Jatropha Genome Database
- JcCA0257171.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0257171.20 - phase: 0 /pseudo/partial
(239 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G27670.1 | Symbols: HSP21 | HSP21 (HEAT SHOCK PROTEIN 21) | c... 111 4e-25
AT1G52560.1 | Symbols: | 26.5 kDa class I small heat shock prot... 74 1e-13
AT1G52560.2 | Symbols: | 26.5 kDa class I small heat shock prot... 73 1e-13
AT1G07400.1 | Symbols: | 17.8 kDa class I heat shock protein (H... 62 4e-10
AT1G59860.1 | Symbols: | 17.6 kDa class I heat shock protein (H... 59 2e-09
AT1G53540.1 | Symbols: | 17.6 kDa class I small heat shock prot... 59 3e-09
AT4G25200.1 | Symbols: ATHSP23.6-MITO | ATHSP23.6-MITO (MITOCHON... 58 4e-09
AT5G51440.1 | Symbols: | 23.5 kDa mitochondrial small heat shoc... 55 3e-08
AT4G10250.1 | Symbols: ATHSP22.0 | ATHSP22.0 | chr4:6370537-6371... 53 2e-07
AT5G37670.1 | Symbols: | 15.7 kDa class I-related small heat sh... 52 3e-07
AT2G29500.1 | Symbols: | 17.6 kDa class I small heat shock prot... 50 1e-06
AT5G59720.1 | Symbols: HSP18.2 | HSP18.2 (heat shock protein 18.... 47 9e-06
>AT4G27670.1 | Symbols: HSP21 | HSP21 (HEAT SHOCK PROTEIN 21) |
chr4:13819048-13819895 REVERSE
Length = 227
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 13/159 (8%)
Query: 83 VAPVGLWDRFPTARTVQQXXXXXXXXXXDPFAYTATWPSEPPSPVER--SGYSRGRTPWE 140
V+P GL D RT++Q D P S R SG S R PW+
Sbjct: 80 VSPFGLLDPLSPMRTMRQMLDTMDRMFEDTM---------PVSGRNRGGSGVSEIRAPWD 130
Query: 141 IKEGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEEEEEGGWSAKSYGKYSCRI 200
IKE E E KMRFDMPG++KEDVK + G Q +E+ + WS +S Y R+
Sbjct: 131 IKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQK--KEDSDDSWSGRSVSSYGTRL 188
Query: 201 ALPENIQFEKIKAEVKDGVLYITIPKASTTGKILDINVQ 239
LP+N + +KIKAE+K+GVL+ITIPK K++D+ +Q
Sbjct: 189 QLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227
>AT1G52560.1 | Symbols: | 26.5 kDa class I small heat shock
protein-like (HSP26.5-P) | chr1:19574783-19575766
REVERSE
Length = 232
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 140 EIKEGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEE----EEEGGWSAKSYGK 195
++KE + YK+R+++PG+TKEDVK + G EE EE+ WS+KSYG
Sbjct: 128 QVKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEYWSSKSYGY 187
Query: 196 YSCRIALPENIQFEKIKAEVKDGVLYITIPKA 227
Y+ ++LP++ + E IKAE+K+GVL + IP+
Sbjct: 188 YNTSLSLPDDAKVEDIKAELKNGVLNLVIPRT 219
>AT1G52560.2 | Symbols: | 26.5 kDa class I small heat shock
protein-like (HSP26.5-P) | chr1:19574783-19575766
REVERSE
Length = 225
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 140 EIKEGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEE----EEEGGWSAKSYGK 195
++KE + YK+R+++PG+TKEDVK + G EE EE+ WS+KSYG
Sbjct: 121 QVKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEYWSSKSYGY 180
Query: 196 YSCRIALPENIQFEKIKAEVKDGVLYITIPKA 227
Y+ ++LP++ + E IKAE+K+GVL + IP+
Sbjct: 181 YNTSLSLPDDAKVEDIKAELKNGVLNLVIPRT 212
>AT1G07400.1 | Symbols: | 17.8 kDa class I heat shock protein
(HSP17.8-CI) | chr1:2275148-2275621 FORWARD
Length = 157
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 111 DPFAYTATWPSEP---PSPV--ERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAE 165
DPF+ P + PS + E S + R W KE + + D+PGM KE+VK E
Sbjct: 19 DPFSLDVWDPFKELQFPSSLSGETSAITNARVDW--KETAEAHVFKADLPGMKKEEVKVE 76
Query: 166 KVPEKN-NVNGAQNGIEEEEEGGWS--AKSYGKYSCRIALPENIQFEKIKAEVKDGVLYI 222
+ ++G ++ +EE++ W +S G++S + LPEN++ +++KA +++GVL +
Sbjct: 77 IEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTV 136
Query: 223 TIPKASTTGK 232
T+PK K
Sbjct: 137 TVPKVEEAKK 146
>AT1G59860.1 | Symbols: | 17.6 kDa class I heat shock protein
(HSP17.6A-CI) | chr1:22031474-22031941 FORWARD
Length = 155
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 131 GYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKN-NVNGAQNGIEEEEEGGWS 189
+ R W KE + + D+PGM KE+VK E + ++G ++ +EE++ W
Sbjct: 42 AIANARVDW--KETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWH 99
Query: 190 --AKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPKASTTGK 232
+S G +S + LPEN++ +++KA +++GVL +T+PK T K
Sbjct: 100 RVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKK 144
>AT1G53540.1 | Symbols: | 17.6 kDa class I small heat shock protein
(HSP17.6C-CI) (AA 1-156) | chr1:19980510-19980983
