Jatropha Genome Database
- JcCA0254141.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0254141.10 + phase: 0 /partial
(436 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 424 e-119
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 245 3e-65
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 216 2e-56
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 216 2e-56
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 214 8e-56
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 3e-55
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 5e-55
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 6e-55
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 7e-55
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 1e-54
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 3e-54
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 9e-54
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 2e-53
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 2e-53
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 2e-53
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 205 4e-53
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 4e-52
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 202 5e-52
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 9e-52
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 9e-52
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 1e-51
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 2e-51
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 199 3e-51
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 4e-51
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 2e-50
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 7e-50
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 1e-49
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 1e-49
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 1e-49
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 193 2e-49
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 192 3e-49
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 190 2e-48
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 3e-48
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 3e-48
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 7e-48
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 1e-47
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 2e-47
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 2e-47
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 5e-46
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 181 7e-46
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 181 7e-46
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 181 1e-45
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 2e-45
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 178 5e-45
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 178 7e-45
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 9e-45
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 177 1e-44
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 1e-44
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 2e-44
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 175 4e-44
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 174 1e-43
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 173 2e-43
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 3e-43
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 172 3e-43
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 4e-43
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 7e-43
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 171 1e-42
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 169 2e-42
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 5e-42
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 6e-42
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 167 9e-42
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 167 1e-41
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 3e-41
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 164 7e-41
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 2e-40
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 2e-40
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 2e-40
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 5e-40
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 8e-40
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 159 2e-39
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 4e-39
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 4e-39
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 156 3e-38
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 4e-38
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 1e-36
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 2e-36
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 2e-36
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 5e-36
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 4e-35
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 1e-34
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 2e-34
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 2e-34
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 2e-34
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 3e-33
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 4e-33
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 6e-33
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 2e-32
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 5e-32
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 7e-32
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 135 7e-32
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 2e-31
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 5e-31
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 1e-30
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 1e-30
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 2e-30
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 2e-30
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 130 2e-30
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 130 2e-30
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 128 6e-30
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 127 1e-29
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 2e-29
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 3e-29
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 3e-29
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 5e-29
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 124 9e-29
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 1e-28
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 1e-28
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 5e-28
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 120 2e-27
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 120 2e-27
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 120 2e-27
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 116 3e-26
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 4e-25
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 1e-24
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 1e-24
AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 1e-24
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 110 3e-24
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 3e-24
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 4e-24
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 6e-24
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 1e-23
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 3e-23
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 5e-23
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 5e-23
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 6e-23
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 6e-23
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 8e-23
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 9e-23
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 103 2e-22
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 3e-22
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 7e-22
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 7e-22
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 7e-21
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 1e-20
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 3e-20
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 7e-20
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 94 1e-19
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 94 2e-19
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 3e-19
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 93 3e-19
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 93 4e-19
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 5e-19
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 5e-19
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 7e-19
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 7e-19
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 7e-19
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 92 9e-19
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 91 1e-18
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 91 1e-18
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 91 2e-18
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 5e-18
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 5e-18
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 5e-18
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 88 1e-17
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 87 3e-17
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 87 3e-17
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 3e-17
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat... 86 6e-17
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 83 4e-16
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 5e-16
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 82 5e-16
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 6e-16
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 82 7e-16
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 81 1e-15
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 1e-15
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 80 2e-15
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 4e-15
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 6e-15
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 6e-15
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 6e-15
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 7e-15
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 7e-15
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 79 8e-15
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 77 2e-14
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 5e-14
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 5e-14
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 5e-14
AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 6e-14
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 6e-14
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 6e-14
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 75 7e-14
AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 73 3e-13
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 73 4e-13
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 5e-13
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 72 6e-13
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 7e-13
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 72 9e-13
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 4e-12
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 70 4e-12
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 4e-12
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 4e-12
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT1G68980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 1e-11
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 67 2e-11
AT1G07590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 67 3e-11
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 67 3e-11
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 3e-11
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 66 4e-11
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT1G60770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 8e-11
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 64 1e-10
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 64 2e-10
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 64 2e-10
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT5G36300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 63 3e-10
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 5e-10
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 5e-10
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 5e-10
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT2G40240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 9e-10
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 61 2e-09
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 61 2e-09
AT1G69290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 61 2e-09
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 60 2e-09
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 59 6e-09
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 59 7e-09
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 2e-08
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT5G27300.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 6e-08
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 56 6e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 6e-08
AT5G27300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 6e-08
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G28380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT5G28340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G02820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 53 4e-07
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 52 5e-07
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 5e-07
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT3G56030.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 8e-07
AT4G04790.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 8e-07
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 51 1e-06
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT1G76280.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT4G21880.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 51 2e-06
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 50 2e-06
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT1G76280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT1G06270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G30610.1 | Symbols: emb2279 | emb2279 (embryo defective 2279)... 50 4e-06
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 49 5e-06
AT5G67570.1 | Symbols: DG1, EMB1408 | DG1 (DELAYED GREENING 1) |... 49 5e-06
AT4G21170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
>AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3948886-3950859 FORWARD
Length = 657
Score = 424 bits (1089), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/434 (46%), Positives = 295/434 (67%), Gaps = 5/434 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+VIY+ CKE KL EA+SVFYR LK G+WPNVV+FNM+ID ACK G M AL+++ KM +
Sbjct: 222 NLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGM 281
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
MS + P+++TYN +I GFCK G+L +AE+++ +M++ + N RTY L+D Y RA S
Sbjct: 282 MSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGS 341
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+EA RLCDEM KGLV+N+VIYN++++WL++EGD+EG ++ M + D+FT +I
Sbjct: 342 SDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAI 401
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ +GLCRNG V EA +F +I E L+ED HN L+++ R L+ A Q+L SM V+G
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L D ++FG+LIDG+ KEG +E A+++Y+ M+K + NLV+YNS++NGL K
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKR---GMAG 518
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAM--KNAGIAANHATYNTLINF 358
M + D++TYNTL+N +G ++EA M ++ + + T+N +IN
Sbjct: 519 AAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINH 578
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
LCK G ++AKE++K M+ +G VPD ITY LITSFSK S E+V++LHDY++L+GV PH
Sbjct: 579 LCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPH 638
Query: 419 KQTYKAVVSPLLQE 432
+ Y ++V PLL
Sbjct: 639 EHIYLSIVRPLLDR 652
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 149/296 (50%), Gaps = 9/296 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++Y L E + AMSV + + T +++ C+ G + A++ ++
Sbjct: 365 NSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQI-- 422
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S + D + +N L+ F + KL A+++ M+ + + + ++ TLIDGY +
Sbjct: 423 -SEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGK 481
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
LE A + D M+K N VIYN++++ L G M G + ++V+ D TY+
Sbjct: 482 LERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRG-MAGAA---EAVVNAMEIKDIVTYNT 537
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDA--FSHNILINYLCRSNNLSGAKQLLASMYV 238
L + GNV EA SK+ + + + + NI+IN+LC+ + AK++L M
Sbjct: 538 LLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVE 597
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
RG+VPD +T+G+LI K + E V++++ ++ G P+ +Y S++ L E
Sbjct: 598 RGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDRE 653
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 152/318 (47%), Gaps = 4/318 (1%)
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ +++ EM G V N +N VI+ E + + M+ + P+ ++++
Sbjct: 199 IDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNM 258
Query: 181 LTKGLCRNGNVNEAFKFHSKI--LENNLIE-DAFSHNILINYLCRSNNLSGAKQLLASMY 237
+ G C+ G++ A + K+ + N + +A ++N +IN C++ L A+++ M
Sbjct: 259 MIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMV 318
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
G+ + T+G+L+D + + G+ + A+++ ++M G N V+YNS++ L E
Sbjct: 319 KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIE 378
Query: 298 XXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
N+ D T ++ G C +G + EA F + + + +NTL+
Sbjct: 379 GAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLM 438
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
+ + + A +++ M++QG D I++ LI + K+ E ++++D M+
Sbjct: 439 HHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKT 498
Query: 417 PHKQTYKAVVSPLLQEGV 434
+ Y ++V+ L + G+
Sbjct: 499 SNLVIYNSIVNGLSKRGM 516
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 173 PDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQL 232
PD F L + +NG+ A++ + + N + L N + ++
Sbjct: 148 PDVFDS--LVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKV 205
Query: 233 LASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
M G V ++ TF +I CKE + A+ V+ +M+K G PN+V +N +I+G CK
Sbjct: 206 YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACK 265
Query: 293 EEXXXXXXXXXXXXXXMN----LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAAN 348
M+ + +TYN++ING+C +G++D A M +G+ N
Sbjct: 266 TGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCN 325
Query: 349 HATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
TY L++ + G +A L M +G V + + Y ++
Sbjct: 326 ERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIV 368
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 9 KECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRP 68
KE KL A+ ++ +K N+V +N I++ K G A VV+ ME+
Sbjct: 478 KEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI-------K 530
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVR--TYATLIDGYSRARSLEEAFR 126
D +TYN L+ K G + A+ + ++M ++D +V T+ +I+ + S E+A
Sbjct: 531 DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKE 590
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLC 186
+ M+++G+V +S+ Y T+I E V L ++ + P + Y + + L
Sbjct: 591 VLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLL 650
Query: 187 RNGN 190
N
Sbjct: 651 DREN 654
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 230/417 (55%), Gaps = 5/417 (1%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGA-MDLALKVVSKMEVMSVYSIRPDSITY 73
+A+S+ + + HG P V+++N ++D + + A V +M V P+ TY
Sbjct: 152 KALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQV---SPNVFTY 208
Query: 74 NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK 133
N LI GFC G + +A L ++M K +PNV TY TLIDGY + R +++ F+L M
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 134 KGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNE 193
KGL N + YN VI+ L EG M+ VS +++ M D+ TY+ L KG C+ GN ++
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 194 AFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLID 253
A H+++L + L ++ LI+ +C++ N++ A + L M VRGL P+ T+ +L+D
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 254 GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF- 312
G ++G + A +V +M +G P++V YN++ING C L
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
DV++Y+T+++G+C S +DEA M GI + TY++LI C+ ++A +L
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
+ M+ G PD TYT LI ++ + E+ ++LH+ MV KGV+P TY +++ L
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 203/396 (51%), Gaps = 4/396 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I C + A+++F + G PNVVT+N +ID CK+ +D K+ +
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL---LRS 265
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M++ + P+ I+YN +I G C+ G++ + EM + + TY TLI GY + +
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+A + EM++ GL + + Y ++IH + G+M + M + P++ TY+
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G + G +NEA++ ++ +N ++N LIN C + + A +L M +G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L PD+V++ +++ G C+ +V+ A++V +M++ G KP+ + Y+S+I G C++
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 301 XXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ L D TY LIN YC G +++A M G+ + TY+ LIN L
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFS 395
K ++AK L+ + + VP +TY LI + S
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 204/418 (48%), Gaps = 29/418 (6%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NVVI LC+E ++ E V + G + VT+N +I CK G AL + ++M
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM-- 336
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ + P ITY LI CK G + A + ++M + + PN RTY TL+DG+S+
Sbjct: 337 -LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ EA+R+ EM G + V YN +I+ V G ME ++ M + + PD +YS
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ G CR+ +V+EA + +++E + D +++ LI C A L M G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L PD T+ +LI+ +C EG++E A+Q++ +M++ G P++V Y+ +INGL K+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS-----R 570
Query: 301 XXXXXXXXMNLF------DVITYNTLIN---------------GYCNSGKIDEAFAFSFA 339
+ LF +TY+TLI G+C G + EA +
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES 630
Query: 340 MKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK 397
M + YN +I+ C+ G I++A L K M+ GF+ +T L+ + K+
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKE 688
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 2/258 (0%)
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRS-NNLSGAKQLLASM 236
+ ++ K R +++A + + S+N +++ RS N+S A+ + M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXX 296
+ P++ T+ LI G C GN++ A+ +++KM G PN+V YN++I+G CK
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 297 XXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTL 355
L ++I+YN +ING C G++ E M G + + TYNTL
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 356 INFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
I CK G+ QA + M+ G P ITYT LI S K + ++ D M ++G+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 416 IPHKQTYKAVVSPLLQEG 433
P+++TY +V Q+G
Sbjct: 377 CPNERTYTTLVDGFSQKG 394
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 144/350 (41%), Gaps = 88/350 (25%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
EA V +G P+VVT+N +I+ C G M+ A+ V +E M + PD ++Y+
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV---LEDMKEKGLSPDVVSYS 454
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
++ GFC+ + A ++K EM+EK I P+ TY++LI G+ R +EA L +EM++
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT------------ 182
GL + Y +I+ +EGD+E L + MV+ + PD TYS+L
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 183 --------------------------------------KGLCRNGNVNEAFKFHSKILEN 204
KG C G + EA + +L
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 205 NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG---------- 254
N D ++NI+I+ CR+ ++ A L M G + VT +L+
Sbjct: 635 NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNEL 694
Query: 255 -------------------------HCKEGNVENAVQVYEKMMKSGEKPN 279
+ +EGN++ + V +M K G PN
Sbjct: 695 NSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 120/297 (40%), Gaps = 53/297 (17%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ V+ C+ + EA+ V ++ GI P+ +T++ +I C+ A + E
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY---EE 510
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M + PD TY LI +C G L A +L NEM+EK ++P+V TY+ LI+G ++
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIH---------------WLYVEGDMEGVSLLISS 165
EA RL ++ + V + V Y+T+I ++G M + S
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES 630
Query: 166 MVDNRIPPDKFTYSILTKGLCR-----------------------------------NGN 190
M+ PD Y+I+ G CR G
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Query: 191 VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
VNE +L + + +A +L+ R N+ +LA M G +P+ ++
Sbjct: 691 VNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 222/428 (51%), Gaps = 5/428 (1%)
Query: 1 NVVIYALCKEC-KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
NV + L K+C K A+ VF + G+ NV ++N++I C++G + A ++ ME
Sbjct: 657 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 716
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+ PD I+Y+ ++ G+C+ G+L KL M K + PN Y ++I R
Sbjct: 717 LKGY---TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 773
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
L EA EM+++G++ ++V+Y T+I GD+ S M I PD TY+
Sbjct: 774 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ G C+ G++ EA K ++ L D+ + LIN C++ ++ A ++ M
Sbjct: 834 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G P++VT+ +LIDG CKEG++++A ++ +M K G +PN+ YNS++NGLCK
Sbjct: 894 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953
Query: 300 XXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
L D +TY TL++ YC SG++D+A M G+ T+N L+N
Sbjct: 954 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
C G ++ ++L+ M+ +G P+ T+ L+ + + + + ++ M +GV P
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073
Query: 419 KQTYKAVV 426
+TY+ +V
Sbjct: 1074 GKTYENLV 1081
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 204/410 (49%), Gaps = 4/410 (0%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I LC+ CKL EA F ++ GI P+ V + +ID CK G + A K +M
Sbjct: 765 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 824
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
I PD +TY +I GFC++G + A KL +EM K + P+ T+ LI+GY +A ++
Sbjct: 825 ---ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+AFR+ + M++ G N V Y T+I L EGD++ + L+ M + P+ FTY+ +
Sbjct: 882 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
GLC++GN+ EA K + L D ++ L++ C+S + A+++L M +GL
Sbjct: 942 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 1001
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
P IVTF L++G C G +E+ ++ M+ G PN +NS++ C
Sbjct: 1002 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 1061
Query: 303 XXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
+ D TY L+ G+C + + EA+ MK G + + +TY+ LI K
Sbjct: 1062 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 1121
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV 411
+A+E+ M +G D + + K P+ ++ D ++
Sbjct: 1122 RKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 1171
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 216/433 (49%), Gaps = 4/433 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+VI+ +C+ ++ EA + G P+V++++ +++ C+ G +D K++ EV
Sbjct: 693 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI---EV 749
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M ++P+S Y +IG C++ KL AE+ +EM+ + I+P+ Y TLIDG+ +
Sbjct: 750 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ A + EM + + + + Y +I GDM L M + PD T++
Sbjct: 810 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 869
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C+ G++ +AF+ H+ +++ + ++ LI+ LC+ +L A +LL M+ G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L P+I T+ S+++G CK GN+E AV++ + +G + V Y ++++ CK
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989
Query: 301 XXXXXXXXMNLFD-VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
L ++T+N L+NG+C G +++ M GIA N T+N+L+
Sbjct: 990 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 1049
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
C +++ A + K M +G PD TY L+ K + +E L M KG
Sbjct: 1050 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 1109
Query: 420 QTYKAVVSPLLQE 432
TY ++ L+
Sbjct: 1110 STYSVLIKGFLKR 1122
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 206/422 (48%), Gaps = 36/422 (8%)
Query: 13 LLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSIT 72
L EA VF + L +G+ +V + N+ + K A ++ E V + + +
Sbjct: 634 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATAIIVFREFPEV-GVCWNVAS 691
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
YN +I C++G++ A L M K P+V +Y+T+++GY R L++ ++L + M
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
+KGL NS IY ++I L + S M+ I PD Y+ L G C+ G++
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
A KF ++ ++ D ++ +I+ C+ ++ A +L M+ +GL PD VTF LI
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF 312
+G+CK G++++A +V+ M+++G PN
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPN--------------------------------- 898
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
V+TY TLI+G C G +D A M G+ N TYN+++N LCK G+I++A +L+
Sbjct: 899 -VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 957
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
G D +TYT L+ ++ K ++ ++ M+ KG+ P T+ +++
Sbjct: 958 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 1017
Query: 433 GV 434
G+
Sbjct: 1018 GM 1019
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 172/371 (46%), Gaps = 10/371 (2%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRT---YATLI--DGYSRARSLEE 123
D ++ G L A ++ +M+ +V +V + Y T + D Y A ++
Sbjct: 617 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAII- 675
Query: 124 AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
FR E + G+ N YN VIH++ G ++ L+ M PD +YS +
Sbjct: 676 VFR---EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
G CR G +++ +K + L +++ + +I LCR L+ A++ + M +G++P
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
D V + +LIDG CK G++ A + + +M P+++ Y ++I+G C+
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852
Query: 304 XXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKL 362
L D +T+ LINGYC +G + +AF M AG + N TY TLI+ LCK
Sbjct: 853 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912
Query: 363 GHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
G + A EL+ M G P+ TY ++ K + EE +KL G+ TY
Sbjct: 913 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 972
Query: 423 KAVVSPLLQEG 433
++ + G
Sbjct: 973 TTLMDAYCKSG 983
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 1 NVVIY-----ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
NVV Y LCKE L A + + K G+ PN+ T+N I++ CK G ++ A+K+V
Sbjct: 898 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 957
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
+ E + D++TY L+ +CK G++ A+++ EM+ K + P + T+ L++G+
Sbjct: 958 GEFEAAG---LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
LE+ +L + M+ KG+ N+ +N+++ + +++ + + M + PD
Sbjct: 1015 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 1074
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
TY L KG C+ N+ EA+ ++ ++++LI + A+++
Sbjct: 1075 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 1134
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
M GL D F D K + V ++++++
Sbjct: 1135 MRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 1173
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 222/428 (51%), Gaps = 5/428 (1%)
Query: 1 NVVIYALCKEC-KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
NV + L K+C K A+ VF + G+ NV ++N++I C++G + A ++ ME
Sbjct: 657 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 716
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+ PD I+Y+ ++ G+C+ G+L KL M K + PN Y ++I R
Sbjct: 717 LKGY---TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 773
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
L EA EM+++G++ ++V+Y T+I GD+ S M I PD TY+
Sbjct: 774 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ G C+ G++ EA K ++ L D+ + LIN C++ ++ A ++ M
Sbjct: 834 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G P++VT+ +LIDG CKEG++++A ++ +M K G +PN+ YNS++NGLCK
Sbjct: 894 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953
Query: 300 XXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
L D +TY TL++ YC SG++D+A M G+ T+N L+N
Sbjct: 954 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
C G ++ ++L+ M+ +G P+ T+ L+ + + + + ++ M +GV P
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073
Query: 419 KQTYKAVV 426
+TY+ +V
Sbjct: 1074 GKTYENLV 1081
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 204/410 (49%), Gaps = 4/410 (0%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I LC+ CKL EA F ++ GI P+ V + +ID CK G + A K +M
Sbjct: 765 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 824
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
I PD +TY +I GFC++G + A KL +EM K + P+ T+ LI+GY +A ++
Sbjct: 825 ---ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+AFR+ + M++ G N V Y T+I L EGD++ + L+ M + P+ FTY+ +
Sbjct: 882 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
GLC++GN+ EA K + L D ++ L++ C+S + A+++L M +GL
Sbjct: 942 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 1001
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
P IVTF L++G C G +E+ ++ M+ G PN +NS++ C
Sbjct: 1002 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 1061
Query: 303 XXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
+ D TY L+ G+C + + EA+ MK G + + +TY+ LI K
Sbjct: 1062 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 1121
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV 411
+A+E+ M +G D + + K P+ ++ D ++
Sbjct: 1122 RKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 1171
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 216/433 (49%), Gaps = 4/433 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+VI+ +C+ ++ EA + G P+V++++ +++ C+ G +D K++ EV
Sbjct: 693 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI---EV 749
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M ++P+S Y +IG C++ KL AE+ +EM+ + I+P+ Y TLIDG+ +
Sbjct: 750 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ A + EM + + + + Y +I GDM L M + PD T++
Sbjct: 810 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 869
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C+ G++ +AF+ H+ +++ + ++ LI+ LC+ +L A +LL M+ G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L P+I T+ S+++G CK GN+E AV++ + +G + V Y ++++ CK
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989
Query: 301 XXXXXXXXMNLFD-VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
L ++T+N L+NG+C G +++ M GIA N T+N+L+
Sbjct: 990 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 1049
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
C +++ A + K M +G PD TY L+ K + +E L M KG
Sbjct: 1050 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 1109
Query: 420 QTYKAVVSPLLQE 432
TY ++ L+
Sbjct: 1110 STYSVLIKGFLKR 1122
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 206/422 (48%), Gaps = 36/422 (8%)
Query: 13 LLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSIT 72
L EA VF + L +G+ +V + N+ + K A ++ E V + + +
Sbjct: 634 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATAIIVFREFPEV-GVCWNVAS 691
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
YN +I C++G++ A L M K P+V +Y+T+++GY R L++ ++L + M
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
+KGL NS IY ++I L + S M+ I PD Y+ L G C+ G++
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
A KF ++ ++ D ++ +I+ C+ ++ A +L M+ +GL PD VTF LI
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF 312
+G+CK G++++A +V+ M+++G PN
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPN--------------------------------- 898
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
V+TY TLI+G C G +D A M G+ N TYN+++N LCK G+I++A +L+
Sbjct: 899 -VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 957
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
G D +TYT L+ ++ K ++ ++ M+ KG+ P T+ +++
Sbjct: 958 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 1017
Query: 433 GV 434
G+
Sbjct: 1018 GM 1019
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 172/371 (46%), Gaps = 10/371 (2%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRT---YATLI--DGYSRARSLEE 123
D ++ G L A ++ +M+ +V +V + Y T + D Y A ++
Sbjct: 617 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAII- 675
Query: 124 AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
FR E + G+ N YN VIH++ G ++ L+ M PD +YS +
Sbjct: 676 VFR---EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
G CR G +++ +K + L +++ + +I LCR L+ A++ + M +G++P
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
D V + +LIDG CK G++ A + + +M P+++ Y ++I+G C+
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852
Query: 304 XXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKL 362
L D +T+ LINGYC +G + +AF M AG + N TY TLI+ LCK
Sbjct: 853 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912
Query: 363 GHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
G + A EL+ M G P+ TY ++ K + EE +KL G+ TY
Sbjct: 913 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 972
Query: 423 KAVVSPLLQEG 433
++ + G
Sbjct: 973 TTLMDAYCKSG 983
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 1 NVVIY-----ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
NVV Y LCKE L A + + K G+ PN+ T+N I++ CK G ++ A+K+V
Sbjct: 898 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 957
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
+ E + D++TY L+ +CK G++ A+++ EM+ K + P + T+ L++G+
Sbjct: 958 GEFEAAG---LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
LE+ +L + M+ KG+ N+ +N+++ + +++ + + M + PD
Sbjct: 1015 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 1074
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
TY L KG C+ N+ EA+ ++ ++++LI + A+++
Sbjct: 1075 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 1134
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
M GL D F D K + V ++++++
Sbjct: 1135 MRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 1173
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 214 bits (545), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 219/460 (47%), Gaps = 39/460 (8%)
Query: 10 ECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPD 69
+ KL +A+ +F ++ P++V FN ++ KM DL V+S E M I D
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDL---VISLGERMQNLRISYD 114
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
+YN LI FC+ +L +A + +MM+ P++ T ++L++GY + + EA L D
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
+M N+V +NT+IH L++ LI MV PD FTY + GLC+ G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 190 -----------------------------------NVNEAFKFHSKILENNLIEDAFSHN 214
NVN+A +++ + + ++N
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
LI LC S A +LL+ M R + P++VTF +LID KEG + A ++Y++M+K
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 275 GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEA 333
P++ Y+S+ING C + + F +V+TYNTLI G+C + +++E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 334 FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
M G+ N TYNTLI L + G A+++ K M+ G PD ITY+IL+
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 394 FSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
K E+ + + +Y+ + P TY ++ + + G
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 224/466 (48%), Gaps = 33/466 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I C+ +L A++V + +K G P++VT + +++ C + A+ +V +M V
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 61 MS--------------------------------VYSIRPDSITYNCLIGGFCKMGKLTM 88
M +PD TY ++ G CK G + +
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A L +M + I +V Y T+ID +++ +A L EM KG+ N V YN++I
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
L G S L+S M++ +I P+ T+S L + G + EA K + ++++ ++
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D F+++ LIN C + L AK + M + P++VT+ +LI G CK VE ++++
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNS 327
+M + G N V YN++I GL + + D+ITY+ L++G C
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
GK+++A ++ + + + TYN +I +CK G ++ +L + L+G P+ I Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 388 TILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
T +I+ F +K EE L M G +P+ TY ++ L++G
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 211/427 (49%), Gaps = 39/427 (9%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I+ L K EA+++ R + G P++ T+ +++ CK G +DLAL ++ KME
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 61 --------------------------------MSVYSIRPDSITYNCLIGGFCKMGKLTM 88
M IRP+ +TYN LI C G+ +
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A +L ++M+E+ I PNV T++ LID + + L EA +L DEM+K+ + + Y+++I+
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
+ ++ + M+ P+ TY+ L KG C+ V E + ++ + L+
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
+ ++N LI L ++ + A+++ M G+ PDI+T+ L+DG CK G +E A+ V+
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 269 EKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVITYNTLINGY 324
E + KS +P++ YN +I G+CK E+ N VI Y T+I+G+
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN---VIIYTTMISGF 545
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
C G +EA A MK G N TYNTLI + G + EL+K M GFV D
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 605
Query: 385 ITYTILI 391
T +++I
Sbjct: 606 STISMVI 612
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 178/359 (49%), Gaps = 37/359 (10%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I LC + +A + ++ I PNVVTF+ +ID K G + A K+ +M
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-- 351
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
SI PD TY+ LI GFC +L A+ + M+ KD PNV TY TLI G+ +A+
Sbjct: 352 -IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+EE L EM ++GLV N+V YNT+I L+ GD + + MV + +PPD TYSI
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GLC+ G + +A + ++ + D +++NI+I +C++ + L S+ ++G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ P+++ + ++I G C++G E A ++ +M + G PN +G
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN--------SG----------- 571
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
TYNTLI G + M++ G + +T + +IN L
Sbjct: 572 ---------------TYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 165/366 (45%), Gaps = 24/366 (6%)
Query: 85 KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYN 144
KL A L EM++ +P++ + L+ ++ + L + M + + YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 145 TVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
+I+ + ++ M+ PD T S L G C ++EA ++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 205 NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA 264
+ + N LI+ L N S A L+ M RG PD+ T+G++++G CK G+++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 265 VQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF----------DV 314
+ + +KM K + ++V+Y ++I+ LC + +NLF +V
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYK---------NVNDALNLFTEMDNKGIRPNV 290
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
+TYN+LI CN G+ +A M I N T++ LI+ K G + +A++L
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 375 MILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV-----SPL 429
MI + PD TY+ LI F +E + + M+ K P+ TY ++ +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 430 LQEGVE 435
++EG+E
Sbjct: 411 VEEGME 416
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L++ + + +++A +++++ + N L++ + + N L M
Sbjct: 51 LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 110
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ D+ ++ LI+ C+ + A+ V KMMK G +P++V +S++NG C +
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
M + +T+NTLI+G K EA A M G + TY T++N L
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
CK G I A L+K M D + YT +I + + + + L M KG+ P+
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 420 QTYKAVVSPLLQEG 433
TY +++ L G
Sbjct: 291 VTYNSLIRCLCNYG 304
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++++ LCK KL +A+ VF K + P++ T+N++I+ CK G ++ + +
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-- 526
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S+ ++P+ I Y +I GFC+ G A+ L EM E +PN TY TLI R
Sbjct: 527 -SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME 157
+ L EM G V ++ + VI+ L+ +G +E
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINMLH-DGRLE 621
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 222/435 (51%), Gaps = 7/435 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ LC K EAM + + +++G PN VT+ +++V CK G LA++++ KME
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+I+ D++ Y+ +I G CK G L A L NEM K I N+ TY LI G+ A
Sbjct: 257 ---RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ +L +M+K+ + N V ++ +I EG + L M+ I PD TY+
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C+ ++++A + ++ + + NILIN C++N + +L M +RG
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK--EEXXXX 298
+V D VT+ +LI G C+ G + A +++++M+ PN+V Y +++GLC E
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 299 XXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
M L D+ YN +I+G CN+ K+D+A+ ++ G+ TYN +I
Sbjct: 494 EIFEKIEKSKMEL-DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
LCK G + +A+ L + M G PD TY ILI + + +KL + + G
Sbjct: 553 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Query: 419 KQTYKAVVSPLLQEG 433
T K V+ +L +G
Sbjct: 613 ASTIKMVID-MLSDG 626
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 219/437 (50%), Gaps = 4/437 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ +I LC E ++ EA+ + R ++ G P+++T N +++ C G A+ ++ KM
Sbjct: 162 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM-- 219
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
Y +P+++TY ++ CK G+ +A +L +M E++I + Y+ +IDG + S
Sbjct: 220 -VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L+ AF L +EM KG+ N + YN +I G + + L+ M+ +I P+ T+S+
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + G + EA + H +++ + D ++ LI+ C+ N+L A Q++ M +G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
P+I TF LI+G+CK +++ ++++ KM G + V YN++I G C+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 301 XXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ +++TY L++G C++G+ ++A ++ + + + YN +I+ +
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
C + A +L + L+G P TY I+I KK E L M G P
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 420 QTYKAVVSPLLQEGVET 436
TY ++ L +G T
Sbjct: 579 WTYNILIRAHLGDGDAT 595
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 206/407 (50%), Gaps = 16/407 (3%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
++ ALCK+ +L GI N+ T +++I+ C+ + LA + K+ +
Sbjct: 106 LVLALCKQMEL------------KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
P++IT++ LI G C G+++ A +L + M+E P++ T TL++G +
Sbjct: 154 Y---EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
EA L D+M++ G N+V Y V++ + G L+ M + I D YSI+
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
GLC++G+++ AF +++ + + ++NILI C + +LL M R +
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
P++VTF LID KEG + A +++++M+ G P+ + Y S+I+G CKE
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 303 XXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
++ T+N LINGYC + +ID+ M G+ A+ TYNTLI C+
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHD 408
LG + AKEL + M+ + P+ +TY IL+ E+ +++ +
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 182/367 (49%), Gaps = 1/367 (0%)
Query: 68 PDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRL 127
P I ++ L K + + L +M K I N+ T + +I+ + R R L AF
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 128 CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR 187
+++K G N++ ++T+I+ L +EG + L+ MV+ PD T + L GLC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
+G EA K++E +A ++ ++N +C+S + A +LL M R + D V
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXX 307
+ +IDG CK G+++NA ++ +M G N++ YN +I G C
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 308 XMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
+ +V+T++ LI+ + GK+ EA M + GIA + TY +LI+ CK H+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
+A +++ +M+ +G P+ T+ ILI + K ++ ++L M L+GV+ TY ++
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 427 SPLLQEG 433
+ G
Sbjct: 446 QGFCELG 452
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 169/352 (48%), Gaps = 25/352 (7%)
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A L +M+ +P V ++ L ++ + + LC +M KG+ N + +I+
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 149 WLYVEGDMEGVSLLISSM---VDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
+ L S+M + P+ T+S L GLC G V+EA + +++E
Sbjct: 132 CFC---RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
D + N L+N LC S + A L+ M G P+ VT+G +++ CK G A+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF----------DVI 315
++ KM + K + V Y+ +I+GLCK NLF ++I
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKH---------GSLDNAFNLFNEMEMKGITTNII 299
Query: 316 TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM 375
TYN LI G+CN+G+ D+ M I N T++ LI+ K G +++A+EL K M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 376 ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
I +G PD ITYT LI F K+ ++ ++ D MV KG P+ +T+ +++
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 36/307 (11%)
Query: 162 LISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLC 221
L M+ +R P +S L + + + ++ + + ++ +I+IN C
Sbjct: 75 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134
Query: 222 RSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLV 281
R L A + + G P+ +TF +LI+G C EG V A+++ ++M++ G KP+L+
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194
Query: 282 LYNSVINGL-----------------------------------CKEEXXXXXXXXXXXX 306
N+++NGL CK
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 307 XXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
N+ D + Y+ +I+G C G +D AF M+ GI N TYN LI C G
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
+L++ MI + P+ +T+++LI SF K+ E +LH M+ +G+ P TY ++
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 426 VSPLLQE 432
+ +E
Sbjct: 375 IDGFCKE 381
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I+ +C K+ +A +F G+ P V T+N++I CK G + A + KME
Sbjct: 512 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
PD TYN LI G T + KL E+ + T +ID S R
Sbjct: 572 ---DGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGR- 627
Query: 121 LEEAF 125
L+++F
Sbjct: 628 LKKSF 632
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 210/399 (52%), Gaps = 3/399 (0%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
+N +++ + G +D +V ME++ + P+ TYN ++ G+CK+G + A + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVY--MEMLED-KVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG 154
+++E + P+ TY +LI GY + + L+ AF++ +EM KG N V Y +IH L V
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 155 DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHN 214
++ L M D+ P TY++L K LC + +EA ++ E + + ++
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
+LI+ LC A++LL M +GL+P+++T+ +LI+G+CK G +E+AV V E M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 275 GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAF 334
PN YN +I G CK L DV+TYN+LI+G C SG D A+
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 335 AFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
M + G+ + TY ++I+ LCK +++A +L + +G P+ + YT LI +
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 395 SKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
K +E + + M+ K +P+ T+ A++ L +G
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 221/446 (49%), Gaps = 24/446 (5%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
V+I +LC +CK +A + + L+ G+ PNV+T+N +I+ CK G ++ A+ VV E+M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV---ELM 419
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
+ P++ TYN LI G+CK + A + N+M+E+ ++P+V TY +LIDG R+ +
Sbjct: 420 ESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+ A+RL M +GLV + Y ++I L +E L S+ + P+ Y+ L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
G C+ G V+EA K+L N + ++ + N LI+ LC L A L M GL
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
P + T LI K+G+ ++A +++M+ SG KP+ Y + I C+E
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 302 XXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
+ D+ TY++LI GY + G+ + AF M++ G + T+ +LI L
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 361 KLGHIQQAK------------------ELMKVMILQGFVPDYITYTILITSFSKKCSPEE 402
++ + +Q EL++ M+ P+ +Y LI + +
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 403 VIKLHDYMVL-KGVIPHKQTYKAVVS 427
K+ D+M +G+ P + + A++S
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLS 804
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 216/454 (47%), Gaps = 24/454 (5%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I CK + +AM V + L+ + P+VVT+N +ID C+ G D A +++S +
Sbjct: 432 NELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS---L 487
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M+ + PD TY +I CK ++ A L + + +K + PNV Y LIDGY +A
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++EA + ++M+ K + NS+ +N +IH L +G ++ +LL MV + P T +I
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L L ++G+ + A+ ++L + DA ++ I CR L A+ ++A M G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ PD+ T+ SLI G+ G A V ++M +G +P+ + S+I L + +
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 301 XXXXXXXXMNL--FDVI-----------------TYNTLINGYCNSGKIDEAF-AFSFAM 340
N+ FD + +Y LI G C G + A F
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 341 KNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSP 400
+N GI+ + +N L++ CKL +A +++ MI G +P + +LI KK
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 401 EEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
E + ++ G + +K ++ + ++G+
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGL 881
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 8/251 (3%)
Query: 185 LCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD 244
LCR N +E F+ K++ +N L+N L R + KQ+ M + P+
Sbjct: 165 LCRKMNKDERFELKYKLI-------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN 217
Query: 245 IVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXX 304
I T+ +++G+CK GNVE A Q K++++G P+ Y S+I G C+ +
