Jatropha Genome Database

JcCA0254771.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0254771.20 + phase: 0 
         (99 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75750.1 | Symbols: GASA1 | GASA1 (GAST1 PROTEIN HOMOLOG 1) |...   110   1e-25
AT2G18420.1 | Symbols:  | Encodes a Gibberellin-regulated GASA/G...   107   2e-24
AT1G22690.1 | Symbols:  | gibberellin-responsive protein, putati...    97   3e-21
AT4G09600.1 | Symbols: GASA3 | GASA3 (GAST1 PROTEIN HOMOLOG 3) |...    92   6e-20
AT4G09610.1 | Symbols: GASA2 | GASA2 (GAST1 PROTEIN HOMOLOG 2) |...    76   4e-15
AT1G74670.1 | Symbols:  | gibberellin-responsive protein, putati...    76   5e-15
AT5G14920.1 | Symbols:  | gibberellin-regulated family protein |...    73   3e-14
AT5G59845.1 | Symbols:  | gibberellin-regulated family protein |...    65   1e-11
AT1G10588.2 | Symbols:  | Encodes a Gibberellin-regulated GASA/G...    63   4e-11
AT1G10588.1 | Symbols:  | Encodes a Gibberellin-regulated GASA/G...    63   4e-11
AT2G39540.1 | Symbols:  | gibberellin-regulated family protein |...    61   1e-10
AT5G15230.1 | Symbols: GASA4 | GASA4 (GAST1 PROTEIN HOMOLOG 4) |...    61   1e-10
AT2G14900.1 | Symbols:  | gibberellin-regulated family protein |...    54   1e-08
AT5G15230.2 | Symbols: GASA4 | GASA4 (GAST1 PROTEIN HOMOLOG 4) |...    54   2e-08
AT3G10185.1 | Symbols:  | Encodes a Gibberellin-regulated GASA/G...    49   6e-07
AT2G30810.1 | Symbols:  | gibberellin-regulated family protein |...    48   1e-06
AT3G02885.1 | Symbols: GASA5 | GASA5 (GAST1 PROTEIN HOMOLOG 5) |...    47   3e-06

>AT1G75750.1 | Symbols: GASA1 | GASA1 (GAST1 PROTEIN HOMOLOG 1) |
          chr1:28441813-28442284 REVERSE
          Length = 98

 Score =  110 bits (276), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/99 (69%), Positives = 75/99 (75%), Gaps = 1/99 (1%)

Query: 1  MVISKFLLASLFISLFVLQLAKATQTENTNLNASPIPKIDCGSACSNRCRLASRQRLCHR 60
          M ISK L+ASL ISL VLQL +A   EN+        KIDCGSAC  RCRL+ R RLCHR
Sbjct: 1  MAISKALIASLLISLLVLQLVQA-DVENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHR 59

Query: 61 ACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
          ACGTCC RCNCVPPGT GN++ C CYASLTTHGGRRKCP
Sbjct: 60 ACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98


>AT2G18420.1 | Symbols:  | Encodes a Gibberellin-regulated
          GASA/GAST/Snakin family protein | chr2:7993861-7994334
          FORWARD
          Length = 94

 Score =  107 bits (266), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 56/69 (81%)

Query: 31 LNASPIPKIDCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVCPCYASLT 90
          + ++  PKIDC S C  RC L+SR  LCHRACGTCCARCNCV PGTSGN++ CPCY SLT
Sbjct: 26 VTSNDAPKIDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLT 85

Query: 91 THGGRRKCP 99
          THGGRRKCP
Sbjct: 86 THGGRRKCP 94


>AT1G22690.1 | Symbols:  | gibberellin-responsive protein, putative
           | chr1:8027328-8027961 FORWARD
          Length = 119

 Score = 96.7 bits (239), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 9/108 (8%)

Query: 1   MVISKFLLASLFISLFVLQLAKAT---QTENTNLNAS------PIPKIDCGSACSNRCRL 51
           ++IS  LL+ +   L      + +   QT + N  A+        P+I+CG AC+ RC  
Sbjct: 12  LIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCSK 71

Query: 52  ASRQRLCHRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
            SR+++CHRACG+CCA+C CVPPGTSGN   CPCYAS+ THG + KCP
Sbjct: 72  TSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119


>AT4G09600.1 | Symbols: GASA3 | GASA3 (GAST1 PROTEIN HOMOLOG 3) |
          chr4:6073014-6073516 REVERSE
          Length = 99