FORWARD
Length = 157
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Query: 111 DPFAYTATWPSEPPSP-VERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPE 169
DPF T +P ++ + ++ + W +E + + D+PG+ KE+VK E V +
Sbjct: 25 DPFEGFLTPSGLANAPAMDVAAFTNAKVDW--RETPEAHVFKADLPGLRKEEVKVE-VED 81
Query: 170 KN--NVNGAQNGIEEEEEGGWS--AKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIP 225
N ++G ++ EE+ W +S GK++ R LPEN + E+IKA +++GVL +T+P
Sbjct: 82 GNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVP 141
Query: 226 KA 227
K
Sbjct: 142 KV 143
>AT4G25200.1 | Symbols: ATHSP23.6-MITO | ATHSP23.6-MITO
(MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)
| chr4:12917089-12917858 FORWARD
Length = 210
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 88 LWDRFPTARTVQQXXXXXXXXXXDPFAYTATWPSEPPSPVERSGYSRGRTPWEIKEGETE 147
++D F R+V Q +P S G S R W+IKE +
Sbjct: 68 VFDPFSPTRSVSQVLNLMDQFMENPLL----------SATRGMGASGARRGWDIKEKDDA 117
Query: 148 YKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEEEEEGGWSAKSYGKYSCRIALPENI- 206
+R DMPG+++EDVK E++ + G EE+ G +++ RI LP+ I
Sbjct: 118 LYLRIDMPGLSREDVKL--ALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIY 175
Query: 207 QFEKIKAEVKDGVLYITIPK 226
+ ++IKAE+K+GVL + IPK
Sbjct: 176 KIDEIKAEMKNGVLKVVIPK 195
>AT5G51440.1 | Symbols: | 23.5 kDa mitochondrial small heat shock
protein (HSP23.5-M) | chr5:20891242-20892013 FORWARD
Length = 210
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 14/101 (13%)
Query: 130 SGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEEEEEGGWS 189
SG RG W +KE + +R DMPG+++EDVK E+N + I E E
Sbjct: 105 SGVRRG---WNVKEKDDALHLRIDMPGLSREDVKL--ALEQNTL-----VIRGEGETEEG 154
Query: 190 AKSYG---KYSCRIALPENI-QFEKIKAEVKDGVLYITIPK 226
G +++ RI LPE + + ++IKAE+K+GVL + IPK
Sbjct: 155 EDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPK 195
>AT4G10250.1 | Symbols: ATHSP22.0 | ATHSP22.0 | chr4:6370537-6371124
FORWARD
Length = 195
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 34/150 (22%)
Query: 88 LW-DRFPTARTVQQXXXXXXXXXXDPFAYTATWPSEPPSPVERS---GYSRGRTPWEIKE 143
LW DRFP DPF P +ER S R W KE
Sbjct: 41 LWLDRFP-----------------DPFKIL----ERIPLGLERDTSVALSPARVDW--KE 77
Query: 144 GETEYKMRFDMPGMTKEDVKAEKVPEKNNV---NGAQNGIEEEEEGGWS--AKSYGKYSC 198
+++ D+PG+ K++VK E E+N V +G + EE++ W +SYGK+
Sbjct: 78 TAEGHEIMLDIPGLKKDEVKIE--VEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWR 135
Query: 199 RIALPENIQFEKIKAEVKDGVLYITIPKAS 228
+ LP+N+ E +KA++++GVL I + K S
Sbjct: 136 QFKLPDNVDMESVKAKLENGVLTINLTKLS 165
>AT5G37670.1 | Symbols: | 15.7 kDa class I-related small heat shock
protein-like (HSP15.7-CI) | chr5:14969035-14969448
FORWARD
Length = 137
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 12/118 (10%)
Query: 132 YSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEEE--EEGGWS 189
+SR + E + + ++PG KED+K + + E N ++ GI+EE E W
Sbjct: 17 WSRSTALIDWMESNNSHIFKINVPGYNKEDIKVQ-IEEGNVLSIRGEGIKEEKKENLVWH 75
Query: 190 AKSYGKYSC-------RIALPENIQFEKIKAEVKDGVLYITIPK--ASTTGKILDINV 238
+S RI LPEN++ +++KA V++GVL + +PK +S + K+ ++N+
Sbjct: 76 VAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTSSKSSKVRNVNI 133
>AT2G29500.1 | Symbols: | 17.6 kDa class I small heat shock protein
(HSP17.6B-CI) | chr2:12633279-12633740 REVERSE
Length = 153
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 128 ERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKN-NVNGAQNGIEEEEEG 186
E S R W +E + + D+PG+ KE+VK E + ++G ++ +E++
Sbjct: 39 ENSAIVNARVDW--RETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKND 96
Query: 187 GWS--AKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPKAST 229
W +S G+++ R LPEN++ +++KA +++GVL +T+PKA T
Sbjct: 97 TWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAET 141
>AT5G59720.1 | Symbols: HSP18.2 | HSP18.2 (heat shock protein 18.2)
| chr5:24062632-24063117 FORWARD
Length = 161
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 130 SGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKN--NVNGAQNGIEEEEEGG 187
+ ++ R W KE + + D+PG+ KE+VK E +KN ++G ++ EE+
Sbjct: 47 AAFTNARVDW--KETPEAHVFKADLPGLKKEEVKVEVE-DKNVLQISGERSKENEEKNDK 103
Query: 188 WS--AKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPKA 227
W ++ GK+ R LPEN + E++KA +++GVL + +PKA
Sbjct: 104 WHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKA 145