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 305 XXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLG 363
+ + Y LI+G C + +IDEA MK+ TY LI LC
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337
Query: 364 HIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYK 423
+A L+K M G P+ TYT+LI S +C E+ +L M+ KG++P+ TY
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397
Query: 424 AVVSPLLQEGV 434
A+++ + G+
Sbjct: 398 ALINGYCKRGM 408
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 167/409 (40%), Gaps = 58/409 (14%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I +LCK ++ EA +F + G+ PNVV + +ID CK G +D A ++ KM +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
P+S+T+N LI G C GKL A L+ +M++ + P V T LI + +
Sbjct: 563 CL---PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
A+ +M+ G ++ Y T I EG + +++ M +N + PD FTYS L
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 183 KG--------------------------------------------------LCRNGNVN 192
KG LC N+
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 193 E---AFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV-RGLVPDIVTF 248
E + K++E+++ +A S+ LI +C NL A+++ M G+ P + F
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
+L+ CK A +V + M+ G P L +I GL K+
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Query: 309 MNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
+ D + + +I+G G ++ + M+ G + TY+ LI
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 57/343 (16%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I+ LC + KL EA + + +K G+ P V T ++I K G D A S+ +
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA---YSRFQQ 627
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M +PD+ TY I +C+ G+L AE + +M E + P++ TY++LI GY
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVI-HWLYVE-GDMEG----------------VSLL 162
AF + M G + + ++I H L ++ G +G V L
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 163 ISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA-FSHNILINYLC 221
+ MV++ + P+ +Y L G+C GN+ A K + N I + N L++ C
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 222 RSNNLSGAKQLLASMYVRGLVP-----------------------------------DIV 246
+ + A +++ M G +P D +
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDEL 867
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING 289
+ +IDG K+G VE +++ M K+G K + Y+ +I G
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 226/436 (51%), Gaps = 8/436 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I +LCK K EA +F R K G+ PN VT++++ID+ C+ G +D AL + +M
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 61 MSV-YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+ S+ P YN LI G CK G ++ AE EM+ K + P V TY +L+ GY
Sbjct: 431 TGLKLSVYP----YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+ +A RL EM KG+ + + T++ L+ G + L + M + + P++ TY+
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
++ +G C G++++AF+F ++ E ++ D +S+ LI+ LC + S AK + ++
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
+ + + L+ G C+EG +E A+ V ++M++ G +LV Y +I+G K +
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLF 666
Query: 300 XXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
L D + Y ++I+ +G EAF M N G N TY +IN
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK-KCSPEEVIKLHDYMVLKGVIP 417
LCK G + +A+ L M VP+ +TY + +K + ++ ++LH+ +LKG++
Sbjct: 727 LCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHN-AILKGLLA 785
Query: 418 HKQTYKAVVSPLLQEG 433
+ TY ++ ++G
Sbjct: 786 NTATYNMLIRGFCRQG 801
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 200/414 (48%), Gaps = 4/414 (0%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
VI +LC+ L A + G N+V +N++ID CK + + V + ++
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV---WEAVGIKKDLA 289
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
++PD +TY L+ G CK+ + + ++ +EM+ P+ ++L++G + +E
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
EA L ++ G+ N +YN +I L LL M + P+ TYSIL
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
CR G ++ A F ++++ L + +N LIN C+ ++S A+ +A M + L
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
P +VT+ SL+ G+C +G + A+++Y +M G P++ + ++++GL +
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 303 XXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
N+ + +TYN +I GYC G + +AF F M GI + +Y LI+ LC
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
G +AK + + + I YT L+ F ++ EE + + MV +GV
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 190/419 (45%), Gaps = 39/419 (9%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
AM +F + GI P+V + +I C++ + A ++++ ME + + YN
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGC---DVNIVPYNV 267
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
LI G CK K+ A +K ++ KD+ P+V TY TL+ G + + E + DEM+
Sbjct: 268 LIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL- 326
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
R P + S L +GL + G + EA
Sbjct: 327 ----------------------------------RFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 196 KFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGH 255
++++ + + F +N LI+ LC+ A+ L M GL P+ VT+ LID
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 256 CKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DV 314
C+ G ++ A+ +M+ +G K ++ YNS+ING CK L V
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
+TY +L+ GYC+ GKI++A M GIA + T+ TL++ L + G I+ A +L
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 375 MILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
M P+ +TY ++I + ++ + + M KG++P +Y+ ++ L G
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 158/335 (47%), Gaps = 1/335 (0%)
Query: 101 IVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVS 160
++P VRT + L+ G + R A L ++M+ G+ + IY VI L D+
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 161 LLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYL 220
+I+ M + Y++L GLC+ V EA + +L D ++ L+ L
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 221 CRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNL 280
C+ +++ M P SL++G K G +E A+ + ++++ G PNL
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 281 VLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFA 339
+YN++I+ LCK + L + +TY+ LI+ +C GK+D A +F
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 340 MKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCS 399
M + G+ + YN+LIN CK G I A+ M MI + P +TYT L+ + K
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 400 PEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
+ ++L+ M KG+ P T+ ++S L + G+
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 144/278 (51%), Gaps = 5/278 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+++ C+E KL EA+SV ++ G+ ++V + ++ID + K L ++ +M
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
++PD + Y +I K G A + + M+ + VPN TY +I+G +A +
Sbjct: 678 ---LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYV-EGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
EA LC +M V N V Y + L E DM+ L ++++ + + TY++L
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA-NTATYNML 793
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
+G CR G + EA + ++++ + + D ++ +IN LCR N++ A +L SM +G+
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPN 279
PD V + +LI G C G + A ++ +M++ G PN
Sbjct: 854 RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I C++ ++ EA + R + G+ P+ +T+ +I+ C+ + A+++ + M
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM-- 848
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ IRPD + YN LI G C G++ A +L+NEM+ + ++PN +T T + ++S
Sbjct: 849 -TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSSKS 907
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 211 bits (537), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 223/460 (48%), Gaps = 39/460 (8%)
Query: 10 ECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPD 69
E KL +A+++F +K +P+++ F+ ++ KM D+ V+S E M I +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV---VISLGEQMQNLGIPHN 115
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
TY+ LI FC+ +L +A + +MM+ PN+ T ++L++GY ++ + EA L D
Sbjct: 116 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 175
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
+M G N+V +NT+IH L++ LI MV PD TY ++ GLC+ G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 190 NVNEAFKFHSKILENNL-------------------IEDAF----------------SHN 214
+ + AF +K+ + L ++DA +++
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
LI+ LC S A +LL+ M R + PD+ TF +LID KEG + A ++Y++M+K
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 275 GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEA 333
P++V Y+S+ING C + + F DV+TYNTLI G+C +++E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 334 FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
M G+ N TYN LI L + G A+E+ K M+ G P+ +TY L+
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 394 FSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
K E+ + + +Y+ + P TY ++ + + G
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 218/427 (51%), Gaps = 4/427 (0%)
Query: 8 CKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIR 67
C ++ EA+++ + G PN VTFN +I + + A + ++ ++ M +
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH---GLFLHNKASEAMALIDRMVAKGCQ 218
Query: 68 PDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRL 127
PD +TY ++ G CK G +A L N+M + + P V Y T+IDG + + +++A L
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 128 CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR 187
EM KG+ N V Y+++I L G S L+S M++ +I PD FT+S L +
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
G + EA K + ++++ ++ +++ LIN C + L AKQ+ M + PD+VT
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXX 307
+ +LI G CK VE ++V+ +M + G N V YN +I GL +
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 308 XMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
+ +++TYNTL++G C +GK+++A ++ + + TYN +I +CK G ++
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
+L + L+G PD + Y +I+ F +K S EE L M G +P+ Y ++
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 427 SPLLQEG 433
L++G
Sbjct: 579 RARLRDG 585
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 202/386 (52%), Gaps = 4/386 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
VV+ LCK A ++ + + + P V+ +N IID CK MD AL + +ME
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
IRP+ +TY+ LI C G+ + A +L ++M+E+ I P+V T++ LID + + L
Sbjct: 286 G---IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
EA +L DEM+K+ + + V Y+++I+ + ++ + MV PD TY+ L
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
KG C+ V E + ++ + L+ + ++NILI L ++ + A+++ M G+
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
P+I+T+ +L+DG CK G +E A+ V+E + +S +P + YN +I G+CK
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 302 XXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
+ DV+ YNT+I+G+C G +EA A MK G N YNTLI
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 361 KLGHIQQAKELMKVMILQGFVPDYIT 386
+ G + + EL+K M GF D T
Sbjct: 583 RDGDREASAELIKEMRSCGFAGDAST 608
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 177/366 (48%), Gaps = 32/366 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
N +I LCK + +A+++F GI PNVVT++ +I C G A +++S M
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 59 ------------------------EVMSVY------SIRPDSITYNCLIGGFCKMGKLTM 88
E +Y SI P +TY+ LI GFC +L
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A+++ M+ K P+V TY TLI G+ + + +EE + EM ++GLV N+V YN +I
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
L+ GD + + MV + +PP+ TY+ L GLC+NG + +A + + +
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
+++NI+I +C++ + L ++ ++G+ PD+V + ++I G C++G+ E A ++
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG 328
++M + G PN YN++I ++ + L+ + G
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
Query: 329 KIDEAF 334
++D++F
Sbjct: 620 RLDKSF 625
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 213/427 (49%), Gaps = 37/427 (8%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
V+ LCK A+ +F + + I +VV ++++ID CK G+ D AL + ++ME+
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM-- 273
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
I+ D +TY+ LIGG C GK K+ EM+ ++I+P+V T++ LID + + L
Sbjct: 274 -KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
EA L +EM+ +G+ +++ YN++I E + + + MV PD TYSIL
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
C+ V++ + +I LI + ++N L+ C+S L+ AK+L M RG+
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
P +VT+G L+DG C G + A++++EKM KS + +YN +I+G+
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM------------ 500
Query: 303 XXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKL 362
CN+ K+D+A++ ++ + G+ + TYN +I LCK
Sbjct: 501 ----------------------CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 363 GHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
G + +A L + M G PD TY ILI + ++L + M + G T
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598
Query: 423 KAVVSPL 429
K V+ L
Sbjct: 599 KMVIDML 605
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 214/433 (49%), Gaps = 4/433 (0%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
++I C++ KLL A SV R+ K G P+ +TF+ +++ C G + A+ +V +M M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
RPD +T + LI G C G+++ A L + M+E P+ TY +++ ++ +
Sbjct: 170 KQ---RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
A L +M ++ + + V Y+ VI L +G + L + M I D TYS L
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
GLC +G ++ K +++ N+I D + + LI+ + L AK+L M RG+
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
PD +T+ SLIDG CKE + A Q+++ M+ G +P++V Y+ +IN CK +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 302 XXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
L + ITYNTL+ G+C SGK++ A M + G+ + TY L++ LC
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
G + +A E+ + M Y I+I ++ L + KGV P
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 421 TYKAVVSPLLQEG 433
TY ++ L ++G
Sbjct: 527 TYNVMIGGLCKKG 539
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 186/367 (50%), Gaps = 4/367 (1%)
Query: 26 HGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGK 85
+GI ++ T ++I+ C+ + A V+ + + PD+IT++ L+ GFC G+
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGY---EPDTITFSTLVNGFCLEGR 155
Query: 86 LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNT 145
++ A L + M+E P++ T +TLI+G + EA L D M++ G + V Y
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
V++ L G+ L M + I YSI+ LC++G+ ++A +++
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
+ D +++ LI LC ++L M R ++PD+VTF +LID KEG + A
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGY 324
++Y +M+ G P+ + YNS+I+G CKE D++TY+ LIN Y
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
C + ++D+ + + G+ N TYNTL+ C+ G + AKEL + M+ +G P
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 385 ITYTILI 391
+TY IL+
Sbjct: 456 VTYGILL 462
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I+ +C K+ +A S+F G+ P+VVT+N++I CK G++ A + KM+
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
PD TYN LI L + +L EM + T +ID S R
Sbjct: 554 ---DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS-DRR 609
Query: 121 LEEAF 125
L+++F
Sbjct: 610 LDKSF 614
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 212/417 (50%), Gaps = 7/417 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+I CK ++ A+SV R + P+VVT+N I+ C G + A++V+ +M
Sbjct: 176 NVMISGYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
Y PD ITY LI C+ + A KL +EM ++ P+V TY L++G +
Sbjct: 233 RDCY---PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L+EA + ++M G N + +N ++ + G L++ M+ P T++I
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L LCR G + A K+ ++ ++ S+N L++ C+ + A + L M RG
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
PDIVT+ +++ CK+G VE+AV++ ++ G P L+ YN+VI+GL K
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+L D ITY++L+ G GK+DEA F + GI N T+N+++ L
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
CK +A + + MI +G P+ +YTILI + + +E ++L + + KG++
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 206/402 (51%), Gaps = 7/402 (1%)
Query: 26 HGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGK 85
HG P+++ +I C++G A K+ +E++ PD ITYN +I G+CK G+
Sbjct: 131 HGNVPDIIPCTTLIRGFCRLGKTRKAAKI---LEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 86 LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNT 145
+ A + + M + P+V TY T++ + L++A + D M+++ + + Y
Sbjct: 188 INNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
+I + + L+ M D PD TY++L G+C+ G ++EA KF + + +
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
+ +HNI++ +C + A++LLA M +G P +VTF LI+ C++G + A+
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGY 324
+ EKM + G +PN + YN +++G CKE+ + D++TYNT++
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
C GK+++A + + G + TYNT+I+ L K G +A +L+ M + PD
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 385 ITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
ITY+ L+ S++ +E IK G+ P+ T+ +++
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 168/353 (47%), Gaps = 4/353 (1%)
Query: 82 KMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSV 141
+ G+L K M+ VP++ TLI G+ R +A ++ + + G V + +
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 142 IYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
YN +I G++ ++ M + PD TY+ + + LC +G + +A + ++
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 202 LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNV 261
L+ + D ++ ILI CR + + A +LL M RG PD+VT+ L++G CKEG +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 262 ENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTL 320
+ A++ M SG +PN++ +N ++ +C V+T+N L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 321 INGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGF 380
IN C G + A M G N +YN L++ CK + +A E ++ M+ +G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 381 VPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
PD +TY ++T+ K E+ +++ + + KG P TY V+ L + G
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 155/335 (46%), Gaps = 21/335 (6%)
Query: 105 VRTYATLIDGYSRA------RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEG 158
+ + TL GYS + S+ +F L D V N + + G++E
Sbjct: 72 AQKFETLSSGYSNSNGNGHYSSVNSSFALED-----------VESNNHLRQMVRTGELEE 120
Query: 159 VSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILIN 218
+ +MV + PD + L +G CR G +A K + + + D ++N++I+
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 219 YLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKP 278
C++ ++ A +L M V PD+VT+ +++ C G ++ A++V ++M++ P
Sbjct: 181 GYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 279 NLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFS 337
+++ Y +I C++ DV+TYN L+NG C G++DEA F
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 338 FAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK 397
M ++G N T+N ++ +C G A++L+ M+ +GF P +T+ ILI +K
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 398 CSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
I + + M G P+ +Y ++ +E
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 116/215 (53%), Gaps = 3/215 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +++ CKE K+ A+ R + G +P++VT+N ++ CK G ++ A+++++++
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL-- 440
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S P ITYN +I G K GK A KL +EM KD+ P+ TY++L+ G SR
Sbjct: 441 -SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++EA + E + G+ N+V +N+++ L + + M++ P++ +Y+I
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI 215
L +GL G EA + +++ L++ + + +
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 3/227 (1%)
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
+ED S+N L + R+ L + L +M G VPDI+ +LI G C+ G A +
Sbjct: 100 LEDVESNNHL-RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAK 158
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCN 326
+ E + SG P+++ YN +I+G CK DV+TYNT++ C+
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP--DVVTYNTILRSLCD 216
Query: 327 SGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYIT 386
SGK+ +A M + TY LI C+ + A +L+ M +G PD +T
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 387 YTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
Y +L+ K+ +E IK + M G P+ T+ ++ + G
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 225/436 (51%), Gaps = 8/436 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ A+ K+ +L + + K+G+ PN VT+N ++ CK+G++ A ++V E+
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV---EL 300
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDG-YSRAR 119
M ++ PD TYN LI G C G + +L + M + P+V TY TLIDG +
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVD-NRIPPDKFTY 178
SLE A +L ++M G+ N V +N + WL E E V+ + +VD + PD TY
Sbjct: 361 SLE-ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
L K + G+++ A + ++ + + + + N +++ LC+ L A LL S +
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXX 298
RG + D VT+G+LI G +E VE A++++++M K P + +NS+I GLC
Sbjct: 480 RGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTEL 539
Query: 299 XXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
L D T+N++I GYC G++++AF F ++ T N L+N
Sbjct: 540 AMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
LCK G ++A +I + V D +TY +I++F K +E L M KG+ P
Sbjct: 600 GLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEP 658
Query: 418 HKQTYKAVVSPLLQEG 433
+ TY + +S L+++G
Sbjct: 659 DRFTYNSFISLLMEDG 674
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 212/421 (50%), Gaps = 4/421 (0%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
A VF +K G+ NV TFN++++ C G ++ AL ++ +M +S + + PD++TYN
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERM--VSEFKVNPDNVTYNT 245
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
++ K G+L+ ++L +M + +VPN TY L+ GY + SL+EAF++ + M +
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
++ + YN +I+ L G M L+ +M ++ PD TY+ L G G EA
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 196 KFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY-VRGLVPDIVTFGSLIDG 254
K ++ + + + +HNI + +LC+ + + + + G PDIVT+ +LI
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN-LFD 313
+ K G++ A+++ +M + G K N + N++++ LCKE + D
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 314 VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
+TY TLI G+ K+++A MK I +T+N+LI LC G + A E
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 545
Query: 374 VMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ G +PD T+ +I + K+ E+ + ++ + P T +++ L +EG
Sbjct: 546 ELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 605
Query: 434 V 434
+
Sbjct: 606 M 606
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 220/438 (50%), Gaps = 9/438 (2%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+V Y + L S+ + +L P+ F++ + G +AL++ KM +
Sbjct: 101 LVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRL 160
Query: 62 SVYSIRPDSITYNCLIGGFCKMGK---LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRA 118
++P+ +T N L+ G + ++ A ++ ++M++ + NV+T+ L++GY
Sbjct: 161 K---LKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLE 217
Query: 119 RSLEEAFRLCDEMMKKGLV-MNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFT 177
LE+A + + M+ + V ++V YNT++ + +G + + L+ M N + P++ T
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
Y+ L G C+ G++ EAF+ + + N++ D ++NILIN LC + ++ +L+ +M
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
L PD+VT+ +LIDG + G A ++ E+M G K N V +N + LCKEE
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397
Query: 298 XXXXXXXXXXXMNLF--DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTL 355
M+ F D++TY+TLI Y G + A M GI N T NT+
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 356 INFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
++ LCK + +A L+ +GF+ D +TY LI F ++ E+ +++ D M +
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Query: 416 IPHKQTYKAVVSPLLQEG 433
P T+ +++ L G
Sbjct: 518 TPTVSTFNSLIGGLCHHG 535
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 185/410 (45%), Gaps = 41/410 (10%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++Y CK L EA + + + P++ T+N++I+ C G+M L++ M+
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL---MDA 335
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIV------------------ 102
M ++PD +TYN LI G ++G A KL E ME D V
Sbjct: 336 MKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM-EQMENDGVKANQVTHNISLKWLCKEE 394
Query: 103 -------------------PNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIY 143
P++ TY TLI Y + L A + EM +KG+ MN++
Sbjct: 395 KREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITL 454
Query: 144 NTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILE 203
NT++ L E ++ L++S D+ TY L G R V +A + ++ +
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 204 NNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVEN 263
+ + N LI LC A + + GL+PD TF S+I G+CKEG VE
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 264 AVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLING 323
A + Y + +K KP+ N ++NGLCKE D +TYNT+I+
Sbjct: 575 AFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISA 634
Query: 324 YCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
+C K+ EA+ M+ G+ + TYN+ I+ L + G + + EL+K
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 149/332 (44%), Gaps = 15/332 (4%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ +I A K L A+ + + GI N +T N I+D CK +D A +++
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
D +TY LI GF + K+ A ++ +EM + I P V T+ +LI G
Sbjct: 480 RGFIV---DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK 536
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
E A DE+ + GL+ + +N++I EG +E + + + PD +T +I
Sbjct: 537 TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNI 596
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GLC+ G +A F + ++E + D ++N +I+ C+ L A LL+ M +G
Sbjct: 597 LLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG 655
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L PD T+ S I ++G + ++ +K SG+ + S+ L E
Sbjct: 656 LEPDRFTYNSFISLLMEDGKLSETDELLKKF--SGK------FGSMKRDLQVETEKNPAT 707
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDE 332
+ I Y+ +I+ C+ G++ E
Sbjct: 708 SESKEELNT---EAIAYSDVIDELCSRGRLKE 736
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 116/266 (43%), Gaps = 36/266 (13%)
Query: 172 PPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR---SNNLSG 228
PP K + I G + A + K++ L + + N L+ L R S ++S
Sbjct: 128 PPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS 187
Query: 229 AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN 288
A+++ M G+ ++ TF L++G+C EG +E+A+ + E+M+ + +N
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK----------VN 237
Query: 289 GLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAAN 348
D +TYNT++ G++ + MK G+ N
Sbjct: 238 P-----------------------DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPN 274
Query: 349 HATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHD 408
TYN L+ CKLG +++A +++++M +PD TY ILI S E ++L D
Sbjct: 275 RVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMD 334
Query: 409 YMVLKGVIPHKQTYKAVVSPLLQEGV 434
M + P TY ++ + G+
Sbjct: 335 AMKSLKLQPDVVTYNTLIDGCFELGL 360
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 222/434 (51%), Gaps = 4/434 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ C ++ +A+S+ + ++ G P+ TFN +I + A+ +V +M
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM-- 212
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
V +PD +TY ++ G CK G + +A L +M + I P V Y T+ID ++
Sbjct: 213 -VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ +A L EM KG+ N V YN++I L G S L+S M++ +I P+ T+S
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + G + EA K + ++++ ++ D F+++ LIN C + L AK + M +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK-EEXXXXX 299
P++VT+ +LI G CK V+ ++++ +M + G N V Y ++I+G + E
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
L D++TY+ L++G CN+GK++ A ++ + + + TYN +I +
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
CK G ++ +L + L+G P+ +TYT +++ F +K EE L M +G +P
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571
Query: 420 QTYKAVVSPLLQEG 433
TY ++ L++G
Sbjct: 572 GTYNTLIRAHLRDG 585
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 204/408 (50%), Gaps = 4/408 (0%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
GI N+ T++++I+ C+ + LAL V++KM + PD +T N L+ GFC ++
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGY---EPDIVTLNSLLNGFCHGNRI 167
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
+ A L +M+E P+ T+ TLI G R EA L D M+ KG + V Y V
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
++ L GD++ L+ M +I P Y+ + LC NVN+A +++ +
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
+ ++N LI LC S A +LL+ M R + P++VTF +LID KEG + A +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYC 325
+Y++M+K P++ Y+S+ING C + + F +V+TYNTLI G+C
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
+ ++DE M G+ N TY TLI+ + A+ + K M+ G +PD +
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
TY+IL+ E + + +Y+ + P TY ++ + + G
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 208/422 (49%), Gaps = 39/422 (9%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I+ L + + EA+++ R + G P++VT+ ++++ CK G +DLAL ++ KME
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 61 --------------------------------MSVYSIRPDSITYNCLIGGFCKMGKLTM 88
M IRP+ +TYN LI C G+ +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A +L ++M+E+ I PNV T++ LID + + L EA +L DEM+K+ + + Y+++I+
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
+ ++ + M+ P+ TY+ L KG C+ V+E + ++ + L+
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
+ ++ LI+ ++ A+ + M G++PDI+T+ L+DG C G VE A+ V+
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 269 EKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVITYNTLINGY 324
E + +S +P++ YN +I G+CK E+ N V+TY T+++G+
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN---VVTYTTMMSGF 546
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
C G +EA A MK G + TYNTLI + G + EL++ M FV D
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 606
Query: 385 IT 386
T
Sbjct: 607 ST 608
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 171/334 (51%), Gaps = 3/334 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I LC + +A + ++ I PNVVTF+ +ID K G + A K+ +M
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-- 352
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
SI PD TY+ LI GFC +L A+ + M+ KD PNV TY TLI G+ +A+
Sbjct: 353 -IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++E L EM ++GLV N+V Y T+IH + + + ++ MV + + PD TYSI
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GLC NG V A + + + D +++NI+I +C++ + L S+ ++G
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ P++VT+ +++ G C++G E A ++ +M + G P+ YN++I ++
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAF 334
+ L+ + G++D++F
Sbjct: 592 ELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSF 625
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 195/423 (46%), Gaps = 39/423 (9%)
Query: 10 ECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPD 69
+ KL +A+++F +K +P++V F+ ++ KM DL V+S E M I +
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL---VISLGEQMQNLGISHN 115
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
TY+ LI FC+ +L++A + +MM+ P++ T +L++G+ + +A L
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
+M++ G PD FT++ L GL R+
Sbjct: 176 QMVEMGY-----------------------------------QPDSFTFNTLIHGLFRHN 200
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
+EA +++ D ++ I++N LC+ ++ A LL M + P +V +
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM 309
++ID C NV +A+ ++ +M G +PN+V YNS+I LC
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 310 NL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
+ +V+T++ LI+ + GK+ EA M I + TY++LIN C + +A
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 369 KELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSP 428
K + ++MI + P+ +TY LI F K +E ++L M +G++ + TY ++
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 429 LLQ 431
Q
Sbjct: 441 FFQ 443
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 1/219 (0%)
Query: 216 LINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
L++ + + N L M G+ ++ T+ LI+ C+ + A+ V KMMK G
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 276 EKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAF 334
+P++V NS++NG C M D T+NTLI+G + EA
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 335 AFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
A M G + TY ++N LCK G I A L+K M P + Y +I +
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 395 SKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ + + L M KG+ P+ TY +++ L G
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 219/438 (50%), Gaps = 11/438 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ LCK+ + E + + +K G+ PN+ T+N+ I C+ G +D A+++V
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG---C 276
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ +PD ITYN LI G CK K AE +M+ + + P+ TY TLI GY +
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ A R+ + + G V + Y ++I L EG+ L + + I P+ Y+
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L KGL G + EA + +++ E LI + + NIL+N LC+ +S A L+ M +G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK----EEXX 296
PDI TF LI G+ + +ENA+++ + M+ +G P++ YNS++NGLCK E+
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 297 XXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
NLF T+N L+ C K+DEA MKN + + T+ TLI
Sbjct: 517 ETYKTMVEKGCAPNLF---TFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYI-TYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
+ CK G + A L + M V TY I+I +F++K + KL MV + +
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 416 IPHKQTYKAVVSPLLQEG 433
P TY+ +V + G
Sbjct: 634 GPDGYTYRLMVDGFCKTG 651
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 211/422 (50%), Gaps = 4/422 (0%)
Query: 9 KECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRP 68
++ K+ EA++VF R + P V ++N I+ V G D A KV +M I P
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR---GITP 144
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
D ++ + FCK + A +L N M + NV Y T++ G+ E + L
Sbjct: 145 DVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
+M+ G+ + +N ++ L +GD++ L+ ++ + P+ FTY++ +GLC+
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
G ++ A + ++E D ++N LI LC+++ A+ L M GL PD T+
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
+LI G+CK G V+ A ++ + +G P+ Y S+I+GLC E
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 309 MNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQ 367
+ +VI YNTLI G N G I EA + M G+ T+N L+N LCK+G +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 368 AKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
A L+KVMI +G+ PD T+ ILI +S + E +++ D M+ GV P TY ++++
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 428 PL 429
L
Sbjct: 505 GL 506
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 194/426 (45%), Gaps = 48/426 (11%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +IY LCK K EA + + G+ P+ T+N +I CK G + LA ++V
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD--- 346
Query: 61 MSVYS-IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+V++ PD TY LI G C G+ A L NE + K I PNV Y TLI G S
Sbjct: 347 -AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 120 SLEEAFRLCDEMMKKGLV---------------MNSV--------------------IYN 144
+ EA +L +EM +KGL+ M V +N
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 145 TVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
+IH + ME ++ M+DN + PD +TY+ L GLC+ + + + ++E
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 205 NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA 264
+ F+ NIL+ LCR L A LL M + + PD VTFG+LIDG CK G+++ A
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 265 VQVYEKMMK----SGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNT 319
++ KM + S P YN +I+ ++ L D TY
Sbjct: 586 YTLFRKMEEAYKVSSSTPT---YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRL 642
Query: 320 LINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQG 379
+++G+C +G ++ + F M G + T +IN LC + +A ++ M+ +G
Sbjct: 643 MVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Query: 380 FVPDYI 385
VP+ +
Sbjct: 703 LVPEAV 708
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 149/348 (42%), Gaps = 8/348 (2%)
Query: 88 MAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVI 147
M E + N M+E Y + Y R ++EA + + M YN ++
Sbjct: 66 MRENVGNHMLEG-------VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIM 118
Query: 148 HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI 207
L G + + M D I PD ++++I K C+ + A + + +
Sbjct: 119 SVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCE 178
Query: 208 EDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQV 267
+ ++ ++ N + +L M G+ + TF L+ CK+G+V+ ++
Sbjct: 179 MNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL 238
Query: 268 YEKMMKSGEKPNLVLYNSVINGLCKE-EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCN 326
+K++K G PNL YN I GLC+ E DVITYN LI G C
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 298
Query: 327 SGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYIT 386
+ K EA + M N G+ + TYNTLI CK G +Q A+ ++ + GFVPD T
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 387 YTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
Y LI + + L + + KG+ P+ Y ++ L +G+
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 206/391 (52%), Gaps = 6/391 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++++ ALCKE K+ +A + R + G+ PN V +N +ID C+ G + + K+E
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL---VGARMKIEA 414
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M ++PD + YNCLI FC++G++ AEK N+M K + P+V TY LI GY R
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ F + EM G + N V Y T+I+ L + ++ M D + P Y++
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C G + +AF+F ++L+ + + ++N LI+ L + LS A+ LL + +G
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L PD+ T+ SLI G+ GNV+ + +YE+M +SG KP L Y+ +I+ LC +E
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTE 653
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
D++ YN +++ Y G +++AF M I + TYN+LI
Sbjct: 654 RLFGEMSLKP--DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILI 391
K+G + + + L+ M + P+ TY I++
Sbjct: 712 KVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 219/436 (50%), Gaps = 4/436 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+I LCK ++ +A +F L + P+++T+N +ID CK G + + KV E
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV---RER 274
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M I P IT+N L+ G K G + AE + EM + VP+ T++ L DGYS
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
E A + + + G+ MN+ + +++ L EG +E ++ + + P++ Y+
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ G CR G++ A + + + D ++N LI C + A++ + M ++G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ P + T+ LI G+ ++ + + ++M +G PN+V Y ++IN LCK
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ V YN LI+G C+ GKI++AF FS M GI N TYNTLI+ L
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
G + +A++L+ + +G PD TY LI+ + + + I L++ M G+ P
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 420 QTYKAVVSPLLQEGVE 435
+TY ++S +EG+E
Sbjct: 635 KTYHLLISLCTKEGIE 650
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 185/430 (43%), Gaps = 40/430 (9%)
Query: 2 VVIYALCKECKLL-EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+++ L E K++ EA +F+ GI+P+ + +++D K + + V + +
Sbjct: 113 LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVF--LNI 170
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ RP Y I K+ + +L N M I P+V Y LIDG
Sbjct: 171 LES-DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDG------ 223
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
LC KG MN L M+ R+ P TY+
Sbjct: 224 ------LC-----KGKRMNDA------------------EQLFDEMLARRLLPSLITYNT 254
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C+ GN ++FK ++ +++ + N L+ L ++ + A+ +L M G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
VPD TF L DG+ E A+ VYE + SG K N + ++N LCKE
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
L + + YNT+I+GYC G + A AM+ G+ +H YN LI
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
C+LG ++ A++ + M L+G P TY ILI + +K ++ + M G +P+
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 420 QTYKAVVSPL 429
+Y +++ L
Sbjct: 495 VSYGTLINCL 504
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 178/405 (43%), Gaps = 43/405 (10%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I C++ L+ A K G+ P+ + +N +I C++G M+ A K V+KM++
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 61 MSVYSIRPDSITYNCLIGGF-----------------------------------CKMGK 85
V P TYN LIGG+ CK K
Sbjct: 453 KGV---SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 86 LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNT 145
L A+ +K +M ++ + P VR Y LIDG +E+AFR EM+KKG+ +N V YNT
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
+I L + G + L+ + + PD FTY+ L G GNV + ++ +
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
+ ++++LI+ LC + ++L M L PD++ + ++ + G++E A
Sbjct: 630 IKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAF 685
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGY 324
+ ++M++ + YNS+I G K + + TYN ++ G+
Sbjct: 686 NLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGH 745
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
C A+ + M+ G + N L++ L + ++A+
Sbjct: 746 CEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAE 790
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 131/307 (42%), Gaps = 39/307 (12%)
Query: 1 NVVIYA-----LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
NVV Y LCK KLLEA V G+ P V +NM+ID C G ++ A +
Sbjct: 493 NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS 552
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
+M I + +TYN LI G GKL+ AE L E+ K + P+V TY +LI GY
Sbjct: 553 KEM---LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 116 SRARSLEEAFRLCDEMMKKG-------------------------------LVMNSVIYN 144
A +++ L +EM + G L + ++YN
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYN 669
Query: 145 TVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
V+H V GDME L M++ I DK TY+ L G + G + E ++
Sbjct: 670 GVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729
Query: 205 NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA 264
+ +A ++NI++ C + A M +G + D+ L+ G +E + A
Sbjct: 730 EMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Query: 265 VQVYEKM 271
V +M
Sbjct: 790 EIVISEM 796
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 39/241 (16%)
Query: 194 AFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLID 253
AF S L+++ FS+ +L L S +S A L ++ G+ P + L+D
Sbjct: 98 AFSLSSPSLKHD-----FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLD 152
Query: 254 GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD 313
K + V+ +++S +P+ +Y I K L D
Sbjct: 153 HLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVK------------------LSD 194
Query: 314 VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
V GK E F MK+ I + YN LI+ LCK + A++L
Sbjct: 195 V-------------GKGLELFN---RMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 374 VMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
M+ + +P ITY LI + K +PE+ K+ + M + P T+ ++ L + G
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 434 V 434
+
Sbjct: 299 M 299
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 203/389 (52%), Gaps = 7/389 (1%)
Query: 6 ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYS 65
LCK ++ A +FYR K P +V FN +I G +D A V+S M ++ Y
Sbjct: 331 GLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDM--VTSYG 384
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
I PD TYN LI G+ K G + +A ++ ++M K PNV +Y L+DG+ + ++EA+
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
+ +EM GL N+V +N +I E + + M PD +T++ L GL
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
C + A ++ ++ + ++N LIN R + A++L+ M +G D
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXX 305
+T+ SLI G C+ G V+ A ++EKM++ G P+ + N +INGLC+
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 306 XXXM-NLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGH 364
+ D++T+N+LING C +G+I++ ++ GI + T+NTL+++LCK G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 365 IQQAKELMKVMILQGFVPDYITYTILITS 393
+ A L+ I GFVP++ T++IL+ S
Sbjct: 685 VYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 226/436 (51%), Gaps = 11/436 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+I++L K ++ EA+ + G P+ TFN +I CK ++ A K+V++M
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM-- 313
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ PD ITY L+ G CK+G++ A+ L + + +IV + TLI G+
Sbjct: 314 -LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV----IFNTLIHGFVTHGR 368
Query: 121 LEEAFRLCDEMMKK-GLVMNSVIYNTVIHWLYVEGDMEGVSL-LISSMVDNRIPPDKFTY 178
L++A + +M+ G+V + YN++I+ + EG + G++L ++ M + P+ ++Y
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG-LVGLALEVLHDMRNKGCKPNVYSY 427
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+IL G C+ G ++EA+ +++ + L + N LI+ C+ + + A ++ M
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE-EXXX 297
+G PD+ TF SLI G C+ +++A+ + M+ G N V YN++IN + E
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 298 XXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
+ D ITYN+LI G C +G++D+A + M G A ++ + N LIN
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
LC+ G +++A E K M+L+G PD +T+ LI + E+ + + + +G+ P
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667
Query: 418 HKQTYKAVVSPLLQEG 433
T+ ++S L + G
Sbjct: 668 DTVTFNTLMSWLCKGG 683
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 201/434 (46%), Gaps = 42/434 (9%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
VV+ A C ++ A+S+ KHG PN V + +I K ++ AL+++ +M +M
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
PD+ T+N +I G CK ++ A K+ N M+ + P+ TY L++G + +
Sbjct: 282 GCV---PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNR-IPPDKFTYSI 180
+ A L + K +V I+NT+IH G ++ ++S MV + I PD TY+
Sbjct: 339 DAAKDLFYRIPKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G + G V A + + + +S+ IL++ C+ + A +L M G
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L P+ V F LI CKE + AV+++ +M + G KP
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP---------------------- 492
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
DV T+N+LI+G C +I A M + G+ AN TYNTLIN
Sbjct: 493 ------------DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
+ G I++A++L+ M+ QG D ITY LI + ++ L + M+ G P
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 421 TYKAVVSPLLQEGV 434
+ +++ L + G+
Sbjct: 601 SCNILINGLCRSGM 614
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 160/329 (48%), Gaps = 38/329 (11%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +IY KE + A+ V + G PNV ++ +++D CK+G +D A V+++M
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM-- 450
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S ++P+++ +NCLI FCK ++ A ++ EM K P+V T+ +LI G
Sbjct: 451 -SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS- 179
++ A L +M+ +G+V N+V YNT+I+ G+++ L++ MV P D+ TY+
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 180 ----------------------------------ILTKGLCRNGNVNEAFKFHSKILENN 205
IL GLCR+G V EA +F +++
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
D + N LIN LCR+ + + + G+ PD VTF +L+ CK G V +A
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
+ ++ ++ G PN ++ ++ + +E
Sbjct: 690 LLLDEGIEDGFVPNHRTWSILLQSIIPQE 718
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 184/397 (46%), Gaps = 21/397 (5%)
Query: 48 MDLALKVVSKMEVMSVYS----IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVP 103
++L L V + ME+ S R Y LIG G+ ++L +M ++ IV
Sbjct: 85 LELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVF 144
Query: 104 NVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSL-L 162
+ +++ Y +A + RL EM + V+ + V G+ V+ +
Sbjct: 145 KESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANV 204
Query: 163 ISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR 222
M+ +IPP FT+ ++ K C ++ A + ++ + ++ + LI+ L +
Sbjct: 205 FYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSK 264
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVL 282
N ++ A QLL M++ G VPD TF +I G CK + A ++ +M+ G P+ +
Sbjct: 265 CNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDIT 324
Query: 283 YNSVINGLCKEEXXXXXXXXXXXXXXMNLF------DVITYNTLINGYCNSGKIDEAFA- 335
Y ++NGLCK +LF +++ +NTLI+G+ G++D+A A
Sbjct: 325 YGYLMNGLCK---------IGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 336 FSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFS 395
S + + GI + TYN+LI K G + A E++ M +G P+ +YTIL+ F
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 396 KKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
K +E + + M G+ P+ + ++S +E
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I LC+ + EA+ + G P++VTFN +I+ C+ G ++ L + K++
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
I PD++T+N L+ CK G + A L +E +E VPN RT++ L+ +
Sbjct: 663 ---EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQET 719
Query: 121 LEE 123
L+
Sbjct: 720 LDR 722
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 219/431 (50%), Gaps = 6/431 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ LC K+ +A+ + R ++ G PN VT+ +++V CK G LA++++ KME
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+I+ D++ Y+ +I G CK G L A L NEM K ++ TY TLI G+ A
Sbjct: 257 ---RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ +L +M+K+ + N V ++ +I EG + L+ M+ I P+ TY+
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C+ + EA + ++ D + NILIN C++N + +L M +RG
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK--EEXXXX 298
++ + VT+ +L+ G C+ G +E A +++++M+ +P++V Y +++GLC E
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 299 XXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
M L D+ Y +I+G CN+ K+D+A+ ++ G+ + YN +I+
Sbjct: 494 EIFGKIEKSKMEL-DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISE 552
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
LC+ + +A L + M +G PD +TY ILI + +L + M G
Sbjct: 553 LCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPAD 612
Query: 419 KQTYKAVVSPL 429
T K V++ L
Sbjct: 613 VSTVKMVINML 623
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 198/405 (48%), Gaps = 16/405 (3%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
++ ALCK+ + GI ++ T +++I+ C+ + A + K+ +
Sbjct: 106 LVLALCKQME------------SKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLG 153
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
PD++ +N L+ G C +++ A +L + M+E P + T TL++G +
Sbjct: 154 Y---EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+A L D M++ G N V Y V++ + G L+ M + I D YSI+
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
GLC++G+++ AF +++ D ++N LI C + +LL M R +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
P++VTF LID KEG + A Q+ ++MM+ G PN + YNS+I+G CKE
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 303 XXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
D++T+N LINGYC + +ID+ M G+ AN TYNTL+ C+
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKL 406
G ++ AK+L + M+ + PD ++Y IL+ E+ +++
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 221/437 (50%), Gaps = 4/437 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ LC EC++ EA+ + R ++ G P ++T N +++ C G + A+ ++ +M
Sbjct: 162 NTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM-- 219
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+P+ +TY ++ CK G+ +A +L +M E++I + Y+ +IDG + S
Sbjct: 220 -VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L+ AF L +EM KG + + YNT+I G + + L+ M+ +I P+ T+S+
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + G + EA + ++++ + + ++N LI+ C+ N L A Q++ M +G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
PDI+TF LI+G+CK +++ ++++ +M G N V YN+++ G C+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ D+++Y L++G C++G++++A ++ + + + Y +I+ +
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
C + A +L + L+G D Y I+I+ +K S + L M +G P +
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 420 QTYKAVVSPLLQEGVET 436
TY ++ L + T
Sbjct: 579 LTYNILIRAHLGDDDAT 595
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 201/421 (47%), Gaps = 6/421 (1%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSV-YSIRPDSITY 73
+A+ +F ++ P V+ FN + K +L L + +ME + +SI SI
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 74 NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK 133
NC FC+ KL+ A ++M+ P+ + TL++G + EA L D M++
Sbjct: 131 NC----FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 134 KGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNE 193
G + NT+++ L + G + +LI MV+ P++ TY + +C++G
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 194 AFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLID 253
A + K+ E N+ DA ++I+I+ LC+ +L A L M ++G DI+T+ +LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 254 GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF- 312
G C G ++ ++ M+K PN+V ++ +I+ KE +
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
+ ITYN+LI+G+C +++EA M + G + T+N LIN CK I EL
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
+ M L+G + + +TY L+ F + E KL MV + V P +YK ++ L
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 433 G 433
G
Sbjct: 487 G 487
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 208/433 (48%), Gaps = 4/433 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+++I C+ KL A S + +K G P+ V FN +++ C + AL++V +M
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M +P IT N L+ G C GK++ A L + M+E PN TY +++ ++
Sbjct: 187 MGH---KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
A L +M ++ + +++V Y+ +I L +G ++ L + M D TY+
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C G ++ K +++ + + + ++LI+ + L A QLL M RG
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ P+ +T+ SLIDG CKE +E A+Q+ + M+ G P+++ +N +ING CK
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ + +TYNTL+ G+C SGK++ A M + + + +Y L++ L
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
C G +++A E+ + D Y I+I ++ L + LKGV
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 420 QTYKAVVSPLLQE 432
+ Y ++S L ++
Sbjct: 544 RAYNIMISELCRK 556
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 152/294 (51%), Gaps = 3/294 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+V+I + KE KL EA + ++ GI PN +T+N +ID CK ++ A+++V ++
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV---DL 393
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M PD +T+N LI G+CK ++ +L EM + ++ N TY TL+ G+ ++
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
LE A +L EM+ + + + V Y ++ L G++E + + +++ D Y I
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ G+C V++A+ + + DA ++NI+I+ LCR ++LS A L M G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
PD +T+ LI H + + A ++ E+M SG ++ VIN L E
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGE 627
>AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6814521-6816404 FORWARD
Length = 627
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 209/429 (48%), Gaps = 40/429 (9%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I LCKE KL +A GI P +VT+N ++ G ++ A ++S+M+
Sbjct: 229 NIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS 288
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+PD TYN ++ C G+ A ++ EM E +VP+ +Y LI G S
Sbjct: 289 KG---FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
