Symbols:  | scarecrow transcription factor family
           protein | chr3:17158052-17159799 FORWARD
          Length = 551

 Score =  114 bits (284), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 129/249 (51%), Gaps = 12/249 (4%)

Query: 1   SLASRTNPPSHVRITGIG------ESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDV 54
           +L+ R   P  +R+TGI          + + ETG RL  F +  N+PFE+  +    E++
Sbjct: 303 ALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIAKNWENI 362

Query: 55  RLWMLHVKEGESVAINCIFQMHRTLYDG-NGGALRDF-LGLIRSTSPTIVLMAEQEAEHN 112
            L  L +  GE+  +NCI ++  T  +  +  + RD  L L R  +P + + AE    +N
Sbjct: 363 TLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYN 422

Query: 113 APNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVE-EMFAREIRNIVACEGSDRLERH 171
           +P   TR   +L + S++FD  +++L+ D   R  VE E+  R+  +++ACEGS+R  R 
Sbjct: 423 SPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARP 482

Query: 172 ESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQP 231
           E++++W+  + + GFR   +S + +   + ++K    +D+ +     D   +   W  + 
Sbjct: 483 ETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVI---DNDNHWMFQGWKGRV 539

Query: 232 LYTVSAWAP 240
           LY VS W P
Sbjct: 540 LYAVSCWKP 548


>AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
           transcription factor | chr1:7509721-7511502 FORWARD
          Length = 593

 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 121/237 (51%), Gaps = 14/237 (5%)

Query: 12  VRITGIG--ESKQE----LNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEGE 65
           +R+TGI   ES Q     L   G RL   AE   + F+F  +  +   V    L  K GE
Sbjct: 360 LRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTLGCKPGE 419

Query: 66  SVAINCIFQMHRTLYDGNGGALR---DFLGLIRSTSPTIVLMAEQEAEHNAPNLETRVCN 122
           ++ +N  FQ+H  + D +   +    + L +++S +P +V + EQ+   N      R   
Sbjct: 420 TLIVNFAFQLHH-MPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIE 478

Query: 123 SLKYYSAIFDSIDSSLALDSPVRIKVE-EMFAREIRNIVACEGSDRLERHESFEKWRNLM 181
           + +YYSA+F+S+D +L  +S  R+ VE +  AR+I NIVACEG +R+ER+E+  KWR  M
Sbjct: 479 AYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARM 538

Query: 182 EQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQPLYTVSAW 238
              GF    +S +     Q L+K   C  Y++    ++   +   W ++ L   SAW
Sbjct: 539 MMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLK---EEMGELHFCWEEKSLIVASAW 592


>AT4G37650.1 | Symbols: SHR, SGR7 | SHR (SHORT ROOT); protein
           binding / sequence-specific DNA binding / transcription
           factor | chr4:17691871-17693466 FORWARD
          Length = 531

 Score =  108 bits (270), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 122/261 (46%), Gaps = 24/261 (9%)

Query: 1   SLASRTNPPSHVRITGI----------GESKQELNETGDRLAGFAEALNLPFEFHPV--V 48
           +LA+R++   H+R+T +            S + + E G+R+  FA  + +PF+F+ +  V
Sbjct: 275 ALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHV 334

Query: 49  DRLEDVRLWMLHVKEGESVAINCIFQMHRTLYDGNGGALRD-FLGLIRSTSPTIVLMAEQ 107
             L +  L  L VK  E +AINC+  MH      + G+ RD  +   R   P IV + E+
Sbjct: 335 GDLSEFDLNELDVKPDEVLAINCVGAMHGI---ASRGSPRDAVISSFRRLRPRIVTVVEE 391

Query: 108 EA-----EHNAPNLE--TRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEEMFAREIRNIV 160
           EA     E    + E        L+++   F+S + S    S  R+ +E    R I ++V
Sbjct: 392 EADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLV 451

Query: 161 ACEGSDRLERHESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDG 220
           ACE SD  ER E+  KW   M   GF  +G SD      + LL+ Y  E      Q  D 
Sbjct: 452 ACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYK-EGVWSMVQCPDA 510