 Score = 92.0 bits (227), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 56/86 (65%), Gaps = 4/86 (4%)

Query: 14 SLFVLQLAKATQTENTNLNASPIPKIDCGSACSNRCRLASRQRLCHRACGTCCARCNCVP 73
          + F L +  A  ++        + KIDCG  C  RC  +SR  LC RAC +CC RCNCVP
Sbjct: 18 TTFELHVHAAEDSQV----GEGVVKIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVP 73

Query: 74 PGTSGNHEVCPCYASLTTHGGRRKCP 99
          PGT+GNH +CPCYAS+TT GGR KCP
Sbjct: 74 PGTAGNHHLCPCYASITTRGGRLKCP 99


>AT4G09610.1 | Symbols: GASA2 | GASA2 (GAST1 PROTEIN HOMOLOG 2) |
          chr4:6074927-6075573 REVERSE
          Length = 99

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query: 36 IPKIDCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGR 95
          + KIDCG  C +RC  +SR +LC RAC +CC+RCNCVPPGTSGN  +CPCYAS+TTHGGR
Sbjct: 36 VVKIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGR 95

Query: 96 RKCP 99
           KCP
Sbjct: 96 LKCP 99


>AT1G74670.1 | Symbols:  | gibberellin-responsive protein, putative
           | chr1:28053378-28053893 FORWARD
          Length = 101

 Score = 75.9 bits (185), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%)

Query: 2   VISKFLLASLFISLFVLQLAKATQTENTNLNASPIPKIDCGSACSNRCRLASRQRLCHRA 61
           +I+ FLL ++  +   L ++K  +    +     +    CG  C+ RC      + C   
Sbjct: 4   LITSFLLLTILFTFVCLTMSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKPCMFF 63

Query: 62  CGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
           C  CCA+C CVPPGT GN +VCPCY +  T  G  KCP
Sbjct: 64  CQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101


>AT5G14920.1 | Symbols:  | gibberellin-regulated family protein |
           chr5:4826598-4827761 FORWARD
          Length = 275

 Score = 73.2 bits (178), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 38  KIDCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVC-PCYASLTTHGGRR 96
           +IDC   C  RC   SR+ +C RAC TCC RC CVPPGT GN E C  CYA++ T GG+ 
Sbjct: 213 RIDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKS 272

Query: 97  KCP 99
           KCP
Sbjct: 273 KCP 275


>AT5G59845.1 | Symbols:  | gibberellin-regulated family protein |
          chr5:24111443-24111808 FORWARD
          Length = 89

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 50/98 (51%), Gaps = 18/98 (18%)

Query: 5  KFLLASLFI--SLFVLQLAKATQTENTNLNASPIPKIDCGSACSNRCRLASRQRLCHRAC 62
          K L+ SL I  SLF+L  A          ++SP     CG  C+ RC  A RQ  C + C
Sbjct: 7  KVLIISLLITSSLFILSTA----------DSSP-----CGGKCNVRCSKAGRQDRCLKYC 51

Query: 63 GTCCARCN-CVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
            CC +CN CVP GT GN + CPCY  +    G  KCP
Sbjct: 52 NICCEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89


>AT1G10588.2 | Symbols:  | Encodes a Gibberellin-regulated
          GASA/GAST/Snakin family protein | chr1:3501276-3501655
          FORWARD
          Length = 89

 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 47/101 (46%), Gaps = 19/101 (18%)

Query: 2  VISKFLLASLFI--SLFVLQLAKATQTENTNLNASPIPKIDCGSACSNRCRLASR-QRLC 58
          V+ +F + SL +  S +VL  A ++                CG  CS RC  A R    C
Sbjct: 5  VVVQFFIISLLLTSSFYVLSSADSS----------------CGGKCSVRCSKADRTHEEC 48

Query: 59 HRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
             C  CC +CNCVP GT GN + CPCY  +    G  KCP
Sbjct: 49 LEDCDICCQKCNCVPSGTYGNKDECPCYRDMKNSKGGSKCP 89


>AT1G10588.1 | Symbols:  | Encodes a Gibberellin-regulated
          GASA/GAST/Snakin family protein | chr1:3501276-3501655
          FORWARD
          Length = 90

 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 47/101 (46%), Gaps = 18/101 (17%)