LE AF DEM+K+G+V YNT+IH L++E +E +LI + + I D TY+I
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C++G+ +AF H +++ + + F++ LI LCR N A +L + +G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ PD+V +L+DGHC GN++ A + ++M P+ V YN ++ GLC E
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE------- 515
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
GK +EA MK GI +H +YNTLI+
Sbjct: 516 ---------------------------GKFEEARELMGEMKRRGIKPDHISYNTLISGYS 548
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
K G + A + M+ GF P +TY L+ SK E +L M +G++P+
Sbjct: 549 KKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDS 608
Query: 421 TYKAVVSPL 429
++ +V+ +
Sbjct: 609 SFCSVIEAM 617
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 220/436 (50%), Gaps = 9/436 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++++ C+ + EA+ FY + G +P T N I+ + ++ ++ A + M
Sbjct: 159 DLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYR 218
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M I+ + T+N +I CK GKL A+ M I P + TY TL+ G+S
Sbjct: 219 ME---IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+E A + EM KG + YN ++ W+ EG S ++ M + + PD +Y+I
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNI 332
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L +G NG++ AF + ++++ ++ +++N LI+ L N + A+ L+ + +G
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+V D VT+ LI+G+C+ G+ + A ++++MM G +P Y S+I LC++
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 301 XXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ D++ NTL++G+C G +D AF+ M I + TYN L+ L
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
C G ++A+ELM M +G PD+I+Y LI+ +SKK + + D M+ G P
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 420 QTYKAVVSPLL--QEG 433
TY A++ L QEG
Sbjct: 573 LTYNALLKGLSKNQEG 588
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 120/284 (42%), Gaps = 37/284 (13%)
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
+ +L + C+ V+EA + + E + N ++ L R N + A A MY
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING-------- 289
+ ++ TF +I+ CKEG ++ A M G KP +V YN+++ G
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 290 ---------------------------LCKEEXXXXXXXXXXXXXXMNLFDVITYNTLIN 322
+C E + D ++YN LI
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVP--DSVSYNILIR 335
Query: 323 GYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
G N+G ++ AFA+ M G+ TYNTLI+ L I+ A+ L++ + +G V
Sbjct: 336 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL 395
Query: 383 DYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
D +TY ILI + + ++ LHD M+ G+ P + TY +++
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 201/398 (50%), Gaps = 4/398 (1%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
P+V +N +I+ CKM +D A +V+ +M PD++TYN +IG C GKL +A
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKD---FSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
K+ N+++ + P V TY LI+ ++EA +L DEM+ +GL + YNT+I
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
+ EG ++ ++ ++ PD +Y+IL + L G E K +K+ +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
+++ILI LCR + A LL M +GL PD ++ LI C+EG ++ A++ E
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 270 KMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSG 328
M+ G P++V YN+V+ LCK + + +YNT+ + +SG
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 329 KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYT 388
A M + GI + TYN++I+ LC+ G + +A EL+ M F P +TY
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 389 ILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
I++ F K E+ I + + MV G P++ TY ++
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 202/412 (49%), Gaps = 4/412 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I CK ++ +A V R P+ VT+N++I C G +DLALKV+++
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ--- 218
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ + +P ITY LI G + A KL +EM+ + + P++ TY T+I G +
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ AF + + KG + + YN ++ L +G E L++ M + P+ TYSI
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L LCR+G + EA + E L DA+S++ LI CR L A + L +M G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+PDIV + +++ CK G + A++++ K+ + G PN YN++ + L
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 301 XXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ D ITYN++I+ C G +DEAF M++ + TYN ++
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV 411
CK I+ A +++ M+ G P+ TYT+LI E ++L + +V
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 165/357 (46%), Gaps = 8/357 (2%)
Query: 81 CKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNS 140
C+ G + L M+ K P+V LI G+ R++ +A R+ E+++K +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 141 VIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSK 200
YN +I+ ++ + ++ M PD TY+I+ LC G ++ A K ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 201 ILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGN 260
+L +N ++ ILI + A +L+ M RGL PD+ T+ ++I G CKEG
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 261 VENAVQVYEKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVIT 316
V+ A ++ + G +P+++ YN ++ L EE N V+T
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN---VVT 335
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
Y+ LI C GKI+EA MK G+ + +Y+ LI C+ G + A E ++ MI
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 377 LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
G +PD + Y ++ + K ++ +++ + G P+ +Y + S L G
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%)
Query: 256 CKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVI 315
C+ GN ++ + E M++ G P+++L +I G DV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 316 TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM 375
YN LING+C +ID+A M++ + + TYN +I LC G + A +++ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 376 ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
+ P ITYTILI + + +E +KL D M+ +G+ P TY ++ + +EG+
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 8/231 (3%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I A C+E +L A+ + G P++V +N ++ CK G D AL++ K+ +
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
P+S +YN + G A + EMM I P+ TY ++I R ++
Sbjct: 434 C---SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
EAF L +M + V YN V+ +E ++ SMV N P++ TY++L
Sbjct: 491 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI-----LINYLCRSNNLSG 228
+G+ G EA + + ++ + I + + L+N L RS+ G
Sbjct: 551 EGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPLLNVLQRSSQTFG 601
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 217/434 (50%), Gaps = 4/434 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I C+ CK A SV + +K G P+ TFN +I G + A+ +V +M
Sbjct: 117 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-- 174
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+PD +TYN ++ G C+ G ++A L +M E+++ +V TY+T+ID R
Sbjct: 175 -VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 233
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ A L EM KG+ + V YN+++ L G +LL+ MV I P+ T+++
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + G + EA + + +++ + + ++N L++ C N LS A +L M
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
PDIVTF SLI G+C V++ ++V+ + K G N V Y+ ++ G C+
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ DV+TY L++G C++GK+++A ++ + + Y T+I +
Sbjct: 414 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 473
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
CK G ++ A L + +G P+ +TYT++I+ KK S E L M G P+
Sbjct: 474 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 533
Query: 420 QTYKAVVSPLLQEG 433
TY ++ L++G
Sbjct: 534 CTYNTLIRAHLRDG 547
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 216/433 (49%), Gaps = 51/433 (11%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I L E K+ EA+ + R +++G P+VVT+N I++ C+ G LAL ++ KME
Sbjct: 152 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 211
Query: 61 MSV------YSIRPDS--------------------------ITYNCLIGGFCKMGKLTM 88
+V YS DS +TYN L+ G CK GK
Sbjct: 212 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 271
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
L +M+ ++IVPNV T+ L+D + + L+EA L EM+ +G+ N + YNT++
Sbjct: 272 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 331
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
++ + + ++ MV N+ PD T++ L KG C V++ K I + L+
Sbjct: 332 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 391
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
+A +++IL+ C+S + A++L M G++PD++T+G L+DG C G +E A++++
Sbjct: 392 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 451
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF----------DVITYN 318
E + KS +V+Y ++I G+CK NLF +V+TY
Sbjct: 452 EDLQKSKMDLGIVMYTTIIEGMCK---------GGKVEDAWNLFCSLPCKGVKPNVMTYT 502
Query: 319 TLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
+I+G C G + EA M+ G A N TYNTLI + G + + +L++ M
Sbjct: 503 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 562
Query: 379 GFVPDYITYTILI 391
GF D + ++I
Sbjct: 563 GFSADASSIKMVI 575
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 193/395 (48%), Gaps = 4/395 (1%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
+A+++F ++ P++V F+ + +L L ++E+ I + T N
Sbjct: 61 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLEL---NGIAHNIYTLN 117
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
+I FC+ K A + ++M+ P+ T+ TLI G + EA L D M++
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
G + V YN++++ + GD L+ M + + D FTYS + LCR+G ++ A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
++ + ++N L+ LC++ + LL M R +VP+++TF L+D
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-D 313
KEG ++ A ++Y++M+ G PN++ YN++++G C + D
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357
Query: 314 VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
++T+ +LI GYC ++D+ + G+ AN TY+ L+ C+ G I+ A+EL +
Sbjct: 358 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 417
Query: 374 VMILQGFVPDYITYTILITSFSKKCSPEEVIKLHD 408
M+ G +PD +TY IL+ E+ +++ +
Sbjct: 418 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 452
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 133/253 (52%), Gaps = 3/253 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ C + +L EA ++ +++ P++VTF +I C + +D +KV +
Sbjct: 327 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI-- 384
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S + +++TY+ L+ GFC+ GK+ +AE+L EM+ ++P+V TY L+DG
Sbjct: 385 -SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 443
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
LE+A + +++ K + + V+Y T+I + G +E L S+ + P+ TY++
Sbjct: 444 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 503
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ GLC+ G+++EA K+ E+ + ++N LI R +L+ + +L+ M G
Sbjct: 504 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 563
Query: 241 LVPDIVTFGSLID 253
D + +ID
Sbjct: 564 FSADASSIKMVID 576
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 114/230 (49%), Gaps = 8/230 (3%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I C ++ + M VF K G+ N VT+++++ C+ G + LA ++ +M
Sbjct: 364 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM---V 420
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
+ + PD +TY L+ G C GKL A ++ ++ + + + Y T+I+G + +E
Sbjct: 421 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 480
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+A+ L + KG+ N + Y +I L +G + ++L+ M ++ P+ TY+ L
Sbjct: 481 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 540
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQL 232
+ R+G++ + K ++ DA S ++I+ L LS K+L
Sbjct: 541 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-----LSAMKRL 585
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 76/173 (43%), Gaps = 1/173 (0%)
Query: 262 ENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTL 320
++A+ ++++M++S P+LV ++ + + + + + ++ T N +
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 321 INGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGF 380
IN +C K A++ + G + T+NTLI L G + +A L+ M+ G
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 381 VPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
PD +TY ++ + + L M + V TY ++ L ++G
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 232
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 212/423 (50%), Gaps = 6/423 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N VI LCK K A VF L+ G+ P+ T+ ++ ACK G + KV S M
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
V PD + ++ ++ F + G L A N + E ++P+ Y LI GY R
Sbjct: 369 RDVV---PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ A L +EM+++G M+ V YNT++H L + L + M + + PD +T +I
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C+ GN+ A + K+ E + D ++N L++ + ++ AK++ A M +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
++P +++ L++ C +G++ A +V+++M+ KP +++ NS+I G C+
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMK--NAGIAANHATYNTLIN 357
D I+YNTLI G+ + +AF M+ G+ + TYN++++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
C+ +++A+ +++ MI +G PD TYT +I F + + E ++HD M+ +G P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Query: 418 HKQ 420
+
Sbjct: 726 DDK 728
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 219/429 (51%), Gaps = 6/429 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ ALCK+ K+ + + + + G++P++VT+N +I G M+ A ++ M
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL---MNA 295
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M P TYN +I G CK GK A+++ EM+ + P+ TY +L+ +
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ E ++ +M + +V + V +++++ G+++ + +S+ + + PD Y+I
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L +G CR G ++ A +++L+ D ++N +++ LC+ L A +L M R
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L PD T LIDGHCK GN++NA+++++KM + + ++V YN++++G K
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 301 XXXXXXXXMNLFDV-ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ I+Y+ L+N C+ G + EAF M + I N++I
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLK--GVIP 417
C+ G+ + ++ MI +GFVPD I+Y LI F ++ + + L M + G++P
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 418 HKQTYKAVV 426
TY +++
Sbjct: 656 DVFTYNSIL 664
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 201/418 (48%), Gaps = 4/418 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+++I + KL EA F G ++ N +I ++G ++LA V ++
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI-- 226
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S + + T N ++ CK GK+ +++ EK + P++ TY TLI YS
Sbjct: 227 -SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+EEAF L + M KG YNTVI+ L G E + + M+ + + PD TY
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L C+ G+V E K S + +++ D + +++ RS NL A S+ G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L+PD V + LI G+C++G + A+ + +M++ G ++V YN++++GLCK +
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
LF D T LI+G+C G + A MK I + TYNTL++
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
K+G I AKE+ M+ + +P I+Y+IL+ + K E ++ D M+ K + P
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 160/359 (44%), Gaps = 2/359 (0%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
DS+ ++ LI + + KL A + + K ++ LI R +E A+ +
Sbjct: 165 DSV-FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
E+ + G+ +N N +++ L +G ME V +S + + + PD TY+ L
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
G + EAF+ + + +++N +IN LC+ AK++ A M GL PD T+
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
SL+ CK+G+V +V+ M P+LV ++S+++ +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 309 MNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQ 367
L D + Y LI GYC G I A M G A + TYNT+++ LCK + +
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 368 AKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
A +L M + PD T TILI K + + ++L M K + TY ++
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 39/264 (14%)
Query: 176 FTYSI-----LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
FT SI L L R G V A+ + +I + + + ++ NI++N LC+ +
Sbjct: 196 FTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVG 255
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
L+ + +G+ PDIVT+ +LI + +G +E A ++ M G P
Sbjct: 256 TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPG----------- 304
Query: 291 CKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHA 350
V TYNT+ING C GK + A M +G++ +
Sbjct: 305 -----------------------VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 351 TYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYM 410
TY +L+ CK G + + +++ M + VPD + ++ +++ F++ + ++ + + +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 411 VLKGVIPHKQTYKAVVSPLLQEGV 434
G+IP Y ++ ++G+
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGM 425
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 201 bits (510), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 207/408 (50%), Gaps = 7/408 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+I+ L K EA+++ R ++ G PN+VT+ ++++ CK G DLAL +++KME
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
I D + +N +I CK + A L EM K I PNV TY++LI
Sbjct: 255 ---KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+A +L +M++K + N V +N +I EG L M+ I PD FTY+ L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
G C + +++A + ++ + D ++N LI C+S + +L M RGL
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
V D VT+ +LI G +G+ +NA +V+++M+ G P+++ Y+ +++GLC
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491
Query: 302 XXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
+ D+ Y T+I G C +GK+D+ + ++ G+ N TYNT+I+ LC
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK---KCSPEEVIK 405
+Q+A L+K M G +P+ TY LI + + K + E+I+
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 213/437 (48%), Gaps = 39/437 (8%)
Query: 10 ECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPD 69
+ KL +A+ +F +K P++V FN ++ KM D+ + + KM+ + +
Sbjct: 63 DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH---G 119
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
TYN LI FC+ ++++A L +MM+ P++ T ++L++GY + + +A L D
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
+M++ G +++ + T+IH L++ L+ MV P+ TY ++ GLC+ G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 190 NVN---------EAFKFHSKILENNLIEDAF--------------------------SHN 214
+ + EA K + ++ N I D+ +++
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
LI+ LC S A QLL+ M + + P++VTF +LID KEG A ++Y+ M+K
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 275 GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEA 333
P++ YNS++NG C + + F DV+TYNTLI G+C S ++++
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 334 FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
M + G+ + TY TLI L G A+++ K M+ G PD +TY+IL+
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 394 FSKKCSPEEVIKLHDYM 410
E+ +++ DYM
Sbjct: 480 LCNNGKLEKALEVFDYM 496
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 220/469 (46%), Gaps = 39/469 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I C+ ++ A+++ + +K G P++VT + +++ C + A+ +V +M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 61 MSVYSIRPDSITYNCLI-----------------------------------GGFCKMGK 85
M RPD+IT+ LI G CK G
Sbjct: 184 MGY---RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 86 LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNT 145
+A L N+M I +V + T+ID + R +++A L EM KG+ N V Y++
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
+I L G S L+S M++ +I P+ T++ L + G EA K + +++ +
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
+ D F++N L+N C + L AKQ+ M + PD+VT+ +LI G CK VE+
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGY 324
+++ +M G + V Y ++I GL + + D++TY+ L++G
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
CN+GK+++A M+ + I + Y T+I +CK G + +L + L+G P+
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 385 ITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+TY +I+ K +E L M G +P+ TY ++ L++G
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 178/366 (48%), Gaps = 32/366 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
N +I +LCK + +A+++F GI PNVVT++ +I C G A +++S M
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 59 ------------------------EVMSVY------SIRPDSITYNCLIGGFCKMGKLTM 88
E +Y SI PD TYN L+ GFC +L
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A+++ M+ KD P+V TY TLI G+ +++ +E+ L EM +GLV ++V Y T+I
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
L+ +GD + + MV + +PPD TYSIL GLC NG + +A + + ++ +
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D + + +I +C++ + L S+ ++G+ P++VT+ ++I G C + ++ A +
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG 328
+KM + G PN YN++I ++ + L+ + G
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
Query: 329 KIDEAF 334
++D++F
Sbjct: 624 RLDKSF 629
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 219/435 (50%), Gaps = 7/435 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ LC K+ +A+ + R ++ G PN VT+ ++ V CK G LA++++ KME
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
I+ D++ Y+ +I G CK G L A L NEM K ++ Y TLI G+ A
Sbjct: 241 ---RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ +L +M+K+ + + V ++ +I EG + L M+ I PD TY+
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C+ +++A ++ + + NILIN C++N + +L M +RG
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK--EEXXXX 298
+V D VT+ +LI G C+ G +E A +++++M+ +P++V Y +++GLC E
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 299 XXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
M L D+ YN +I+G CN+ K+D+A+ ++ G+ + TYN +I
Sbjct: 478 EIFEKIEKSKMEL-DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
LCK G + +A L + M G P+ TY ILI + + + KL + + G
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Query: 419 KQTYKAVVSPLLQEG 433
T K VV +L +G
Sbjct: 597 ASTVKMVVD-MLSDG 610
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 191/383 (49%), Gaps = 4/383 (1%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
GI N+ T +++I+ C+ + LA + K+ + PD++T++ LI G C G++
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGY---EPDTVTFSTLINGLCLEGRV 158
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
+ A +L + M+E P + T L++G + +A L D M++ G N V Y V
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPV 218
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
+ + G L+ M + +I D YSI+ GLC++G+++ AF +++
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
D + LI C + +LL M R + PD+V F +LID KEG + A +
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYC 325
++++M++ G P+ V Y S+I+G CKE ++ T+N LINGYC
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
+ ID+ M G+ A+ TYNTLI C+LG ++ AKEL + M+ + PD +
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 386 TYTILITSFSKKCSPEEVIKLHD 408
+Y IL+ PE+ +++ +
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFE 481
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 216/437 (49%), Gaps = 4/437 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ +I LC E ++ EA+ + R ++ G P ++T N +++ C G + A+ ++ +M
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM-- 203
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+P+ +TY ++ CK G+ +A +L +M E+ I + Y+ +IDG + S
Sbjct: 204 -VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L+ AF L +EM KG + +IY T+I G + + L+ M+ +I PD +S
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + G + EA + H ++++ + D ++ LI+ C+ N L A +L M +G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
P+I TF LI+G+CK +++ ++++ KM G + V YN++I G C+
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ D+++Y L++G C++G+ ++A ++ + + + YN +I+ +
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
C + A +L + L+G PD TY I+I KK S E L M G P+
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 420 QTYKAVVSPLLQEGVET 436
TY ++ L EG T
Sbjct: 563 CTYNILIRAHLGEGDAT 579
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 184/381 (48%), Gaps = 1/381 (0%)
Query: 54 VVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLID 113
V + M+ RP I ++ L + + + L +M K I N+ T + +I+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 114 GYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPP 173
R R L AF +++K G ++V ++T+I+ L +EG + L+ MV+ P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
T + L GLC NG V++A +++E + ++ ++ +C+S + A +LL
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 234 ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
M R + D V + +IDG CK+G+++NA ++ +M G K ++++Y ++I G C
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 294 EXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
+ DV+ ++ LI+ + GK+ EA M GI+ + TY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVL 412
+LI+ CK + +A ++ +M+ +G P+ T+ ILI + K ++ ++L M L
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 413 KGVIPHKQTYKAVVSPLLQEG 433
+GV+ TY ++ + G
Sbjct: 416 RGVVADTVTYNTLIQGFCELG 436
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 170/365 (46%), Gaps = 30/365 (8%)
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A L EM P + ++ L +R + + LC +M KG+ N + +I+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 149 WLYVEGDMEGVSLLISSM---VDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
+SL S+M + PD T+S L GLC G V+EA + +++E
Sbjct: 116 CCC---RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
+ N L+N LC + +S A L+ M G P+ VT+G ++ CK G A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF----------DVI 315
++ KM + K + V Y+ +I+GLCK+ NLF D+I
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKD---------GSLDNAFNLFNEMEIKGFKADII 283
Query: 316 TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM 375
Y TLI G+C +G+ D+ M I + ++ LI+ K G +++A+EL K M
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 376 ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV-----SPLL 430
I +G PD +TYT LI F K+ ++ + D MV KG P+ +T+ ++ + L+
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 431 QEGVE 435
+G+E
Sbjct: 404 DDGLE 408
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 207/408 (50%), Gaps = 7/408 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+I+ L K EA+++ R ++ G PN+VT+ ++++ CK G +DLA +++KME
Sbjct: 119 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 178
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
I D + +N +I CK + A L EM K I PNV TY++LI
Sbjct: 179 ---KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 235
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+A +L +M++K + N V +N +I EG L M+ I PD FTY+ L
Sbjct: 236 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 295
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
G C + +++A + ++ + D ++N LI C+S + +L M RGL
Sbjct: 296 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 355
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
V D VT+ +LI G +G+ +NA +V+++M+ G P+++ Y+ +++GLC
Sbjct: 356 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 415
Query: 302 XXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
+ D+ Y T+I G C +GK+D+ + ++ G+ N TYNT+I+ LC
Sbjct: 416 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 475
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK---KCSPEEVIK 405
+Q+A L+K M G +PD TY LI + + K + E+I+
Sbjct: 476 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 523
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 212/427 (49%), Gaps = 4/427 (0%)
Query: 8 CKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIR 67
C ++ +A+++ + ++ G P+ +TF +I + + A + V+ ++ M +
Sbjct: 90 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIH---GLFLHNKASEAVALVDRMVQRGCQ 146
Query: 68 PDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRL 127
P+ +TY ++ G CK G + +A L N+M I +V + T+ID + R +++A L
Sbjct: 147 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 206
Query: 128 CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR 187
EM KG+ N V Y+++I L G S L+S M++ +I P+ T++ L +
Sbjct: 207 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 266
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
G EA K H +++ ++ D F++N LIN C + L AKQ+ M + PD+ T
Sbjct: 267 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 326
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXX 307
+ +LI G CK VE+ +++ +M G + V Y ++I GL +
Sbjct: 327 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 386
Query: 308 XMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
+ D++TY+ L++G CN+GK+++A M+ + I + Y T+I +CK G +
Sbjct: 387 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 446
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
+L + L+G P+ +TY +I+ K +E L M G +P TY ++
Sbjct: 447 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 506
Query: 427 SPLLQEG 433
L++G
Sbjct: 507 RAHLRDG 513
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 196/386 (50%), Gaps = 4/386 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
VV+ LCK + A ++ + I +VV FN IID CK +D AL + +ME
Sbjct: 154 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 213
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
IRP+ +TY+ LI C G+ + A +L ++M+EK I PN+ T+ LID + +
Sbjct: 214 G---IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 270
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
EA +L D+M+K+ + + YN++I+ + ++ + MV PD TY+ L
Sbjct: 271 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 330
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
KG C++ V + + ++ L+ D ++ LI L + A+++ M G+
Sbjct: 331 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 390
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
PDI+T+ L+DG C G +E A++V++ M KS K ++ +Y ++I G+CK
Sbjct: 391 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 450
Query: 302 XXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
+ +V+TYNT+I+G C+ + EA+A MK G + TYNTLI
Sbjct: 451 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 510
Query: 361 KLGHIQQAKELMKVMILQGFVPDYIT 386
+ G + EL++ M FV D T
Sbjct: 511 RDGDKAASAELIREMRSCRFVGDAST 536
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 202/403 (50%), Gaps = 2/403 (0%)
Query: 9 KECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRP 68
K+ KL +A+ +F +K P++ FN ++ KM DL + + ++M + P
Sbjct: 19 KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKL-GYEP 77
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
+T + L+ G+C +++ A L ++M+E P+ T+ TLI G EA L
Sbjct: 78 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 137
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
D M+++G N V Y V++ L GD++ L++ M +I D ++ + LC+
Sbjct: 138 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 197
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
+V++A ++ + + +++ LI+ LC S A QLL+ M + + P++VTF
Sbjct: 198 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 257
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
+LID KEG A ++++ M+K P++ YNS+ING C +
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 317
Query: 309 MNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQ 367
+ F D+ TYNTLI G+C S ++++ M + G+ + TY TLI L G
Sbjct: 318 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 377
Query: 368 AKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYM 410
A+++ K M+ G PD +TY+IL+ E+ +++ DYM
Sbjct: 378 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 173/339 (51%), Gaps = 8/339 (2%)
Query: 1 NVVIYA-----LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
NVV Y+ LC + +A + ++ I PN+VTFN +ID K G A K+
Sbjct: 218 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL- 276
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
+ M SI PD TYN LI GFC +L A+++ M+ KD P++ TY TLI G+
Sbjct: 277 --HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 334
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
+++ +E+ L EM +GLV ++V Y T+I L+ +GD + + MV + +PPD
Sbjct: 335 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 394
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
TYSIL GLC NG + +A + + ++ + D + + +I +C++ + L S
Sbjct: 395 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 454
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
+ ++G+ P++VT+ ++I G C + ++ A + +KM + G P+ YN++I ++
Sbjct: 455 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 514
Query: 296 XXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAF 334
+ L+ + G++D++F
Sbjct: 515 KAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSF 553
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 32/177 (18%)
Query: 257 KEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVIT 316
K+ +++A+ ++ M+KS P++ +N +++ + K M FD++
Sbjct: 19 KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAK----------------MKKFDLVI 62
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
+ A M G + T ++L+N C I A L+ M+
Sbjct: 63 ----------------SLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 106
Query: 377 LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
G+ PD IT+T LI E + L D MV +G P+ TY VV+ L + G
Sbjct: 107 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 163
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 206/394 (52%), Gaps = 4/394 (1%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
GI N+ T N++++ C+ + LAL + KM + P +T+ L+ GFC+ ++
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH---EPSIVTFGSLLNGFCRGDRV 167
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
A + ++M+ PNV Y T+IDG +++ ++ A L + M K G+ + V YN++
Sbjct: 168 YDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
I L G + ++S M I PD FT++ L + G V+EA +F+ +++ +L
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
D ++++LI LC + L A+++ M +G PD+VT+ LI+G+CK VE+ ++
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYC 325
++ +M + G N V Y +I G C+ + ++ITYN L++G C
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
++GKI++A M+ G+ A+ TYN +I +CK G + A ++ + QG +PD
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW 467
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
TYT ++ KK E L M G++P++
Sbjct: 468 TYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 216/426 (50%), Gaps = 6/426 (1%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
KL +++ +F+ ++ P++ F+ ++ KM D+ + + +M+++ + P ++
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGI----PHNL 116
Query: 72 -TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDE 130
T N L+ FC+ +L++A +M++ P++ T+ +L++G+ R + +A + D+
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGN 190
M+ G N VIYNT+I L ++ L++ M + I PD TY+ L GLC +G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 191 VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGS 250
++A + S + + + D F+ N LI+ + +S A++ M R L PDIVT+
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 251 LIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN 310
LI G C ++ A +++ M+ G P++V Y+ +ING CK +
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 311 LF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
+ + +TY LI GYC +GK++ A M G+ N TYN L++ LC G I++A
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
++ M G D +TY I+I K + ++ + +G++P TY ++ L
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Query: 430 LQEGVE 435
++G+
Sbjct: 477 YKKGLR 482
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 174/346 (50%), Gaps = 4/346 (1%)
Query: 6 ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYS 65
C+ ++ +A+ +F + + G PNVV +N IID CK +D AL ++++ME
Sbjct: 160 GFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEK---DG 216
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
I PD +TYN LI G C G+ + A ++ + M +++I P+V T+ LID + + EA
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
+EM+++ L + V Y+ +I+ L + ++ + MV PD TYSIL G
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
C++ V K ++ + ++ + ++ ILI CR+ L+ A+++ M G+ P+I
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXX 305
+T+ L+ G C G +E A+ + M K+G ++V YN +I G+CK
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 306 XXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHA 350
L D+ TY T++ G G EA A MK GI N
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 154/311 (49%), Gaps = 32/311 (10%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I LCK ++ A+ + R K GI P+VVT+N +I C G A ++VS M
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 61 MSVY--------------------------------SIRPDSITYNCLIGGFCKMGKLTM 88
+Y S+ PD +TY+ LI G C +L
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
AE++ M+ K P+V TY+ LI+GY +++ +E +L EM ++G+V N+V Y +I
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
G + + MV + P+ TY++L GLC NG + +A + + +N +
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D ++NI+I +C++ ++ A + S+ +GL+PDI T+ +++ G K+G A ++
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 269 EKMMKSGEKPN 279
KM + G PN
Sbjct: 490 RKMKEDGILPN 500
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 224/458 (48%), Gaps = 39/458 (8%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
KL +A+ +F +K P++ FN ++ KM DL + + KM+ + I +
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG---ISHNLY 121
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
TYN LI FC+ ++++A L +MM+ P++ T ++L++GY + + +A L D+M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
++ G +++ + T+IH L++ L+ MV P+ TY ++ GLC+ G++
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 192 NEAFKFHSKI----LENNLI---------------EDAF----------------SHNIL 216
+ AF +K+ +E N++ +DA +++ L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 217 INYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE 276
I+ LC S A +LL+ M R + P++VTF +LID KEG + A ++Y++M+K
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 277 KPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFA 335
P++ Y+S+ING C + + F +V+TYNTLING+C + +IDE
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 336 FSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFS 395
M G+ N TY TLI+ + A+ + K M+ G P+ +TY L+
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 396 KKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
K E+ + + +Y+ + P TY ++ + + G
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 217/457 (47%), Gaps = 39/457 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I C+ ++ A+++ + +K G P++VT + +++ C + A+ +V +M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 61 MSVYSIRPDSITYNCLI-----------------------------------GGFCKMGK 85
M RPD+IT+ LI G CK G
Sbjct: 184 MGY---RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 86 LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNT 145
+ +A L N+M I NV Y+T+ID + R ++A L EM KG+ N + Y++
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
+I L S L+S M++ +I P+ T++ L + G + EA K + ++++ +
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
+ D F+++ LIN C + L AK + M + P++VT+ +LI+G CK ++ V
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGY 324
+++ +M + G N V Y ++I+G + + +++TYNTL++G
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
C +GK+++A ++ + + TYN +I +CK G ++ +L + L+G PD
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540
Query: 385 ITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQT 421
I Y +I+ F +K EE L M G +P T
Sbjct: 541 IIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 1/208 (0%)
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVL 282
S L A L M +P I F L+ K + + + EKM + G NL
Sbjct: 63 SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 283 YNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMK 341
YN +IN C+ + ++T ++L+NGYC+ +I +A A M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 342 NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
G + T+ TLI+ L +A L+ M+ +G P+ +TY +++ K+ +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 402 EVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
L + M + + Y V+ L
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSL 270
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 211/422 (50%), Gaps = 7/422 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYR-SLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
NV+++ CKE ++ +A++ S + G +P+ TFN +++ CK G + A+++ M+
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI---MD 319
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
VM PD TYN +I G CK+G++ A ++ ++M+ +D PN TY TLI +
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+EEA L + KG++ + +N++I L + + L M PD+FTY+
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+L LC G ++EA ++ + ++N LI+ C++N A+++ M V
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+ + VT+ +LIDG CK VE+A Q+ ++M+ G+KP+ YNS++ C+
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 300 XXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
D++TY TLI+G C +G+++ A +++ GI YN +I
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Query: 359 LCKLGHIQQAKELMKVMILQGFV-PDYITYTILITSFSKKCSP-EEVIKLHDYMVLKGVI 416
L + +A L + M+ Q PD ++Y I+ P E + ++ KG +
Sbjct: 620 LFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFV 679
Query: 417 PH 418
P
Sbjct: 680 PE 681
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 210/418 (50%), Gaps = 23/418 (5%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
G+ P+ +N ++++ ++ L +KM SV+ I+PD T+N LI C+ +L
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKM---SVWGIKPDVSTFNVLIKALCRAHQL 205
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
A + +M +VP+ +T+ T++ GY L+ A R+ ++M++ G ++V N +
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 147 IHWLYVEGDMEGVSLLISSMVD-NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
+H EG +E I M + + PD++T++ L GLC+ G+V A + +L+
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
D +++N +I+ LC+ + A ++L M R P+ VT+ +LI CKE VE A
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF----------DVI 315
++ + G P++ +NS+I GLC M LF D
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLC---------LTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 316 TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM 375
TYN LI+ C+ GK+DEA M+ +G A + TYNTLI+ CK ++A+E+ M
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 376 ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ G + +TY LI K E+ +L D M+++G P K TY ++++ + G
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 213/434 (49%), Gaps = 5/434 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+I ALC+ +L A+ + +G+ P+ TF ++ + G +D AL++ E
Sbjct: 193 NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI---REQ 249
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKD-IVPNVRTYATLIDGYSRAR 119
M + +++ N ++ GFCK G++ A EM +D P+ T+ TL++G +A
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
++ A + D M+++G + YN+VI L G+++ ++ M+ P+ TY+
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L LC+ V EA + + ++ D + N LI LC + N A +L M +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G PD T+ LID C +G ++ A+ + ++M SG +++ YN++I+G CK
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 300 XXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
+ + +TYNTLI+G C S ++++A M G + TYN+L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
C+ G I++A ++++ M G PD +TY LI+ K E KL + +KG+
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 419 KQTYKAVVSPLLQE 432
Y V+ L ++
Sbjct: 610 PHAYNPVIQGLFRK 623
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 166/331 (50%), Gaps = 5/331 (1%)
Query: 103 PNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSL- 161
P Y ++ R+ S ++ ++ ++M M + + +I Y + +++ L
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIES-YAQFELQDEILS 139
Query: 162 LISSMVDN-RIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYL 220
++ M+D + PD Y+ + L ++ H+K+ + D + N+LI L
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 221 CRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNL 280
CR++ L A +L M GLVPD TF +++ G+ +EG+++ A+++ E+M++ G +
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 281 VLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF--DVITYNTLINGYCNSGKIDEAFAFSF 338
V N +++G CKE + F D T+NTL+NG C +G + A
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 339 AMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKC 398
M G + TYN++I+ LCKLG +++A E++ MI + P+ +TY LI++ K+
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 399 SPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
EE +L + KG++P T+ +++ L
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGL 410
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 227/466 (48%), Gaps = 33/466 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
N++I LC+ +L A+++ + +K G P++VT N +++ C + A+ +V +M
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 59 ------------------------------EVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
E M V +PD +TY +I G CK G+ +
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A L N+M + I +V Y+T+ID + R +++A L EM KG+ + Y+++I
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
L G S L+S M++ +I P+ T++ L + G + EA K ++++ ++
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
+ ++N LIN C + L A+Q+ M + +PD+VT+ +LI+G CK V + ++++
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNS 327
M + G N V Y ++I+G + + +++TYNTL++G C +
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
GK+++A ++ + + + TYN + +CK G ++ +L + L+G PD I Y
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 388 TILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+I+ F KK EE L M G +P TY ++ L++G
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 204/408 (50%), Gaps = 4/408 (0%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
G+ N+ T+N++I+ C+ + AL ++ KM + P +T N L+ GFC ++
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGY---GPSIVTLNSLLNGFCHGNRI 151
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
+ A L ++M+E P+ T+ TL+ G + EA L + M+ KG + V Y V
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 211
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
I+ L G+ + L++ M +I D YS + LC+ +V++A +++ +
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
D F+++ LI+ LC S A +LL+ M R + P++VTF SLID KEG + A +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN-LFDVITYNTLINGYC 325
++++M++ PN+V YNS+ING C + + L DV+TYNTLING+C
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
+ K+ + M G+ N TY TLI+ + A+ + K M+ G P+ +
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
TY L+ K E+ + + +Y+ + P TY + + + G
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 210/422 (49%), Gaps = 33/422 (7%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV- 60
+++ L + K EA+++ R + G P++VT+ +I+ CK G DLAL +++KME
Sbjct: 175 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 234
Query: 61 -----MSVYS--------------------------IRPDSITYNCLIGGFCKMGKLTMA 89
+ +YS IRPD TY+ LI C G+ + A
Sbjct: 235 KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 294
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
+L ++M+E+ I PNV T+ +LID +++ L EA +L DEM+++ + N V YN++I+
Sbjct: 295 SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING 354
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
+ ++ + + MV PD TY+ L G C+ V + + + L+ +
Sbjct: 355 FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
++ LI+ ++++ A+ + M G+ P+I+T+ +L+DG CK G +E A+ V+E
Sbjct: 415 TVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Query: 270 KMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSG 328
+ KS +P++ YN + G+CK + DVI YNT+I+G+C G
Sbjct: 475 YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKG 534
Query: 329 KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYT 388
+EA+ MK G + TYNTLI + G + EL+K M F D TY
Sbjct: 535 LKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 594
Query: 389 IL 390
++
Sbjct: 595 LV 596
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 207/423 (48%), Gaps = 4/423 (0%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
KL EA+ +F +K +P++V F+ ++ KM DL + KME++ V +
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGV---SHNLY 101
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
TYN +I C+ +L+ A + +MM+ P++ T +L++G+ + EA L D+M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
++ G ++V + T++H L+ L+ MV PD TY + GLC+ G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
+ A +K+ + + D ++ +I+ LC+ ++ A L M +G+ PD+ T+ SL
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
I C G +A ++ M++ PN+V +NS+I+ KE ++
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 312 F-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
+++TYN+LING+C ++DEA M + + TYNTLIN CK + E
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLL 430
L + M +G V + +TYT LI F + + + MV GV P+ TY ++ L
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 431 QEG 433
+ G
Sbjct: 462 KNG 464
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 174/333 (52%), Gaps = 5/333 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I LC + +A + L+ I PNVVTFN +ID K G + A K+ +M
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM---I 337
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
SI P+ +TYN LI GFC +L A+++ M+ KD +P+V TY TLI+G+ +A+ +
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+ L +M ++GLV N+V Y T+IH + D + ++ MV + + P+ TY+ L
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
GLC+NG + +A + ++ + D +++NI+ +C++ + L S+ ++G+
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
PD++ + ++I G CK+G E A ++ KM + G P+ YN++I ++
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 303 XXXXXXMNLF-DVITYNTLINGYCNSGKIDEAF 334
D TY L+ + G++D+ F
Sbjct: 578 IKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGF 609
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 202/393 (51%), Gaps = 9/393 (2%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
++ AL KE + + V+ ++ I PNV TFN++I+ CK G M+ A V ME M
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV---MEDMK 250
Query: 63 VYSIRPDSITYNCLIGGFCKMG---KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
VY P+ ++YN LI G+CK+G K+ A+ + EM+E D+ PN+ T+ LIDG+ +
Sbjct: 251 VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDD 310
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+L + ++ EM+ + + N + YN++I+ L G + + MV + P+ TY+
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYN 370
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L G C+N + EA + + +N+LI+ C+ + L M
Sbjct: 371 ALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+VPD+ T+ LI G C+ GN+E A ++++++ G P+LV ++ ++ G C++
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKA 489
Query: 300 XXXXXXXXXMNLFDV-ITYNTLINGYCNSGKIDEAFAFSFAM-KNAGIAANHATYNTLIN 357
M L +TYN ++ GYC G + A M K + N A+YN L+
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
+ G ++ A L+ M+ +G VP+ ITY I+
Sbjct: 550 GYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 195/388 (50%), Gaps = 25/388 (6%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NVVI ALCK K+ +A V +G PNVV++N +ID CK+G K + ++
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M + P+ T+N LI GF K L + K+ EM+++D+ PNV +Y +LI+G
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM--EGVSLLISSMVDNRIPPDKFTY 178
+ EA + D+M+ G+ N + YN +I+ + + DM E + + S +P + Y
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALING-FCKNDMLKEALDMFGSVKGQGAVPTTRM-Y 404
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
++L C+ G +++ F ++ ++ D ++N LI LCR+ N+ AK+L +
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXX 298
+GL PD+VTF L++G+C++G A + ++M K G KP + YN V+ G CKE
Sbjct: 465 KGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKA 523
Query: 299 XXXXXXXXXXMNLF--DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
+V +YN L+ GY GK+++A M G+ N TY
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY---- 579
Query: 357 NFLCKLGHIQQAKELMK-VMILQGFVPD 383
E++K M+ QGFVPD
Sbjct: 580 -------------EIVKEEMVDQGFVPD 594
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 187/372 (50%), Gaps = 4/372 (1%)
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS---LE 122
I+P+ T+N +I CK GK+ A + +M PNV +Y TLIDGY + +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+A + EM++ + N +N +I + + ++ G + M+D + P+ +Y+ L
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
GLC G ++EA K++ + + ++N LIN C+++ L A + S+ +G V
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
P + LID +CK G +++ + E+M + G P++ YN +I GLC+
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 303 XXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKL 362
L D++T++ L+ GYC G+ +A M G+ H TYN ++ CK
Sbjct: 459 FDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518
Query: 363 GHIQQAKELMKVMILQGFVP-DYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQT 421
G+++ A + M + + + +Y +L+ +S+K E+ L + M+ KG++P++ T
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Query: 422 YKAVVSPLLQEG 433
Y+ V ++ +G
Sbjct: 579 YEIVKEEMVDQG 590
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 138/251 (54%), Gaps = 7/251 (2%)
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
R+ +V +K +++ + + F+ N++IN LC++ ++ A+ ++ M V G P++V
Sbjct: 203 RSADVEYVYK---EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVV 259
Query: 247 TFGSLIDGHCK---EGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
++ +LIDG+CK G + A V ++M+++ PNL +N +I+G K++
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF 319
Query: 304 XXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKL 362
++ +VI+YN+LING CN GKI EA + M +AG+ N TYN LIN CK
Sbjct: 320 KEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN 379
Query: 363 GHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
+++A ++ + QG VP Y +LI ++ K ++ L + M +G++P TY
Sbjct: 380 DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439
Query: 423 KAVVSPLLQEG 433
+++ L + G
Sbjct: 440 NCLIAGLCRNG 450
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 144/317 (45%), Gaps = 46/317 (14%)
Query: 159 VSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILIN 218
V + M+ +I P+ FT++++ LC+ G +N+A + + S+N LI+
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 219 YLCR---SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
C+ + + A +L M + P++ TF LIDG K+ N+ +++V+++M+
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 276 EKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVITYNTLING-------- 323
KPN++ YNS+INGLC E NL ITYN LING
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL---ITYNALINGFCKNDMLK 383
Query: 324 ---------------------------YCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
YC GKID+ FA M+ GI + TYN LI
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
LC+ G+I+ AK+L + +G +PD +T+ IL+ + +K + L M G+
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 417 PHKQTYKAVVSPLLQEG 433
P TY V+ +EG
Sbjct: 503 PRHLTYNIVMKGYCKEG 519
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 225/466 (48%), Gaps = 33/466 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
++ I C+ +L A++V + +K G P++VT + +++ C + A+ +V +M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 59 ------------------------------EVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
+ M +PD +TY ++ G CK G + +
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A L +M + I +V Y T+IDG + + +++A L EM KG+ + Y+++I
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
L G S L+S M++ +I P+ T+S L + G + EA K + ++++ ++
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D F+++ LIN C + L AK + M + P++VT+ +LI G CK VE ++++
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNS 327
+M + G N V Y ++I+G + + + +++TYN L++G C +
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
GK+ +A ++ + + + TYN +I +CK G ++ EL + L+G P+ I Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 388 TILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+I+ F +K S EE L M G +P+ TY ++ L++G
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 209/408 (51%), Gaps = 4/408 (0%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
GI ++ T+++ I+ C+ + LAL V++KM + PD +T + L+ G+C ++
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY---EPDIVTLSSLLNGYCHSKRI 169