Query: 221 AAVTLSWLDQPLYTVSAWAPV 241
           A + L W DQP+   SAW P 
Sbjct: 511 AGIFLCWRDQPVVWASAWRPT 531


>AT2G37650.1 | Symbols:  | scarecrow-like transcription factor 9
           (SCL9) | chr2:15792623-15794779 FORWARD
          Length = 718

 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 14/239 (5%)

Query: 12  VRITGIG------ESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEGE 65
           VRITGI          Q + ETG RLA +A+   +PFE+  +  + + ++L  L +   E
Sbjct: 480 VRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDE 539

Query: 66  SVAINCIFQMHRTLYDGNGG--ALRD-FLGLIRSTSPTIVLMAEQEAEHNAPNLETRVCN 122
              +NC+++    L+D +    + RD  L LI   +P + +       +NAP   TR   
Sbjct: 540 ITVVNCLYRAE-NLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFRE 598

Query: 123 SLKYYSAIFDSIDSSLALDSPVRIKVE-EMFAREIRNIVACEGSDRLERHESFEKWRNLM 181
           +L ++S+IFD +++ +  +   R+ +E E+F RE  N++ACEG +R+ER E++++W    
Sbjct: 599 ALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRA 658

Query: 182 EQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQPLYTVSAWAP 240
            + G   +      M      +  +  +D+ +    QD   +   W  + +  +S W P
Sbjct: 659 MRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVID---QDNRWLLQGWKGRTVMALSVWKP 714


>AT5G52510.1 | Symbols:  | scarecrow-like transcription factor 8
           (SCL8) | chr5:21307196-21309118 FORWARD
          Length = 640

 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 7/221 (3%)

Query: 21  KQELNETGDRLAGFAEALNLPFEFHPVVD-RLEDVRLWMLHVKEGESVAINCIFQMHRTL 79
           ++ L   GD L+   + L +   F+ V   RL D+    L     E++A+N  F+++R  
Sbjct: 423 EERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVP 482

Query: 80  YDG--NGGALRDFLGLIRSTSPTIVLMAEQEAEHNAPNLETRVCNSLKYYSAIFDSIDSS 137
            +         + L  ++   P +V + EQE   N      RV  S   Y A+ +S++S+
Sbjct: 483 DESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVEST 542

Query: 138 LALDSPVRIKVEEMFAREIRNIVACEGSDRLERHESFEKWRNLMEQGGFRCMGISDREML 197
           +   +  R KVEE   R++ N VACEG DR+ER E F KWR  M   GF  M +S++   
Sbjct: 543 VPSTNSDRAKVEEGIGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEK--- 599

Query: 198 QCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQPLYTVSAW 238
                +K      +      +D   V   W+ + L   SAW
Sbjct: 600 -IAESMKSRGNRVHPGFTVKEDNGGVCFGWMGRALTVASAW 639


>AT4G08250.1 | Symbols:  | scarecrow transcription factor family
           protein | chr4:5196787-5198238 FORWARD
          Length = 483

 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 119/253 (47%), Gaps = 23/253 (9%)

Query: 1   SLASRTNPPS--HVRITGIG------ESKQELNETGDRLAGFAEALNLPFEFHPVVDRLE 52
           +L SR   PS  H+RIT +       +S   + ETG RL  FA+++  PF +        
Sbjct: 234 ALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQPFSYQHCKLDTN 293

Query: 53  DVRLWMLHVKEGESVAINCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAE-H 111
                 L +  GE+V INC+  + R  +      +  FL   ++ +P +V +  +E    
Sbjct: 294 AFSTSSLKLVRGEAVVINCMLHLPRFSHQTPSSVI-SFLSEAKTLNPKLVTLVHEEVGLM 352

Query: 112 NAPNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEEMF-----AREIRNIVACEGSD 166
                  R  + L  +SAIFDS+++ L++ +P R  VE +F     A  +  I A +   
Sbjct: 353 GNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFIGPWVANWLTRITANDA-- 410

Query: 167 RLERHESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRVTKQGQDGAAVTLS 226
                ESF  W   +E  GF+ + +S     Q ++LL +++ + +RV + GQ+G  + L 
Sbjct: 411 ---EVESFASWPQWLETNGFKPLEVSFTNRCQAKLLLSLFN-DGFRVEELGQNG--LVLG 464

Query: 227 WLDQPLYTVSAWA 239
           W  + L + S WA
Sbjct: 465 WKSRRLVSASFWA 477


>AT3G49950.1 | Symbols:  | scarecrow transcription factor family
           protein | chr3:18522570-18523802 FORWARD
          Length = 410

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 31/263 (11%)

Query: 1   SLASRTN-PPSHVRITGIGESKQ-------ELNETGDRLAGFAEALNLPFEFHPVVDRLE 52
           ++ASR N PP  +++T +  S            E G +L  FA   N+  EF  V     
Sbjct: 157 AMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITMEFTIVPSTYS 216

Query: 53  D------VRLWMLHVKEGESVAINCIFQMHRTLYD----GNGGALRD-FLGLIRSTSPTI 101
           D       +L +      E++ +NC   M R + +     +  +LR  FL  +RS +P I
Sbjct: 217 DGFSSLLQQLRIYPSSFNEALVVNC-HMMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRI 275

Query: 102 VLMAEQEAEHNAPNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEEMFAREIRNIVA 161
           V + E++ +  + NL  R+ ++  Y+   FD+ D+ +   S  R   E   + +I N+VA
Sbjct: 276 VTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFM---SEQRRWYEAEISWKIENVVA 332

Query: 162 CEGSDRLERHESFEKWRNLMEQGGFRCMGISDREMLQCQMLLKMYSCEDYRV---TKQGQ 218
            EG++R+ER E+  +W   M +  F  + + +  +   + +L     E++ V    K+  
Sbjct: 333 KEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAML-----EEHAVGWGMKKED 387

Query: 219 DGAAVTLSWLDQPLYTVSAWAPV 241
           D  ++ L+W    +   + W P+
Sbjct: 388 DDESLVLTWKGHSVVFATVWVPI 410


>AT2G45160.1 | Symbols:  | scarecrow transcription factor family
           protein | chr2:18618110-18620032 REVERSE
          Length = 640

 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 26/223 (11%)

Query: 23  ELNETGDRLAGFAEALNLPFEFHPV-VDRLEDVRLWMLHVKEGESVAINCIFQMHRTLYD 81
           EL  T + L  FA  + +PFE   + V+ L +   W L ++  E  AI     ++     
Sbjct: 435 ELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVNLPVNSVA-- 492

Query: 82  GNGGALRDFLGLIRSTSPTIVLMAEQEAEHNAPNLETRVCNSLKYYSAIFDSIDSSLALD 141
              G L   L  ++  SP IV+ +++  + N       V +SL+Y++++ +S+D++   D
Sbjct: 493 --SGYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDANQNQD 550

Query: 142 SP------VRIKVEEMFAREIRNIVACEGSDRLERHESFEKWRNLMEQGGFRCMGISDRE 195
                   V+  +E++  +  R I            E    WR L  Q GF    +S   
Sbjct: 551 DSSIERFWVQPSIEKLLMKRHRWI------------ERSPPWRILFTQCGFSPASLSQMA 598

Query: 196 MLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQPLYTVSAW 238
             Q + LL+      + V K+    +++ + W  + L TVSAW
Sbjct: 599 EAQAECLLQRNPVRGFHVEKR---QSSLVMCWQRKELVTVSAW 638


>AT3G60630.1 | Symbols:  | scarecrow transcription factor family
           protein | chr3:22410496-22412367 REVERSE
          Length = 623

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 18/223 (8%)

Query: 23  ELNETGDRLAGFAEALNLPFEFHPV-VDRLEDVRLWMLHV---KEGESVAINCIFQMHRT 78
           EL  T + L  FA    + FE   + ++ L +   W L +    E E++A+N       +
Sbjct: 410 ELRFTEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVNLPISSMVS 469

