Jatropha Genome Database

JcCA0254771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0254771.10 + phase: 0 
         (103 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75750.1 | Symbols: GASA1 | GASA1 (GAST1 PROTEIN HOMOLOG 1) |...   109   3e-25
AT2G18420.1 | Symbols:  | Encodes a Gibberellin-regulated GASA/G...   107   2e-24
AT4G09600.1 | Symbols: GASA3 | GASA3 (GAST1 PROTEIN HOMOLOG 3) |...    94   2e-20
AT1G22690.1 | Symbols:  | gibberellin-responsive protein, putati...    87   3e-18
AT5G14920.1 | Symbols:  | gibberellin-regulated family protein |...    74   2e-14
AT4G09610.1 | Symbols: GASA2 | GASA2 (GAST1 PROTEIN HOMOLOG 2) |...    72   8e-14
AT1G74670.1 | Symbols:  | gibberellin-responsive protein, putati...    59   7e-10
AT2G14900.1 | Symbols:  | gibberellin-regulated family protein |...    55   6e-09
AT5G59845.1 | Symbols:  | gibberellin-regulated family protein |...    55   1e-08
AT1G10588.1 | Symbols:  | Encodes a Gibberellin-regulated GASA/G...    54   2e-08
AT2G39540.1 | Symbols:  | gibberellin-regulated family protein |...    54   2e-08
AT1G10588.2 | Symbols:  | Encodes a Gibberellin-regulated GASA/G...    53   3e-08
AT5G15230.1 | Symbols: GASA4 | GASA4 (GAST1 PROTEIN HOMOLOG 4) |...    50   4e-07
AT5G15230.2 | Symbols: GASA4 | GASA4 (GAST1 PROTEIN HOMOLOG 4) |...    49   8e-07

>AT1G75750.1 | Symbols: GASA1 | GASA1 (GAST1 PROTEIN HOMOLOG 1) |
           chr1:28441813-28442284 REVERSE
          Length = 98

 Score =  109 bits (273), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/81 (67%), Positives = 62/81 (76%), Gaps = 4/81 (4%)

Query: 23  EADHQTVKSKLDATNSPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAG 82
           +AD +  + K    N  A++IDCGSAC ARC+LS RP LC RACGTCC RC CVPPGT G
Sbjct: 22  QADVENSQKK----NGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYG 77

Query: 83  NYEACPCYASLTTHGGRRKCP 103
           NY+ C CYASLTTHGGRRKCP
Sbjct: 78  NYDKCQCYASLTTHGGRRKCP 98


>AT2G18420.1 | Symbols:  | Encodes a Gibberellin-regulated
           GASA/GAST/Snakin family protein | chr2:7993861-7994334
           FORWARD
          Length = 94

 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 56/69 (81%)

Query: 35  ATNSPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLT 94
            T++ A +IDC S C  RC LSSRPNLC RACGTCCARC CV PGT+GNY+ CPCY SLT
Sbjct: 26  VTSNDAPKIDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLT 85

Query: 95  THGGRRKCP 103
           THGGRRKCP
Sbjct: 86  THGGRRKCP 94


>AT4G09600.1 | Symbols: GASA3 | GASA3 (GAST1 PROTEIN HOMOLOG 3) |
           chr4:6073014-6073516 REVERSE
          Length = 99

 Score = 93.6 bits (231), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/62 (70%), Positives = 48/62 (77%)

Query: 42  EIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRK 101
           +IDCG  C  RC  SSRPNLC RAC +CC RC CVPPGTAGN+  CPCYAS+TT GGR K
Sbjct: 38  KIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLK 97

Query: 102 CP 103
           CP
Sbjct: 98  CP 99


>AT1G22690.1 | Symbols:  | gibberellin-responsive protein, putative
           | chr1:8027328-8027961 FORWARD
          Length = 119

 Score = 86.7 bits (213), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 2/79 (2%)

Query: 25  DHQTVKSKLDATNSPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNY 84
           ++QT   K    + P   I+CG AC  RC  +SR  +C RACG+CCA+C+CVPPGT+GN 
Sbjct: 43  ENQTAAFKRTYHHRP--RINCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNT 100

Query: 85  EACPCYASLTTHGGRRKCP 103
            +CPCYAS+ THG + KCP
Sbjct: 101 ASCPCYASIRTHGNKLKCP 119


>AT5G14920.1 | Symbols:  | gibberellin-regulated family protein |
           chr5:4826598-4827761 FORWARD
          Length = 275

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 42  EIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEAC-PCYASLTTHGGRR 100
            IDC   C  RC   SR N+C RAC TCC RCKCVPPGT GN E C  CYA++ T GG+ 
Sbjct: 213 RIDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKS 272