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
+ A L ++M+E P+ T+ TLI G EA L D+M+++G + V Y TV
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
++ L GD++ L+ M +I D Y+ + GLC+ ++++A +++ +
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
D F+++ LI+ LC S A +LL+ M R + P++VTF +LID KEG + A +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYC 325
+Y++M+K P++ Y+S+ING C + + F +V+TY+TLI G+C
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
+ +++E M G+ N TY TLI+ + A+ + K M+ G P+ +
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
TY IL+ K + + + +Y+ + P TY ++ + + G
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 221/460 (48%), Gaps = 39/460 (8%)
Query: 10 ECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPD 69
+ +L +A+ +F + +P+++ F+ ++ KM DL + KME++ I +
Sbjct: 661 DIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILG---ISHN 717
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
TYN LI FC+ +L++A L +MM+ P++ T +L++G+ + +A L D
Sbjct: 718 LYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD 777
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
+M++ G ++V + T+IH L++ LI MV PD TY + GLC+ G
Sbjct: 778 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 837
Query: 190 NVNEAFKFHSKI----LENNLI---------------EDAF----------------SHN 214
+ + A +K+ +E N++ +DA +++
Sbjct: 838 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 897
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
LI+ LC S A +LL+ M R + P++VTF +LID K+G + A ++YE+M+K
Sbjct: 898 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 957
Query: 275 GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN-LFDVITYNTLINGYCNSGKIDEA 333
PN+ Y+S+ING C + + L +V+TYNTLING+C + ++D+
Sbjct: 958 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 1017
Query: 334 FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
M G+ N TY TLI+ + A+ + K M+ G P+ +TY IL+
Sbjct: 1018 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 1077
Query: 394 FSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
K + + + +Y+ + P TY ++ + + G
Sbjct: 1078 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 1117
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 190/364 (52%), Gaps = 4/364 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ C ++ +A+++ + ++ G P+ VTF +I + + A + V+ ++
Sbjct: 757 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH---GLFLHNKASEAVALIDR 813
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M +PD +TY ++ G CK G +A L N+M I NV Y+T+ID + R
Sbjct: 814 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 873
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++A L EM KG+ N + Y+++I L G S L+S M++ +I P+ T+S
Sbjct: 874 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 933
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + G + +A K + ++++ ++ + F+++ LIN C + L AKQ+L M +
Sbjct: 934 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 993
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+P++VT+ +LI+G CK V+ ++++ +M + G N V Y ++I+G +
Sbjct: 994 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 1053
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ + +++TYN L++G C +GK+ +A ++ + + + TYN +I +
Sbjct: 1054 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 1113
Query: 360 CKLG 363
CK G
Sbjct: 1114 CKAG 1117
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 199/421 (47%), Gaps = 39/421 (9%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
K+ +A+ +F +K +P++V FN ++ KM +L V+S E M I D
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL---VISLGEQMQTLGISHDLY 119
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
TY+ I FC+ +L++A + +MM+ P++ T ++L++GY ++ + +A L D+M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
++ G PD FT++ L GL +
Sbjct: 180 VEMGY-----------------------------------KPDTFTFTTLIHGLFLHNKA 204
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
+EA ++++ D ++ ++N LC+ ++ A LL M + D+V + ++
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
IDG CK ++++A+ ++ +M G +P++ Y+S+I+ LC +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 312 -FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
+V+T++ LI+ + GK+ EA M I + TY++LIN C + +AK
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLL 430
+ ++MI + P+ +TY+ LI F K EE ++L M +G++ + TY ++
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 431 Q 431
Q
Sbjct: 445 Q 445
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 217/509 (42%), Gaps = 79/509 (15%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ +I A KE KL+EA ++ +K I P++ T++ +I+ C +D A + E+
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM---FEL 388
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M P+ +TY+ LI GFCK ++ +L EM ++ +V N TY TLI G+ +AR
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ A + +M+ G+ N + YN ++ L G + ++ + + + PD +TY+I
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ +G+C+ G V + ++ + + + ++N +I+ CR + A LL M G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG------------------EKPNL-- 280
+P+ T+ +LI ++G+ E + ++ ++M G EKPN
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLSSKFKREIEKPNREN 628
Query: 281 ----VLYNSVI-----------------NGLCKEEXXXXXXXXXXXXXXMNLFDVITYNT 319
++++ I GL E +I ++
Sbjct: 629 ACKNIIFSEEICSSESCGESYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSK 688
Query: 320 LINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC----------------KLG 363
L++ K D +F M+ GI+ N TYN LIN C KLG
Sbjct: 689 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 748
Query: 364 H-------------------IQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVI 404
+ I A L+ M+ G+ PD +T+T LI E +
Sbjct: 749 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 808
Query: 405 KLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
L D MV +G P TY AVV+ L + G
Sbjct: 809 ALIDRMVQRGCQPDLVTYGAVVNGLCKRG 837
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 164/329 (49%), Gaps = 4/329 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+I+ L K EA+++ R ++ G P++VT+ +++ CK G DLAL +++KME
Sbjct: 793 TLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA 852
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
I + + Y+ +I CK A L EM K + PNV TY++LI
Sbjct: 853 K---IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 909
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+A RL +M+++ + N V ++ +I +G + L M+ I P+ FTYS L
Sbjct: 910 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 969
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
G C + EA + ++ + + + ++N LIN C++ + +L M RGL
Sbjct: 970 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 1029
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
V + VT+ +LI G + + +NA V+++M+ G PN++ YN +++GLCK
Sbjct: 1030 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 1089
Query: 302 XXXXXXXMNLF-DVITYNTLINGYCNSGK 329
+ D+ TYN +I G C +GK
Sbjct: 1090 VFEYLQRSTMEPDIYTYNIMIEGMCKAGK 1118
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 170/383 (44%), Gaps = 59/383 (15%)
Query: 68 PDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRL 127
P + +N L+ KM K + L +M I ++ TY+ I+ + R L A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 128 CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR 187
+MMK G PD T S L G C
Sbjct: 141 LAKMMKLGY-----------------------------------EPDIVTLSSLLNGYCH 165
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
+ +++A +++E D F+ LI+ L N S A L+ M RG PD+VT
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXX 307
+G++++G CK G+++ A+ + +KM K + ++V+YN++I+GLCK +
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK---------HMDD 276
Query: 308 XMNLF----------DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
+NLF DV TY++LI+ CN G+ +A M I N T++ LI+
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
K G + +A++L MI + PD TY+ LI F +E + + M+ K P
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 418 HKQTYKAVV-----SPLLQEGVE 435
+ TY ++ + ++EG+E
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGME 419
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 105/292 (35%), Gaps = 71/292 (24%)
Query: 213 HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL--------------------- 251
IL N L + A L M P IV F L
Sbjct: 51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 252 --------------IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
I+ C+ + A+ V KMMK G +P++V +S++NG C +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 298 XXXXXXXXXXXM--------------NLF----------------------DVITYNTLI 321
M LF D++TY T++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 322 NGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFV 381
NG C G ID A + M+ I A+ YNT+I+ LCK H+ A L M +G
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 382 PDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
PD TY+ LI+ + +L M+ + + P+ T+ A++ ++EG
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 342
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
A VF + + G+ PN++T+N+++D CK G + A+ V E + ++ PD TYN
Sbjct: 1052 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV---FEYLQRSTMEPDIYTYNI 1108
Query: 76 LIGGFCKMGKLTMA 89
+I G CK GK M
Sbjct: 1109 MIEGMCKAGKWKMG 1122
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 218/436 (50%), Gaps = 48/436 (11%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I CK+ +A V L GI+P T+N+ I C G +D A +++S M
Sbjct: 312 NPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA 371
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
PD ++YN L+ G+ KMGK A L +++ DI P++ TY TLIDG + +
Sbjct: 372 -------PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
LE A RL +EM + + + + Y T++ G++ + + M+ I PD + Y+
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 181 LTKGLCRNGNVNEAFKFHSKILE-NNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
G R G+ ++AF+ H +++ ++ D +N+ I+ LC+ NL A + ++
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
GLVPD VT+ ++I G+ + G + A +Y++M++ P+
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS-------------------- 584
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
VITY LI G+ +G++++AF +S MK G+ N T+N L+ +
Sbjct: 585 --------------VITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 630
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCS---PEEVIKLHDYMVLKGVI 416
CK G+I +A + M +G P+ +YT+LI SK C EEV+KL+ M+ K +
Sbjct: 631 CKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI---SKNCDFEKWEEVVKLYKEMLDKEIE 687
Query: 417 PHKQTYKAVVSPLLQE 432
P T++A+ L ++
Sbjct: 688 PDGYTHRALFKHLEKD 703
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 182/413 (44%), Gaps = 79/413 (19%)
Query: 85 KLTMAEKLK---NEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSV 141
K +MAEK +M+ K +P+VR ++ +R + +A + + M++ G++ +
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239
Query: 142 IYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
+NT++ + GD+E V + M I + TY+IL G +NG + EA +FH +
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 202 L-------------------ENNLIEDAF----------------SHNILINYLCRSNNL 226
+ L +DA+ ++NI I LC +
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359
Query: 227 SGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSV 286
A++LL+SM PD+V++ +L+ G+ K G A +++ + P++V YN++
Sbjct: 360 DDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 287 INGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKID-------------- 331
I+GLC+ +F DVITY TL+ G+ +G +
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Query: 332 --EAFAFS---------------FAMKNAGIAANH-----ATYNTLINFLCKLGHIQQAK 369
+ +A++ F + +A +H YN I+ LCK+G++ +A
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
E + + G VPD++TYT +I + + + L+D M+ K + P TY
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY 588
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 127/273 (46%), Gaps = 3/273 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
++ K L A V+ L+ GI P+ + ++G D A ++ +M
Sbjct: 449 TLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVAT 508
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
++ PD YN I G CK+G L A + + ++ +VP+ TY T+I GY
Sbjct: 509 DHHA--PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+ A L DEM++K L + + Y +I+ G +E + M + P+ T++ L
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
G+C+ GN++EA+++ K+ E + + +S+ +LI+ C +L M + +
Sbjct: 627 LYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEI 686
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
PD T +L H ++ + V+ E+++ S
Sbjct: 687 EPDGYTHRALFK-HLEKDHESREVEFLERLLLS 718
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 224/465 (48%), Gaps = 36/465 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
++ I C+ +L A++V + +K G P++VT + +++ C + A+ +V +M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 59 ------------------------------EVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
+ M +PD +TY ++ G CK G + +
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A L N+M I NV + T+ID + R +E A L EM KG+ N V YN++I+
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
L G S L+S+M++ +I P+ T++ L + G + EA K H ++++ ++
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D ++N+LIN C N L AKQ+ M + +P+I T+ +LI+G CK VE+ V+++
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNS 327
+M + G N V Y ++I G + + D++TY+ L++G C+
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
GK+D A ++ + + N YNT+I +CK G + +A +L + ++ PD +TY
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTY 538
Query: 388 TILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
+I+ K +E L M G +P+ TY ++ L++
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 207/423 (48%), Gaps = 4/423 (0%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
K+ +A+ +F +K +P++V FN ++ KM +L V+S E M I D
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL---VISLGEQMQTLGISHDLY 119
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
TY+ I FC+ +L++A + +MM+ P++ T ++L++GY ++ + +A L D+M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
++ G ++ + T+IH L++ L+ MV PD TY + GLC+ G++
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
+ A +K+ + + N +I+ LC+ ++ A L M +G+ P++VT+ SL
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
I+ C G +A ++ M++ PN+V +N++I+ KE ++
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 312 F-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
D ITYN LING+C ++DEA M + N TYNTLIN CK ++ E
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLL 430
L + M +G V + +TYT +I F + + + MV V TY ++ L
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 431 QEG 433
G
Sbjct: 480 SYG 482
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 220/436 (50%), Gaps = 14/436 (3%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+I+ L K EA+++ + ++ G P++VT+ +++ CK G +DLAL +++KME
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
I+ + + +N +I CK + +A L EM K I PNV TY +LI+
Sbjct: 253 ---RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+A RL M++K + N V +N +I + EG + L M+ I PD TY++L
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
G C + ++EA + ++ + + + ++N LIN C+ + +L M RGL
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK----EEXXX 297
V + VT+ ++I G + G+ ++A V+++M+ + +++ Y+ +++GLC +
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALV 489
Query: 298 XXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
+N+F YNT+I G C +GK+ EA+ ++ I + TYNT+I+
Sbjct: 490 IFKYLQKSEMELNIF---IYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMIS 543
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
LC +Q+A +L + M G +P+ TY LI + + C +L M G +
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVG 603
Query: 418 HKQTYKAVVSPLLQEG 433
T ++V+ +L +G
Sbjct: 604 DASTI-SLVTNMLHDG 618
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 179/366 (48%), Gaps = 35/366 (9%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
N +I +LCK + A+ +F GI PNVVT+N +I+ C G A +++S M
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 59 ------------------------------EVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
E M SI PD+ITYN LI GFC +L
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A+++ M+ KD +PN++TY TLI+G+ + + +E+ L EM ++GLV N+V Y T+I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
+ GD + ++ MV NR+P D TYSIL GLC G ++ A + ++ +
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
+ F +N +I +C++ + A L S+ ++ PD+VT+ ++I G C + ++ A ++
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG 328
KM + G PN YN++I ++ + +L+ + G
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDG 618
Query: 329 KIDEAF 334
++D++F
Sbjct: 619 RLDKSF 624
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 105/292 (35%), Gaps = 71/292 (24%)
Query: 213 HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL--------------------- 251
IL N L + A L M P IV F L
Sbjct: 51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 252 --------------IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
I+ C+ + A+ V KMMK G +P++V +S++NG C +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 298 XXXXXXXXXXXM--------------NLF----------------------DVITYNTLI 321
M LF D++TY T++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 322 NGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFV 381
NG C G ID A M+ A I AN +NT+I+ LCK H++ A +L M +G
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 382 PDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
P+ +TY LI + +L M+ K + P+ T+ A++ +EG
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEG 342
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 214/447 (47%), Gaps = 40/447 (8%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
GI N+ T+++ I+ C+ + LAL ++ KM + P +T N L+ GFC ++
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGY---GPSIVTLNSLLNGFCHGNRI 161
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
+ A L ++M+E P+ T+ TL+ G + EA L + M+ KG + V Y V
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
I+ L G+ + L++ M +I D Y+ + GLC+ ++++AF +K+ +
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
D F++N LI+ LC S A +LL+ M + + PD+V F +LID KEG + A +
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 267 VYEKMMKSGE-KPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF------------- 312
+Y++M+KS P++V YN++I G CK + L
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 313 -----------------------DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
D++TYN L++G CN+G ++ A M+ + +
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 350 ATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDY 409
TY T+I LCK G ++ +L + L+G P+ +TYT +++ F +K EE L
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 410 MVLKGVIPHKQTYKAVVSPLLQEGVET 436
M G +P+ TY ++ L++G E
Sbjct: 522 MKEDGPLPNSGTYNTLIRARLRDGDEA 548
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 194/394 (49%), Gaps = 11/394 (2%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+++ L + K EA+++ R + G P++VT+ +I+ CK G DLAL +++KME
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK- 243
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
I D + YN +I G CK + A L N+M K I P+V TY LI
Sbjct: 244 --GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNR-IPPDKFTYSI 180
+A RL +M++K + + V +N +I EG + L MV ++ PD Y+
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L KG C+ V E + ++ + L+ + ++ LI+ ++ + A+ + M G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK----EEXX 296
+ PDI+T+ L+DG C GNVE A+ V+E M K K ++V Y ++I LCK E+
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481
Query: 297 XXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
N V+TY T+++G+C G +EA A MK G N TYNTLI
Sbjct: 482 DLFCSLSLKGVKPN---VVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
+ G + EL+K M GF D T+ ++
Sbjct: 539 RARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 171/335 (51%), Gaps = 4/335 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I LCK + +A +F + GI P+V T+N +I C G A +++S M
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM-- 311
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMME-KDIVPNVRTYATLIDGYSRAR 119
+I PD + +N LI F K GKL AEKL +EM++ K P+V Y TLI G+ + +
Sbjct: 312 -LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+EE + EM ++GLV N+V Y T+IH + D + ++ MV + + PD TY+
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
IL GLC NGNV A + + ++ D ++ +I LC++ + L S+ ++
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+ P++VT+ +++ G C++G E A ++ +M + G PN YN++I ++
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAF 334
+ L+ + G++D++F
Sbjct: 551 AELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSF 585
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 115/289 (39%), Gaps = 36/289 (12%)
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L++ + ++ +++A ++++ + L++ + + N L M G
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 105
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ ++ T+ I+ C+ + A+ + KMMK G P++V NS++NG C
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 301 XXXXXXXXM--------------NLF----------------------DVITYNTLINGY 324
M LF D++TY +ING
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
C G+ D A M+ I A+ YNT+I+ LCK H+ A +L M +G PD
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 385 ITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
TY LI+ + +L M+ K + P + A++ ++EG
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 211/438 (48%), Gaps = 38/438 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I LC E ++LEA ++ + + G+ +VVT+ I++ CKMG AL ++SKME
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 61 MSV------YS--------------------------IRPDSITYNCLIGGFCKMGKLTM 88
+ YS I P+ TYNC+I GFC G+ +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A++L +M+E++I P+V T+ LI + L EA +LCDEM+ + + ++V YN++I+
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
+ M D PD T++ + CR V+E + +I L+
Sbjct: 410 GFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
+ ++N LI+ C +NL+ A+ L M G+ PD +T L+ G C+ +E A++++
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNS 327
E + S + V YN +I+G+CK + DV TYN +I+G+C
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
I +A MK+ G +++TYNTLI K G I ++ EL+ M GF D T
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Query: 388 TILITSFSKKCSPEEVIK 405
+ + S EE+I+
Sbjct: 646 K-MAEEIICRVSDEEIIE 662
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 215/426 (50%), Gaps = 21/426 (4%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
A+S++ + I N+ +FN++I C + +L K+ + +PD +T+N
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG---FQPDVVTFNT 181
Query: 76 LIGGFCKMGKLTMA---------------EKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
L+ G C +++ A L ++M+E + P V T+ TLI+G
Sbjct: 182 LLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGR 241
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ EA L ++M+ KGL ++ V Y T+++ + GD + L+S M + I PD YS
Sbjct: 242 VLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSA 301
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ LC++G+ ++A S++LE + + F++N +I+ C S A++LL M R
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ PD++TF +LI KEG + A ++ ++M+ P+ V YNS+I G CK
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN---RFD 418
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
M DV+T+NT+I+ YC + ++DE + G+ AN TYNTLI+ C
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
++ ++ A++L + MI G PD IT IL+ F + EE ++L + + + +
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 421 TYKAVV 426
Y ++
Sbjct: 539 AYNIII 544
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 204/425 (48%), Gaps = 8/425 (1%)
Query: 10 ECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPD 69
E LEA+++F + ++ G+ P V+TFN +I+ C G + A +V+KM ++ D
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI---D 260
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
+TY ++ G CKMG A L ++M E I P+V Y+ +ID + +A L
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
EM++KG+ N YN +I G L+ M++ I PD T++ L + G
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
+ EA K ++L + D ++N +I C+ N AK + M PD+VTF
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFN 436
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM 309
++ID +C+ V+ +Q+ ++ + G N YN++I+G C+ +
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 310 NLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
+ D IT N L+ G+C + K++EA ++ + I + YN +I+ +CK + +A
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 369 KELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSP 428
+L + + G PD TY ++I+ F K + + L M G P TY ++
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 429 LLQEG 433
L+ G
Sbjct: 617 CLKAG 621
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 207/440 (47%), Gaps = 17/440 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLA--------- 51
N++I C KL ++S F + K G P+VVTFN ++ C + A
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 52 ---LKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTY 108
L+ V+ + M + P IT+N LI G C G++ A L N+M+ K + +V TY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 109 ATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVD 168
T+++G + + A L +M + + + VIY+ +I L +G L S M++
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 169 NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSG 228
I P+ FTY+ + G C G ++A + ++E + D + N LI+ + L
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 229 AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN 288
A++L M R + PD VT+ S+I G CK ++A +++ M P++V +N++I+
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIID 440
Query: 289 GLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAA 347
C+ + L + TYNTLI+G+C ++ A M + G+
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 348 NHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLH 407
+ T N L+ C+ +++A EL +V+ + D + Y I+I K +E L
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 408 DYMVLKGVIPHKQTYKAVVS 427
+ + GV P QTY ++S
Sbjct: 561 CSLPIHGVEPDVQTYNVMIS 580
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 174/379 (45%), Gaps = 24/379 (6%)
Query: 67 RPDSITYNC--LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEA 124
RP +C +IG F +M + +A L +M + I N+ ++ LI + L +
Sbjct: 101 RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160
Query: 125 FRLCDEMMKKGLVMNSVIYNTVIHWLYVE----------------GDMEGVSLLISSMVD 168
++ K G + V +NT++H L +E G +E V+L MV+
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF-DQMVE 219
Query: 169 NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSG 228
+ P T++ L GLC G V EA +K++ L D ++ ++N +C+ +
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 229 AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN 288
A LL+ M + PD+V + ++ID CK+G+ +A ++ +M++ G PN+ YN +I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 289 GLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAA 347
G C + DV+T+N LI+ GK+ EA M + I
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 348 NHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLH 407
+ TYN++I CK AK + +M PD +T+ +I + + +E ++L
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 408 DYMVLKGVIPHKQTYKAVV 426
+ +G++ + TY ++
Sbjct: 456 REISRRGLVANTTTYNTLI 474
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 16/239 (6%)
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA------ 264
+S NILI C + LS + + G PD+VTF +L+ G C E + A
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 265 ---------VQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDV 314
V ++++M++ G P ++ +N++INGLC E L DV
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
+TY T++NG C G A M+ I + Y+ +I+ LCK GH A+ L
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 375 MILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
M+ +G P+ TY +I F + +L M+ + + P T+ A++S ++EG
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 8/283 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +IY CK + +A +F P+VVTFN IIDV C+ +D ++++ ++
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREI-- 458
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S + ++ TYN LI GFC++ L A+ L EM+ + P+ T L+ G+
Sbjct: 459 -SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
LEEA L + + + +++V YN +IH + ++ L S+ + + PD TY++
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ G C +++A K+ +N D ++N LI ++ + + +L++ M G
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLY 283
D T + C+ + E ++ Y + +GE ++ Y
Sbjct: 638 FSGDAFTIKMAEEIICRVSD-EEIIENYLRPKINGETSSIPRY 679
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 16/260 (6%)
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
++++A F ++ + A N +I R N A L M +R + +I +F
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX------XX 303
LI C + ++ + K+ K G +P++V +N++++GLC E+
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 304 XXXXXMNLFD----------VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYN 353
+ LFD VIT+NTLING C G++ EA A M G+ + TY
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 354 TLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLK 413
T++N +CK+G + A L+ M PD + Y+ +I K + L M+ K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 414 GVIPHKQTYKAVVSPLLQEG 433
G+ P+ TY ++ G
Sbjct: 326 GIAPNVFTYNCMIDGFCSFG 345
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 215/426 (50%), Gaps = 21/426 (4%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
A+S++ + I N+ +FN++I C + +L K+ + +PD +T+N
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG---FQPDVVTFNT 181
Query: 76 LIGGFCKMGKLTMA---------------EKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
L+ G C +++ A L ++M+E + P V T+ TLI+G
Sbjct: 182 LLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGR 241
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ EA L ++M+ KGL ++ V Y T+++ + GD + L+S M + I PD YS
Sbjct: 242 VLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSA 301
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ LC++G+ ++A S++LE + + F++N +I+ C S A++LL M R
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ PD++TF +LI KEG + A ++ ++M+ P+ V YNS+I G CK
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN---RFD 418
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
M DV+T+NT+I+ YC + ++DE + G+ AN TYNTLI+ C
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
++ ++ A++L + MI G PD IT IL+ F + EE ++L + + + +
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 421 TYKAVV 426
Y ++
Sbjct: 539 AYNIII 544
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 211/434 (48%), Gaps = 9/434 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I LC E ++LEA ++ + + G+ +VVT+ I++ CKMG AL ++SKME
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
I+PD + Y+ +I CK G + A+ L +EM+EK I PNV TY +IDG+
Sbjct: 290 TH---IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+A RL +M+++ + + + +N +I EG + L M+ I PD TY+
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ G C++ ++A + + D + N +I+ CR+ + QLL + RG
Sbjct: 407 MIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
LV + T+ +LI G C+ N+ A ++++M+ G P+ + N ++ G C+ E
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 301 XXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ D + YN +I+G C K+DEA+ ++ G+ + TYN +I+
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
C I A L M G PD TY LI K ++ I+L M G
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Query: 420 QTYKAVVSPLLQEG 433
T K +V+ L+ +G
Sbjct: 643 FTIK-MVADLITDG 655
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 204/425 (48%), Gaps = 8/425 (1%)
Query: 10 ECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPD 69
E LEA+++F + ++ G+ P V+TFN +I+ C G + A +V+KM ++ D
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLH---ID 260
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
+TY ++ G CKMG A L ++M E I P+V Y+ +ID + +A L
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
EM++KG+ N YN +I G L+ M++ I PD T++ L + G
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
+ EA K ++L + D ++N +I C+ N AK + M PD+VTF
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFN 436
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM 309
++ID +C+ V+ +Q+ ++ + G N YN++I+G C+ +
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 310 NLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
+ D IT N L+ G+C + K++EA ++ + I + YN +I+ +CK + +A
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 369 KELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSP 428
+L + + G PD TY ++I+ F K + + L M G P TY ++
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 429 LLQEG 433
L+ G
Sbjct: 617 CLKAG 621
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 209/440 (47%), Gaps = 17/440 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
N++I C KL ++S F + K G P+VVTFN ++ C + AL + M
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 59 ----EVMSVYS------IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTY 108
E ++++ + P IT+N LI G C G++ A L N+M+ K + +V TY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 109 ATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVD 168
T+++G + + A L +M + + + VIY+ +I L +G L S M++
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 169 NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSG 228
I P+ FTY+ + G C G ++A + ++E + D + N LI+ + L
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 229 AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN 288
A++L M R + PD VT+ S+I G CK ++A +++ M P++V +N++I+
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIID 440
Query: 289 GLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAA 347
C+ + L + TYNTLI+G+C ++ A M + G+
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 348 NHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLH 407
+ T N L+ C+ +++A EL +V+ + D + Y I+I K +E L
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 408 DYMVLKGVIPHKQTYKAVVS 427
+ + GV P QTY ++S
Sbjct: 561 CSLPIHGVEPDVQTYNVMIS 580
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 174/379 (45%), Gaps = 24/379 (6%)
Query: 67 RPDSITYNC--LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEA 124
RP +C +IG F +M + +A L +M + I N+ ++ LI + L +
Sbjct: 101 RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160
Query: 125 FRLCDEMMKKGLVMNSVIYNTVIHWLYVE----------------GDMEGVSLLISSMVD 168
++ K G + V +NT++H L +E G +E V+L MV+
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF-DQMVE 219
Query: 169 NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSG 228
+ P T++ L GLC G V EA +K++ L D ++ ++N +C+ +
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 229 AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN 288
A LL+ M + PD+V + ++ID CK+G+ +A ++ +M++ G PN+ YN +I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 289 GLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAA 347
G C + DV+T+N LI+ GK+ EA M + I
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 348 NHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLH 407
+ TYN++I CK AK + +M PD +T+ +I + + +E ++L
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 408 DYMVLKGVIPHKQTYKAVV 426
+ +G++ + TY ++
Sbjct: 456 REISRRGLVANTTTYNTLI 474
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 16/239 (6%)
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA------ 264
+S NILI C + LS + + G PD+VTF +L+ G C E + A
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 265 ---------VQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDV 314
V ++++M++ G P ++ +N++INGLC E L DV
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
+TY T++NG C G A M+ I + Y+ +I+ LCK GH A+ L
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 375 MILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
M+ +G P+ TY +I F + +L M+ + + P T+ A++S ++EG
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 16/260 (6%)
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
++++A F ++ + A N +I R N A L M +R + +I +F
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX------XX 303
LI C + ++ + K+ K G +P++V +N++++GLC E+
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 304 XXXXXMNLFD----------VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYN 353
+ LFD VIT+NTLING C G++ EA A M G+ + TY
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 354 TLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLK 413
T++N +CK+G + A L+ M PD + Y+ +I K + L M+ K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 414 GVIPHKQTYKAVVSPLLQEG 433
G+ P+ TY ++ G
Sbjct: 326 GIAPNVFTYNCMIDGFCSFG 345
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 209/401 (52%), Gaps = 5/401 (1%)
Query: 17 MSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCL 76
+S+F+ GI ++ ++N++I+ C+ +AL VV KM + PD +T + L
Sbjct: 89 ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKM---MKFGYEPDVVTVSSL 145
Query: 77 IGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGL 136
I GFC+ ++ A L ++M E P+V Y T+IDG + + +A L D M + G+
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205
Query: 137 VMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFK 196
++V YN+++ L G + L+ MV I P+ T++ + + G +EA K
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 197 FHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHC 256
+ ++ + D F++N LIN LC + AKQ+L M +G +PD+VT+ +LI+G C
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 257 KEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVIT 316
K V+ +++ +M + G + + YN++I G + ++ T
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP--NIRT 383
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
Y+ L+ G C + ++++A M+ + I + TYN +I+ +CK+G+++ A +L + +
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Query: 377 LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
+G PD ++YT +I+ F +K ++ L+ M G++P
Sbjct: 444 CKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 191/383 (49%), Gaps = 7/383 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+VI LC+ + + A+SV + +K G P+VVT + +I+ C+ + A+ +VSKME
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M RPD + YN +I G CK+G + A +L + M + + TY +L+ G +
Sbjct: 168 M---GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+A RL +M+ + +V N + + VI EG L M + PD FTY+
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GLC +G V+EA + ++ + D ++N LIN C+S + +L M RG
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
LV D +T+ ++I G+ + G + A +++ +M +PN+ Y+ ++ GLC
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 301 XXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ D+ TYN +I+G C G +++A+ ++ G+ + +Y T+I+
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 360 CKLGHIQQAKELMKVMILQGFVP 382
C+ ++ L + M G +P
Sbjct: 462 CRKRQWDKSDLLYRKMQEDGLLP 484
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 162/335 (48%), Gaps = 2/335 (0%)
Query: 101 IVPNV-RTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGV 159
IVP + R + + +LEE L +M++ + + V ++ V+ + + + V
Sbjct: 29 IVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLV 88
Query: 160 SLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINY 219
L M I D ++Y+I+ LCR A K+++ D + + LIN
Sbjct: 89 ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148
Query: 220 LCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPN 279
C+ N + A L++ M G PD+V + ++IDG CK G V +AV+++++M + G + +
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
Query: 280 LVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSF 338
V YNS++ GLC ++ +VIT+ +I+ + GK EA
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Query: 339 AMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKC 398
M + + TYN+LIN LC G + +AK+++ +M+ +G +PD +TY LI F K
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 399 SPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+E KL M +G++ TY ++ Q G
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 206/399 (51%), Gaps = 10/399 (2%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
GI ++ TFN++I+ C + LAL ++ KM + PD +T L+ GFC+ ++
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGY---EPDRVTIGSLVNGFCRRNRV 171
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
+ A L ++M+E P++ Y +ID + + + +AF E+ +KG+ N V Y +
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
++ L + L+S M+ +I P+ TYS L +NG V EA + +++ ++
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
D +++ LIN LC + + A Q+ M +G + D+V++ +LI+G CK VE+ ++
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF----DVITYNTLIN 322
++ +M + G N V YN++I G + M+ F D+ TYN L+
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQ---AGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 323 GYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
G C++G++++A M+ + + TY T+I +CK G +++A L + L+G P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 383 DYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQT 421
D +TYT +++ K EV L+ M +G++ + T
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 216/427 (50%), Gaps = 4/427 (0%)
Query: 9 KECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRP 68
++ KL +A+ +F +K +P++V FN ++ K+ D+ + + KMEV+ IR
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG---IRN 118
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
D T+N +I FC ++++A + +M++ P+ T +L++G+ R + +A L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
D+M++ G + V YN +I L + + I P+ TY+ L GLC +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
++A + S +++ + + +++ L++ ++ + AK+L M + PDIVT+
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
SLI+G C ++ A Q+++ M+ G ++V YN++ING CK +
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 309 MNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQ 367
L + +TYNTLI G+ +G +D+A F M GI+ + TYN L+ LC G +++
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 368 AKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
A + + M + D +TYT +I K EE L + LKG+ P TY ++S
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 428 PLLQEGV 434
L +G+
Sbjct: 479 GLCTKGL 485
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 194/390 (49%), Gaps = 6/390 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+VI C ++ A+S+ + LK G P+ VT +++ C+ + A+ +V KM
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ +PD + YN +I CK ++ A E+ K I PNV TY L++G +
Sbjct: 184 IGY---KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+A RL +M+KK + N + Y+ ++ G + L MV I PD TYS
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GLC + ++EA + ++ + D S+N LIN C++ + +L M RG
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK--EEXXXX 298
LV + VT+ +LI G + G+V+ A + + +M G P++ YN ++ GLC E
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 299 XXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
M+L D++TY T+I G C +GK++EA++ ++ G+ + TY T+++
Sbjct: 421 VIFEDMQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYT 388
LC G + + + L M +G + + T +
Sbjct: 480 LCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L+K R+ +N+A S ++++ N L++ + + L M V G
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ D+ TF +I+ C V A+ + KM+K G +P+ V S++NG C+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ D++ YN +I+ C + ++++AF F ++ GI N TY L+N L
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
C A L+ MI + P+ ITY+ L+ +F K E +L + MV + P
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 420 QTYKAVVSPL 429
TY ++++ L
Sbjct: 296 VTYSSLINGL 305
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 217/434 (50%), Gaps = 4/434 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N V++ CK+ + A+ + G+ +V T+NM+I C+ + ++ M
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
++ P+ +TYN LI GF GK+ +A +L NEM+ + PN T+ LIDG+ +
Sbjct: 292 RMIH---PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+EA ++ M KGL + V Y ++ L + + M N + + TY+
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ GLC+NG ++EA +++ ++ + D +++ LIN C+ AK+++ +Y G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L P+ + + +LI C+ G ++ A+++YE M+ G + +N ++ LCK
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ + ++++ LINGY NSG+ +AF+ M G TY +L+ L
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
CK GH+++A++ +K + D + Y L+T+ K + + + L MV + ++P
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Query: 420 QTYKAVVSPLLQEG 433
TY +++S L ++G
Sbjct: 649 YTYTSLISGLCRKG 662
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 195/404 (48%), Gaps = 4/404 (0%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
N ++++I V + G + +L++ +M +Y P T N ++G K G+
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEI---FRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
EM+++ I P+V T+ LI+ S E++ L +M K G V YNTV+HW
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
+G + L+ M + D TY++L LCR+ + + + + + + +
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
++N LIN + A QLL M GL P+ VTF +LIDGH EGN + A++++
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 271 MMKSGEKPNLVLYNSVINGLCKE-EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGK 329
M G P+ V Y +++GLCK E ITY +I+G C +G
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 330 IDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
+DEA M GI + TY+ LIN CK+G + AKE++ + G P+ I Y+
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 390 LITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
LI + + +E I++++ M+L+G T+ +V+ L + G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 202/427 (47%), Gaps = 37/427 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ ++ K + + S LK I P+V TFN++I+V C G+ + + ++ KME
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKME- 220
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S Y+ P +TYN ++ +CK G+ A +L + M K + +V TY LI R+
Sbjct: 221 KSGYA--PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 278
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ + + L +M K+ + N V YNT+I+ EG + S L++ M+ + P+ T++
Sbjct: 279 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 338
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G GN EA K + L S+ +L++ LC++ A+ M G
Sbjct: 339 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ +T+ +IDG CK G ++ AV + +M K G P
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP---------------------- 436
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
D++TY+ LING+C G+ A + G++ N Y+TLI C
Sbjct: 437 ------------DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
++G +++A + + MIL+G D+ T+ +L+TS K E + M G++P+
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544
Query: 421 TYKAVVS 427
++ +++
Sbjct: 545 SFDCLIN 551
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 188/434 (43%), Gaps = 38/434 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I E K+L A + L G+ PN VTFN +ID G ALK+ ME
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ P ++Y L+ G CK + +A M + TY +IDG +
Sbjct: 362 KG---LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L+EA L +EM K G+ + V Y+ +I+ G + ++ + + P+ YS
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L CR G + EA + + ++ D F+ N+L+ LC++ ++ A++ + M G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
++P+ V+F LI+G+ G A V+++M K G P Y S++ GLCK
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK-------- 590
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
G + EA F ++ A + YNTL+ +C
Sbjct: 591 --------------------------GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKG-VIPHK 419
K G++ +A L M+ + +PD TYT LI+ +K I +G V+P+K
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684
Query: 420 QTYKAVVSPLLQEG 433
Y V + + G
Sbjct: 685 VMYTCFVDGMFKAG 698
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 208/469 (44%), Gaps = 40/469 (8%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
V++ LCK + A + R ++G+ +T+ +ID CK G +D A+ ++++M
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM--- 429
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
S I PD +TY+ LI GFCK+G+ A+++ + + PN Y+TLI R L
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK------ 175
+EA R+ + M+ +G + +N ++ L G + + M + I P+
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 176 -----------------------------FTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
FTY L KGLC+ G++ EA KF +
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
D +N L+ +C+S NL+ A L M R ++PD T+ SLI G C++G A+
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669
Query: 267 VYEKMMKSGEK-PNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM-NLFDVITYNTLINGY 324
++ G PN V+Y ++G+ K + + D++T N +I+GY
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
GKI++ M N N TYN L++ K + + L + +IL G +PD
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789
Query: 385 ITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+T L+ + E +K+ + +GV + T+ ++S G
Sbjct: 790 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 838
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 203/478 (42%), Gaps = 56/478 (11%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ +I CK + A + R + G+ PN + ++ +I C+MG + A+++ E
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY---EA 498
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M + D T+N L+ CK GK+ AE+ M I+PN ++ LI+GY +
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558
Query: 121 LEEAFRLCDEMMK--------------KGL---------------------VMNSVIYNT 145
+AF + DEM K KGL +++V+YNT
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
++ + G++ L MV I PD +TY+ L GLCR G A F
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK------ 672
Query: 206 LIEDAFSHNILIN---YLCRSNNLSGAKQLLASMYVR------GLVPDIVTFGSLIDGHC 256
E N+L N Y C + + A Q A +Y R G PDIVT ++IDG+
Sbjct: 673 --EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 730
Query: 257 KEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVI 315
+ G +E + +M PNL YN +++G K + + D +
Sbjct: 731 RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL 790
Query: 316 TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM 375
T ++L+ G C S ++ A G+ + T+N LI+ C G I A +L+KVM
Sbjct: 791 TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 850
Query: 376 ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
G D T +++ ++ +E + M +G+ P + Y +++ L + G
Sbjct: 851 TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 188/431 (43%), Gaps = 3/431 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ A+CK L +A+S+F ++ I P+ T+ +I C+ G +A+ + E
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
++ P+ + Y C + G K G+ + +M P++ T +IDGYSR
Sbjct: 677 RG--NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGK 734
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+E+ L EM + N YN ++H D+ LL S++ N I PDK T
Sbjct: 735 IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 794
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G+C + + K + + D ++ N+LI+ C + ++ A L+ M G
Sbjct: 795 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 854
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ D T +++ + + + V +M K G P Y +INGLC+
Sbjct: 855 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914
Query: 301 XXXXXXXXMNLFDV-ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ + + ++ GK DEA M + A++ TL++
Sbjct: 915 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLC 974
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
CK G++ +A EL VM G D ++Y +LIT K +L++ M G + +
Sbjct: 975 CKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANA 1034
Query: 420 QTYKAVVSPLL 430
TYKA++ LL
Sbjct: 1035 TTYKALIRGLL 1045
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 5/295 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSL-KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
N++++ K K + + YRS+ +GI P+ +T + ++ C+ +++ LK+ ++
Sbjct: 758 NILLHGYSKR-KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI---LK 813
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+ D T+N LI C G++ A L M I + T ++ +R
Sbjct: 814 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 873
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+E+ + EM K+G+ S Y +I+ L GD++ ++ M+ ++I P S
Sbjct: 874 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAES 933
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ + L + G +EA +L+ L+ S L++ C++ N+ A +L M
Sbjct: 934 AMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNC 993
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
GL D+V++ LI G C +G++ A ++YE+M G N Y ++I GL E
Sbjct: 994 GLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE 1048
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 184/360 (51%), Gaps = 7/360 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ CKE + +A VF K + P VV+FN +I+ CK+G +D ++ +ME
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
RPD TY+ LI CK K+ A L +EM ++ ++PN + TLI G+SR
Sbjct: 304 SRT---RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ +M+ KGL + V+YNT+++ GD+ ++ M+ + PDK TY+
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G CR G+V A + ++ +N + D + L+ +C+ + A++ L M G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ PD VT+ ++D CK+G+ + ++ ++M G P++V YN ++NGLCK
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ + D ITYNTL+ G+ + + GI A+ A+Y +++N L
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY---IQKPEIGIVADLASYKSIVNEL 597
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 191/359 (53%), Gaps = 6/359 (1%)
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
+N L+ FCK G ++ A+K+ +E+ ++ + P V ++ TLI+GY + +L+E FRL +M
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
K + Y+ +I+ L E M+G L M + P+ ++ L G RNG ++
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
+ + K+L L D +N L+N C++ +L A+ ++ M RGL PD +T+ +LI
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL- 311
DG C+ G+VE A+++ ++M ++G + + V +++++ G+CKE +
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 312 FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
D +TY +++ +C G F M++ G + TYN L+N LCKLG ++ A L
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADML 542
Query: 372 MKVMILQGFVPDYITYTILITSFSKKC-SPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
+ M+ G VPD ITY L+ + S + I+ + G++ +YK++V+ L
Sbjct: 543 LDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI----GIVADLASYKSIVNEL 597
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 192/381 (50%), Gaps = 12/381 (3%)
Query: 20 FYRSLKHGIWP-NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIG 78
FY + +P NV FN++++ CK G + A KV + ++ S++P +++N LI
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDE---ITKRSLQPTVVSFNTLIN 283
Query: 79 GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVM 138
G+CK+G L +LK++M + P+V TY+ LI+ + ++ A L DEM K+GL+
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP 343
Query: 139 NSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFH 198
N VI+ T+IH G+++ + M+ + PD Y+ L G C+NG++ A
Sbjct: 344 NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 199 SKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
++ L D ++ LI+ CR ++ A ++ M G+ D V F +L+ G CKE
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE-EXXXXXXXXXXXXXXMNLFDVITY 317
G V +A + +M+++G KP+ V Y +++ CK+ + ++ V+TY
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
N L+NG C G++ A AM N G+ + TYNTL+ GH + A + +
Sbjct: 524 NVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE-----GHHRHANSSKRYIQK 578
Query: 378 Q--GFVPDYITYTILITSFSK 396
G V D +Y ++ +
Sbjct: 579 PEIGIVADLASYKSIVNELDR 599
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 158/305 (51%), Gaps = 1/305 (0%)
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
E++ G +N ++N +++ EG++ + + + P +++ L G C+ G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
N++E F+ ++ ++ D F+++ LIN LC+ N + GA L M RGL+P+ V F
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM 309
+LI GH + G ++ + Y+KM+ G +P++VLYN+++NG CK
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 310 NLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
L D ITY TLI+G+C G ++ A M GI + ++ L+ +CK G + A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 369 KELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSP 428