Query: 79  LYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEHN--APNLETRVCNSLKYYSAIFDSIDS 136
                 G L   L  ++  SP +V+ +++  + N  AP     V N+L+YY+++ +S+DS
Sbjct: 470 ------GYLPLILRFLKQISPNVVVCSDRSCDRNNDAP-FPNGVINALQYYTSLLESLDS 522

Query: 137 SLALDSPVRIKVEEMFAR-EIRNIVACEGSDRLERHESFEKWRNLMEQGGFRCMGISDRE 195
               ++     +E    +  I+ ++    ++R    E    WR+L  Q GF  + +S   
Sbjct: 523 GNLNNAEAATSIERFCVQPSIQKLL----TNRYRWMERSPPWRSLFGQCGFTPVTLSQTA 578

Query: 196 MLQCQMLLKMYSCEDYRVTKQGQDGAAVTLSWLDQPLYTVSAW 238
             Q + LL+      + + K+     ++ L W  + L TVSAW
Sbjct: 579 ETQAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAW 621


>AT4G36710.1 | Symbols:  | transcription factor |
           chr4:17306060-17307520 FORWARD
          Length = 486

 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 18/234 (7%)

Query: 12  VRITGI--GESKQELNETGDRLAGFAEALNLPFEFHPVVDR-LEDVRLWMLHVKEGESVA 68
           +R+T +   E   E     + L  FA  + + F+   V+ +  E +    +   EGE   
Sbjct: 262 LRVTAVVAEECAVETRLVKENLTQFAAEMKIRFQIEFVLMKTFEMLSFKAIRFVEGERTV 321

Query: 69  INCIFQMHRTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEA---EHNAPNLETRVCNSLK 125
           +     + R L       + DF+  +R  SP +V+  + E       + +      ++L+
Sbjct: 322 VLISPAIFRRL-----SGITDFVNNLRRVSPKVVVFVDSEGWTEIAGSGSFRREFVSALE 376

Query: 126 YYSAIFDSIDSSLALDSPVRIKVEEMFAREIRNIVACEGSDRLERHESFEKWRNLMEQGG 185
           +Y+ + +S+D++      V+  VE    R   +      +DR  RH     WR      G
Sbjct: 377 FYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVETAADR--RHTGEMTWREAFCAAG 434

Query: 186 FRCMGISDREMLQCQMLLKMYSCEDYRVTK-QGQDGAAVTLSWLDQPLYTVSAW 238
            R + +S     Q + LL+      + V K QG+    + L W  + L   SAW
Sbjct: 435 MRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGE----LVLCWHGRALVATSAW 484


>AT5G67411.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; CONTAINS InterPro DOMAIN/s:
           GRAS transcription factor (InterPro:IPR005202); BEST
           Arabidopsis thaliana protein match is: scarecrow
           transcription factor family protein (TAIR:AT3G49950.1);
           Has 808 Blast hits to 802 proteins in 141 species:
           Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants
           - 806; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
           BLink). | chr5:26898401-26899097 REVERSE
          Length = 202

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 20/183 (10%)

Query: 8   PPSHVRITGIGESKQ---------ELNETGDRLAGFAEALNLPFEFHPVVDR-------- 50
           PP  +++T I    +            E G +L  FA   N+  EF  +           
Sbjct: 18  PPPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVAMEFRIISSSYSDGLSSL 77

Query: 51  LEDVRLWMLHVKEGESVAINCIFQMHRTLYDGNGGALRD-FLGLIRSTSPTIVLMAEQEA 109
           +E +R+        E++ +NC   +H    +     LR  FL  +R  +PTIV + ++++
Sbjct: 78  IEQLRIDPFVF--NEALVVNCHMMLHYIPDEILTSNLRSVFLKELRDLNPTIVTLIDEDS 135

Query: 110 EHNAPNLETRVCNSLKYYSAIFDSIDSSLALDSPVRIKVEEMFAREIRNIVACEGSDRLE 169
           +  + N  +R+ +   Y    +D+ +  L   S  R   E   + +I N+VA EG++R+E
Sbjct: 136 DFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADISWKIDNVVAKEGAERVE 195

Query: 170 RHE 172
           R E
Sbjct: 196 RLE 198