Query: 2  VISKFLLASLFI--SLFVLQLAKATQTENTNLNASPIPKIDCGSACSNRCRLASR-QRLC 58
          V+ +F + SL +  S +VL  A ++                CG  CS RC  A R    C
Sbjct: 5  VVVQFFIISLLLTSSFYVLSSADSSA---------------CGGKCSVRCSKADRTHEEC 49

Query: 59 HRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
             C  CC +CNCVP GT GN + CPCY  +    G  KCP
Sbjct: 50 LEDCDICCQKCNCVPSGTYGNKDECPCYRDMKNSKGGSKCP 90


>AT2G39540.1 | Symbols:  | gibberellin-regulated family protein |
          chr2:16500866-16501241 FORWARD
          Length = 87

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 14/99 (14%)

Query: 1  MVISKFLLASLFISLFVLQLAKATQTENTNLNASPIPKIDCGSACSNRCRLASRQRLCHR 60
          +V+ +F + SL ++     L+ A  +              CG  C+ RC  A +   C +
Sbjct: 3  LVVVQFFIISLLLTSSFSVLSSADSS--------------CGGKCNVRCSKAGQHEECLK 48

Query: 61 ACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
           C  CC +CNCVP GT G+ + CPCY  +    G  KCP
Sbjct: 49 YCNICCQKCNCVPSGTFGHKDECPCYRDMKNSKGGSKCP 87


>AT5G15230.1 | Symbols: GASA4 | GASA4 (GAST1 PROTEIN HOMOLOG 4) |
           chr5:4945017-4946025 FORWARD
          Length = 106

 Score = 60.8 bits (146), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 8/100 (8%)

Query: 6   FLLASLFISLFVLQ-LAKATQTENTNLNAS-----PIPKIDCGSACSNRCRLASRQRLCH 59
           FLL    I LF+LQ +  A+   N   +        + +  C S C  RC+     + C 
Sbjct: 9   FLLT--LIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACI 66

Query: 60  RACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
             C  CC +C CVPPG  GN +VC CY +  T  G  KCP
Sbjct: 67  TFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106


>AT2G14900.1 | Symbols:  | gibberellin-regulated family protein |
           chr2:6404210-6405043 FORWARD
          Length = 108

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 30/59 (50%)

Query: 41  CGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
           CG  C  RC+ A  +  C + CG CC  C CVP GT GN   C CY    +  G  KCP
Sbjct: 50  CGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108


>AT5G15230.2 | Symbols: GASA4 | GASA4 (GAST1 PROTEIN HOMOLOG 4) |
          chr5:4945286-4946025 FORWARD
          Length = 83

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 33/64 (51%)

Query: 36 IPKIDCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGR 95
          + +  C S C  RC+     + C   C  CC +C CVPPG  GN +VC CY +  T  G 
Sbjct: 20 LKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGG 79

Query: 96 RKCP 99
           KCP
Sbjct: 80 PKCP 83


>AT3G10185.1 | Symbols:  | Encodes a Gibberellin-regulated
           GASA/GAST/Snakin family protein | chr3:3145579-3146199
           FORWARD
          Length = 103

 Score = 48.9 bits (115), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 37  PKIDCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRR 96
           P ++CG  C +RC     ++ C   C  CC +C CVPPGT GN +VCPCY +  T  G  
Sbjct: 41  PLLECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGP 100

Query: 97  KCP 99
           KCP
Sbjct: 101 KCP 103


>AT2G30810.1 | Symbols:  | gibberellin-regulated family protein |
           chr2:13127945-13128630 REVERSE
          Length = 106

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 47/99 (47%)

Query: 1   MVISKFLLASLFISLFVLQLAKATQTENTNLNASPIPKIDCGSACSNRCRLASRQRLCHR 60
            VIS  L A+ F +   L+        + N     +   +C  AC  RC   S ++ C  
Sbjct: 8   FVISSLLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHRKPCLF 67

Query: 61  ACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
            C  CC +C CVP GT G+ E CPCY + TT  G  KCP
Sbjct: 68  FCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106


>AT3G02885.1 | Symbols: GASA5 | GASA5 (GAST1 PROTEIN HOMOLOG 5) |
          chr3:638323-639011 REVERSE
          Length = 97

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 35/60 (58%)

Query: 40 DCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
           C S CS RC   S ++ C   C  CC +C CVPPGT GN + CPCY +  T  GR KCP
Sbjct: 38 QCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 97