+ ++ M+ G PD +TYT+++ +F KK + KL M G +P TY +++
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 429 LLQEG 433
L + G
Sbjct: 530 LCKLG 534
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 211/434 (48%), Gaps = 12/434 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I LC+ KL A + K G++PNV T N+++D CK +D A + +M+
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD- 439
Query: 61 MSVYSI-RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
Y + PD IT+ LI G K+G++ A K+ +M++ D N Y +LI +
Sbjct: 440 ---YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
E+ ++ +M+ + + + NT + ++ G+ E + + R PD +YS
Sbjct: 497 RKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYS 556
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
IL GL + G NE ++ + E + D ++NI+I+ C+ ++ A QLL M +
Sbjct: 557 ILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK 616
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK----EEX 295
G P +VT+GS+IDG K ++ A ++E+ + N+V+Y+S+I+G K +E
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 296 XXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTL 355
NL+ T+N+L++ + +I+EA +MK N TY L
Sbjct: 677 YLILEELMQKGLTPNLY---TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 356 INFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
IN LCK+ +A + M QG P I+YT +I+ +K + E L D G
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 416 IPHKQTYKAVVSPL 429
+P Y A++ L
Sbjct: 794 VPDSACYNAMIEGL 807
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 208/434 (47%), Gaps = 5/434 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ L K K+ EA+ VF +K PN+ T+N++ID+ C+ G +D A ++ M+
Sbjct: 347 NCILTCLRKMGKVDEALKVF-EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
++ P+ T N ++ CK KL A + EM K P+ T+ +LIDG +
Sbjct: 406 AGLF---PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+++A+++ ++M+ NS++Y ++I + G E + M++ PD +
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ + G + +I + DA S++ILI+ L ++ + +L SM +G
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
V D + +IDG CK G V A Q+ E+M G +P +V Y SVI+GL K +
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 301 XXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ +V+ Y++LI+G+ G+IDEA+ + G+ N T+N+L++ L
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
K I +A + M P+ +TY ILI K + M +G+ P
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762
Query: 420 QTYKAVVSPLLQEG 433
+Y ++S L + G
Sbjct: 763 ISYTTMISGLAKAG 776
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 197/431 (45%), Gaps = 40/431 (9%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+I KE ++ A+S+ + ++V +N+ ID K+G +D+A K ++E
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE-- 265
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
++PD +TY +IG CK +L A ++ + + VP Y T+I GY A
Sbjct: 266 -ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+EA+ L + KG + + + YN ++ L G ++ + M + P+ TY+IL
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD-AAPNLSTYNIL 383
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
LCR G ++ AF+ + + L + + NI+++ LC+S L A + M +
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
PD +TF SLIDG K G V++A +VYEKM+ S + N ++Y S+I
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 302 XXXXXXXMN--------------------------LFDVI----------TYNTLINGYC 325
N +F+ I +Y+ LI+G
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
+G +E + ++MK G + YN +I+ CK G + +A +L++ M +GF P +
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 386 TYTILITSFSK 396
TY +I +K
Sbjct: 624 TYGSVIDGLAK 634
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 194/430 (45%), Gaps = 5/430 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I LCK +L EA+ +F K+ P +N +I G D A ++ +
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
SI P I YNC++ KMGK+ A K+ EM +KD PN+ TY LID RA L+
Sbjct: 339 --SI-PSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLD 394
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
AF L D M K GL N N ++ L ++ + M PD+ T+ L
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
GL + G V++A+K + K+L+++ ++ + LI ++ M +
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
PD+ + +D K G E ++E++ P+ Y+ +I+GL K
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 303 XXXXXXMN-LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
+ D YN +I+G+C GK+++A+ MK G TY ++I+ L K
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQT 421
+ + +A L + + + + Y+ LI F K +E + + ++ KG+ P+ T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 422 YKAVVSPLLQ 431
+ +++ L++
Sbjct: 695 WNSLLDALVK 704
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 193/430 (44%), Gaps = 5/430 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I K EA S+ R G P+V+ +N I+ KMG +D ALKV +M+
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ P+ TYN LI C+ GKL A +L++ M + + PNVRT ++D +++
Sbjct: 372 DAA----PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L+EA + +EM K + + + ++I L G ++ + M+D+ + Y+
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L K +G + K + ++ N D N ++ + ++ + + + R
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR 547
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
VPD ++ LI G K G +++ M + G + YN VI+G CK
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
V+TY ++I+G ++DEA+ K+ I N Y++LI+
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
K+G I +A +++ ++ +G P+ T+ L+ + K E + M P++
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 420 QTYKAVVSPL 429
TY +++ L
Sbjct: 728 VTYGILINGL 737
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 168/377 (44%), Gaps = 2/377 (0%)
Query: 58 MEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR 117
+++M + RP Y LIG F + M L +M E P V + TLI G+++
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 118 ARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFT 177
++ A L DEM L + V+YN I G ++ + N + PD+ T
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
Y+ + LC+ ++EA + + +N + +++N +I + A LL
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
+G +P ++ + ++ K G V+ A++V+E+M K PNL YN +I+ LC+
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLD 394
Query: 298 XXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
LF +V T N +++ C S K+DEA A M + T+ +LI
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
+ L K+G + A ++ + M+ + I YT LI +F E+ K++ M+ +
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 417 PHKQTYKAVVSPLLQEG 433
P Q + + + G
Sbjct: 515 PDLQLLNTYMDCMFKAG 531
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 147/298 (49%), Gaps = 7/298 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+++I+ L K E +FY + G + +N++ID CK G ++ A ++ +E
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL---LEE 612
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M P +TY +I G K+ +L A L E K I NV Y++LIDG+ +
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++EA+ + +E+M+KGL N +N+++ L ++ + SM + + P++ TY I
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GLC+ N+AF F ++ + + S+ +I+ L ++ N++ A L G
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG----EKPNLVLYNSVINGLCKEE 294
VPD + ++I+G +A ++E+ + G K +VL +++ C E+
Sbjct: 793 GVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQ 850
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 157/373 (42%)
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
MSV P T ++ G K KL + M + P Y TLI +S
Sbjct: 124 MSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNH 183
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ L +M + G ++ T+I EG ++ L+ M + + D Y++
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ G V+ A+KF +I N L D ++ +I LC++N L A ++ +
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
VP + ++I G+ G + A + E+ G P+++ YN ++ L K
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
++ TYN LI+ C +GK+D AF +M+ AG+ N T N +++ LC
Sbjct: 364 KVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
K + +A + + M + PD IT+ LI K ++ K+++ M+ +
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 421 TYKAVVSPLLQEG 433
Y +++ G
Sbjct: 484 VYTSLIKNFFNHG 496
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 153/340 (45%), Gaps = 4/340 (1%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
P++ N +D K G + K + E + PD+ +Y+ LI G K G
Sbjct: 515 PDLQLLNTYMDCMFKAGEPE---KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
+L M E+ V + R Y +IDG+ + + +A++L +EM KG V Y +VI
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
L ++ +L RI + YS L G + G ++EA+ ++++ L +
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
++ N L++ L ++ ++ A SM P+ VT+G LI+G CK A ++
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 270 KMMKSGEKPNLVLYNSVINGLCKE-EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG 328
+M K G KP+ + Y ++I+GL K + D YN +I G N
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811
Query: 329 KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
+ +AF+ + G+ ++ T L++ L K ++QA
Sbjct: 812 RAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 214/434 (49%), Gaps = 4/434 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+V+I LCK +L +A S+ G+ + T++++ID K D A +V +M V
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM-V 339
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+I+P Y+C I K G + A+ L + M+ ++P + YA+LI+GY R ++
Sbjct: 340 SHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ + + L EM K+ +V++ Y TV+ + GD++G ++ M+ + P+ Y+
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L K +N +A + ++ E + D F +N LI L ++ + A+ L M G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L P+ T+G+ I G+ + +A + ++M + G PN VL +IN CK+
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ D TY L+NG + K+D+A M+ GIA + +Y LIN
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
KLG++Q+A + M+ +G P+ I Y +L+ F + E+ +L D M +KG+ P+
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 420 QTYKAVVSPLLQEG 433
TY ++ + G
Sbjct: 698 VTYCTIIDGYCKSG 711
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 209/445 (46%), Gaps = 12/445 (2%)
Query: 1 NVVIYA-----LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
NVVIY + + +AM V + GI P++ +N +I K MD A +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
+M ++P++ TY I G+ + + A+K EM E ++PN LI+ Y
Sbjct: 511 VEM---VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
+ + EA M+ +G++ ++ Y +++ L+ ++ + M I PD
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
F+Y +L G + GN+ +A +++E L + +N+L+ CRS + AK+LL
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
M V+GL P+ VT+ ++IDG+CK G++ A +++++M G P+ +Y ++++G C+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 296 XXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGI----AANHAT 351
+N LIN GK + + + N T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 352 YNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV 411
YN +I++LCK G+++ AKEL M +P ITYT L+ + K E+ + D +
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 412 LKGVIPHKQTYKAVVSPLLQEGVET 436
G+ P Y +++ L+EG+ T
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTT 892
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 192/405 (47%), Gaps = 14/405 (3%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
G+ PN V +I+ CK G + ++ S M I D+ TY L+ G K K+
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKV---IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
AE++ EM K I P+V +Y LI+G+S+ ++++A + DEM+++GL N +IYN +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
+ G++E L+ M + P+ TY + G C++G++ EAF+ ++ L
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
+ D+F + L++ CR N++ A + + +G F +LI+ K G E +
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTE 787
Query: 267 VYEKMMKSG----EKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLI 321
V ++M KPN V YN +I+ LCKE NL VITY +L+
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Query: 322 NGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFV 381
NGY G+ E F AGI +H Y+ +IN K G +A L+ M + V
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907
Query: 382 PDYITYTI-----LITSFSKKCSPEEVIKLHDYMVLKGVIPHKQT 421
D +I L++ F+K E K+ + MV IP T
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 214/486 (44%), Gaps = 54/486 (11%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME-- 59
V++ AL + +L V+ ++ + +V T++M+I C+ G + L V+ K E
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 60 ----------------VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVP 103
M + P TY+ LI G CK+ +L A+ L EM +
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 104 NVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLI 163
+ TY+ LIDG + R+ + A L EM+ G+ + +Y+ I + EG ME L
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 164 SSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRS 223
M+ + + P Y+ L +G CR NV + ++ ++ + N++ +++ ++ +C S
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 224 NNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLY 283
+L GA ++ M G P++V + +LI + +A++V ++M + G P++ Y
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 284 NSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVITY---------------------- 317
NS+I GL K +E N F +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 318 ----------NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQ 367
LIN YC GK+ EA + +M + GI + TY L+N L K +
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 368 AKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
A+E+ + M +G PD +Y +LI FSK + ++ + D MV +G+ P+ Y ++
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 428 PLLQEG 433
+ G
Sbjct: 671 GFCRSG 676
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 198/425 (46%), Gaps = 76/425 (17%)
Query: 8 CKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIR 67
CK+ K++EA S + + GI + T+ ++++ K +D A ++ +M I
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG---IA 624
Query: 68 PDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRL 127
PD +Y LI GF K+G + A + +EM+E+ + PNV Y L+ G+ R+ +E+A L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 128 CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR 187
DEM KGL N+V Y T+I GD+ L M + PD F Y+ L G CR
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 188 -------------------------NGNVNEAFKFHSKILE----NNLIEDAF------- 211
N +N FKF L+ N L++ +F
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 212 --SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
++NI+I+YLC+ NL AK+L M L+P ++T+ SL++G+ K G V++
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 270 KMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGK 329
+ + +G +P+ ++Y+ +IN KE +T L+
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEG--------------------MTTKALV-------L 897
Query: 330 IDEAFAFSFAMKNA---GIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYIT 386
+D+ FA KNA G + +T L++ K+G ++ A+++M+ M+ ++PD T
Sbjct: 898 VDQMFA-----KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Query: 387 YTILI 391
LI
Sbjct: 953 VIELI 957
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 180/436 (41%), Gaps = 38/436 (8%)
Query: 34 TFNMIIDVACKMGAMDLALKVVSKM-----EVMSVYS--IR---------PDSITYNCLI 77
+F+ + C G+ + AL VV +M V V+S +R D + + L
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158
Query: 78 GGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLV 137
G+ G + A + + M ++VP + L+D R L+ + + M+++ +V
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218
Query: 138 MN---------------------SVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKF 176
+ V++ T + +++G L SM+ + P K+
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY 278
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
TY +L GLC+ + +A ++ + D ++++LI+ L + N AK L+ M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXX 296
G+ + I KEG +E A +++ M+ SG P Y S+I G C+E+
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 297 XXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTL 355
N+ TY T++ G C+SG +D A+ M +G N Y TL
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 356 INFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
I + A ++K M QG PD Y LI SK +E MV G+
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 416 IPHKQTYKAVVSPLLQ 431
P+ TY A +S ++
Sbjct: 519 KPNAFTYGAFISGYIE 534
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 7/224 (3%)
Query: 8 CKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSI- 66
C+ + A+++F + K G + FN +I+ K G +L +V++++ S
Sbjct: 743 CRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
+P+ +TYN +I CK G L A++L ++M +++P V TY +L++GY + E F
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI-----L 181
+ DE + G+ + ++Y+ +I+ EG +L+ M D SI L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNN 225
G + G + A K ++ I D+ + LIN C S+N
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 13/259 (5%)
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
D + IL G G + EA S + L+ +L++ L R N L +
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 234 ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
M R +V D+ T+ LI HC+ GNV+ V K K L ++G K
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLN-----VDGALKL 264
Query: 294 EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYN 353
+ TY+ LI+G C ++++A + M + G++ ++ TY+
Sbjct: 265 KESMICKGLVPLKY--------TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 354 TLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLK 413
LI+ L K + AK L+ M+ G Y I SK+ E+ L D M+
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 414 GVIPHKQTYKAVVSPLLQE 432
G+IP Q Y +++ +E
Sbjct: 377 GLIPQAQAYASLIEGYCRE 395
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 107/281 (38%), Gaps = 40/281 (14%)
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNL-IEDAFSHNILINYLCRSNNLSGAKQLLAS 235
++S L LC G+ +A +++E N + + +S + S
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVR-----------------CS 141
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
G D V FG L DG+ +G +E AV V+ M P L +++ L +
Sbjct: 142 QEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR 201
Query: 296 XXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKI---------------------DEA 333
N+ FDV TY+ LI +C +G + D A
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGA 261
Query: 334 FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
+M G+ TY+ LI+ LCK+ ++ AK L+ M G D TY++LI
Sbjct: 262 LKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDG 321
Query: 394 FSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
K + + L MV G+ Y + + +EGV
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 210/425 (49%), Gaps = 4/425 (0%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
K +A S+F L+ P++V F ++ V KM D+ + + KME + I D
Sbjct: 588 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLG---ISHDLY 644
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
++ LI FC+ +L++A L +MM+ P++ T +L++G+ + +EA L D M
Sbjct: 645 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 704
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
G V N VIYNTVI+ L D+ + M I D TY+ L GL +G
Sbjct: 705 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 764
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
+A + +++ + + LI+ + NL A+ L M R +VP++ T+ SL
Sbjct: 765 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 824
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
I+G C G + +A +++ M+ G P++V YN++I G CK + L
Sbjct: 825 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 884
Query: 312 F-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
D TYNTLI+GYC +GK++ A M + G++ + TYN L++ LC G I++A
Sbjct: 885 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 944
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLL 430
+++ + D ITY I+I + +E L + KGV P Y ++S L
Sbjct: 945 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 1004
Query: 431 QEGVE 435
++G++
Sbjct: 1005 RKGLQ 1009
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 203/403 (50%), Gaps = 7/403 (1%)
Query: 18 SVFYRSLK---HGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
+V Y S K +GI ++ +F ++I C+ + AL V+ KM + P +T+
Sbjct: 89 TVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGY---EPSIVTFG 145
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
L+ GFC + ++ A L M++ PNV Y TLIDG + L A L +EM KK
Sbjct: 146 SLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
GL + V YNT++ L G + ++ M+ I PD T++ L + GN++EA
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
+ + +++++++ + ++N +IN LC L AK+ M +G P++VT+ +LI G
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-D 313
CK V+ ++++++M G ++ YN++I+G C+ + D
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 314 VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
+IT+ L++G C +G+I+ A M+ + YN +I+ LCK +++A EL
Sbjct: 386 IITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFC 445
Query: 374 VMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
+ ++G PD TYTI+I K E +L M +G+I
Sbjct: 446 RLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 192/403 (47%), Gaps = 37/403 (9%)
Query: 6 ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYS 65
C+ + EA+S+ G PNVV +N +I+ CK ++ AL+V ME
Sbjct: 687 GFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG--- 743
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
IR D++TYN LI G G+ T A +L +M+++ I PNV + LID + + +L EA
Sbjct: 744 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 803
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
L EM+++ +V N YN++I+ + G + + MV PD TY+ L G
Sbjct: 804 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 863
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
C++ V + K ++ L+ DAF++N LI+ C++ L+ A+++ M G+ PDI
Sbjct: 864 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 923
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXX 305
VT+ L+D C G +E A+ + E + KS +++ YN +I GLC+ +
Sbjct: 924 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD----------- 972
Query: 306 XXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
K+ EA+ ++ G+ + Y T+I+ LC+ G
Sbjct: 973 -----------------------KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 1009
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHD 408
++A +L + M GF+P Y + S E + H+
Sbjct: 1010 READKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKAAHE 1052
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 204/458 (44%), Gaps = 74/458 (16%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
+ +A ++F+ + P++V F ++ + + + KME+ Y I D
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMEL---YGISHDLY 107
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
++ LI FC+ +L+ A + +MM+ P++ T+ +L+ G+ + +AF L M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
+K G N V+YNT L GLC+NG +
Sbjct: 168 VKSGYEPNVVVYNT-----------------------------------LIDGLCKNGEL 192
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
N A + +++ + L D ++N L+ LC S S A ++L M R + PD+VTF +L
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
ID K+GN++ A ++Y++M++S PN V YNS+INGLC
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312
Query: 312 F-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
F +V+TYNTLI+G+C +DE M G A+ TYNTLI+ C++G ++ A +
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 371 LMKVMILQGFVPDYIT-----------------------------------YTILITSFS 395
+ M+ + PD IT Y I+I
Sbjct: 373 IFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432
Query: 396 KKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
K E+ +L + ++GV P +TY ++ L + G
Sbjct: 433 KADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 191/381 (50%), Gaps = 4/381 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
++I+ C+ +L A+SV + +K G P++VTF ++ C + + A +V M V
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM-VK 169
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
S Y P+ + YN LI G CK G+L +A +L NEM +K + +V TY TL+ G +
Sbjct: 170 SGYE--PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+A R+ +MMK+ + + V + +I +G+++ L M+ + + P+ TY+ +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
GLC +G + +A K + + ++N LI+ C+ + +L M G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC-KEEXXXXXX 300
DI T+ +LI G+C+ G + A+ ++ M+ P+++ + +++GLC E
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
++ YN +I+G C + K+++A+ + G+ + TY +I LC
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 361 KLGHIQQAKELMKVMILQGFV 381
K G ++A EL++ M +G +
Sbjct: 468 KNGPRREADELIRRMKEEGII 488
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 150/287 (52%), Gaps = 3/287 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I L + +A + +K I PNV+ F +ID K G + A + +M
Sbjct: 752 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 811
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
SV P+ TYN LI GFC G L A+ + + M+ K P+V TY TLI G+ +++
Sbjct: 812 RSVV---PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 868
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+E+ +L EM +GLV ++ YNT+IH G + + + MVD + PD TY+I
Sbjct: 869 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 928
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L LC NG + +A + ++ + D ++NI+I LCR++ L A L S+ +G
Sbjct: 929 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 988
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI 287
+ PD + + ++I G C++G A ++ +M + G P+ +Y+ +
Sbjct: 989 VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 1035
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 142/275 (51%), Gaps = 3/275 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ LC + +A + +K I P+VVTF +IDV K G +D A ++ +M +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM-I 273
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S S+ P+++TYN +I G C G+L A+K + M K PNV TY TLI G+ + R
Sbjct: 274 QS--SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++E +L M +G + YNT+IH G + + MV R+ PD T+ I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GLC NG + A + E+ ++NI+I+ LC+++ + A +L + V G
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
+ PD T+ +I G CK G A ++ +M + G
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 199/486 (40%), Gaps = 55/486 (11%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I LC +L +A F G +PNVVT+N +I CK +D +K+ +
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR--- 341
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
MS D TYN LI G+C++GKL +A + M+ + + P++ T+ L+ G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+E A D+M + + V YN +IH L +E L + + PD TY+I
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNN--LSGAKQLLASMYV 238
+ GLC+NG EA + ++ E +I + + + SN G+ Q L ++
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLGSAQSLREIWE 521
Query: 239 RG---------LVPDIVTFGSLIDGHCK-------EGN---------------------- 260
R L+P + F S + G + GN
Sbjct: 522 RSKSNPFWMQRLIP--IAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRER 579
Query: 261 ---------VENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
++A ++ +M++S P++V + V+ + K + +
Sbjct: 580 LRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGI 639
Query: 312 -FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
D+ ++ LI+ +C ++ A A M G + T +L+N C+ Q+A
Sbjct: 640 SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 699
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLL 430
L+ M GFVP+ + Y +I K +++ M KG+ TY ++S L
Sbjct: 700 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 759
Query: 431 QEGVET 436
G T
Sbjct: 760 NSGRWT 765
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 123/254 (48%), Gaps = 3/254 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+I KE LLEA +++ ++ + PNV T+N +I+ C G + A + M
Sbjct: 788 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 847
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
+ PD +TYN LI GFCK ++ KL EM + +V + TY TLI GY +A L
Sbjct: 848 GCF---PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 904
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
A ++ + M+ G+ + V YN ++ L G +E +++ + + + D TY+I+
Sbjct: 905 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 964
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
+GLCR + EA+ + + DA ++ +I+ LCR A +L M G
Sbjct: 965 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 1024
Query: 242 VPDIVTFGSLIDGH 255
+P + + H
Sbjct: 1025 MPSERIYDETLRDH 1038
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 218/467 (46%), Gaps = 38/467 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N V+ +CK ++ A + + + G P+V+++N +ID C+ G + A V+ +
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119
Query: 61 MSVYSIRPDSITYNCLIGGF----------------------------------CKMGKL 86
+ +PD +++N L GF CK G+L
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
+A K + M + PNV T+ LIDGY +A LE A L EM + + +N V Y +
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
I +G+M+ + S MV++R+ P+ Y+ + G + G+ + A KF +K+L +
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
D ++ ++I+ LC + L A +++ M LVPD+V F ++++ + K G ++ AV
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCN 326
+Y K+++ G +P++V +++I+G+ K + + Y LI+ C
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND----VMYTVLIDALCK 415
Query: 327 SGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYIT 386
G E + AG+ + Y + I LCK G++ A +L M+ +G + D +
Sbjct: 416 EGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLA 475
Query: 387 YTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
YT LI + K E ++ D M+ G+ P + ++ +EG
Sbjct: 476 YTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 193/421 (45%), Gaps = 39/421 (9%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
K+L+ + V+ + PNVVT++ ID CK G + LALK M ++ P+ +
Sbjct: 143 KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALK---SFHSMKRDALSPNVV 199
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
T+ CLI G+CK G L +A L EM + NV TY LIDG+ + ++ A + M
Sbjct: 200 TFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM 259
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
++ + NS++Y T+I + GD + ++ M++ + D Y ++ GLC NG +
Sbjct: 260 VEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKL 319
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
EA + + +++L+ D ++N +S + A + + RG PD+V ++
Sbjct: 320 KEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTM 379
Query: 252 IDG-------H-----------------------CKEGNVENAVQVYEKMMKSGEKPNLV 281
IDG H CKEG+ +++ K+ ++G P+
Sbjct: 380 IDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKF 439
Query: 282 LYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAM 340
+Y S I GLCK+ L D++ Y TLI G + G + EA M
Sbjct: 440 MYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEM 499
Query: 341 KNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSP 400
N+GI+ + A ++ LI K G++ A +L+ M +G V + SK+C
Sbjct: 500 LNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVT-----AVSDADCSKQCGN 554
Query: 401 E 401
E
Sbjct: 555 E 555
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 187/427 (43%), Gaps = 51/427 (11%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFN----MIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDS 70
EA+ R K P+ T N +I+ C + ++ +VS+ P
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSR-------GYTPHR 56
Query: 71 ITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDE 130
++N ++ CK+G++ AE + + M P+V +Y +LIDG+ R
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCR------------- 103
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNR---IPPDKFTYSILTKGLCR 187
GD+ SL++ S+ + PD +++ L G +
Sbjct: 104 ----------------------NGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK 141
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
++E F + +L+ + +++ I+ C+S L A + SM L P++VT
Sbjct: 142 MKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVT 200
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE-EXXXXXXXXXXXX 306
F LIDG+CK G++E AV +Y++M + N+V Y ++I+G CK+ E
Sbjct: 201 FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260
Query: 307 XXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
+ + Y T+I+G+ G D A F M N G+ + Y +I+ LC G ++
Sbjct: 261 EDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK 320
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
+A E+++ M VPD + +T ++ ++ K + + ++ ++ +G P ++
Sbjct: 321 EATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Query: 427 SPLLQEG 433
+ + G
Sbjct: 381 DGIAKNG 387
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 144/310 (46%), Gaps = 38/310 (12%)
Query: 1 NVVIY-----ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
NVV Y CK+ ++ A ++ R ++ + PN + + IID + G D A+K +
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
+KM +R D Y +I G C GKL A ++ +M + D+VP++ + T+++ Y
Sbjct: 292 AKMLNQG---MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348
Query: 116 SRARSLEEAFRLCDEMMKKGL------------------------------VMNSVIYNT 145
++ ++ A + +++++G N V+Y
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTV 408
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
+I L EGD V L S + + + PDKF Y+ GLC+ GN+ +AFK +++++
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
L+ D ++ LI L + A+Q+ M G+ PD F LI + KEGN+ A
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAAS 528
Query: 266 QVYEKMMKSG 275
+ M + G
Sbjct: 529 DLLLDMQRRG 538
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 5/247 (2%)
Query: 191 VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGS 250
V EA +F S++ +++ + D F+ N I+ L SN + + LA + RG P +F S
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 251 LIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN 310
++ CK G V+ A + M + G +P+++ YNS+I+G C+ +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 311 LF----DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
F D++++N+L NG+ +DE F + M + N TY+T I+ CK G +Q
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQ 180
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
A + M P+ +T+T LI + K E + L+ M + + TY A++
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 427 SPLLQEG 433
++G
Sbjct: 241 DGFCKKG 247
>AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2321740-2324382 REVERSE
Length = 880
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 223/472 (47%), Gaps = 42/472 (8%)
Query: 3 VIYALCKECKLLEAMSVF-YRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
++ C+ L +A+ VF S + PN V+++++I C++G ++ A + +M
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM--- 292
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
+P + TY LI C G + A L +EM+ + PNV TY LIDG R +
Sbjct: 293 GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI 352
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
EEA +C +M+K + + + YN +I+ +G + L++ M P+ T++ L
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
+GLCR G +A ++L+N L D S+N+LI+ LCR +++ A +LL+SM +
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
PD +TF ++I+ CK+G + A M++ G + V ++I+G+CK
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 302 XXXXXXXMNLF------------------------------------DVITYNTLINGYC 325
M + V+TY TL++G
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
SG I +F MK +G N Y +IN LC+ G +++A++L+ M G P+++
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSP--LLQEGVE 435
TYT+++ + + ++ MV +G + + Y +++ L Q+G++
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGID 704
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 209/470 (44%), Gaps = 40/470 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++ ALCK A + LK G + ++ C+ + ALKV +V
Sbjct: 199 RTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKV---FDV 255
Query: 61 MSV-YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
MS + P+S++Y+ LI G C++G+L A LK++M EK P+ RTY LI
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+++AF L DEM+ +G N Y +I L +G +E + + MV +RI P TY+
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L G C++G V AF+ + + + + + N L+ LCR A LL M
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
GL PDIV++ LIDG C+EG++ A ++ M +P+ + + ++IN CK+
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 300 XXXXXXXXXMNL-FDVITYNTLINGYCNSG------------------------------ 328
+ D +T TLI+G C G
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 329 -----KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPD 383
K+ E A + G+ + TY TL++ L + G I + ++++M L G +P+
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 384 YITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
YTI+I + EE KL M GV P+ TY +V + G
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 200/491 (40%), Gaps = 96/491 (19%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ LC+ K +A+ + R L +G+ P++V++N++ID C+ G M+ A K++S M
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM-- 467
Query: 61 MSVYSIRPDSITYNC-----------------------------------LIGGFCKMGK 85
+ + I PD +T+ LI G CK+GK
Sbjct: 468 -NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526
Query: 86 LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNT 145
A + +++ I+ + ++D S+ ++E + ++ K GLV + V Y T
Sbjct: 527 TRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTT 586
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
++ L GD+ G ++ M + P+ + Y+I+ GLC+ G V EA
Sbjct: 587 LVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA----------- 635
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
++LL++M G+ P+ VT+ ++ G+ G ++ A+
Sbjct: 636 ------------------------EKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLC-KEEXXXXXXXXXXXXXXMNLFDVITYNTLIN-- 322
+ M++ G + N +Y+S++ G ++ + D N LI+
Sbjct: 672 ETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVV 731
Query: 323 ----------------GYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
C G+ DE+ + G+ A + ++ K H
Sbjct: 732 EQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKH-T 790
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKL-HDYMVLKGVIPHKQTYKAV 425
+ EL+ +++ GFVP + ++ ++I K+ E +L + + GV+ V
Sbjct: 791 KCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYV 850
Query: 426 VSPLLQEGVET 436
L EG ET
Sbjct: 851 --ECLMEGDET 859
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 37/277 (13%)
Query: 194 AFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLID 253
A+ + ++ + + + ++N LC++ A+ ++ + G V D SL+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 254 GHCKEGNVENAVQVYEKMMKSGE-KPNLVLYNSVINGLCK----EEX------------- 295
G C+ N+ +A++V++ M K PN V Y+ +I+GLC+ EE
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 296 ---------XXXXXXXXXXXXXMNLFD----------VITYNTLINGYCNSGKIDEAFAF 336
NLFD V TY LI+G C GKI+EA
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 337 SFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
M I + TYN LIN CK G + A EL+ VM + P+ T+ L+ +
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 397 KCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
P + + L M+ G+ P +Y ++ L +EG
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455
>AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: F mature embryo stage, C globular
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 25910 Blast hits to 6027
proteins in 187 species: Archae - 6; Bacteria - 20;
Metazoa - 625; Fungi - 635; Plants - 23410; Viruses - 0;
Other Eukaryotes - 1214 (source: NCBI BLink). |
chr2:7462820-7465740 FORWARD
Length = 874
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 210/437 (48%), Gaps = 13/437 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ + C+E + ++ + + + G+ P++VTFN I CK G + A ++ S ME+
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Query: 61 MSVYSI-RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+ RP+SITYN ++ GFCK+G L A+ L + E D + ++++Y + G R
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHG 340
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
EA + +M KG+ + YN ++ L G + ++ M N + PD TY
Sbjct: 341 KFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYG 400
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L G C G V+ A +++ NN + +A++ NIL++ L + +S A++LL M +
Sbjct: 401 CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G D VT ++DG C G ++ A+++ + M G L NS I GL +
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI-GLVDDSLIENN 519
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
L D+ITY+TL+NG C +G+ EA M + + YN I+
Sbjct: 520 C----------LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHF 569
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
CK G I A ++K M +G TY LI K E+ L D M KG+ P+
Sbjct: 570 CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNI 629
Query: 420 QTYKAVVSPLLQ-EGVE 435
TY + L + E VE
Sbjct: 630 CTYNTAIQYLCEGEKVE 646
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 215/457 (47%), Gaps = 37/457 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I ALC + A +F + G PN TF +++ CK G D L++++ ME
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME- 209
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ + P+ + YN ++ FC+ G+ +EK+ +M E+ +VP++ T+ + I +
Sbjct: 210 --SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 121 LEEAFRLCDEMMKK---GLVM-NSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKF 176
+ +A R+ +M GL NS+ YN ++ G +E L S+ +N
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
+Y+I +GL R+G EA ++ + + +S+NIL++ LC+ LS AK ++ M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXX 296
G+ PD VT+G L+ G+C G V+ A + ++MM++ PN N +++ L K
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK---M 444
Query: 297 XXXXXXXXXXXXMNL----FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAA----- 347
MN D +T N +++G C SG++D+A M+ G AA
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 348 ------------------NHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
+ TY+TL+N LCK G +AK L M+ + PD + Y I
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 390 LITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
I F K+ ++ M KG +TY +++
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 204/439 (46%), Gaps = 30/439 (6%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+ + L + K +EA +V + GI P++ ++N+++D CK+G + A +V +
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG---L 386
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M + PD++TY CL+ G+C +GK+ A+ L EMM + +PN T L+ +
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEG---------------------- 158
+ EA L +M +KG +++V N ++ L G+++
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 159 -VSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILI 217
+ L+ S+++N PD TYS L GLC+ G EA ++++ L D+ ++NI I
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 218 NYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEK 277
++ C+ +S A ++L M +G + T+ SLI G + + + ++M + G
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 278 PNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAF-A 335
PN+ YN+ I LC+ E N+ +V ++ LI +C D A
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV 686
Query: 336 FSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFS 395
F A+ G Y+ + N L G + +A EL++ ++ +GF Y L+ S
Sbjct: 687 FETAVSICG--QKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLC 744
Query: 396 KKCSPEEVIKLHDYMVLKG 414
KK E + M+ +G
Sbjct: 745 KKDELEVASGILHKMIDRG 763
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 185/391 (47%), Gaps = 10/391 (2%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKM-EVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
P+V +N++++ K + ++ VS + + M + I P + T+N LI C +
Sbjct: 110 PSVYLYNLLLESCIK----ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A +L +EM EK PN T+ L+ GY +A ++ L + M G++ N VIYNT++
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI- 207
EG + ++ M + + PD T++ LC+ G V +A + S + + +
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 208 ---EDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA 264
++ ++N+++ C+ L AK L S+ + + ++ + G + G A
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 265 VQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLING 323
V ++M G P++ YN +++GLCK + D +TY L++G
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 324 YCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPD 383
YC+ GK+D A + M N T N L++ L K+G I +A+EL++ M +G+ D
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465
Query: 384 YITYTILITSFSKKCSPEEVIKLHDYMVLKG 414
+T I++ ++ I++ M + G
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 152/336 (45%), Gaps = 5/336 (1%)
Query: 103 PNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLL 162
P+V Y L++ + R +E L +M+ G+ + +N +I L ++ L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 163 ISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR 222
M + P++FT+ IL +G C+ G ++ + + + ++ + +N +++ CR
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG----EKP 278
+++++ M GLVPDIVTF S I CKEG V +A +++ M +P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 279 NLVLYNSVINGLCKEEXXXXXXXXXXXXXXM-NLFDVITYNTLINGYCNSGKIDEAFAFS 337
N + YN ++ G CK +L + +YN + G GK EA
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 338 FAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK 397
M + GI + +YN L++ LCKLG + AK ++ +M G PD +TY L+ +
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 398 CSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ L M+ +P+ T ++ L + G
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 163/383 (42%), Gaps = 35/383 (9%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++++L K ++ EA + + + G + VT N+I+D C G +D A+++V M V
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
Query: 61 MSVYSIR--------------------PDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKD 100
++ PD ITY+ L+ G CK G+ A+ L EMM +
Sbjct: 495 HGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK 554
Query: 101 IVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVS 160
+ P+ Y I + + + AFR+ +M KKG + YN++I L ++ + +
Sbjct: 555 LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 161 LLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYL 220
L+ M + I P+ TY+ + LC V +A ++++ N+ + FS LI
Sbjct: 615 GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Query: 221 CRSNNLSGAKQLLASMYV-----RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
C+ + A+++ + GL + F L+ G + A ++ E ++ G
Sbjct: 675 CKVPDFDMAQEVFETAVSICGQKEGLYS--LMFNELLAA----GQLLKATELLEAVLDRG 728
Query: 276 EKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAF 334
+ LY ++ LCK++ FD +I+G G EA
Sbjct: 729 FELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEAN 788
Query: 335 AFS---FAMKNAGIAANHATYNT 354
+F+ M + G AN N
Sbjct: 789 SFADKMMEMASVGEVANKVDPNA 811
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 219/468 (46%), Gaps = 35/468 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N VI C+ +L +A+ + G ++VT+ ++ID CK G MD A+ + +M+
Sbjct: 181 NTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF 240
Query: 61 MS------VYS--IR------------------------PDSITYNCLIGGFCKMGKLTM 88
M VY+ IR P +ITYN LI GFCK+G+L
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A ++ M+E+ + PNV TY LIDG +EA +L + M++K N+V YN +I+
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIIN 360
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN--L 206
L +G + ++ M R PD TY+IL GLC G+++EA K +L+++
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
D S+N LI+ LC+ N L A + + + D VT L++ K G+V A++
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYC 325
+++++ S N Y ++I+G CK L V YN L++ C
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
G +D+A+ M+ + ++N +I+ K G I+ A+ L+ M G PD
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
TY+ LI F K +E I D MV G P +V+ + +G
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG 648
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 219/437 (50%), Gaps = 8/437 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ LC+ + +A+S+ ++ + P+V ++N +I C+ ++ AL++ ++M+
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 61 MSV-YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+S+ +T+ LI FCK GK+ A EM + ++ Y +LI G+
Sbjct: 206 SGCSWSL----VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
L+ L DE++++G ++ YNT+I G ++ S + M++ + P+ +TY+
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L GLC G EA + + ++E + +A ++NI+IN LC+ ++ A +++ M R
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE--KPNLVLYNSVINGLCKE-EXX 296
PD +T+ L+ G C +G+++ A ++ M+K P+++ YN++I+GLCKE
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 297 XXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
+ D +T N L+N +G +++A + ++ I N TY +I
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
+ CK G + AK L+ M + P Y L++S K+ S ++ +L + M
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF 561
Query: 417 PHKQTYKAVVSPLLQEG 433
P ++ ++ L+ G
Sbjct: 562 PDVVSFNIMIDGSLKAG 578
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 192/422 (45%), Gaps = 6/422 (1%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
A S + + L+ + N V+ + +++ +M A V++ +M + +N
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA---LMLKRGFAFNVYNHNI 147
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
L+ G C+ + A L EM ++P+V +Y T+I G+ + LE+A L +EM G
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
+ V + +I G M+ + M + D Y+ L +G C G ++
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267
Query: 196 KFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGH 255
++LE A ++N LI C+ L A ++ M RG+ P++ T+ LIDG
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 256 CKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DV 314
C G + A+Q+ M++ E+PN V YN +IN LCK+ D
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAM--KNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
ITYN L+ G C G +DEA + M ++ + +YN LI+ LCK + QA ++
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
+++ + D +T IL+ S K + ++L + ++ + TY A++ +
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 433 GV 434
G+
Sbjct: 508 GM 509
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 191/386 (49%), Gaps = 6/386 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I CK +L EA +F ++ G+ PNV T+ +ID C +G AL++++ +
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN---L 342
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M P+++TYN +I CK G + A ++ M ++ P+ TY L+ G
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 121 LEEAFRLCDEMMKKGLVMNS--VIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
L+EA +L M+K + + YN +IH L E + + +V+ D+ T
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+IL + G+VN+A + +I ++ ++ ++ ++ +I+ C++ L+ AK LL M V
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXX 298
L P + + L+ CKEG+++ A +++E+M + P++V +N +I+G K
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582
Query: 299 XXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
L D+ TY+ LIN + G +DEA +F M ++G + ++++
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPD 383
+ G + EL+K ++ + V D
Sbjct: 643 YCISQGETDKLTELVKKLVDKDIVLD 668
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 128/256 (50%), Gaps = 3/256 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I+ LCKE +L +A+ ++ ++ + VT N++++ K G ++ A+++ ++
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI-- 485
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S I +S TY +I GFCK G L +A+ L +M ++ P+V Y L+ + S
Sbjct: 486 -SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L++A+RL +EM + + V +N +I GD++ L+ M + PD FTYS
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + G ++EA F K++++ DA + ++ Y +L+ + +
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKD 664
Query: 241 LVPDIVTFGSLIDGHC 256
+V D +++D C
Sbjct: 665 IVLDKELTCTVMDYMC 680
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 4/234 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ + K + +AM ++ + I N T+ +ID CK G +++A ++ KM V
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
++P YNCL+ CK G L A +L EM + P+V ++ +IDG +A
Sbjct: 523 ---SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ A L M + GL + Y+ +I+ G ++ MVD+ PD
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSN-NLSGAKQLL 233
+ K G ++ + K+++ +++ D +++Y+C S+ N+ AK+LL
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 201/411 (48%), Gaps = 10/411 (2%)
Query: 9 KECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRP 68
K+ KLL+ M+ GI PNV + + I C+ M+ A K+ E+M + + P
Sbjct: 217 KKEKLLDEMTSL------GIKPNVYIYTIYILDLCRDNKMEEAEKM---FELMKKHGVLP 267
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
+ TY+ +I G+CK G + A L E++ +++PNV + TL+DG+ +AR L A L
Sbjct: 268 NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLF 327
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
M+K G+ N +YN +IH G+M L+S M + PD FTY+IL GLC
Sbjct: 328 VHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIE 387
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
V EA + K+ + + ++N LI+ C+ N+ A L + M G+ P+I+TF
Sbjct: 388 DQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITF 447
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
+LIDG+C +++ A+ +Y +M G P++V Y ++I+ KE
Sbjct: 448 STLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Query: 309 MNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQ 367
+ + T+ L++G+ G++ A F NH + LI LC+ G+I +
Sbjct: 508 AGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILR 567
Query: 368 AKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
A M G PD +Y ++ ++ + + L M+ G++P+
Sbjct: 568 ASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 190/400 (47%), Gaps = 7/400 (1%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
F+++I +MG + AL V +M+ PDS ++ G + +
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREMKC------SPDSKACLSILNGLVRRRRFDSVWVDYQ 188
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG 154
M+ + +VP+V Y L + + +L DEM G+ N IY I L +
Sbjct: 189 LMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDN 248
Query: 155 DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHN 214
ME + M + + P+ +TYS + G C+ GNV +A+ + +IL L+ +
Sbjct: 249 KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFG 308
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
L++ C++ L A+ L M G+ P++ + LI GHCK GN+ AV + +M
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 275 GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEA 333
P++ Y +INGLC E+ +F TYN+LI+GYC +++A
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 334 FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
M +G+ N T++TLI+ C + I+ A L M ++G VPD +TYT LI +
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Query: 394 FSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
K+ + +E ++L+ M+ G+ P+ T+ +V +EG
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEG 528
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 200/402 (49%), Gaps = 21/402 (5%)
Query: 1 NVVIYA-----LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
NV IY LC++ K+ EA +F KHG+ PN+ T++ +ID CK G + A +
Sbjct: 233 NVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLY 292
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
++ V + P+ + + L+ GFCK +L A L M++ + PN+ Y LI G+
Sbjct: 293 KEILVAELL---PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
++ ++ EA L EM L + Y +I+ L +E + + L M + RI P
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSS 409
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
TY+ L G C+ N+ +A S++ + + + + + LI+ C ++ A L
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE-E 294
M ++G+VPD+VT+ +LID H KE N++ A+++Y M+++G PN + +++G KE
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Query: 295 XXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNT 354
+ ++ + + LI G C +G I A F M++ GI + +Y +
Sbjct: 530 LSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVS 589
Query: 355 LINFLCKLGHIQQAKELMKVMILQ------GFVPDYITYTIL 390
++ GH+Q+ K + M+LQ G +P+ + +L
Sbjct: 590 MLK-----GHLQE-KRITDTMMLQCDMIKTGILPNLLVNQLL 625
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
AM +++ GI P+VVT+ +ID K M AL++ S M ++ P+ T+ C
Sbjct: 463 AMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH---PNDHTFAC 519
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
L+ GF K G+L++A E ++ N + LI+G + + A R +M G
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