Query: 101 KCP 103
           KCP
Sbjct: 273 KCP 275


>AT4G09610.1 | Symbols: GASA2 | GASA2 (GAST1 PROTEIN HOMOLOG 2) |
           chr4:6074927-6075573 REVERSE
          Length = 99

 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 47/62 (75%)

Query: 42  EIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRK 101
           +IDCG  C  RC  SSR  LC RAC +CC+RC CVPPGT+GN   CPCYAS+TTHGGR K
Sbjct: 38  KIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLK 97

Query: 102 CP 103
           CP
Sbjct: 98  CP 99


>AT1G74670.1 | Symbols:  | gibberellin-responsive protein, putative
           | chr1:28053378-28053893 FORWARD
          Length = 101

 Score = 58.5 bits (140), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 34/63 (53%)

Query: 41  EEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRR 100
           +   CG  CT RC  +     C   C  CCA+C CVPPGT GN + CPCY +  T  G  
Sbjct: 39  KSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGP 98

Query: 101 KCP 103
           KCP
Sbjct: 99  KCP 101


>AT2G14900.1 | Symbols:  | gibberellin-regulated family protein |
           chr2:6404210-6405043 FORWARD
          Length = 108

 Score = 55.5 bits (132), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 36/69 (52%)

Query: 35  ATNSPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLT 94
           + + PA E  CG  C  RC+ +   + C + CG CC  C+CVP GT GN   C CY    
Sbjct: 40  SKDGPALEKWCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKL 99

Query: 95  THGGRRKCP 103
           +  G  KCP
Sbjct: 100 SSKGTPKCP 108


>AT5G59845.1 | Symbols:  | gibberellin-regulated family protein |
           chr5:24111443-24111808 FORWARD
          Length = 89

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 38  SPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCK-CVPPGTAGNYEACPCYASLTTH 96
           S A+   CG  C  RC  + R + C + C  CC +C  CVP GT GN + CPCY  +   
Sbjct: 23  STADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDECPCYRDMKNS 82

Query: 97  GGRRKCP 103
            G  KCP
Sbjct: 83  KGTSKCP 89


>AT1G10588.1 | Symbols:  | Encodes a Gibberellin-regulated
           GASA/GAST/Snakin family protein | chr1:3501276-3501655
           FORWARD
          Length = 90

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 38  SPAEEIDCGSACTARCQLSSRPNL-CKRACGTCCARCKCVPPGTAGNYEACPCYASLTTH 96
           S A+   CG  C+ RC  + R +  C   C  CC +C CVP GT GN + CPCY  +   
Sbjct: 24  SSADSSACGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDECPCYRDMKNS 83

Query: 97  GGRRKCP 103
            G  KCP
Sbjct: 84  KGGSKCP 90


>AT2G39540.1 | Symbols:  | gibberellin-regulated family protein |
           chr2:16500866-16501241 FORWARD
          Length = 87

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 45  CGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           CG  C  RC  + +   C + C  CC +C CVP GT G+ + CPCY  +    G  KCP
Sbjct: 29  CGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECPCYRDMKNSKGGSKCP 87


>AT1G10588.2 | Symbols:  | Encodes a Gibberellin-regulated
           GASA/GAST/Snakin family protein | chr1:3501276-3501655
           FORWARD
          Length = 89

 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 45  CGSACTARCQLSSRPNL-CKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           CG  C+ RC  + R +  C   C  CC +C CVP GT GN + CPCY  +    G  KCP
Sbjct: 30  CGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDECPCYRDMKNSKGGSKCP 89


>AT5G15230.1 | Symbols: GASA4 | GASA4 (GAST1 PROTEIN HOMOLOG 4) |
           chr5:4945017-4946025 FORWARD
          Length = 106

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 31/63 (49%)

Query: 41  EEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRR 100
           +   C S C  RC+ +     C   C  CC +C CVPPG  GN + C CY +  T  G  
Sbjct: 44  KRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGP 103

Query: 101 KCP 103
           KCP
Sbjct: 104 KCP 106


>AT5G15230.2 | Symbols: GASA4 | GASA4 (GAST1 PROTEIN HOMOLOG 4) |
           chr5:4945286-4946025 FORWARD
          Length = 83

 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 31/63 (49%)

Query: 41  EEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRR 100
           +   C S C  RC+ +     C   C  CC +C CVPPG  GN + C CY +  T  G  
Sbjct: 21  KRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGP 80

Query: 101 KCP 103
           KCP
Sbjct: 81  KCP 83