+ + Y +++ E + +L M+ I P+ +L + NG V A
Sbjct: 580 ITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-E 59
+I A KE + EA+ ++ L+ GI PN TF ++D K G + +A+ + +
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQ 542
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
S + + + + CLI G C+ G + A + ++M I P++ +Y +++ G+ + +
Sbjct: 543 QRSCW----NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEK 598
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISS 165
+ + L +M+K G++ N ++ + + G ++ L +S
Sbjct: 599 RITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNS 644
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 209/470 (44%), Gaps = 67/470 (14%)
Query: 26 HGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFC---- 81
G +P+ FN ++ C G A K++ KM P + YN LIG C
Sbjct: 325 EGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM---PGYVVYNILIGSICGDKD 381
Query: 82 --KMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMN 139
L +AEK +EM+ +V N ++ A E+AF + EM+ +G + +
Sbjct: 382 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 441
Query: 140 SVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHS 199
+ Y+ V+++L ME LL M + D +TY+I+ C+ G + +A K+ +
Sbjct: 442 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 501
Query: 200 KILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEG 259
++ E + ++ LI+ ++ +S A +L +M G +P+IVT+ +LIDGHCK G
Sbjct: 502 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 561
Query: 260 NVENAVQVYEKMMKS----------------GEKPNLVLYNSVINGLCK----EEXXXXX 299
VE A Q++E+M S E+PN+V Y ++++G CK EE
Sbjct: 562 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 621
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF- 358
N I Y+ LI+G C GK+DEA M G A TY++LI+
Sbjct: 622 DAMSMEGCEPN---QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 678
Query: 359 ----------------------------------LCKLGHIQQAKELMKVMILQGFVPDY 384
LCK+G +A +LM++M +G P+
Sbjct: 679 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 738
Query: 385 ITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
+TYT +I F E ++L + M KGV P+ TY+ ++ + G
Sbjct: 739 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 788
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 192/425 (45%), Gaps = 16/425 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
+I+A K K+ A +F L G PN+VT++ +ID CK G ++ A ++ +M
Sbjct: 516 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 575
Query: 59 --EVMSV---------YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRT 107
+V V S RP+ +TY L+ GFCK ++ A KL + M + PN
Sbjct: 576 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 635
Query: 108 YATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMV 167
Y LIDG + L+EA + EM + G Y+++I + + S ++S M+
Sbjct: 636 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 695
Query: 168 DNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLS 227
+N P+ Y+ + GLC+ G +EA+K + E + ++ +I+ +
Sbjct: 696 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 755
Query: 228 GAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI 287
+LL M +G+ P+ VT+ LID CK G ++ A + E+M ++ + Y VI
Sbjct: 756 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 815
Query: 288 NGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAF--SFAMKNAGI 345
G KE F + Y LI+ + +++ A A +A +
Sbjct: 816 EGFNKEFIESLGLLDEIGQDDTAPF-LSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 874
Query: 346 AANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIK 405
+TYN+LI LC ++ A +L M +G +P+ ++ LI + E +
Sbjct: 875 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 934
Query: 406 LHDYM 410
L D++
Sbjct: 935 LLDFI 939
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 199/450 (44%), Gaps = 24/450 (5%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+++ + CK + +A F + G PNVVT+ +I K + A ++ E
Sbjct: 481 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL---FET 537
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMM-EKDIV---------------PN 104
M P+ +TY+ LI G CK G++ A ++ M KD+ PN
Sbjct: 538 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 597
Query: 105 VRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLIS 164
V TY L+DG+ ++ +EEA +L D M +G N ++Y+ +I L G ++ + +
Sbjct: 598 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 657
Query: 165 SMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSN 224
M ++ P +TYS L + + A K SK+LEN+ + + +I+ LC+
Sbjct: 658 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 717
Query: 225 NLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYN 284
A +L+ M +G P++VT+ ++IDG G +E +++ E+M G PN V Y
Sbjct: 718 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 777
Query: 285 SVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNA 343
+I+ CK + Y +I G+ + + E+ +
Sbjct: 778 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQD 835
Query: 344 GIAANHATYNTLINFLCKLGHIQQAKELMK-VMILQGFVPDYI-TYTILITSFSKKCSPE 401
A + Y LI+ L K ++ A L++ V + DY TY LI S E
Sbjct: 836 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 895
Query: 402 EVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
+L M KGVIP Q++ +++ L +
Sbjct: 896 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 925
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 187/484 (38%), Gaps = 99/484 (20%)
Query: 43 CKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIV 102
CK+G AL +V + PD++ Y LI G C+ A N M +
Sbjct: 240 CKVGKWREALTLVETENFV------PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 293
Query: 103 PNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLL 162
PNV TY+TL+ G + L R+ + MM +G + I+N+++H GD L
Sbjct: 294 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 353
Query: 163 ISSMVDNRIPPDKFTYSIL----------------------------------------- 181
+ MV P Y+IL
Sbjct: 354 LKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 413
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
T+ LC G +AF +++ I D +++ ++NYLC ++ + A L M GL
Sbjct: 414 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 473
Query: 242 VPDIVTFGSLIDGHCKEGNVENAV-----------------------------------Q 266
V D+ T+ ++D CK G +E A +
Sbjct: 474 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 533
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKE----------EXXXXXXXXXXXXXXMNLFD--- 313
++E M+ G PN+V Y+++I+G CK E +D
Sbjct: 534 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 593
Query: 314 ----VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
V+TY L++G+C S +++EA AM G N Y+ LI+ LCK+G + +A+
Sbjct: 594 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 653
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
E+ M GF TY+ LI + K + K+ M+ P+ Y ++ L
Sbjct: 654 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 713
Query: 430 LQEG 433
+ G
Sbjct: 714 CKVG 717
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 173/427 (40%), Gaps = 42/427 (9%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
N+++ C+ G+ +AL+ + +++ + RP TYNCLI F K +L A +
Sbjct: 162 LNVLVRKHCRNGSFSIALEELGRLKD---FRFRPSRSTYNCLIQAFLKADRLDSASLIHR 218
Query: 95 EMM--------------------------------EKDIVPNVRTYATLIDGYSRARSLE 122
EM ++ VP+ Y LI G A E
Sbjct: 219 EMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFE 278
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
EA + M + N V Y+T++ + + +++ M+ P ++ L
Sbjct: 279 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 338
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNN------LSGAKQLLASM 236
C +G+ + A+K K+++ + +NILI +C + L A++ + M
Sbjct: 339 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 398
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXX 296
G+V + + S C G E A V +M+ G P+ Y+ V+N LC
Sbjct: 399 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 458
Query: 297 XXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTL 355
L DV TY +++ +C +G I++A + M+ G N TY L
Sbjct: 459 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 518
Query: 356 INFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
I+ K + A EL + M+ +G +P+ +TY+ LI K E+ ++ + M
Sbjct: 519 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 578
Query: 416 IPHKQTY 422
+P Y
Sbjct: 579 VPDVDMY 585
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 157/365 (43%), Gaps = 10/365 (2%)
Query: 74 NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK 133
N L+ C+ G ++A + + + P+ TY LI + +A L+ A + EM
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222
Query: 134 KGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNE 193
L M+ + L G L+ + PD Y+ L GLC E
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEE 279
Query: 194 AFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLID 253
A F +++ + + + +++ L+ L K++L M + G P F SL+
Sbjct: 280 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 339
Query: 254 GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN--- 310
+C G+ A ++ +KM+K G P V+YN +I +C ++ +
Sbjct: 340 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 399
Query: 311 ----LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
+ + I ++ C++GK ++AF+ M G + +TY+ ++N+LC ++
Sbjct: 400 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 459
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
A L + M G V D TYTI++ SF K E+ K + M G P+ TY A++
Sbjct: 460 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519
Query: 427 SPLLQ 431
L+
Sbjct: 520 HAYLK 524
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 206/417 (49%), Gaps = 5/417 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I +CKE + A +F G+ P+ VT+N +ID K+G +D V E
Sbjct: 134 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD---DTVCFFEE 190
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M PD ITYN LI FCK GKL + + EM + PNV +Y+TL+D + +
Sbjct: 191 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+++A + +M + GLV N Y ++I G++ L + M+ + + TY+
Sbjct: 251 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 310
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GLC + EA + K+ +I + S+N LI+ ++ N+ A +LL + RG
Sbjct: 311 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 370
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ PD++ +G+ I G C +E A V +M + G K N ++Y ++++ K
Sbjct: 371 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 430
Query: 301 XXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNA-GIAANHATYNTLINF 358
+++ V+T+ LI+G C + + +A + + N G+ AN A + +I+
Sbjct: 431 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 490
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
LCK ++ A L + M+ +G VPD YT L+ K+ + E + L D M G+
Sbjct: 491 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 547
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 185/382 (48%), Gaps = 4/382 (1%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
P F+ + V +G ++ A++ SKM+ V+ P + + N L+ F K+GK
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVF---PKTRSCNGLLHRFAKLGKTDDV 114
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
++ +M+ P V TY +ID + +E A L +EM +GLV ++V YN++I
Sbjct: 115 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 174
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
G ++ M D PD TY+ L C+ G + +F+ ++ N L +
Sbjct: 175 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
S++ L++ C+ + A + M GLVP+ T+ SLID +CK GN+ +A ++
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294
Query: 270 KMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSG 328
+M++ G + N+V Y ++I+GLC E + ++ +YN LI+G+ +
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354
Query: 329 KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYT 388
+D A +K GI + Y T I LC L I+ AK +M M G + + YT
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 414
Query: 389 ILITSFSKKCSPEEVIKLHDYM 410
L+ ++ K +P E + L D M
Sbjct: 415 TLMDAYFKSGNPTEGLHLLDEM 436
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 153/290 (52%), Gaps = 6/290 (2%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I A CK L +A + L+ G+ NVVT+ +ID C M A ++ KM+
Sbjct: 276 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 335
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
V P+ +YN LI GF K + A +L NE+ + I P++ Y T I G +E
Sbjct: 336 VI---PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 392
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGD-MEGVSLLISSMVDNRIPPDKFTYSIL 181
A + +EM + G+ NS+IY T++ + G+ EG+ LL M + I T+ +L
Sbjct: 393 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL-DEMKELDIEVTVVTFCVL 451
Query: 182 TKGLCRNGNVNEAFKFHSKILEN-NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
GLC+N V++A + ++I + L +A +I+ LC+ N + A L M +G
Sbjct: 452 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 511
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
LVPD + SL+DG+ K+GNV A+ + +KM + G K +L+ Y S++ GL
Sbjct: 512 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 561
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 137/298 (45%), Gaps = 1/298 (0%)
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
LEEA + +M + + + N ++H G + V M+ P FTY+I
Sbjct: 76 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 135
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ +C+ G+V A ++ L+ D ++N +I+ + L M
Sbjct: 136 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 195
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
PD++T+ +LI+ CK G + ++ Y +M +G KPN+V Y+++++ CKE
Sbjct: 196 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 255
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ L + TY +LI+ C G + +AF M G+ N TY LI+ L
Sbjct: 256 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 315
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
C +++A+EL M G +P+ +Y LI F K + + ++L + + +G+ P
Sbjct: 316 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 373
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 137/314 (43%), Gaps = 44/314 (14%)
Query: 1 NVVIY-----ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
NVV Y LC ++ EA +F + G+ PN+ ++N +I K MD AL+++
Sbjct: 304 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 363
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
++++ I+PD + Y I G C + K+ A+ + NEM E I N Y TL+D Y
Sbjct: 364 NELKGRG---IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 420
Query: 116 SRARSLEEAFRLCDEMMKK------------------------------------GLVMN 139
++ + E L DEM + GL N
Sbjct: 421 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 480
Query: 140 SVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHS 199
+ I+ +I L + +E + L MV + PD+ Y+ L G + GNV EA
Sbjct: 481 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 540
Query: 200 KILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEG 259
K+ E + D ++ L+ L N L A+ L M G+ PD V S++ H + G
Sbjct: 541 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELG 600
Query: 260 NVENAVQVYEKMMK 273
++ AV++ +MK
Sbjct: 601 CIDEAVELQSYLMK 614
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 105/215 (48%), Gaps = 3/215 (1%)
Query: 32 VVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEK 91
VVTF ++ID CK + A+ ++ + + + ++ ++ + +I G CK ++ A
Sbjct: 445 VVTFCVLIDGLCKNKLVSKAVDYFNR--ISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 502
Query: 92 LKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLY 151
L +M++K +VP+ Y +L+DG + ++ EA L D+M + G+ ++ + Y +++ L
Sbjct: 503 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLS 562
Query: 152 VEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAF 211
++ + M+ I PD+ + K G ++EA + S ++++ L+ +
Sbjct: 563 HCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLT-SD 621
Query: 212 SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
+ N L N N +S + + L P ++
Sbjct: 622 NDNALPNIYSDQNLVSSREHEEQETRISNLQPKLL 656
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 213/429 (49%), Gaps = 6/429 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ +I K K EA+ +F S + G+ NV N I+ CK G D A +++SKME
Sbjct: 413 HTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMES 471
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
I P+ ++YN ++ G C+ + +A + + ++EK + PN TY+ LIDG R
Sbjct: 472 ---RGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDN-RIPPDKFTYS 179
+ A + + M + +N V+Y T+I+ L G L+++M++ R+ +Y+
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ G + G ++ A + ++ N + + ++ L+N LC++N + A ++ M +
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+ DI +G+LIDG CK N+E+A ++ ++++ G P+ +YNS+I+G
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 300 XXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
L D+ TY TLI+G G + A M+ G+ + Y ++N
Sbjct: 709 LDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNG 768
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
L K G + ++ + M P+ + Y +I ++ + +E +LHD M+ KG++P
Sbjct: 769 LSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPD 828
Query: 419 KQTYKAVVS 427
T+ +VS
Sbjct: 829 GATFDILVS 837
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 224/468 (47%), Gaps = 41/468 (8%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I CK L+ A+ +F + K G PN VTF+++I+ K G M+ AL+ KMEV+
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL- 403
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
+ P + +I G+ K K A KL +E E + NV T++ + +
Sbjct: 404 --GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTD 460
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
EA L +M +G+ N V YN V+ + +M+ ++ S++++ + P+ +TYSIL
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILI 520
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY-VRGL 241
G RN + A + + + +N+ + + +IN LC+ S A++LLA+M + L
Sbjct: 521 DGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL 580
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
+++ S+IDG KEG +++AV YE+M +G PN++ Y S++NGLCK
Sbjct: 581 CVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALE 640
Query: 302 XXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFA-FSFAMKNA---------------- 343
+ D+ Y LI+G+C ++ A A FS ++
Sbjct: 641 MRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFR 700
Query: 344 ------------------GIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
G+ + TY TLI+ L K G++ A EL M G VPD I
Sbjct: 701 NLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEI 760
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
YT+++ SKK +V+K+ + M V P+ Y AV++ +EG
Sbjct: 761 IYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 210/463 (45%), Gaps = 40/463 (8%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+++ A +E K EA+ V R+++ G P+ + +++ + CK +DLA+ E+
Sbjct: 238 LLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCK--TLDLAMANSLLREMK 295
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
P TY +I K G + A +LK+EM+ I NV +LI G+ + L
Sbjct: 296 EKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDL 355
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
A L D+M K+G NSV ++ +I W G+ME M + P F +
Sbjct: 356 VSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI 415
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
+G + EA K + E L + F N ++++LC+ A +LL+ M RG+
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKP----------------------- 278
P++V++ +++ GHC++ N++ A V+ +++ G KP
Sbjct: 475 GPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE 534
Query: 279 ------------NLVLYNSVINGLCK--EEXXXXXXXXXXXXXXMNLFDVITYNTLINGY 324
N V+Y ++INGLCK + ++YN++I+G+
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
G++D A A M GI+ N TY +L+N LCK + QA E+ M +G D
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654
Query: 385 ITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
Y LI F K+ + E L ++ +G+ P + Y +++S
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLIS 697
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 152/289 (52%), Gaps = 4/289 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHG-IWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+I LCK + +A + ++ + + +++N IID K G MD A V+ E
Sbjct: 553 TIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA---VAAYEE 609
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M I P+ ITY L+ G CK ++ A ++++EM K + ++ Y LIDG+ + +
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+E A L E++++GL + IYN++I G+M L M+ + + D TY+
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GL ++GN+ A + ++++ L+ D + +++N L + ++ M
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING 289
+ P+++ + ++I GH +EGN++ A +++++M+ G P+ ++ +++G
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 185/408 (45%), Gaps = 4/408 (0%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
G N FN +++ K D A+ +V++M + V P N + + L
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFP---YVNRTLSALVQRNSL 214
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
T A++L + M+ + + T L+ R EA + +++G +S++Y+
Sbjct: 215 TEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLA 274
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRI-PPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
+ D+ + L+ M + ++ P + TY+ + + GN+++A + ++L +
Sbjct: 275 VQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG 334
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
+ + + LI C++N+L A L M G P+ VTF LI+ K G +E A+
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL 394
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYC 325
+ Y+KM G P++ +++I G K + L +V NT+++ C
Sbjct: 395 EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLC 454
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
GK DEA M++ GI N +YN ++ C+ ++ A+ + ++ +G P+
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
TY+ILI + + +++ ++M + + Y+ +++ L + G
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+I CK + A ++F L+ G+ P+ +N +I +G M AL + KM
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM--- 715
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
+R D TY LI G K G L +A +L EM +VP+ Y +++G S+
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+ ++ +EM K + N +IYN VI Y EG+++ L M+D I PD T+ IL
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Query: 182 TKGLCRN 188
G N
Sbjct: 836 VSGQVGN 842
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 10/280 (3%)
Query: 146 VIHWLYVEGDMEGVSLLISSMVDN------RIPPDKFTYSILTKGLCRNGNVNEAFKFHS 199
+I ++ S+L+S +VD+ + F Y L ++ + A +
Sbjct: 130 LIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNY--LLNAYSKDRQTDHAVDIVN 187
Query: 200 KILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEG 259
++LE ++I N ++ L + N+L+ AK+L + M G+ D VT L+ +E
Sbjct: 188 QMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREE 247
Query: 260 NVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK--EEXXXXXXXXXXXXXXMNLFDVITY 317
A++V + ++ G +P+ +LY+ + CK + + + TY
Sbjct: 248 KPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETY 307
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
++I G +D+A M + GI+ N +LI CK + A L M
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK 367
Query: 378 QGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
+G P+ +T+++LI F K E+ ++ + M + G+ P
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTP 407
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 204/434 (47%), Gaps = 4/434 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++++ L + ++ +A V K G PNV+ +N +ID + G+++ A+++ ++
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI---KDL 390
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M + S TYN LI G+CK G+ AE+L EM+ N ++ ++I
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ A R EM+ + + + T+I L G L ++ D T +
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GLC G ++EAF+ +IL + D S+N LI+ C L A L M RG
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L PD T+ LI G VE A+Q ++ ++G P++ Y+ +I+G CK E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
N+ + + YN LI YC SG++ A MK+ GI+ N ATY +LI +
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
+ +++AK L + M ++G P+ YT LI + K +V L M K V P+K
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 420 QTYKAVVSPLLQEG 433
TY ++ ++G
Sbjct: 751 ITYTVMIGGYARDG 764
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 193/408 (47%), Gaps = 4/408 (0%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
G+ P+V F I+ CK G ++ A+K+ SKME V P+ +T+N +I G G+
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA---PNVVTFNTVIDGLGMCGRY 311
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
A K +M+E+ + P + TY+ L+ G +RA+ + +A+ + EM KKG N ++YN +
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
I G + + MV + TY+ L KG C+NG + A + ++L
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
+ S +I LC A + + M +R + P +LI G CK G A++
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN-LFDVITYNTLINGYC 325
++ + + G + N++++GLC+ + D ++YNTLI+G C
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
K+DEAF F M G+ ++ TY+ LI L + +++A + G +PD
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
TY+++I K EE + D M+ K V P+ Y ++ + G
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 199/433 (45%), Gaps = 37/433 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I CK + A + L G N +F +I + C D AL+ V +M
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM-- 461
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ ++ P LI G CK GK + A +L + + K V + RT L+ G A
Sbjct: 462 -LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L+EAFR+ E++ +G VM+ V YNT+I + ++ + + MV + PD +TYSI
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GL V EA +F N ++ D ++++++I+ C++ ++ M +
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ P+ V + LI +C+ G + A+++ E M G PN Y S+I G+
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM---------- 690
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
+I+ +++EA M+ G+ N Y LI+
Sbjct: 691 ------------SIIS------------RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
KLG + + + L++ M + P+ ITYT++I +++ + E +L + M KG++P
Sbjct: 727 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSI 786
Query: 421 TYKAVVSPLLQEG 433
TYK + L++G
Sbjct: 787 TYKEFIYGYLKQG 799
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
++ EA +F G+ PNV + +ID K+G M +KV + M ++ P+ I
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM---VKVECLLREMHSKNVHPNKI 751
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDE 130
TY +IGG+ + G +T A +L NEM EK IVP+ TY I GY + + EAF+ DE
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025) |
chr4:10868400-10870382 REVERSE
Length = 660
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 192/401 (47%), Gaps = 7/401 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+VI ALCK + A+ VF + P+ T+ ++D CK +D A+ ++ +M+
Sbjct: 191 NLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ- 249
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
P + YN LI G CK G LT KL + M K VPN TY TLI G
Sbjct: 250 --SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L++A L + M+ + N V Y T+I+ L + L+SSM + ++ YS+
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GL + G EA K+ E + +++L++ LCR + AK++L M G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+P+ T+ SL+ G K G E AVQV+++M K+G N Y+ +I+GLC
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 301 XXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAM---KNAGIAANHATYNTLI 356
+ + D + Y+++I G C G +D A M + + TYN L+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK 397
+ LC I +A +L+ M+ +G PD IT + + S+K
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEK 588
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 184/397 (46%), Gaps = 13/397 (3%)
Query: 28 IWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLT 87
I PN ++FN++I CK+ +D A++V M PD TY L+ G CK ++
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCL---PDGYTYCTLMDGLCKEERID 239
Query: 88 MAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVI 147
A L +EM + P+ Y LIDG + L +L D M KG V N V YNT+I
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 148 HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI 207
H L ++G ++ L+ MV ++ P+ TY L GL + +A + S + E
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 208 EDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQV 267
+ +++LI+ L + A L M +G P+IV + L+DG C+EG A ++
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 268 YEKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVITYNTLING 323
+M+ SG PN Y+S++ G K EE N F Y+ LI+G
Sbjct: 420 LNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF---CYSVLIDG 476
Query: 324 YCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ---GF 380
C G++ EA M GI + Y+++I LC +G + A +L M+ Q
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 381 VPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
PD +TY IL+ + + L + M+ +G P
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP 573
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 195/423 (46%), Gaps = 31/423 (7%)
Query: 6 ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYS 65
LCKE ++ EA+ + G P+ V +N++ID CK G + K+V M +
Sbjct: 231 GLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV- 289
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
P+ +TYN LI G C GKL A L M+ +PN TY TLI+G + R +A
Sbjct: 290 --PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
RL M ++G +N IY+ +I L+ EG E L M + P+ YS+L GL
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
CR G NEA + ++++ + + +A++++ L+ ++ A Q+ M G +
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXX 301
+ LIDG C G V+ A+ V+ KM+ G KP+ V Y+S+I GLC +
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Query: 302 XXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL-- 359
+ DV+TYN L++G C I A +M + G + T NT +N L
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Query: 360 ----CKLG---------------HIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSP 400
C G + A +++VM+ + P T+ +++ C P
Sbjct: 588 KSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREI---CKP 644
Query: 401 EEV 403
+++
Sbjct: 645 KKI 647
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 182/350 (52%), Gaps = 1/350 (0%)
Query: 65 SIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEA 124
+I P+ +++N +I CK+ + A ++ M E+ +P+ TY TL+DG + ++EA
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 125 FRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKG 184
L DEM +G + VIYN +I L +GD+ V+ L+ +M P++ TY+ L G
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 185 LCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD 244
LC G +++A +++ + I + ++ LIN L + + A +LL+SM RG +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 245 IVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXX 304
+ LI G KEG E A+ ++ KM + G KPN+V+Y+ +++GLC+E
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 305 XXXXMN-LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLG 363
L + TY++L+ G+ +G +EA M G + N Y+ LI+ LC +G
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 364 HIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLK 413
+++A + M+ G PD + Y+ +I S + +KL+ M+ +
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 176/370 (47%), Gaps = 8/370 (2%)
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF----RL 127
T + +I + G EKL + + ++ V R++ + Y +A ++A R+
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 128 CDEMMKKGLV--MNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
DE K V NSV+ + LY G +E +++S ++ I P+ +++++ K L
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRG-LEFYDYVVNSNMNMNISPNGLSFNLVIKAL 197
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
C+ V+ A + + E + D +++ L++ LC+ + A LL M G P
Sbjct: 198 CKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSP 257
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC-KEEXXXXXXXXXX 304
V + LIDG CK+G++ ++ + M G PN V YN++I+GLC K +
Sbjct: 258 VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 317
Query: 305 XXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGH 364
+ + +TY TLING + +A +M+ G N Y+ LI+ L K G
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Query: 365 IQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKA 424
++A L + M +G P+ + Y++L+ ++ P E ++ + M+ G +P+ TY +
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 425 VVSPLLQEGV 434
++ + G+
Sbjct: 438 LMKGFFKTGL 447
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 146/300 (48%), Gaps = 9/300 (3%)
Query: 139 NSVIYNTVIHWL----YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
N + +N VI L +V+ +E + M + + PD +TY L GLC+ ++EA
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIE----VFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
++ +N+LI+ LC+ +L+ +L+ +M+++G VP+ VT+ +LI G
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FD 313
C +G ++ AV + E+M+ S PN V Y ++INGL K+ +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 314 VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
Y+ LI+G GK +EA + M G N Y+ L++ LC+ G +AKE++
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 374 VMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
MI G +P+ TY+ L+ F K EE +++ M G +K Y ++ L G
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 22/296 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+V+I L KE K EAMS++ + + G PN+V +++++D C+ G + A +++++M
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
P++ TY+ L+ GF K G A ++ EM + N Y+ LIDG
Sbjct: 426 SGCL---PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIP---PDKFT 177
++EA + +M+ G+ ++V Y+++I L G M+ L M+ P PD T
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLC-RSNNLSGAKQLLASM 236
Y+IL GLC +++ A + +L+ D + N +N L +SN+ + L +
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL 602
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
VR L K V A + E M+ P + ++ +CK
Sbjct: 603 VVRLL---------------KRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICK 643
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+V+I LC ++ EAM V+ + L GI P+ V ++ II C +G+MD ALK+ +M
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+PD +TYN L+ G C ++ A L N M+++ P+V T T ++ +
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN------T 584
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L E CD KG S + V+ L + + G ++ M+ + P T+++
Sbjct: 585 LSEKSNSCD----KG---RSFLEELVVRLLKRQ-RVSGACTIVEVMLGKYLAPKTSTWAM 636
Query: 181 LTKGLCRNGNVNEA 194
+ + +C+ +N A
Sbjct: 637 IVREICKPKKINAA 650
>AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23451144-23452201 FORWARD
Length = 323
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 165/311 (53%), Gaps = 8/311 (2%)
Query: 96 MMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGD 155
M+E P+V T+ TL++G + +A L D M+++G Y T+I+ L GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGD 56
Query: 156 MEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI 215
E L+S M + I Y+ + LC++G+ A +++ + + D +++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 216 LINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
+I+ CRS + A+QLL M R + PD+VTF +LI+ KEG V A ++Y M++ G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 276 EKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAF 334
P + YNS+I+G CK++ + DV+T++TLINGYC + ++D
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 335 AFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
M GI AN TY TLI+ C++G + A++L+ VMI G P+YIT+ ++ S
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 395 SKKCSPEEVIK 405
CS +E+ K
Sbjct: 297 ---CSKKELRK 304
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 153/303 (50%), Gaps = 5/303 (1%)
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
RPD +T+ L+ G C G++ A L + M+E+ P Y T+I+G + E A
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLC 186
L +M + + + VIYN +I L +G L + M D I PD TYS + C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
R+G +A + ++E + D + + LIN L + +S A+++ M RG+ P +
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXX 306
T+ S+IDG CK+ + +A ++ + M P++V ++++ING CK +
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 307 XXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
+ + +TY TLI+G+C G +D A M ++G+A N+ T+ +++ LC +
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 366 QQA 368
++A
Sbjct: 303 RKA 305
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 150/300 (50%), Gaps = 5/300 (1%)
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGN 190
M++ G + V + T+++ L EG + L+ MV+ P Y + GLC+ G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 191 VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGS 250
A SK+ E ++ +N +I+ LC+ + A+ L M+ +G+ PD++T+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 251 LIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN 310
+ID C+ G +A Q+ M++ P++V ++++IN L KE
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 311 LF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
+F ITYN++I+G+C ++++A +M + + + T++TLIN CK +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
E+ M +G V + +TYT LI F + + L + M+ GV P+ T++++++ L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 138/273 (50%), Gaps = 3/273 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+I LCK A+++ + + I +VV +N IID CK G A + ++M
Sbjct: 46 TIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK 105
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
++ PD ITY+ +I FC+ G+ T AE+L +M+E+ I P+V T++ LI+ + +
Sbjct: 106 GIF---PDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKV 162
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
EA + +M+++G+ ++ YN++I + + ++ SM PD T+S L
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
G C+ V+ + ++ ++ + ++ LI+ C+ +L A+ LL M G+
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
P+ +TF S++ C + + A + E + KS
Sbjct: 283 APNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 113/227 (49%), Gaps = 32/227 (14%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
N +I LCK+ + A ++F GI+P+V+T++ +ID C+ G A +++ M
Sbjct: 80 NAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139
Query: 59 ------------------------EVMSVY------SIRPDSITYNCLIGGFCKMGKLTM 88
E +Y I P +ITYN +I GFCK +L
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLND 199
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A+++ + M K P+V T++TLI+GY +A+ ++ + EM ++G+V N+V Y T+IH
Sbjct: 200 AKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 259
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
GD++ L++ M+ + + P+ T+ + LC + +AF
Sbjct: 260 GFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF 306
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 38/198 (19%)
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
M G PD+VTF +L++G C EG V A+ + ++M++ G +P
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----------------- 43
Query: 296 XXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTL 355
Y T+ING C G + A M+ I A+ YN +
Sbjct: 44 ---------------------YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAI 82
Query: 356 INFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
I+ LCK GH A+ L M +G PD ITY+ +I SF + + +L M+ + +
Sbjct: 83 IDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142
Query: 416 IPHKQTYKAVVSPLLQEG 433
P T+ A+++ L++EG
Sbjct: 143 NPDVVTFSALINALVKEG 160
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 212/435 (48%), Gaps = 5/435 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
V++ L K L EA F L+ PNVVT+ ++D CK G + A ++++M
Sbjct: 333 TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 392
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
SV P+ +TY+ +I G+ K G L A L +M ++++VPN TY T+IDG +A
Sbjct: 393 KSVI---PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK 449
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
E A L EM G+ N+ I + +++ L G ++ V L+ MV + D+ Y+
Sbjct: 450 EEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTS 509
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + G+ A + ++ E + D S+N+LI+ + + + GA M +G
Sbjct: 510 LIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKG 568
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ PDI TF +++ K+G+ E +++++KM G KP+L+ N V+ LC+
Sbjct: 569 IEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAI 628
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
M + ++ TY ++ + D F + + GI + YNTLI L
Sbjct: 629 HILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
CKLG ++A +M M +GF+PD +T+ L+ + + + + M+ G+ P+
Sbjct: 689 CKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNV 748
Query: 420 QTYKAVVSPLLQEGV 434
TY ++ L G+
Sbjct: 749 ATYNTIIRGLSDAGL 763
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 210/416 (50%), Gaps = 14/416 (3%)
Query: 19 VFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIG 78
++ + + G+ P+V N++I CK+G + A+ ++ + V+S+ D++TYN +I
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL-RNRVISI-----DTVTYNTVIS 169
Query: 79 GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVM 138
G C+ G A + +EM++ I+P+ +Y TLIDG+ + + A L DE+ + L+
Sbjct: 170 GLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLIT 229
Query: 139 NSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFH 198
++++ ++ ++ + MV + PD T+S + LC+ G V E
Sbjct: 230 HTILLSSYY-------NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLL 282
Query: 199 SKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
++ E ++ + ++ L++ L ++N A L + M VRG+ D+V + L+DG K
Sbjct: 283 REMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKA 342
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITY 317
G++ A + ++ +++ + PN+V Y ++++GLCK ++ +V+TY
Sbjct: 343 GDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
+++INGY G ++EA + M++ + N TY T+I+ L K G + A EL K M L
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL 462
Query: 378 QGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
G + L+ + +EV L MV KGV + Y +++ + G
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 217/459 (47%), Gaps = 27/459 (5%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLA--------- 51
N VI LC+ EA +K GI P+ V++N +ID CK+G A
Sbjct: 165 NTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE 224
Query: 52 LKVVSKMEVMSVY----------------SIRPDSITYNCLIGGFCKMGKLTMAEKLKNE 95
L +++ ++S Y PD +T++ +I CK GK+ L E
Sbjct: 225 LNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLRE 284
Query: 96 MMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGD 155
M E + PN TY TL+D +A A L +M+ +G+ ++ V+Y ++ L+ GD
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
Query: 156 MEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI 215
+ ++++ P+ TY+ L GLC+ G+++ A +++LE ++I + +++
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 216 LINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
+IN + L A LL M + +VP+ T+G++IDG K G E A+++ ++M G
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
Query: 276 EKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAF 334
+ N + ++++N L + + D I Y +LI+ + G + A
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAAL 524
Query: 335 AFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
A++ M+ G+ + +YN LI+ + K G + A K M +G PD T+ I++ S
Sbjct: 525 AWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQ 583
Query: 395 SKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
K+ E ++KL D M G+ P + VV L + G
Sbjct: 584 RKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENG 622
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 187/423 (44%), Gaps = 18/423 (4%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
G+ + + + +IDV K G + AL +M+ + D ++YN LI G K GK+
Sbjct: 499 GVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG---MPWDVVSYNVLISGMLKFGKV 555
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
A+ M EK I P++ T+ +++ + E +L D+M G+ + + N V
Sbjct: 556 G-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIV 614
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
+ L G ME +++ M+ I P+ TY I ++ + FK H +L +
Sbjct: 615 VGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGI 674
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
+N LI LC+ A ++ M RG +PD VTF SL+ G+ +V A+
Sbjct: 675 KLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALS 734
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYC 325
Y MM++G PN+ YN++I GL + D TYN LI+G
Sbjct: 735 TYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQA 794
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
G + + M G+ +TYN LI+ +G + QA+EL+K M +G P+
Sbjct: 795 KIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTS 854
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVL-------------KGVIPHKQTYKAVVSPLLQE 432
TY +I+ K C+ +V M L KG IP QT + + +
Sbjct: 855 TYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKP 914
Query: 433 GVE 435
G++
Sbjct: 915 GMK 917
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 198/422 (46%), Gaps = 56/422 (13%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKH-GIWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
NV+I + K K+ Y+ ++ GI P++ TFN++++ K G + LK+ KM+
Sbjct: 543 NVLISGMLKFGKV--GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 600
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
I+P ++ N ++G C+ GK+ A + N+MM +I PN+ TY +D S+ +
Sbjct: 601 SCG---IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK 657
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+ F+ + ++ G+ ++ +YNT+I L G + ++++ M PD T++
Sbjct: 658 RADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFN 717
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L G +V +A +S ++E + + ++N +I L + + + L+ M R
Sbjct: 718 SLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSR 777
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+ PD T+ +LI G K GN++ ++ +Y +M+ G P
Sbjct: 778 GMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPK-------------------- 817
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
TYN LI+ + N GK+ +A M G++ N +TY T+I+ L
Sbjct: 818 --------------TSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGL 863
Query: 360 CKLG------------HIQQAKELMKVMILQ-GFVPDYITYTILITSFSK---KCSPEEV 403
CKL ++ +AK L+K M+ + G++P T + +FSK K E
Sbjct: 864 CKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERF 923
Query: 404 IK 405
+K
Sbjct: 924 LK 925
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 166/361 (45%), Gaps = 35/361 (9%)
Query: 105 VRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM-EGVSLLI 163
V + TL Y L A R M G+V +S ++N++IH V G + + VSL+
Sbjct: 58 VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117
Query: 164 SSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE-DAFSHNILINYLCR 222
S M+ + PD F ++L C+ G ++ F +L N +I D ++N +I+ LC
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLS----FAISLLRNRVISIDTVTYNTVISGLCE 173
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV----------------- 265
A Q L+ M G++PD V++ +LIDG CK GN A
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTIL 233
Query: 266 -----------QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-D 313
+ Y M+ SG P++V ++S+IN LCK M+++ +
Sbjct: 234 LSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPN 293
Query: 314 VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
+TY TL++ + A A M GI + Y L++ L K G +++A++ K
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 374 VMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+++ VP+ +TYT L+ K + M+ K VIP+ TY ++++ +++G
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKG 413
Query: 434 V 434
+
Sbjct: 414 M 414
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 216/468 (46%), Gaps = 40/468 (8%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+++ +C E K+ + G PN+V +N II CK+G ++ A V ++++
Sbjct: 210 ILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLK 269
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEK---------------------- 99
P T+ +I GFCK G +++L +E+ E+
Sbjct: 270 G---FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326
Query: 100 -------------DIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
D P+V TY LI+ + E A DE KKGL+ N++ Y +
Sbjct: 327 VDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPL 386
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
I + + S L+ M + PD TY IL GL +G++++A K+++ +
Sbjct: 387 IQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV 446
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
DA +N+L++ LC++ AK L + M R ++PD + +LIDG + G+ + A +
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARK 506
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYC 325
V+ ++ G K ++V +N++I G C+ +L D TY+T+I+GY
Sbjct: 507 VFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV 566
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
+ A M+ N TY +LIN C G + A+E K M L+ VP+ +
Sbjct: 567 KQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVV 626
Query: 386 TYTILITSFSKKCSP-EEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
TYT LI S +K+ S E+ + + M+ +P++ T+ ++ +++
Sbjct: 627 TYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 207/435 (47%), Gaps = 6/435 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ L K +L +A V+ G + + +++ C G +++ K++ E
Sbjct: 174 NSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLI---EG 230
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
P+ + YN +IGG+CK+G + A + E+ K +P + T+ T+I+G+ +
Sbjct: 231 RWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGD 290
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ RL E+ ++GL ++ N +I Y G + I ++ N PD TY+I
Sbjct: 291 FVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNI 350
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L LC+ G A F + + LI + S+ LI C+S A +LL M RG
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
PDIVT+G LI G G++++AV + K++ G P+ +YN +++GLCK
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAF-AFSFAMKNAGIAANHATYNTLINF 358
N+ D Y TLI+G+ SG DEA FS +++ G+ + +N +I
Sbjct: 471 LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK-GVKVDVVHHNAMIKG 529
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
C+ G + +A M M + VPD TY+ +I + K+ IK+ YM P+
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Query: 419 KQTYKAVVSPLLQEG 433
TY ++++ +G
Sbjct: 590 VVTYTSLINGFCCQG 604
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 192/416 (46%), Gaps = 54/416 (12%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
P+V T+N++I+ CK G ++A V ++ S + P++++Y LI +CK + +A
Sbjct: 343 PDVATYNILINRLCKEGKKEVA---VGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIA 399
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
KL +M E+ P++ TY LI G + +++A + +++ +G+ ++ IYN ++
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
L G LL S M+D I PD + Y+ L G R+G+ +EA K S +E + D
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
HN +I CRS L A + M LVPD T+ ++IDG+ K+ ++ A++++
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 270 KMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYC--- 325
M K+ KPN+V Y S+ING C + +L +V+TY TLI
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 326 -----------------------------------NSGKI-----------DEAFA-FSF 338
SGK+ F+ F
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFH 699
Query: 339 AMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
MK+ G + + A YN+ + LC G ++ A M+ +GF PD +++ ++ F
Sbjct: 700 RMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 164/377 (43%), Gaps = 3/377 (0%)
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEK-DIVPNVRTYATLIDGYSRA 118
V+ +Y PD I N L+ K +L A K+ +EM ++ D V N T L+ G
Sbjct: 160 VVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYST-CILVKGMCNE 218
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
+E +L + KG + N V YNT+I GD+E L+ + P T+
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ G C+ G+ + + S++ E L + N +I+ R + + +
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIA 338
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK-EEXXX 297
PD+ T+ LI+ CKEG E AV ++ K G PN + Y +I CK +E
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 298 XXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
D++TY LI+G SG +D+A + + G++ + A YN L++
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
LCK G AK L M+ + +PD Y LI F + +E K+ V KGV
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 418 HKQTYKAVVSPLLQEGV 434
+ A++ + G+
Sbjct: 519 DVVHHNAMIKGFCRSGM 535
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 137/307 (44%), Gaps = 20/307 (6%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ LCK + L A +F L I P+ + +ID + G D A KV S
Sbjct: 454 NMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS---- 509
Query: 61 MSV-YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+SV ++ D + +N +I GFC+ G L A N M E+ +VP+ TY+T+IDGY + +
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+ A ++ M K N V Y ++I+ +GD + M + P+ TY+
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYT 629
Query: 180 ILTKGLCRNGNVNE-AFKFHSKILENNLIEDAFSHNILINYLCRSNNLS----------G 228
L + L + + E A + ++ N + + + N L+ + + G
Sbjct: 630 TLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHG 689
Query: 229 AKQLLASMYVR----GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYN 284
L + + R G + S + C G V+ A +KM+K G P+ V +
Sbjct: 690 QSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFA 749
Query: 285 SVINGLC 291
++++G C
Sbjct: 750 AILHGFC 756
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 200/442 (45%), Gaps = 33/442 (7%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSV----------- 63
+A+ +F R + P+++ F ++ V KM D+ + + +M+++ +
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 64 ---------------------YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIV 102
PD +T+ L+ G+C ++ A L ++++
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 103 PNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLL 162
PNV TY TLI + R L A L ++M G N V YN ++ L G + L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 163 ISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR 222
+ M+ RI P+ T++ L + G + EA + ++ +++ ++ D F++ LIN LC
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVL 282
L A+Q+ M G P+ V + +LI G CK VE+ ++++ +M + G N +
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 283 YNSVINGLC-KEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMK 341
Y +I G C D+ TYN L++G C +GK+++A M+
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 342 NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
+ N TY +I +CKLG ++ A +L + +G P+ ITYT +I+ F ++
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 402 EVIKLHDYMVLKGVIPHKQTYK 423
E L M G +P++ YK
Sbjct: 486 EADSLFKKMKEDGFLPNESVYK 507
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 182/380 (47%), Gaps = 37/380 (9%)
Query: 8 CKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIR 67
C ++ +A+++F + L G PNVVT+ +I CK ++ A+++ ++ M R
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ---MGTNGSR 220
Query: 68 PDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRL 127
P+ +TYN L+ G C++G+ A L +MM++ I PNV T+ LID + + L EA L
Sbjct: 221 PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280
Query: 128 CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR 187
+ M++ + + Y ++I+ L + G ++ + M N P++ Y+ L G C+
Sbjct: 281 YNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
+ V + K ++ + ++ + ++ +LI C A+++ M R PDI T
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXX 307
+ L+DG C G VE A+ ++E M K N+V Y +I G+CK
Sbjct: 401 YNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK--------------- 445
Query: 308 XMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQ 367
GK+++AF ++ + G+ N TY T+I+ C+ G I +
Sbjct: 446 -------------------LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE 486
Query: 368 AKELMKVMILQGFVPDYITY 387
A L K M GF+P+ Y
Sbjct: 487 ADSLFKKMKEDGFLPNESVY 506
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 148/283 (52%), Gaps = 3/283 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ LC+ + +A + +K I PNV+TF +ID K+G + A ++ + M
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
MSVY PD TY LI G C G L A ++ M PN Y TLI G+ +++
Sbjct: 287 MSVY---PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+E+ ++ EM +KG+V N++ Y +I + G + + + M R PPD TY++
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L GLC NG V +A + + + + ++ I+I +C+ + A L S++ +G
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLY 283
+ P+++T+ ++I G C+ G + A +++KM + G PN +Y
Sbjct: 464 MKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 152/298 (51%), Gaps = 8/298 (2%)
Query: 1 NVVIYA-----LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
NVV Y LCK L A+ +F + +G PNVVT+N ++ C++G A ++
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
M I P+ IT+ LI F K+GKL A++L N M++ + P+V TY +LI+G
Sbjct: 247 RDM---MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
L+EA ++ M + G N VIY T+IH +E + M + +
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
TY++L +G C G + A + +++ D ++N+L++ LC + + A +
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
M R + +IVT+ +I G CK G VE+A ++ + G KPN++ Y ++I+G C+
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 2/256 (0%)
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
IL GL N N+A ++++ + + L++ + + N L M +
Sbjct: 54 ILRNGL-HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+ P + T ++ C A KMMK G +P+LV + S++NG C
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 300 XXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
M +V+TY TLI C + ++ A M G N TYN L+
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
LC++G A L++ M+ + P+ IT+T LI +F K E +L++ M+ V P
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 419 KQTYKAVVSPLLQEGV 434
TY ++++ L G+
Sbjct: 293 VFTYGSLINGLCMYGL 308
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 208/481 (43%), Gaps = 74/481 (15%)
Query: 24 LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
L G PNVVTF +I+ CK G MD A + +VM I PD I Y+ LI G+ K
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDL---FKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 84 GKLTMAEKLKNEMMEK----DIV-------------------------------PNVRTY 108
G L M KL ++ + K D+V PNV TY
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 109 ATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVD 168
LI G + + EAF + +++K+G+ + V Y+++I G++ L M+
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 169 NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSG 228
PPD Y +L GL + G + A +F K+L ++ + N LI+ CR N
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 229 AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN 288
A ++ M + G+ PD+ TF +++ EG +E A+ ++ +M K G +P+ + Y ++I+
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 289 GLCKE-------------EXXXXXXXXXXXXXXMNLF----------------------- 312
CK + ++L
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
D++TYNT+I GYC+ ++DEA +K N T LI+ LCK + A +
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
+M +G P+ +TY L+ FSK E KL + M KG+ P +Y ++ L +
Sbjct: 695 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 433 G 433
G
Sbjct: 755 G 755
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 198/426 (46%), Gaps = 4/426 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++I LC++ ++ EA ++ + LK G+ P++VT++ +ID CK G + + M
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M PD + Y L+ G K G + A + +M+ + I NV + +LIDG+ R
Sbjct: 455 MGY---PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+EA ++ M G+ + + TV+ +EG +E L M + PD Y
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L C++ + + N + D N++I+ L + + + A + ++
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE-EXXXXX 299
+ PDIVT+ ++I G+C ++ A +++E + + PN V +I+ LCK +
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ + +TY L++ + S I+ +F M+ GI+ + +Y+ +I+ L
Sbjct: 692 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
CK G + +A + I +PD + Y ILI + K E L+++M+ GV P
Sbjct: 752 CKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Query: 420 QTYKAV 425
+A+
Sbjct: 812 LLQRAL 817
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 195/425 (45%), Gaps = 53/425 (12%)
Query: 1 NVVIYA-----LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
+VVIY L K+ +L AM + L I NVV FN +ID C++ D ALKV
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV- 518
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
+M +Y I+PD T+ ++ G+L A L M + + P+ Y TLID +
Sbjct: 519 --FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
+ +L D M + + + + N VIH L+ +E S +++++ ++ PD
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
TY+ + G C ++EA + + + + ILI+ LC++N++ GA ++ +
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 696
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
M +G P+ VT+G L+D K ++E + +++E+M + G P++V
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV-------------- 742
Query: 296 XXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTL 355
+Y+ +I+G C G++DEA +A + + Y L
Sbjct: 743 --------------------SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 782
Query: 356 INFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
I CK+G + +A L + M+ G PD +L + S+ P+ +++ KGV
Sbjct: 783 IRGYCKVGRLVEAALLYEHMLRNGVKPD----DLLQRALSEYNPPK-------WLMSKGV 831
Query: 416 IPHKQ 420
H +
Sbjct: 832 WVHDK 836
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 32/295 (10%)
Query: 10 ECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYS---- 65
E +L EA+ +F+R K G+ P+ + + +ID CK + L++ M+ + +
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 66 ----------------------------IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMM 97
+ PD +TYN +I G+C + +L AE++ +
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
Query: 98 EKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME 157
PN T LI + ++ A R+ M +KG N+V Y ++ W D+E
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723
Query: 158 GVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILI 217
G L M + I P +YSI+ GLC+ G V+EA + ++ L+ D ++ ILI
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 218 NYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMM 272
C+ L A L M G+ PD + +L + + + + V V++K M
Sbjct: 784 RGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVHDKPM 838
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 3/256 (1%)
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+L C+ G V +A FH ++E S N ++ L + + A +LL+ +
Sbjct: 223 VLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDC 280
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G P++VTF +LI+G CK G ++ A +++ M + G +P+L+ Y+++I+G K
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 300 XXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
+ DV+ +++ I+ Y SG + A M GI+ N TY LI
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
LC+ G I +A + ++ +G P +TY+ LI F K + L++ M+ G P
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 419 KQTYKAVVSPLLQEGV 434
Y +V L ++G+
Sbjct: 461 VVIYGVLVDGLSKQGL 476
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 126/304 (41%), Gaps = 13/304 (4%)
Query: 143 YNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL------------CRNGN 190
+ T+ H L G + + M+ NR SI + L CR G
Sbjct: 102 FYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGM 161
Query: 191 VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT-FG 249
V++A + + ++ S ++N L S+ + + G+ P V+ G
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHG 221
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM 309
++D +G V A+ + +M+ G + +V N V+ GL ++
Sbjct: 222 FVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCG 281
Query: 310 NLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
+V+T+ TLING+C G++D AF M+ GI + Y+TLI+ K G +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
+L + +G D + ++ I + K ++ M+ +G+ P+ TY ++ L
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 430 LQEG 433
Q+G
Sbjct: 402 CQDG 405
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 200/431 (46%), Gaps = 43/431 (9%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACK---MGAMDLALKVVSKM 58
+V+ LC+ ++ ++ + GI P T+N II+ K ++ LKV+ K
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 59 EVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRA 118
V VY + +TY L+ K GK++ AEKL +EM E+ I +V Y +LI R
Sbjct: 289 GV--VY----NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
+++ AF L DE+ +KGL +S Y +I + G+M +L++ M + + +
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ L G CR G V+EA + + + D F+ N + + R AKQ L M
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXX 298
G+ V++ +LID +CKEGNVE A +++ +M G +PN
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN------------------- 503
Query: 299 XXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
ITYN +I YC GKI EA M+ G+ + TY +LI+
Sbjct: 504 ---------------AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
C ++ +A L M L+G + +TYT++I+ SK +E L+D M KG
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Query: 419 KQTYKAVVSPL 429
+ Y A++ +
Sbjct: 609 NKVYTALIGSM 619
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 196/422 (46%), Gaps = 8/422 (1%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
E + VF +K G+ + + + + A K +DL L++ +M V S I S+T
Sbjct: 172 EGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRM-VDSGVKITVYSLT-- 228
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
++ G C+ G++ ++KL E K I P TY T+I+ Y + R + M K
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
G+V N V Y ++ G M L M + I D Y+ L CR GN+ A
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
F ++ E L ++++ LI+ +C+ + A+ L+ M +G+ V F +LIDG
Sbjct: 349 FLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN---L 311
+C++G V+ A +Y+ M + G + ++ N++ + C M
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS--CFNRLKRYDEAKQWLFRMMEGGVK 466
Query: 312 FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
++Y LI+ YC G ++EA M + G+ N TYN +I CK G I++A++L
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Query: 372 MKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
M G PD TYT LI + +E ++L M LKG+ + TY ++S L +
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSK 586
Query: 432 EG 433
G
Sbjct: 587 AG 588
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 44/353 (12%)
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSL---LISSMVDNRIPPDKFT 177
EE R+ D M+KKGL S+ + I +L + L + MVD+ + ++
Sbjct: 170 FEEGLRVFDYMVKKGL---SIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSG--------- 228
+I+ +GLCR G V ++ K + + +A+++N +IN + + SG
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 229 --------------------------AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVE 262
A++L M RG+ D+ + SLI +C++GN++
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 263 NAVQVYEKMMKSGEKPNLVLYNSVINGLCK--EEXXXXXXXXXXXXXXMNLFDVITYNTL 320
A +++++ + G P+ Y ++I+G+CK E +N+ V+ +NTL
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV-FNTL 405
Query: 321 INGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGF 380
I+GYC G +DEA M+ G A+ T NT+ + +L +AK+ + M+ G
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Query: 381 VPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
++YT LI + K+ + EE +L M KGV P+ TY ++ ++G
Sbjct: 466 KLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 90/210 (42%), Gaps = 1/210 (0%)
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
NG E + +++ L D S + + + + ++ M G+ + +
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXX 307
+++G C+ G VE + ++ ++ G KP YN++IN K+
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 308 XMN-LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
+++ +TY L+ +GK+ +A M+ GI ++ Y +LI++ C+ G+++
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFSK 396
+A L + +G P TY LI K
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+IYA CK+ K+ EA + +G+ P+ T+ +I C +D A+++ S+
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE--- 564
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLI 112
M + + +S+TY +I G K GK A L +EM K + + Y LI
Sbjct: 565 MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 211/425 (49%), Gaps = 5/425 (1%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
+L EA+ + G+ P+ +T N ++++A ++G ++ A V +M SV + PDS
Sbjct: 763 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM---SVRGVVPDSS 819
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
+Y ++ G + GK+ A++ M+++ +P+ T ++ + A +M
Sbjct: 820 SYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM 879
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
+ G N + + ++I L +G ++ ++ MV N P+ +T++ L GLC+ G
Sbjct: 880 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 939
Query: 192 NEAFKFHSKILENNLIE-DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGS 250
+AF+ K++ ++ + + ++ +I C+ + L+ A+ L + M +GL P++ T+ +
Sbjct: 940 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 999
Query: 251 LIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN 310
LI+GHCK G+ A ++ M G PN+ YN+ I+ LCK+
Sbjct: 1000 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 1059
Query: 311 L-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
L D +TY LI C I++A AF M G A+ N LI C+ +++++
Sbjct: 1060 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 1119
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
L ++++ G +P TYT +I+ + K+ + +K M G +P TY +++S L
Sbjct: 1120 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 1179
Query: 430 LQEGV 434
++ +
Sbjct: 1180 CKKSM 1184
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 2/291 (0%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I LCK+ + +A + +++G PNV T +ID CK G + A ++ K+
Sbjct: 894 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 953
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
Y +P+ TY +IGG+CK KL AE L + M E+ + PNV TY TLI+G+ +A S
Sbjct: 954 TY--KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFG 1011
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
A+ L + M +G + N YN I L + L++ + D TY+IL
Sbjct: 1012 RAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 1071
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
+ C+ ++N+A F ++ + D +NILI CR + +++L + GL+
Sbjct: 1072 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 1131
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
P T+ S+I +CKEG+++ A++ + M + G P+ Y S+I+GLCK+
Sbjct: 1132 PTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 1182
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 188/391 (48%), Gaps = 5/391 (1%)
Query: 9 KECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRP 68
++ K+ EA ++ G P+ T +I+ C+ G ++ A+ KM + +P
Sbjct: 830 RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG---FKP 886
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
+ I + LI G CK G + A ++ EM+ PNV T+ LIDG + E+AFRL
Sbjct: 887 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 946
Query: 129 DEMMKKGLVMNSV-IYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR 187
++++ +V Y ++I E + +L S M + + P+ TY+ L G C+
Sbjct: 947 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 1006
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
G+ A++ + + + + + +++N I+ LC+ + A +LL + GL D VT
Sbjct: 1007 AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVT 1066
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXX 307
+ LI CK+ ++ A+ + +M K+G + ++ L N +I C+++
Sbjct: 1067 YTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVV 1126
Query: 308 XMNLFDVI-TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
+ L TY ++I+ YC G ID A + MK G + TY +LI+ LCK +
Sbjct: 1127 SLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVD 1186
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFSKK 397
+A +L + MI +G P +T L + K+
Sbjct: 1187 EACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 1217
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 191/421 (45%), Gaps = 48/421 (11%)
Query: 61 MSVYSIRPDSITYN-----------CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYA 109
M +Y + DS+ N C++ F ++G+L A + +M + + P+ T
Sbjct: 728 MRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMN 787
Query: 110 TLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDN 169
+++ +E A + DEM +G+V +S Y ++ + +G ++ ++ M+
Sbjct: 788 CVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR 847
Query: 170 RIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGA 229
PD T +++ LC NG VN A + K+++ + + LI+ LC+ ++ A
Sbjct: 848 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 907
Query: 230 KQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE-KPNLVLYNSVIN 288
++L M G P++ T +LIDG CK G E A +++ K+++S KPN+ Y S+I
Sbjct: 908 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 967
Query: 289 GLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAA 347
G CKE+ LF +V TY TLING+C +G A+ M + G
Sbjct: 968 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMP 1027
Query: 348 NHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYT------------------- 388
N TYN I+ LCK +A EL+ G D +TYT
Sbjct: 1028 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFF 1087
Query: 389 ----------------ILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
ILI +F ++ +E +L +V G+IP K+TY +++S +E
Sbjct: 1088 CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKE 1147
Query: 433 G 433
G
Sbjct: 1148 G 1148
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 6/292 (2%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I CKE KL A +F R + G++PNV T+ +I+ CK G+ A ++ M +M
Sbjct: 965 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL---MNLMG 1021
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
P+ TYN I CK + A +L N+ + + TY LI + +
Sbjct: 1022 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 1081
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+A M K G + + N +I + M+ L +V + P K TY+ +
Sbjct: 1082 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 1141
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
C+ G+++ A K+ + + + D+F++ LI+ LC+ + + A +L +M RGL
Sbjct: 1142 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 1201
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
P VT +L +CK + NA+ + E + K K + +++ LC E+
Sbjct: 1202 PPEVTRVTLAYEYCKRNDSANAMILLEPLDK---KLWIRTVRTLVRKLCSEK 1250
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 115/278 (41%), Gaps = 13/278 (4%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N I +LCK+ + EA + ++ G+ + VT+ ++I CK ++ AL +
Sbjct: 1033 NAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCR--- 1089
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M+ D N LI FC+ K+ +E+L ++ ++P TY ++I Y +
Sbjct: 1090 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 1149
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ A + M + G V +S Y ++I L + ++ L +M+D + P + T
Sbjct: 1150 IDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT 1209
Query: 181 LTKGLC-RNGNVNEAFKFHSKILENNLIEDAFSHNI--LINYLCRSNNLSGAKQLLASMY 237
L C RN + N + IL L + + + L+ LC + A +
Sbjct: 1210 LAYEYCKRNDSAN------AMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLL 1263
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
+ D VT + C E N V + + G
Sbjct: 1264 EKDSSADRVTLAAFTTA-CSESGKNNLVTDLTERISRG 1300
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 57/115 (49%)
Query: 320 LINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQG 379
++ + G+++EA M+N G+ + T N ++ +LG I+ A+ + M ++G
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813
Query: 380 FVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
VPD +Y +++ + +E + M+ +G IP T +++ L + G+
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 868
>AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22768974-22771274 REVERSE
Length = 766
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 204/435 (46%), Gaps = 43/435 (9%)
Query: 2 VVIYALCKECKLLEAMSVFYR----SLKHG--IWPNVVTFNMIIDVACKMGAMDLALKVV 55
++I LCK ++ EA+ VF + G I + + FN +ID CK+G + A +++
Sbjct: 334 ILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
+M++ + P+++TYNCLI G+C+ GKL A+++ + M E +I PNV T T++ G
Sbjct: 394 VRMKLEERCA--PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM 451
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
R L A +M K+G+ N V Y T+IH ++E M++ PD
Sbjct: 452 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
Y L GLC+ ++A + K+ E D ++N+LI C NN ++L
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTD 571
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
M G PD +T+ +LI K + E+ ++ E+M + G P
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT---------------- 615
Query: 296 XXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMK-NAGIAANHATYNT 354
V TY +I+ YC+ G++DEA M ++ + N YN
Sbjct: 616 ------------------VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 355 LINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKG 414
LIN KLG+ QA L + M ++ P+ TY L ++K E ++KL D MV +
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 415 VIPHKQTYKAVVSPL 429
P++ T + ++ L
Sbjct: 718 CEPNQITMEILMERL 732
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 215/472 (45%), Gaps = 51/472 (10%)
Query: 1 NVVIYALCKECKLLEA--MSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM 58
++V++ + K L E +++ R HG+ PN V I CK + A ++S +
Sbjct: 226 DIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDL 285
Query: 59 EVMSVYSIRP-DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR 117
+ + P ++ +N L+ + ++ L +M E I P+V T LI+ +
Sbjct: 286 ----MKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCK 341
Query: 118 ARSLEEAFRLCDEMMKKG------LVMNSVIYNTVIHWLYVEGDM-EGVSLLISSMVDNR 170
+R ++EA + ++M K + +S+ +NT+I L G + E LL+ ++ R
Sbjct: 342 SRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER 401
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
P+ TY+ L G CR G + A + S++ E+ + + + N ++ +CR + L+ A
Sbjct: 402 CAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
M G+ ++VT+ +LI C NVE A+ YEKM+++G P+ +Y ++I+GL
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 291 CKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
C+ D++ YN LI +C+ ++ + M+ G +
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDS 581
Query: 350 ATYNTLINFL-----------------------------------CKLGHIQQAKELMKV 374
TYNTLI+F C +G + +A +L K
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 375 MILQGFV-PDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
M L V P+ + Y ILI +FSK + + + L + M +K V P+ +TY A+
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 196/438 (44%), Gaps = 50/438 (11%)
Query: 36 NMIIDVACKMGAMDLALKVVSKM-EVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEK--- 91
N+++DV + G +D A KV+ +M + SV+ P+ IT + ++ K G+L EK
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFP--PNRITADIVLHEVWK-GRLLTEEKIIA 245
Query: 92 LKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLY 151
L + + PN I + A+ + ++MK + + +N ++ L
Sbjct: 246 LISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLG 305
Query: 152 VEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKIL-----ENNL 206
D+ ++ L+ M + +I PD T IL LC++ V+EA + K+ + N+
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNV 365
Query: 207 IE-DAFSHNILINYLCRSNNLSGAKQLLASMYVRGL-VPDIVTFGSLIDGHCKEGNVENA 264
I+ D+ N LI+ LC+ L A++LL M + P+ VT+ LIDG+C+ G +E A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA 425
Query: 265 VQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLING 323
+V +M + KPN+V N+++ G+C+ + +V+TY TLI+
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 324 YCNSGKIDEAFAFSFAM-----------------------------------KNAGIAAN 348
C+ +++A + M K G + +
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 349 HATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHD 408
YN LI C + ++ E++ M +G PD ITY LI+ F K E V ++ +
Sbjct: 546 LLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 409 YMVLKGVIPHKQTYKAVV 426
M G+ P TY AV+
Sbjct: 606 QMREDGLDPTVTTYGAVI 623
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 179/381 (46%), Gaps = 30/381 (7%)
Query: 71 ITYNCLIGGFCKMGKLTMA----EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
+ N LI F +MG + + E+L + M N + ++D R +++AF+
Sbjct: 153 VATNLLIRWFGRMGMVNQSVLVYERLDSNM------KNSQVRNVVVDVLLRNGLVDDAFK 206
Query: 127 LCDEMMKKGLVM--NSVIYNTVIHWLYVEGDM---EGVSLLISSMVDNRIPPDKFTYSIL 181
+ DEM++K V N + + V+H ++ +G + E + LIS + + P+ +
Sbjct: 207 VLDEMLQKESVFPPNRITADIVLHEVW-KGRLLTEEKIIALISRFSSHGVSPNSVWLTRF 265
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
LC+N N A+ S +++N +A N L++ L R+ ++S L+ M +
Sbjct: 266 ISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE------KPNLVLYNSVINGLCKEEX 295
PD+VT G LI+ CK V+ A++V+EKM K + + +N++I+GLCK
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCK--- 382
Query: 296 XXXXXXXXXXXXXMNLFD-----VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHA 350
M L + +TYN LI+GYC +GK++ A MK I N
Sbjct: 383 VGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 351 TYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYM 410
T NT++ +C+ + A M +G + +TY LI + + E+ + ++ M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 411 VLKGVIPHKQTYKAVVSPLLQ 431
+ G P + Y A++S L Q
Sbjct: 503 LEAGCSPDAKIYYALISGLCQ 523
>AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10374927-10377227 FORWARD
Length = 766
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 203/435 (46%), Gaps = 43/435 (9%)
Query: 2 VVIYALCKECKLLEAMSVFY----RSLKHG--IWPNVVTFNMIIDVACKMGAMDLALKVV 55
++I LCK ++ EA+ VF + G I + + FN +ID CK+G + A +++
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
+M++ P+++TYNCLI G+C+ GKL A+++ + M E +I PNV T T++ G
Sbjct: 394 VRMKLEE--RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM 451
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
R L A +M K+G+ N V Y T+IH ++E M++ PD
Sbjct: 452 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
Y L GLC+ ++A + K+ E D ++N+LI C NN ++L
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
M G PD +T+ +LI K + E+ ++ E+M + G P
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT---------------- 615
Query: 296 XXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMK-NAGIAANHATYNT 354
V TY +I+ YC+ G++DEA M ++ + N YN
Sbjct: 616 ------------------VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 355 LINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKG 414
LIN KLG+ QA L + M ++ P+ TY L ++K E ++KL D MV +
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 415 VIPHKQTYKAVVSPL 429
P++ T + ++ L
Sbjct: 718 CEPNQITMEILMERL 732
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 216/472 (45%), Gaps = 51/472 (10%)
Query: 1 NVVIYALCKECKLLEA--MSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM 58
++V++ + KE L E +++ R HG+ PN V I CK + A ++S +
Sbjct: 226 DIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDL 285
Query: 59 EVMSVYSIRP-DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR 117
+ + P ++ +N L+ + ++ L +M E I P+V T LI+ +
Sbjct: 286 ----MKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCK 341
Query: 118 ARSLEEAFRLCDEMMKKG------LVMNSVIYNTVIHWLYVEGDM-EGVSLLISSMVDNR 170
+R ++EA + ++M K + +S+ +NT+I L G + E LL+ ++ R
Sbjct: 342 SRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER 401
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
P+ TY+ L G CR G + A + S++ E+ + + + N ++ +CR + L+ A
Sbjct: 402 CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
M G+ ++VT+ +LI C NVE A+ YEKM+++G P+ +Y ++I+GL
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 291 CKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
C+ D++ YN LI +C+ ++ + M+ G +
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 350 ATYNTLINFL-----------------------------------CKLGHIQQAKELMKV 374
TYNTLI+F C +G + +A +L K
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 375 MILQGFV-PDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
M L V P+ + Y ILI +FSK + + + L + M +K V P+ +TY A+
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 177/380 (46%), Gaps = 28/380 (7%)
Query: 71 ITYNCLIGGFCKMGKLTMA----EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
+ LI F +MG + + E+L + M N + ++D R +++AF+
Sbjct: 153 VATKLLIRWFGRMGMVNQSVLVYERLDSNM------KNSQVRNVVVDVLLRNGLVDDAFK 206
Query: 127 LCDEMMKKGLVM--NSVIYNTVIHWLYVEGDM--EGVSLLISSMVDNRIPPDKFTYSILT 182
+ DEM++K V N + + V+H ++ E + E + LIS + + P+ +
Sbjct: 207 VLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFI 266
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
LC+N N A+ S +++N +A N L++ L R+ ++S L+ M +
Sbjct: 267 SSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIR 326
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE------KPNLVLYNSVINGLCKEEXX 296
PD+VT G LI+ CK V+ A++V+E+M K + + +N++I+GLCK
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK---V 383
Query: 297 XXXXXXXXXXXXMNLFD-----VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHAT 351
M L + +TYN LI+GYC +GK++ A MK I N T
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVT 443
Query: 352 YNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV 411
NT++ +C+ + A M +G + +TY LI + + E+ + ++ M+
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 412 LKGVIPHKQTYKAVVSPLLQ 431
G P + Y A++S L Q
Sbjct: 504 EAGCSPDAKIYYALISGLCQ 523
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 216/442 (48%), Gaps = 12/442 (2%)
Query: 1 NVVIY-----ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
NVV Y CK+ + EA VF + + + + +++D C+ G + A++V
Sbjct: 295 NVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVH 354
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
M + V R ++ N LI G+CK G+L AE++ + M + + P+ TY TL+DGY
Sbjct: 355 DNMIEIGV---RTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
RA ++EA +LCD+M +K +V + YN ++ G V L M+ + D+
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
+ S L + L + G+ NEA K +L L+ D + N++I+ LC+ ++ AK++L +
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
+ + P + T+ +L G+ K GN++ A V E M + G P + +YN++I+G K
Sbjct: 532 VNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRH 591
Query: 296 XXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNT 354
L V TY LI G+CN G ID+A+A F M GI N +
Sbjct: 592 LNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSK 651
Query: 355 LINFLCKLGHIQQAKELM-KVMILQGFVPDYITYTILITSFSKKCSPEEVI--KLHDYMV 411
+ N L +L I +A L+ K++ +P Y + + + + C + I + +
Sbjct: 652 IANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTP 711
Query: 412 LKGVIPHKQTYKAVVSPLLQEG 433
K ++P+ Y ++ L + G
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAG 733
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 197/400 (49%), Gaps = 13/400 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKH--GIWPNVVTFNMIIDVACKMGAMDLALKVVSKM 58
++V+ A C+ + +AM VF + + G+ NVVT+N +I+ +G ++ +V +
Sbjct: 229 SIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV---L 284
Query: 59 EVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRA 118
+MS + + +TY LI G+CK G + AE + + EK +V + Y L+DGY R
Sbjct: 285 RLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRT 344
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
+ +A R+ D M++ G+ N+ I N++I+ G + + S M D + PD TY
Sbjct: 345 GQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTY 404
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ L G CR G V+EA K ++ + ++ ++NIL+ R L M
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXX 298
RG+ D ++ +L++ K G+ A++++E ++ G + + N +I+GLCK E
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME---K 521
Query: 299 XXXXXXXXXXMNLFD----VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNT 354
+N+F V TY L +GY G + EAFA M+ GI YNT
Sbjct: 522 VNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNT 581
Query: 355 LINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
LI+ K H+ + +L+ + +G P TY LIT +
Sbjct: 582 LISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGW 621
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 219/507 (43%), Gaps = 78/507 (15%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
V++ C+ ++ +A+ V ++ G+ N N +I+ CK G + A ++ S+M
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM--- 392
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
+ +S++PD TYN L+ G+C+ G + A KL ++M +K++VP V TY L+ GYSR +
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME-------------------GVSLL 162
+ L M+K+G+ + + +T++ L+ GD ++++
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Query: 163 ISSM------------VDN----RIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
IS + +DN R P TY L+ G + GN+ EAF + +
Sbjct: 513 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
+N LI+ + +L+ L+ + RGL P + T+G+LI G C G ++ A
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 632
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-------------- 312
+M++ G N+ + + + N L + + +L
Sbjct: 633 TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEAS 692
Query: 313 -------------------------DVITYNTLINGYCNSGKIDEAFA-FSFAMKNAGIA 346
+ I YN I G C +GK+++A FS + +
Sbjct: 693 ATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFI 752
Query: 347 ANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKL 406
+ TY LI+ G I +A L M L+G +P+ +TY LI K + + +L
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRL 812
Query: 407 HDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ KG+ P+ TY ++ L++ G
Sbjct: 813 LHKLPQKGITPNAITYNTLIDGLVKSG 839
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 198/417 (47%), Gaps = 28/417 (6%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
+ +S++ LK G+ + ++ + +++ K+G + A+K+ E + + D+IT N
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL---WENVLARGLLTDTITLN 510
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
+I G CKM K+ A+++ + + P V+TY L GY + +L+EAF + + M +K
Sbjct: 511 VMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK 570
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
G+ +YNT+I + + V+ L+ + + P TY L G C G +++A
Sbjct: 571 GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
+ +++E + + + + N L R + + A LL IV F L+ G
Sbjct: 631 YATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQK---------IVDFDLLLPG 681
Query: 255 HCK-----EGNVENAVQVYEKMMKSGEK--------PNLVLYNSVINGLCKEEXXXXXXX 301
+ E + ++ +K+ +S E PN ++YN I GLCK
Sbjct: 682 YQSLKEFLEASATTCLKT-QKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARK 740
Query: 302 XXXXXXXMNLF--DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ F D TY LI+G +G I++AF M GI N TYN LI L
Sbjct: 741 LFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGL 800
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
CKLG++ +A+ L+ + +G P+ ITY LI K + E ++L + M+ KG++
Sbjct: 801 CKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 194/393 (49%), Gaps = 5/393 (1%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
F+MI+ V + G + AL V M Y P ++ N L+ + G+ +A + +
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNM---GNYGRIPSLLSCNSLLSNLVRKGENFVALHVYD 214
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK-GLVMNSVIYNTVIHWLYVE 153
+M+ ++ P+V T + +++ Y R+ ++++A E GL +N V YN++I+ +
Sbjct: 215 QMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
GD+EG++ ++ M + + + TY+ L KG C+ G + EA + E L+ D +
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
+L++ CR+ + A ++ +M G+ + SLI+G+CK G + A Q++ +M
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 274 SGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDE 332
KP+ YN++++G C+ + V+TYN L+ GY G +
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 333 AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
+ M G+ A+ + +TL+ L KLG +A +L + ++ +G + D IT ++I+
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMIS 514
Query: 393 SFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
K E ++ D + + P QTY+A+
Sbjct: 515 GLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL 547
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 2/272 (0%)
Query: 164 SSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE-DAFSHNILINYLCR 222
M+ + PD FT SI+ CR+GNV++A F + + +E + ++N LIN
Sbjct: 214 DQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAM 273
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVL 282
++ G ++L M RG+ ++VT+ SLI G+CK+G +E A V+E + + + +
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM 333
Query: 283 YNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITY-NTLINGYCNSGKIDEAFAFSFAMK 341
Y +++G C+ + + T N+LINGYC SG++ EA M
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 342 NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
+ + +H TYNTL++ C+ G++ +A +L M + VP +TY IL+ +S+ +
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 402 EVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+V+ L M+ +GV + + ++ L + G
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLG 485
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 142/302 (47%), Gaps = 42/302 (13%)
Query: 13 LLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSIT 72
L EA +V + GI+P + +N +I A K ++ KV + + + P T
Sbjct: 557 LKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLN---KVADLVIELRARGLTPTVAT 613
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
Y LI G+C +G + A EM+EK I NV + + + R ++EA L +++
Sbjct: 614 YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV 673
Query: 133 --------------------------------------KKGLVMNSVIYNTVIHWLYVEG 154
KK LV N+++YN I L G
Sbjct: 674 DFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAG 733
Query: 155 DMEGVSLLISSMVD-NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
+E L S ++ +R PD++TY+IL G G++N+AF ++ +I + ++
Sbjct: 734 KLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTY 793
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
N LI LC+ N+ A++LL + +G+ P+ +T+ +LIDG K GNV A+++ EKM++
Sbjct: 794 NALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIE 853
Query: 274 SG 275
G
Sbjct: 854 KG 855
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 4/141 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIW-PNVVTFNMIIDVACKMGAMDLALKVVSKME 59
NV I LCK KL +A +F L + P+ T+ ++I G ++ A + +M
Sbjct: 723 NVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM- 781
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
++ I P+ +TYN LI G CK+G + A++L +++ +K I PN TY TLIDG ++
Sbjct: 782 --ALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 839
Query: 120 SLEEAFRLCDEMMKKGLVMNS 140
++ EA RL ++M++KGLV S
Sbjct: 840 NVAEAMRLKEKMIEKGLVRGS 860
>AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-10672740
REVERSE
Length = 806
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 205/434 (47%), Gaps = 6/434 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
V+ + + +L +A+ V + G+ PN++ N IDV + ++ AL+ + +M+V+
Sbjct: 248 VMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVG 307
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
+ P+ +TYNC+I G+C + ++ A +L +M K +P+ +Y T++ + + +
Sbjct: 308 IV---PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 123 EAFRLCDEMMKK-GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
E L +M K+ GLV + V YNT+IH L + + + DK YS +
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 182 TKGLCRNGNVNEAFKFHSKIL-ENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
LC+ G ++EA +++L + + D ++ ++N CR + AK+LL M+ G
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
P+ V++ +L++G C+ G A ++ + PN + Y+ +++GL +E
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 544
Query: 301 XXXXXXXXMNLFD-VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
F + N L+ C G+ EA F N G A N + T+I+
Sbjct: 545 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 604
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
C+ + A ++ M L D TYT L+ + KK E +L M+ KG+ P
Sbjct: 605 CQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTP 664
Query: 420 QTYKAVVSPLLQEG 433
TY+ V+ Q G
Sbjct: 665 VTYRTVIHRYCQMG 678
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 199/416 (47%), Gaps = 6/416 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N I + +L +A+ R GI PNVVT+N +I C + ++ A+++ +E
Sbjct: 281 NTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL---LED 337
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMM-EKDIVPNVRTYATLIDGYSRAR 119
M PD ++Y ++G CK ++ L +M E +VP+ TY TLI ++
Sbjct: 338 MHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHD 397
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDN-RIPPDKFTY 178
+EA + +KG ++ + Y+ ++H L EG M LI+ M+ PPD TY
Sbjct: 398 HADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTY 457
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ + G CR G V++A K + + + S+ L+N +CR+ A++++
Sbjct: 458 TAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEE 517
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXX 298
P+ +T+ ++ G +EG + A V +M+ G P V N ++ LC++
Sbjct: 518 HWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHE 577
Query: 299 XXXXXXXXXXMN-LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
+V+ + T+I+G+C + ++D A + M A+ TY TL++
Sbjct: 578 ARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD 637
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLK 413
L K G I +A ELMK M+ +G P +TY +I + + ++++ + + M+ +
Sbjct: 638 TLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 182/417 (43%), Gaps = 38/417 (9%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I+ L K EA+ + + G + + ++ I+ CK G M A ++++M
Sbjct: 387 NTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM-- 444
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+S PD +TY ++ GFC++G++ A+KL M PN +Y L++G R
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
EA + + + NS+ Y+ ++H L EG + ++ MV P ++
Sbjct: 505 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINL 564
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + LCR+G +EA KF + L + + +I+ C+++ L A +L MY+
Sbjct: 565 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 624
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
D+ T+ +L+D K+G + A ++ +KM+ G P V
Sbjct: 625 KHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPV------------------- 665
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
TY T+I+ YC GK+D+ A M + YN +I LC
Sbjct: 666 ---------------TYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVIEKLC 708
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
LG +++A L+ ++ D T L+ + KK P K+ M + +IP
Sbjct: 709 VLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIP 765
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 165/373 (44%), Gaps = 3/373 (0%)
Query: 64 YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEE 123
+ R D + Y ++ K + ++ M + I ++ ++ YSRA L +
Sbjct: 201 WRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRD 260
Query: 124 AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
A ++ M + G+ N +I NT I +E + M I P+ TY+ + +
Sbjct: 261 ALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIR 320
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR-GLV 242
G C V EA + + + D S+ ++ YLC+ + + L+ M GLV
Sbjct: 321 GYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLV 380
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
PD VT+ +LI K + + A+ + + G + + + Y+++++ LCKE
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 303 XXXXXXMNLF--DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
DV+TY ++NG+C G++D+A M G N +Y L+N +C
Sbjct: 441 INEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC 500
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
+ G +A+E+M + + P+ ITY++++ ++ E + MVLKG P
Sbjct: 501 RTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPV 560
Query: 421 TYKAVVSPLLQEG 433
++ L ++G
Sbjct: 561 EINLLLQSLCRDG 573
>AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29920334-29922676 REVERSE
Length = 780
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 189/412 (45%), Gaps = 45/412 (10%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+++ L K+ + +A +F GI PN VT+ ++I C+ G+ D A K+ +M+
Sbjct: 202 GILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQT 261
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKD-IVPNVRTYATLIDGYSRAR 119
Y PDS+ +N L+ GFCK+G++ A +L + EKD V +R Y++LIDG RAR
Sbjct: 262 SGNY---PDSVAHNALLDGFCKLGRMVEAFELLR-LFEKDGFVLGLRGYSSLIDGLFRAR 317
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+AF L M+KK I PD Y+
Sbjct: 318 RYTQAFELYANMLKKN-----------------------------------IKPDIILYT 342
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
IL +GL + G + +A K S + + D + +N +I LC L + L M
Sbjct: 343 ILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSET 402
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE---EXX 296
PD T LI C+ G V A +++ ++ KSG P++ +N++I+GLCK +
Sbjct: 403 ESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA 462
Query: 297 XXXXXXXXXXXXMNLFDVITY--NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNT 354
+LF +++ N + SG I +A+ + G + + +YN
Sbjct: 463 RLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNV 522
Query: 355 LINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKL 406
LIN C+ G I A +L+ V+ L+G PD +TY LI + EE KL
Sbjct: 523 LINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 198/450 (44%), Gaps = 44/450 (9%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
G+ + F ++I KMG +A K V M + RPD TYN ++ +
Sbjct: 122 GVSVDSYCFCVLISAYAKMG---MAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVF 178
Query: 87 TM-AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNT 145
M A + NEM++ + PN+ T+ L+DG + +A ++ D+M +G+ N V Y
Sbjct: 179 FMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
+I L G + L M + PD ++ L G C+ G + EAF+ ++
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
+ ++ LI+ L R+ + A +L A+M + + PDI+ + LI G K G +E+A+
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDAL 358
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGY 324
++ M G P+ YN+VI LC F D T+ LI
Sbjct: 359 KLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSM 418
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM--------- 375
C +G + EA ++ +G + + AT+N LI+ LCK G +++A+ L+ M
Sbjct: 419 CRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLF 478
Query: 376 -------------------ILQ-----------GFVPDYITYTILITSFSKKCSPEEVIK 405
IL+ G PD ++Y +LI F + + +K
Sbjct: 479 LRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALK 538
Query: 406 LHDYMVLKGVIPHKQTYKAVVSPLLQEGVE 435
L + + LKG+ P TY +++ L + G E
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 160/369 (43%), Gaps = 49/369 (13%)
Query: 108 YATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMV 167
+ +ID S + ++ +E+ G+ ++S + +I G E M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 168 DNRIPPDKFTYSILTKGLCRNG-NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNL 226
+ PD FTY+++ + + R AF ++++L+ N + ++ IL++ L +
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 227 SGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSV 286
S A+++ M RG+ P+ VT+ LI G C+ G+ ++A +++ +M SG P+ V +N++
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 287 INGLCKEEXXXXXXXXXXXXXXMNLFD-------VITYNTLING-------------YCN 326
++G CK + LF+ + Y++LI+G Y N
Sbjct: 275 LDGFCK------LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYAN 328
Query: 327 ----------------------SGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGH 364
+GKI++A +M + GI+ + YN +I LC G
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL 388
Query: 365 IQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKA 424
+++ + L M PD T+TILI S + E ++ + G P T+ A
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNA 448
Query: 425 VVSPLLQEG 433
++ L + G
Sbjct: 449 LIDGLCKSG 457
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 119/302 (39%), Gaps = 78/302 (25%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++I ++C+ + EA +F K G P+V TFN +ID CK G + A ++ KMEV
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Query: 61 MSVYSI------------------------------------RPDSITYNCLIGGFCKMG 84
S+ PD ++YN LI GFC+ G
Sbjct: 472 GRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAG 531
Query: 85 KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYN 144
+ A KL N + K + P+ TY TLI+G R EEAF+L K + +Y
Sbjct: 532 DIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYR 589
Query: 145 TVIHW----------------------------------LYVEGDMEGVSLLISSMVDNR 170
+++ W + EG+ E + +++
Sbjct: 590 SLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERA---LRRLIELD 646
Query: 171 IPPDKFT---YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLS 227
D+ T Y+I GLC++G +EA S + E ++ S LI+ LC+ L
Sbjct: 647 TRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLD 706
Query: 228 GA 229
A
Sbjct: 707 AA 708
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 106/293 (36%), Gaps = 72/293 (24%)
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
++I+ L N Q L + G+ D F LI + K G E AV+ + +M +
Sbjct: 96 GLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKE 155
Query: 274 SGEKPNLVLYNSVINGLCKEEXXXXXXXXX---------------------------XXX 306
+P++ YN ++ + +EE
Sbjct: 156 FDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTS 215
Query: 307 XXMNLFD----------VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
+FD +TY LI+G C G D+A + M+ +G + +N L+
Sbjct: 216 DAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALL 275
Query: 357 NFLCKLGHIQQAKELMKVMILQGFV----------------------------------- 381
+ CKLG + +A EL+++ GFV
Sbjct: 276 DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK 335
Query: 382 PDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
PD I YTILI SK E+ +KL M KG+ P Y AV+ L G+
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL 388
>AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10332375-10334558 REVERSE
Length = 727
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 194/417 (46%), Gaps = 43/417 (10%)
Query: 2 VVIYALCKECKLLEAMSVFY----RSLKHG--IWPNVVTFNMIIDVACKMGAMDLALKVV 55
++I LCK ++ EA+ VF + G I + + FN +ID CK+G + A +++
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
+M++ P+++TYNCLI G+C+ GKL A+++ + M E +I PNV T T++ G
Sbjct: 394 VRMKLEE--RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM 451
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
R L A +M K+G+ N V Y T+IH ++E M++ PD
Sbjct: 452 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
Y L GLC+ ++A + K+ E D ++N+LI C NN ++L
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
M G PD +T+ +LI K + E+ ++ E+M + G P
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT---------------- 615
Query: 296 XXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMK-NAGIAANHATYNT 354
V TY +I+ YC+ G++DEA M ++ + N YN
Sbjct: 616 ------------------VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 355 LINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV 411
LIN KLG+ QA L + M ++ P+ TY L ++K E ++KL D MV
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 216/472 (45%), Gaps = 51/472 (10%)
Query: 1 NVVIYALCKECKLLEA--MSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM 58
++V++ + KE L E +++ R HG+ PN V I CK + A ++S +
Sbjct: 226 DIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDL 285
Query: 59 EVMSVYSIRP-DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR 117
+ + P ++ +N L+ + ++ L +M E I P+V T LI+ +
Sbjct: 286 ----MKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCK 341
Query: 118 ARSLEEAFRLCDEMMKKG------LVMNSVIYNTVIHWLYVEGDM-EGVSLLISSMVDNR 170
+R ++EA + ++M K + +S+ +NT+I L G + E LL+ ++ R
Sbjct: 342 SRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER 401
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
P+ TY+ L G CR G + A + S++ E+ + + + N ++ +CR + L+ A
Sbjct: 402 CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
M G+ ++VT+ +LI C NVE A+ YEKM+++G P+ +Y ++I+GL
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 291 CKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
C+ D++ YN LI +C+ ++ + M+ G +
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 350 ATYNTLINFL-----------------------------------CKLGHIQQAKELMKV 374
TYNTLI+F C +G + +A +L K
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 375 MILQGFV-PDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
M L V P+ + Y ILI +FSK + + + L + M +K V P+ +TY A+
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 177/380 (46%), Gaps = 28/380 (7%)
Query: 71 ITYNCLIGGFCKMGKLTMA----EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
+ LI F +MG + + E+L + M N + ++D R +++AF+
Sbjct: 153 VATKLLIRWFGRMGMVNQSVLVYERLDSNM------KNSQVRNVVVDVLLRNGLVDDAFK 206
Query: 127 LCDEMMKKGLVM--NSVIYNTVIHWLYVEGDM--EGVSLLISSMVDNRIPPDKFTYSILT 182
+ DEM++K V N + + V+H ++ E + E + LIS + + P+ +
Sbjct: 207 VLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFI 266
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
LC+N N A+ S +++N +A N L++ L R+ ++S L+ M +
Sbjct: 267 SSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIR 326
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE------KPNLVLYNSVINGLCKEEXX 296
PD+VT G LI+ CK V+ A++V+E+M K + + +N++I+GLCK
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK---V 383
Query: 297 XXXXXXXXXXXXMNLFD-----VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHAT 351
M L + +TYN LI+GYC +GK++ A MK I N T
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVT 443
Query: 352 YNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV 411
NT++ +C+ + A M +G + +TY LI + + E+ + ++ M+
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 412 LKGVIPHKQTYKAVVSPLLQ 431
G P + Y A++S L Q
Sbjct: 504 EAGCSPDAKIYYALISGLCQ 523
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 147/350 (42%), Gaps = 85/350 (24%)
Query: 1 NVVIYALCKECKLLEAMSVFYR-SLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
N +I LCK +L EA + R L+ PN VT+N +ID C+ G ++ A +VVS+M+
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMA---------EKLK----------------- 93
I+P+ +T N ++GG C+ L MA E +K
Sbjct: 434 E---DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 94 ---------NEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRL----------------- 127
+M+E P+ + Y LI G + R +A R+
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 128 ------CD------------EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDN 169
CD +M K+G +S+ YNT+I + D E V ++ M ++
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 170 RIPPDKFTYSILTKGLCRNGNVNEAFKF------HSKILENNLIEDAFSHNILINYLCRS 223
+ P TY + C G ++EA K HSK+ N +I +NILIN +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI-----YNILINAFSKL 665
Query: 224 NNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
N A L M ++ + P++ T+ +L ++ E +++ ++M++
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 4/203 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I LC+ + +A+ V + + G +++ +NM+I + C A KV + M
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN---AEKVYEMLTDME 573
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
+PDSITYN LI F K E++ +M E + P V TY +ID Y L+
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 123 EAFRLCDEM-MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
EA +L +M + + N+VIYN +I+ G+ L M + P+ TY+ L
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 182 TKGLCRNGNVNEAFKFHSKILEN 204
K L K +++E+
Sbjct: 694 FKCLNEKTQGETLLKLMDEMVEH 716
>AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23967 Blast hits to 5877 proteins in 185 species: Archae
- 3; Bacteria - 26; Metazoa - 708; Fungi - 595; Plants -
21695; Viruses - 0; Other Eukaryotes - 940 (source: NCBI
BLink). | chr1:4669784-4672826 REVERSE
Length = 806
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 211/437 (48%), Gaps = 46/437 (10%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLA----LKVVS 56
+ V+ LC++ KL +A+ S I P+VV+FN I+ CK+G +D+A V+
Sbjct: 191 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK 250
Query: 57 KMEVMSVYS----------------------------IRPDSITYNCLIGGFCKMGKLTM 88
V SVYS + PDS+TYN L GF +G ++
Sbjct: 251 CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV-I 147
A ++ +M++K + P+V TY L+ G + +++ L +M+ +G +NS+I +V +
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 148 HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI 207
L G ++ L + M + + PD YSI+ GLC+ G + A + ++ + ++
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 208 EDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQV 267
++ +H L+ LC+ L A+ LL S+ G DIV + +IDG+ K G +E A+++
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 268 YEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCN 326
++ ++++G P++ +NS+I G CK + L V++Y TL++ Y N
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 327 SGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK------LGHI------QQAKELMKV 374
G MK GI + TY+ + LC+ H+ ++ K+ ++
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 610
Query: 375 MILQGFVPDYITYTILI 391
M +G PD ITY +I
Sbjct: 611 MESEGIPPDQITYNTII 627
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 205/432 (47%), Gaps = 19/432 (4%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM--EVMSVYSIRPDSITY 73
A V L G+ P+V+T+ +++ C++G +D+ L ++ M + SI P S+
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV-- 368
Query: 74 NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK 133
++ G CK G++ A L N+M + P++ Y+ +I G + + A L DEM
Sbjct: 369 --MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 134 KGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNE 193
K ++ NS + ++ L +G + L+ S++ + D Y+I+ G ++G + E
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 194 AFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLID 253
A + ++E + + N LI C++ N++ A+++L + + GL P +V++ +L+D
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 254 GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXM 309
+ GN ++ ++ +M G P V Y+ + GLC+ E
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 310 NLFDV---------ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
L D+ ITYNT+I C + AF F MK+ + A+ ATYN LI+ LC
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
G+I++A + + Q YT LI + K PE +KL ++ +G +
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726
Query: 421 TYKAVVSPLLQE 432
Y AV++ L +
Sbjct: 727 DYSAVINRLCRR 738
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 191/425 (44%), Gaps = 26/425 (6%)
Query: 1 NVVIYA--LCKECKLLE---AMSVFYRSLKHGIWPN-VVTFNMIIDVACKMGAMDLALKV 54
+V+ Y LC +C+L + + L G N ++ ++++ CK G +D AL +
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 55 VSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDG 114
++M+ + PD + Y+ +I G CK+GK MA L +EM +K I+PN RT+ L+ G
Sbjct: 386 FNQMKA---DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 115 YSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPD 174
+ L EA L D ++ G ++ V+YN VI G +E L +++ I P
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 175 KFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLA 234
T++ L G C+ N+ EA K I L S+ L++ N +L
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEGNVENA-----VQVYEK-------MMKSGEKPNLVL 282
M G+ P VT+ + G C+ EN +++EK M G P+ +
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 283 YNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMK 341
YN++I LC+ + NL TYN LI+ C G I +A +F ++++
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
Query: 342 NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK---- 397
++ + Y TLI C G + A +L ++ +GF Y+ +I ++
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
Query: 398 CSPEE 402
C P +
Sbjct: 743 CFPGQ 747
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 201/401 (50%), Gaps = 13/401 (3%)
Query: 29 WPNV-VTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLT 87
W + + ++M++ ++ ++ +D +L ++ KM+ + + + +YN ++ F + K+
Sbjct: 120 WESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQN---LNVSTQSYNSVLYHFRETDKMW 176
Query: 88 MAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVI 147
K E+ +K N TY+T++DG R + LE+A K + + V +N+++
Sbjct: 177 DVYK---EIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM 229
Query: 148 HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI 207
G ++ +++ + P ++++IL GLC G++ EA + S + ++ +
Sbjct: 230 SGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 289
Query: 208 EDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQV 267
D+ ++NIL +SGA +++ M +GL PD++T+ L+ G C+ GN++ + +
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349
Query: 268 YEKMMKSGEKPNLVLYNSV-INGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYC 325
+ M+ G + N ++ SV ++GLCK L D++ Y+ +I+G C
Sbjct: 350 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
GK D A M + I N T+ L+ LC+ G + +A+ L+ +I G D +
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
Y I+I ++K EE ++L ++ G+ P T+ +++
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 222/501 (44%), Gaps = 79/501 (15%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I LCK KL EA +F R L GI + + +ID C+ G ++ A ++ ME
Sbjct: 318 IIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRG 377
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
I+P +TYN +I G C G+++ A+++ K +V +V TY+TL+D Y + ++++
Sbjct: 378 ---IQPSILTYNTVINGLCMAGRVSEADEVS-----KGVVGDVITYSTLLDSYIKVQNID 429
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+ ++ + M+ V+ N ++ + G L +M + + PD TY+ +
Sbjct: 430 AVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMI 489
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
KG C+ G + EA + ++ L + + A +N +I+ LC+ L A ++L ++ +GL
Sbjct: 490 KGYCKTGQIEEALEMFNE-LRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLY 548
Query: 243 PDI--------------------------------VTFGSLIDG---HCKEGNVENAVQV 267
DI V G L D CK G+ E A++V
Sbjct: 549 LDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEV 608
Query: 268 YEKMMKSGEK---PNLVL-------------------------------YNSVINGLCKE 293
Y M + G P+ +L Y +INGLCKE
Sbjct: 609 YMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKE 668
Query: 294 EXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
+ + ITYN+LING C G + EA +++N G+ + TY
Sbjct: 669 GFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTY 728
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVL 412
LI+ LCK G A++L+ M+ +G VP+ I Y ++ + K E+ +++ ++
Sbjct: 729 GILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMM 788
Query: 413 KGVIPHKQTYKAVVSPLLQEG 433
V P T +++ ++G
Sbjct: 789 GRVTPDAFTVSSMIKGYCKKG 809
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 219/496 (44%), Gaps = 79/496 (15%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLAL-------- 52
+++I L KE + EA+ + + +K G+ PN++T+ II CKMG ++ A
Sbjct: 281 SILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILS 340
Query: 53 ------------------------KVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
+ S + M I+P +TYN +I G C G+++
Sbjct: 341 VGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSE 400
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A+++ K +V +V TY+TL+D Y + ++++ + ++ + M+ V+ N ++
Sbjct: 401 ADEVS-----KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLK 455
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
+ G L +M + + PD TY+ + KG C+ G + EA + ++ L + +
Sbjct: 456 AFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE-LRKSSVS 514
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI----------------------- 245
A +N +I+ LC+ L A ++L ++ +GL DI
Sbjct: 515 AAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLV 574
Query: 246 ---------VTFGSLIDG---HCKEGNVENAVQVYEKMMKSGEK---PNLVLYNSVINGL 290
V G L D CK G+ E A++VY M + G P+ +L V N
Sbjct: 575 YGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLR 634
Query: 291 CKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHA 350
+ M DVI Y +ING C G + +A K+ G+ N
Sbjct: 635 SLDAYLLVVNAGETTLSSM---DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTI 691
Query: 351 TYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYM 410
TYN+LIN LC+ G + +A L + G VP +TY ILI + K+ + KL D M
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 411 VLKGVIPHKQTYKAVV 426
V KG++P+ Y ++V
Sbjct: 752 VSKGLVPNIIIYNSIV 767
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 184/391 (47%), Gaps = 42/391 (10%)
Query: 38 IIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLT----MAEKLK 93
+I CK+G +LAL V + P+ +TY L+ C++GK+ + +L+
Sbjct: 177 VISGFCKIGKPELALGFFESAVDSGV--LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 94 NEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
+E E D V Y+ I GY + +L +A EM++KG+ + V Y+ +I L E
Sbjct: 235 DEGFEFDCV----FYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKE 290
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
G++E L+ M+ + P+ TY+ + +GLC+ G + EAF ++IL + D F +
Sbjct: 291 GNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY 350
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEG-------------- 259
LI+ +CR NL+ A +L M RG+ P I+T+ ++I+G C G
Sbjct: 351 VTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG 410
Query: 260 ----------------NVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
N++ +++ + +++ +LV+ N ++
Sbjct: 411 DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALY 470
Query: 304 XXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKL 362
M+L D TY T+I GYC +G+I+EA ++ + ++A YN +I+ LCK
Sbjct: 471 RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKK 529
Query: 363 GHIQQAKELMKVMILQGFVPDYITYTILITS 393
G + A E++ + +G D T L+ S
Sbjct: 530 GMLDTATEVLIELWEKGLYLDIHTSRTLLHS 560
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 180/398 (45%), Gaps = 46/398 (11%)
Query: 20 FYRSLKH-GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIG 78
YR++ + P+ T+ +I CK G ++ AL++ +++ SV + ++ YN +I
Sbjct: 469 LYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA----AVCYNRIID 524
Query: 79 GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDG------------------------ 114
CK G L A ++ E+ EK + ++ T TL+
Sbjct: 525 ALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDV 584
Query: 115 -----------YSRARSLEEAFRLCDEMMKKGLVMN--SVIYNTVIHWLYVEGDMEGVSL 161
+ S E A + M +KGL + S I T++ L ++ L
Sbjct: 585 CLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLR---SLDAYLL 641
Query: 162 LISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLC 221
++++ D Y+I+ GLC+ G + +A S + + ++N LIN LC
Sbjct: 642 VVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLC 701
Query: 222 RSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLV 281
+ L A +L S+ GLVP VT+G LID CKEG +A ++ + M+ G PN++
Sbjct: 702 QQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNII 761
Query: 282 LYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAM 340
+YNS+++G CK + D T +++I GYC G ++EA +
Sbjct: 762 IYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEF 821
Query: 341 KNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
K+ I+A+ + LI C G +++A+ L++ M++
Sbjct: 822 KDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVS 859
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 203/484 (41%), Gaps = 83/484 (17%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSK-ME 59
N VI LC ++ EA V G+ +V+T++ ++D K+ +D L++ + +E
Sbjct: 386 NTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLE 440
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
I D + N L+ F MG A+ L M E D+ P+ TYAT+I GY +
Sbjct: 441 A----KIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTG 496
Query: 120 SLEEAFRLCDEMMK----------------------------------KGLVMNSVIYNT 145
+EEA + +E+ K KGL ++ T
Sbjct: 497 QIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRT 556
Query: 146 VIHWLYVEGDMEGVSLLISSM--VDNRIPPDKFTYSILTKGLCRNGNVNEAFK------- 196
++H ++ G +G+ L+ + +++ + +IL LC+ G+ A +
Sbjct: 557 LLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILL--LCKRGSFEAAIEVYMIMRR 614
Query: 197 ------FHSKILE---NNLIE------------------DAFSHNILINYLCRSNNLSGA 229
F S IL+ +NL D + I+IN LC+ L A
Sbjct: 615 KGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKA 674
Query: 230 KQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING 289
L + RG+ + +T+ SLI+G C++G + A+++++ + G P+ V Y +I+
Sbjct: 675 LNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDN 734
Query: 290 LCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAAN 348
LCKE L ++I YN++++GYC G+ ++A + +
Sbjct: 735 LCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPD 794
Query: 349 HATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHD 408
T +++I CK G +++A + + D+ + LI F K EE L
Sbjct: 795 AFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLR 854
Query: 409 YMVL 412
M++
Sbjct: 855 EMLV 858
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 30/322 (9%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
+V+ + +II+ CK G + AL + S + V ++ITYN LI G C+ G L A
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGV---TLNTITYNSLINGLCQQGCLVEAL 710
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
+L + + +VP+ TY LID + +A +L D M+ KGLV N +IYN+++
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 770
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
G E ++S + R+ PD FT S + KG C+ G++ EA ++ + N+ D
Sbjct: 771 CKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADF 830
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT------------FGSLIDGHCKE 258
F LI C + A+ LL M V V ++ G L++ C++
Sbjct: 831 FGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVE-LCEQ 889
Query: 259 GNVENAVQVYEKMMKS--GEKPNLVLYNSV--INGLCKEEXXXXXXXXXXXXXXMNLFDV 314
G V A+++ +++ + NL Y + +N + +EE + D
Sbjct: 890 GRVPQAIKILDEISSTIYPSGKNLGSYQRLQFLNDVNEEEIKKKDY----------VHDF 939
Query: 315 ITYNTLINGYCNSGKIDEAFAF 336
+ ++ ++ C SGK+++A F
Sbjct: 940 HSLHSTVSSLCTSGKLEQANEF 961
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 178/417 (42%), Gaps = 52/417 (12%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV------- 55
+I CK ++ EA+ +F L+ V +N IID CK G +D A +V+
Sbjct: 488 MIKGYCKTGQIEEALEMF-NELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKG 546
Query: 56 -------SKMEVMSVYSIRPD----SITYN--------CL------IGGFCKMGKLTMAE 90
S+ + S+++ D + Y CL I CK G A
Sbjct: 547 LYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAI 606
Query: 91 KLKNEMMEKDIVPNVRT--YATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
++ M K + + TL+D RSL+ + + M+ + Y +I+
Sbjct: 607 EVYMIMRRKGLTVTFPSTILKTLVDNL---RSLDAYLLVVNAGETTLSSMDVIDYTIIIN 663
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
L EG + L S + + TY+ L GLC+ G + EA + + L+
Sbjct: 664 GLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVP 723
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
++ ILI+ LC+ A++LL SM +GLVP+I+ + S++DG+CK G E+A++V
Sbjct: 724 SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVV 783
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNS 327
+ M P+ +S+I G CK+ N+ D + LI G+C
Sbjct: 784 SRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTK 843
Query: 328 GKIDEAFAFSFAM------------KNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
G+++EA M +A +A + + L+ LC+ G + QA +++
Sbjct: 844 GRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVE-LCEQGRVPQAIKIL 899
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 170/416 (40%), Gaps = 43/416 (10%)
Query: 24 LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
LK G P + + + + ++ + L+ S+++ I + Y+ + F +
Sbjct: 18 LKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQ---ININHRIYSIVSWAFLNL 74
Query: 84 GKLTMAEKLKNEMMEK-DIVPNVRTYATLIDGYSRARS--LEEAFRLCDEMMKKGLVMNS 140
+ AEK N + K I P +LI G+S R + L D + G +S
Sbjct: 75 NRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSS 134
Query: 141 VIYNTVIHWLYVEGDMEGVSLLISSMVDNRI--PPDKFTYSILTKGLCRNGNVNEAFKFH 198
+ + ++I+ +G+M+ ++ M + + P D F S + G C+ G A F
Sbjct: 135 LTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFF 194
Query: 199 SKILENN-LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK 257
+++ L+ + ++ L++ LC+ + + L+ + G D V + + I G+ K
Sbjct: 195 ESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFK 254
Query: 258 EGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITY 317
G + +A+ +M++ G MN DV++Y
Sbjct: 255 GGALVDALMQDREMVEKG---------------------------------MNR-DVVSY 280
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
+ LI+G G ++EA M G+ N TY +I LCK+G +++A L ++
Sbjct: 281 SILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILS 340
Query: 378 QGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
G D Y LI +K + + M +G+ P TY V++ L G
Sbjct: 341 VGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 196/399 (49%), Gaps = 4/399 (1%)
Query: 20 FYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGG 79
F+ K + +V +F ++I C+ G ++ + ++ ++ + + P+ + Y LI G
Sbjct: 151 FFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIEL---TEFGFSPNVVIYTTLIDG 207
Query: 80 FCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMN 139
CK G++ A+ L EM + +V N RTY LI+G + ++ F + ++M + G+ N
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267
Query: 140 SVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHS 199
YN V++ L +G + + M + + + TY+ L GLCR +NEA K
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 200 KILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEG 259
++ + + + ++N LI+ C L A L + RGL P +VT+ L+ G C++G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 260 NVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYN 318
+ A ++ ++M + G KP+ V Y +I+ + + + L DV TY+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 319 TLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
LI+G+C G+++EA +M N YNT+I CK G +A +L+K M +
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Query: 379 GFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
P+ +Y +I K+ +E +L + M+ G+ P
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 183/387 (47%), Gaps = 42/387 (10%)
Query: 1 NVVIY-----ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
NVVIY CK+ ++ +A +F+ K G+ N T+ ++I+ K G ++
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY 256
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
KM+ V+ P+ TYNC++ CK G+ A ++ +EM E+ + N+ TY TLI G
Sbjct: 257 EKMQEDGVF---PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
R L EA ++ D+M G+ N + YNT+I G + L + + P
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
TY+IL G CR G+ + A K ++ E + ++ ILI+ RS+N+ A QL S
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
M GLVPD+ T+ LI G C +G + A ++++ M++ +PN V+YN++I G CKE
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE-- 491
Query: 296 XXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTL 355
G A M+ +A N A+Y +
Sbjct: 492 --------------------------------GSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 356 INFLCKLGHIQQAKELMKVMILQGFVP 382
I LCK ++A+ L++ MI G P
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 208/435 (47%), Gaps = 11/435 (2%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME-- 59
V+I + + L ++S F + +G P FN ++ + + ++ +
Sbjct: 99 VIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK 158
Query: 60 -VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRA 118
V+ VYS + LI G C+ G++ + L E+ E PNV Y TLIDG +
Sbjct: 159 VVLDVYS-------FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKK 211
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
+E+A L EM K GLV N Y +I+ L+ G + + M ++ + P+ +TY
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ + LC++G +AF+ ++ E + + ++N LI LCR L+ A +++ M
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXX 298
G+ P+++T+ +LIDG C G + A+ + + G P+LV YN +++G C++
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 299 XXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
+ +TY LI+ + S +++A +M+ G+ + TY+ LI+
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
C G + +A L K M+ + P+ + Y +I + K+ S +KL M K + P
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP 511
Query: 418 HKQTYKAVVSPLLQE 432
+ +Y+ ++ L +E
Sbjct: 512 NVASYRYMIEVLCKE 526
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 166/334 (49%), Gaps = 1/334 (0%)
Query: 101 IVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVS 160
+V +V ++ LI G A +E++F L E+ + G N VIY T+I +G++E
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 161 LLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYL 220
L M + ++ TY++L GL +NG + F+ + K+ E+ + + +++N ++N L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 221 CRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNL 280
C+ A Q+ M RG+ +IVT+ +LI G C+E + A +V ++M G PNL
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 281 VLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFA 339
+ YN++I+G C L ++TYN L++G+C G A
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 340 MKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCS 399
M+ GI + TY LI+ + ++++A +L M G VPD TY++LI F K
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 400 PEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
E +L MV K P++ Y ++ +EG
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 155/322 (48%), Gaps = 2/322 (0%)
Query: 106 RTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISS 165
R Y +I+ Y +++SL + +EM+ G V S +N ++ ++ +
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 166 MVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNN 225
+++ D +++ IL KG C G + ++F ++ E + + LI+ C+
Sbjct: 155 N-KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 226 LSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNS 285
+ AK L M GLV + T+ LI+G K G + ++YEKM + G PNL YN
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 286 VINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAG 344
V+N LCK+ + +++TYNTLI G C K++EA MK+ G
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333
Query: 345 IAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVI 404
I N TYNTLI+ C +G + +A L + + +G P +TY IL++ F +K
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 405 KLHDYMVLKGVIPHKQTYKAVV 426
K+ M +G+ P K TY ++
Sbjct: 394 KMVKEMEERGIKPSKVTYTILI 415
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 145/279 (51%), Gaps = 3/279 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N V+ LCK+ + +A VF + G+ N+VT+N +I C+ ++ A KVV +M+
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
I P+ ITYN LI GFC +GKL A L ++ + + P++ TY L+ G+ R
Sbjct: 332 DG---INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
A ++ EM ++G+ + V Y +I +ME L SM + + PD TYS+
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C G +NEA + ++E N + +N +I C+ + A +LL M +
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPN 279
L P++ ++ +I+ CKE + A ++ EKM+ SG P+
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 3/184 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ C++ A + + GI P+ VT+ ++ID + M+ A+++ ME
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ + PD TY+ LI GFC G++ A +L M+EK+ PN Y T+I GY + S
Sbjct: 437 LGLV---PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
A +L EM +K L N Y +I L E + L+ M+D+ I P S+
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSL 553
Query: 181 LTKG 184
+++
Sbjct: 554 ISRA 557
>AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR)
DOMAIN PROTEIN 40) | chr3:5768401-5770380 REVERSE
Length = 659
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 201/461 (43%), Gaps = 39/461 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N VI AL K L A F + G P+ T+N++I CK G +D A+++V +ME
Sbjct: 184 NAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQ 243
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
RP+ TY LI GF G++ A K M + + PN T T + G R
Sbjct: 244 EGN---RPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLP 300
Query: 121 LEEAFRLCDEMMKK-----------------------------------GLVMNSVIYNT 145
+AF + M+K G + +S +N
Sbjct: 301 PCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNA 360
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
+ L D+ + V + P Y +L + L +E ++ ++ +
Sbjct: 361 AMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDG 420
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
L+ +S+N +I+ LC++ + A L M RG+ P++VTF + + G+ G+V+
Sbjct: 421 LLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVH 480
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGY 324
V EK++ G KP+++ ++ +IN LC+ + + + ITYN LI
Sbjct: 481 GVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSC 540
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
C++G D + MK G++ + YN I CK+ +++A+EL+K M+ G PD
Sbjct: 541 CSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDN 600
Query: 385 ITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
TY+ LI + S+ E ++ + G +P T + V
Sbjct: 601 FTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 185/448 (41%), Gaps = 43/448 (9%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
G+ P+ +N +ID K ++DLA K + M +PD TYN LI G CK G +
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLA---YLKFQQMRSDGCKPDRFTYNILIHGVCKKGVV 231
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
A +L +M ++ PNV TY LIDG+ A ++EA + + M + L N T
Sbjct: 232 DEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTF 291
Query: 147 IHWLY-VEGDMEGVSLLISSM-VDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
+H ++ + +L+ M D+ + + Y + L N E +F KI E
Sbjct: 292 VHGIFRCLPPCKAFEVLVGFMEKDSNL--QRVGYDAVLYCLSNNSMAKETGQFLRKIGER 349
Query: 205 NLIEDAFSHN-----------------------------------ILINYLCRSNNLSGA 229
I D+ + N +L+ L + S
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 230 KQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING 289
+ L M V GL+ + ++ ++ID CK +ENA +M G PNLV +N+ ++G
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 290 LCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAAN 348
DVIT++ +IN C + +I +AF M GI N
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 349 HATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHD 408
TYN LI C G ++ +L M G PD Y I SF K ++ +L
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 409 YMVLKGVIPHKQTYKAVVSPLLQEGVET 436
M+ G+ P TY ++ L + G E+
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRES 617
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 164/377 (43%), Gaps = 7/377 (1%)
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+S ++P + YN +I K L +A +M P+ TY LI G +
Sbjct: 171 ISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGV 230
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++EA RL +M ++G N Y +I + G ++ + M ++ P++ T
Sbjct: 231 VDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRT 290
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK---QLLASMY 237
G+ R +AF+ +E + ++ ++ C SNN S AK Q L +
Sbjct: 291 FVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVL--YCLSNN-SMAKETGQFLRKIG 347
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
RG +PD TF + + K ++ ++++ + G KP Y ++ L +
Sbjct: 348 ERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFS 407
Query: 298 XXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
L V +YN +I+ C + +I+ A F M++ GI+ N T+NT +
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
+ G +++ +++ +++ GF PD IT++++I + ++ M+ G+
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 417 PHKQTYKAVVSPLLQEG 433
P++ TY ++ G
Sbjct: 528 PNEITYNILIRSCCSTG 544
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 3/227 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N VI LCK ++ A GI PN+VTFN + G + KV +E
Sbjct: 429 NAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVK---KVHGVLEK 485
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ V+ +PD IT++ +I C+ ++ A EM+E I PN TY LI
Sbjct: 486 LLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGD 545
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ + +L +M + GL + YN I ++ L+ +M+ + PD FTYS
Sbjct: 546 TDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYST 605
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLS 227
L K L +G +EA + S I + + D+++ ++ R + LS
Sbjct: 606 LIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLRKSGLS 652
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 182/375 (48%), Gaps = 38/375 (10%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ L K ++ +AM +F L+ + TFN++I C +G + AL+++ V
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLG---V 231
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIV-PNVRTYATLIDGYSRAR 119
MS + PD +TYN LI GFCK +L A ++ ++ + P+V TY ++I GY +A
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+ EA L D+M++ G+ +V +N ++ G+M + M+ PD T++
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L G CR G V++ F+ ++ + +AF+++ILIN LC N L A++LL + +
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
++P + +IDG CK G V A + E+M K KP
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP--------------------- 450
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
D IT+ LI G+C G++ EA + M G + + T ++L++ L
Sbjct: 451 -------------DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Query: 360 CKLGHIQQAKELMKV 374
K G ++A L ++
Sbjct: 498 LKAGMAKEAYHLNQI 512
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 194/420 (46%), Gaps = 11/420 (2%)
Query: 17 MSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCL 76
S F +++H W T+N++ CK G DLA ++ E M + P++ L
Sbjct: 92 FSRFKLNIRHSFW----TYNLLTRSLCKAGLHDLAGQM---FECMKSDGVSPNNRLLGFL 144
Query: 77 IGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGL 136
+ F + GKL A L + E + V +L++ + +E+A +L DE ++
Sbjct: 145 VSSFAEKGKLHFATALLLQSFEVEGCCMV--VNSLLNTLVKLDRVEDAMKLFDEHLRFQS 202
Query: 137 VMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFK 196
++ +N +I L G E L+ M PD TY+ L +G C++ +N+A +
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE 262
Query: 197 FHSKILENNLIE-DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGH 255
+ ++ D ++ +I+ C++ + A LL M G+ P VTF L+DG+
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 256 CKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DV 314
K G + A ++ KM+ G P++V + S+I+G C+ +F +
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
TY+ LIN CN ++ +A + + I YN +I+ CK G + +A +++
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 375 MILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
M + PD IT+TILI K E + + MV G P K T +++S LL+ G+
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGM 502
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 182/375 (48%), Gaps = 38/375 (10%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ L K ++ +AM +F L+ + TFN++I C +G + AL+++ V
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLG---V 231
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIV-PNVRTYATLIDGYSRAR 119
MS + PD +TYN LI GFCK +L A ++ ++ + P+V TY ++I GY +A
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+ EA L D+M++ G+ +V +N ++ G+M + M+ PD T++
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L G CR G V++ F+ ++ + +AF+++ILIN LC N L A++LL + +
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
++P + +IDG CK G V A + E+M K KP
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP--------------------- 450
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
D IT+ LI G+C G++ EA + M G + + T ++L++ L
Sbjct: 451 -------------DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Query: 360 CKLGHIQQAKELMKV 374
K G ++A L ++
Sbjct: 498 LKAGMAKEAYHLNQI 512
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 194/420 (46%), Gaps = 11/420 (2%)
Query: 17 MSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCL 76
S F +++H W T+N++ CK G DLA ++ E M + P++ L
Sbjct: 92 FSRFKLNIRHSFW----TYNLLTRSLCKAGLHDLAGQM---FECMKSDGVSPNNRLLGFL 144
Query: 77 IGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGL 136
+ F + GKL A L + E + V +L++ + +E+A +L DE ++
Sbjct: 145 VSSFAEKGKLHFATALLLQSFEVEGCCMV--VNSLLNTLVKLDRVEDAMKLFDEHLRFQS 202
Query: 137 VMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFK 196
++ +N +I L G E L+ M PD TY+ L +G C++ +N+A +
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE 262
Query: 197 FHSKILENNLIE-DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGH 255
+ ++ D ++ +I+ C++ + A LL M G+ P VTF L+DG+
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 256 CKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DV 314
K G + A ++ KM+ G P++V + S+I+G C+ +F +
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
TY+ LIN CN ++ +A + + I YN +I+ CK G + +A +++
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 375 MILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
M + PD IT+TILI K E + + MV G P K T +++S LL+ G+
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGM 502
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 185/381 (48%), Gaps = 7/381 (1%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
EA+ +F ++ P+++ F +++V KM D+ + + +++M V D T N
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSH---DLYTCN 111
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
L+ FC+ + +A +MM+ P++ T+ +LI+G+ +EEA + ++M++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
G+ + V+Y T+I L G + L M + I PD Y+ L GLC +G +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
+ + + D + N LI+ + A++L M + P+I T+ SLI+G
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-D 313
C EG V+ A Q++ M G P++V Y S+ING CK + L +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 314 VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK---E 370
ITY TLI G+ GK + A M + G+ N TYN L++ LC G +++A E
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 371 LMKVMILQGFVPDYITYTILI 391
M+ + G P+ TY +L+
Sbjct: 412 DMQKREMDGVAPNIWTYNVLL 432
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 192/419 (45%), Gaps = 7/419 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ C+ + A S + +K G P++VTF +I+ C M+ A+ +V++M
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M I+PD + Y +I CK G + A L ++M I P+V Y +L++G +
Sbjct: 171 MG---IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+A L M K+ + + + +N +I EG L + M+ I P+ FTY+
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C G V+EA + + D ++ LIN C+ + A ++ M +G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L + +T+ +LI G + G A +V+ M+ G PN+ YN +++ LC
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 301 XXXXXXXXMNL----FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
+ ++ TYN L++G C +GK+++A M+ + TY +I
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
+CK G ++ A L + +G P+ +TYT +I+ ++ E L M GV
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 173/383 (45%), Gaps = 42/383 (10%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I C ++ EAMS+ + ++ GI P+VV + IID CK G ++ AL + +ME
Sbjct: 148 LINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN-- 205
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
Y IRPD + Y L+ G C G+ A+ L M ++ I P+V T+ LID + +
Sbjct: 206 -YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+A L +EM++ + N Y ++I+ +EG ++ + M PD Y+ L
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
G C+ V++A K ++ + L + ++ LI + + A+++ + M RG+
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMK---SGEKPNLVLYNSVINGLC-------- 291
P+I T+ L+ C G V+ A+ ++E M K G PN+ YN +++GLC
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 292 --------KEEXXXXXXXXXXXXXXM----------NLF----------DVITYNTLING 323
K E M NLF +V+TY T+I+G
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Query: 324 YCNSGKIDEAFAFSFAMKNAGIA 346
G EA MK G++
Sbjct: 505 LFREGLKHEAHVLFRKMKEDGVS 527
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 5/252 (1%)
Query: 187 RNG----NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
RNG NEA + ++E+ + L+N + + L + + G+
Sbjct: 45 RNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVS 104
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
D+ T L++ C+ A KMMK G +P++V + S+ING C
Sbjct: 105 HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 303 XXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
M + DV+ Y T+I+ C +G ++ A + M+N GI + Y +L+N LC
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQT 421
G + A L++ M + PD IT+ LI +F K+ + +L++ M+ + P+ T
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 422 YKAVVSPLLQEG 433
Y ++++ EG
Sbjct: 285 YTSLINGFCMEG 296
>AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18097048-18099027 FORWARD
Length = 659
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 205/424 (48%), Gaps = 12/424 (2%)
Query: 14 LEAMSVFYRSLKH-GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSIT 72
++ + + YR +K G PNV T+N+++ CK +D A K++ +M S PD+++
Sbjct: 162 IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM---SNKGCCPDAVS 218
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
Y +I C++G + K E+ E+ P V Y LI+G + + AF L EM+
Sbjct: 219 YTTVISSMCEVGLV----KEGRELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMV 273
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
+KG+ N + Y+T+I+ L G +E ++ M+ P+ +T S L KG G
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333
Query: 193 EAFKFHSKILEN-NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
+A ++++ L + ++N L+ C N+ A + + M G P+I T+GSL
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
I+G K G+++ AV ++ KM+ SG PN+V+Y +++ LC+ N
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 312 F-DVITYNTLINGYCNSGKIDEAF-AFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
V T+N I G C++G++D A F + N TYN L++ L K I++A
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
L + + ++G TY L+ P ++L M++ G P + T ++
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 430 LQEG 433
++G
Sbjct: 574 CKQG 577
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 180/394 (45%), Gaps = 37/394 (9%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
N +I LCKE A + ++ GI PNV++++ +I+V C G ++LA +++M
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLK 309
Query: 59 -------------------------------EVMSVYSIRPDSITYNCLIGGFCKMGKLT 87
+++ + ++P+ + YN L+ GFC G +
Sbjct: 310 RGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIV 369
Query: 88 MAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVI 147
A + + M E PN+RTY +LI+G+++ SL+ A + ++M+ G N V+Y ++
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Query: 148 HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFK-FHSKILENNL 206
L + LI M P T++ KGLC G ++ A K F ++
Sbjct: 430 EALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
+ ++N L++ L ++N + A L +++RG+ T+ +L+ G C G A+Q
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKE---EXXXXXXXXXXXXXXMNLFDVITYNTLING 323
+ KMM G+ P+ + N +I CK+ E DVI+Y +I G
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWG 609
Query: 324 YCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
C S ++ M +AGI + AT++ LIN
Sbjct: 610 LCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 165/400 (41%), Gaps = 42/400 (10%)
Query: 36 NMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNE 95
++ I V + LA + V + + P YN ++ ++ M + +
Sbjct: 112 DLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRD 171
Query: 96 MMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGD 155
M PNV TY L+ + ++ A +L EM KG ++V Y TVI + G
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 156 M-EGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHN 214
+ EG L R P Y+ L GLC+ + AF+ +++E + + S++
Sbjct: 232 VKEGRELA------ERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
LIN LC S + A L M RG P+I T SL+ G G +A+ ++ +M++
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 275 -GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEA 333
G +PN V+ YNTL+ G+C+ G I +A
Sbjct: 346 FGLQPN----------------------------------VVAYNTLVQGFCSHGNIVKA 371
Query: 334 FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
+ M+ G + N TY +LIN K G + A + M+ G P+ + YT ++ +
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 394 FSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ +E L + M + P T+ A + L G
Sbjct: 432 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 471
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 199/408 (48%), Gaps = 6/408 (1%)
Query: 15 EAMSVFYRSLKH-GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITY 73
EA+ +R L+ GI ++ +F +ID C+ + LAL + KM + P +T+
Sbjct: 96 EAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLG---FEPSIVTF 152
Query: 74 NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK 133
L+ GFC + + A L ++++ PNV Y T+ID + A + M K
Sbjct: 153 GSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKK 212
Query: 134 KGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNE 193
G+ + V YN++I L+ G + ++S M+ I PD T+S L + G + E
Sbjct: 213 MGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLE 272
Query: 194 AFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLID 253
A K ++++++ ++ + ++N LIN LC L AK++L + +G P+ VT+ +LI+
Sbjct: 273 AKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLIN 332
Query: 254 GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF- 312
G+CK V++ +++ M + G + YN++ G C+ +
Sbjct: 333 GYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHP 392
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
D+ T+N L++G C+ GKI +A ++ + TYN +I LCK ++ A L
Sbjct: 393 DMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLF 452
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLK-GVIPHK 419
+ L+G PD ITY ++ +K E +L+ M + G++P K
Sbjct: 453 CSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMPIK 500
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 194/412 (47%), Gaps = 4/412 (0%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
K +A+++F + P++V F+ ++ K+ + + + +E++ I D
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLG---ISHDLY 115
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
++ LI FC+ +L++A +MM+ P++ T+ +L++G+ EA L D++
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
+ G N VIYNT+I L +G + ++ M I PD TY+ L L +G
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
+ + S ++ + D + + LI+ + L AK+ M R + P+IVT+ SL
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
I+G C G ++ A +V ++ G PN V YN++ING CK + +
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 312 -FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
D TYNTL GYC +GK A M + G+ + T+N L++ LC G I +A
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
++ + V ITY I+I K E+ L + LKGV P TY
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 166/322 (51%), Gaps = 4/322 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
++ C + EAMS+ + + G PNVV +N IID C+ G ++ AL V+ M+ M
Sbjct: 155 LVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG 214
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
IRPD +TYN LI G ++ ++ ++MM I P+V T++ LID Y + L
Sbjct: 215 ---IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
EA + +EM+++ + N V YN++I+ L + G ++ +++ +V P+ TY+ L
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
G C+ V++ K + + + D F++N L C++ S A+++L M G+
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
PD+ TF L+DG C G + A+ E + KS ++ YN +I GLCK +
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYL 451
Query: 303 XXXXXXMNLF-DVITYNTLING 323
+ DVITY T++ G
Sbjct: 452 FCSLALKGVSPDVITYITMMIG 473
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 157/294 (53%), Gaps = 3/294 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I +LC++ ++ A+ V K GI P+VVT+N +I G ++ +++S M
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR 247
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M I PD IT++ LI + K G+L A+K NEM+++ + PN+ TY +LI+G
Sbjct: 248 MG---ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL 304
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L+EA ++ + ++ KG N+V YNT+I+ ++ ++ M + + D FTY+
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L +G C+ G + A K +++ + D ++ NIL++ LC + A L +
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
V I+T+ +I G CK VE+A ++ + G P+++ Y +++ GL ++
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKR 478
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 1/264 (0%)
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
I D ++++ L CR ++ A K+++ + L+N C N A
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
L+ + G P++V + ++ID C++G V A+ V + M K G +P++V YNS+I L
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
Query: 291 CKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
M + DVIT++ LI+ Y G++ EA M + N
Sbjct: 230 FHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289
Query: 350 ATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDY 409
TYN+LIN LC G + +AK+++ V++ +GF P+ +TY LI + K ++ +K+
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCV 349
Query: 410 MVLKGVIPHKQTYKAVVSPLLQEG 433
M GV TY + Q G
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAG 373
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 1/244 (0%)
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
N+A + E++ + + L+ + + N L + + G+ D+ +F +L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
ID C+ + A+ KMMK G +P++V + S++NG C +
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 312 F-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
+V+ YNT+I+ C G+++ A MK GI + TYN+LI L G +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLL 430
++ M+ G PD IT++ LI + K+ E K ++ M+ + V P+ TY ++++ L
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 431 QEGV 434
G+
Sbjct: 301 IHGL 304
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 223/471 (47%), Gaps = 47/471 (9%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
++ CK +L +A+ +F R + G+ P+ V F+++++ CK M+ A++ +M+ +
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Query: 63 VYSIRPDSITYNCLIGG----------------------------------FCKMGKLTM 88
I P S+ + +I G FCK GK+
Sbjct: 411 ---IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDA 467
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A M +K I PNV Y ++ + R ++++ A + EM++KGL N+ Y+ +I
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
+ D + +I+ M + ++ Y+ + GLC+ G ++A ++L+N + E
Sbjct: 528 GFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA----KEMLQNLIKE 583
Query: 209 DAFS-----HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVEN 263
+S +N +I+ + + A + M G P++VTF SLI+G CK ++
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 643
Query: 264 AVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLIN 322
A+++ +M K +L Y ++I+G CK+ + L +V YN+LI+
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 323 GYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
G+ N GK+D A M N GI+ + TY T+I+ L K G+I A +L ++ G VP
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP 763
Query: 383 DYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
D I + +L+ SKK + K+ + M K V P+ Y V++ +EG
Sbjct: 764 DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREG 814
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 213/433 (49%), Gaps = 10/433 (2%)
Query: 1 NVVIYALCKECKLLE----AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVS 56
+V+++ + + C E A+ +F S + I + N I + CK G +D A S
Sbjct: 415 SVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAA---TS 470
Query: 57 KMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYS 116
+++M I P+ + YN ++ C+M + +A + +EM+EK + PN TY+ LIDG+
Sbjct: 471 FLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFF 530
Query: 117 RARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMV-DNRIPPDK 175
+ + + A+ + ++M N VIYNT+I+ L G ++ +++ + R
Sbjct: 531 KNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSC 590
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
+Y+ + G + G+ + A + + ++ EN + + LIN C+SN + A ++
Sbjct: 591 TSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHE 650
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
M L D+ +G+LIDG CK+ +++ A ++ ++ + G PN+ +YNS+I+G
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 296 XXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNT 354
+ D+ TY T+I+G G I+ A + + GI + +
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 355 LINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKG 414
L+N L K G +A ++++ M + P+ + Y+ +I ++ + E +LHD M+ KG
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Query: 415 VIPHKQTYKAVVS 427
++ + +VS
Sbjct: 831 IVHDDTVFNLLVS 843
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 159/290 (54%), Gaps = 4/290 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWP-NVVTFNMIIDVACKMGAMDLALKVVSKME 59
N +I LCK + +A + +K + + ++N IID K+G D A++ +M
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM- 616
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
S P+ +T+ LI GFCK ++ +A ++ +EM ++ ++ Y LIDG+ +
Sbjct: 617 --SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKN 674
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
++ A+ L E+ + GL+ N +YN++I G M+ L MV++ I D FTY+
Sbjct: 675 DMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYT 734
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ GL ++GN+N A +S++L+ ++ D H +L+N L + A ++L M +
Sbjct: 735 TMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK 794
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING 289
+ P+++ + ++I GH +EGN+ A +++++M++ G + ++N +++G
Sbjct: 795 DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 185/399 (46%), Gaps = 5/399 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N + CK+ K+ A S + GI PNVV +N ++ C+M MDLA + S+M
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM-- 510
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ P++ TY+ LI GF K A + N+M + N Y T+I+G +
Sbjct: 511 -LEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 121 LEEAFRLCDEMMK-KGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+A + ++K K M+ YN++I GD + M +N P+ T++
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L G C++ ++ A + ++ L D ++ LI+ C+ N++ A L + +
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
GL+P++ + SLI G G ++ A+ +Y+KM+ G +L Y ++I+GL K+
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 300 XXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
+ + D I + L+NG G+ +A MK + N Y+T+I
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK 397
+ G++ +A L M+ +G V D + +L++ +K
Sbjct: 810 HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 155/364 (42%), Gaps = 4/364 (1%)
Query: 34 TFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLK 93
FN +++ + MD A+ M V P N ++ + + A+++
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVP---YVNNVLSSLVRSNLIDEAKEIY 227
Query: 94 NEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
N+M+ + + T L+ R R EEA ++ +M +G + ++++ +
Sbjct: 228 NKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKT 287
Query: 154 GDMEGVSLLISSMVDN-RIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFS 212
D+ L+ M +P + TY+ + + GN+ EA + +++ + +
Sbjct: 288 PDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIA 347
Query: 213 HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMM 272
L+N C+ N L A L M GL PD V F +++ CK +E A++ Y +M
Sbjct: 348 ATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK 407
Query: 273 KSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDE 332
P+ VL +++I G K E + N + +C GK+D
Sbjct: 408 SVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDA 467
Query: 333 AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
A +F M+ GI N YN ++ C++ ++ A+ + M+ +G P+ TY+ILI
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Query: 393 SFSK 396
F K
Sbjct: 528 GFFK 531
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 207/469 (44%), Gaps = 41/469 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHG-IWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
N++I KE AM ++ R L+ ++PNV T N++I K G +D LK+ E
Sbjct: 223 NILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI---WE 279
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
M D TY+ LI G C G + AE + NE+ E+ +V TY T++ G+ R
Sbjct: 280 RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG 339
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
++E+ L M K V N V YN +I L G ++ +++ M DK TY
Sbjct: 340 KIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL------ 233
I GLC NG VN+A ++ + D +++ +I+ LC+ L A L+
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 234 ------------------------ASMYVR-----GLVPDIVTFGSLIDGHCKEGNVENA 264
AS ++R G P +V++ LI G CK G A
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 265 VQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLING 323
++M+++G KP+L Y+ ++ GLC++ L DV+ +N LI+G
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 324 YCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPD 383
C+ GK+D+A M++ AN TYNTL+ K+G +A + M G PD
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638
Query: 384 YITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
I+Y ++ ++ D G+ P T+ +V ++
Sbjct: 639 IISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 187/398 (46%), Gaps = 6/398 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+I CK+ + +A K G P+V +++ +I+ K G +D AL++ +M
Sbjct: 153 NVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM-- 210
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIV-PNVRTYATLIDGYSRAR 119
S + PD YN LI GF K A +L + ++E V PNV+T+ +I G S+
Sbjct: 211 -SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+++ ++ + M + + Y+++IH L G+++ + + + + + D TY+
Sbjct: 270 RVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ G CR G + E+ + +I+E+ + S+NILI L + + A + M +
Sbjct: 330 TMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK 388
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G D T+G I G C G V A+ V +++ SG ++ Y S+I+ LCK++
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 300 XXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
+ + N LI G ++ EA F M G +YN LI
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
LCK G +A +K M+ G+ PD TY+IL+ +
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR 546
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 173/385 (44%), Gaps = 3/385 (0%)
Query: 49 DLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTY 108
D AL V +M ++ P +YN L+ F + + E L + PN++TY
Sbjct: 95 DQALDVFKRMR--EIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTY 152
Query: 109 ATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVD 168
LI + + E+A D M K+G + Y+TVI+ L G ++ L M +
Sbjct: 153 NVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212
Query: 169 NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI-EDAFSHNILINYLCRSNNLS 227
+ PD Y+IL G + + A + ++LE++ + + +HNI+I+ L + +
Sbjct: 213 RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVD 272
Query: 228 GAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI 287
++ M D+ T+ SLI G C GNV+ A V+ ++ + ++V YN+++
Sbjct: 273 DCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML 332
Query: 288 NGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAA 347
G C+ N ++++YN LI G +GKIDEA M G AA
Sbjct: 333 GGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 348 NHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLH 407
+ TY I+ LC G++ +A +M+ + G D Y +I KK EE L
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 408 DYMVLKGVIPHKQTYKAVVSPLLQE 432
M GV + A++ L+++
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRD 477
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 140/293 (47%), Gaps = 3/293 (1%)
Query: 143 YNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKIL 202
YNT+++ V L + + P+ TY++L K C+ +A F +
Sbjct: 117 YNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW 176
Query: 203 ENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVE 262
+ D FS++ +IN L ++ L A +L M RG+ PD+ + LIDG KE + +
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 263 NAVQVYEKMMK-SGEKPNLVLYNSVINGLCK-EEXXXXXXXXXXXXXXMNLFDVITYNTL 320
A+++++++++ S PN+ +N +I+GL K D+ TY++L
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 321 INGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGF 380
I+G C++G +D+A + + + + TYNT++ C+ G I+++ EL ++M +
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS 356
Query: 381 VPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
V + ++Y ILI + +E + M KG K TY + L G
Sbjct: 357 V-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408
>AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15510901-15512691 FORWARD
Length = 596
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 171/356 (48%), Gaps = 5/356 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+++A K +A + + G++P++ T+N +I V CK AL V +ME
Sbjct: 207 NVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMER 266
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
V P+ +TYN I GF + G++ A +L E+ + D+ N TY TLIDGY R
Sbjct: 267 SGV---APNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMND 322
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++EA RL + M +G V YN+++ L +G + + L++ M +I PD T +
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L C+ ++ A K K++E+ L D +S+ LI+ C+ L AK+ L SM +G
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
P T+ L+DG + + ++ E+ K G ++ LY +I +CK E
Sbjct: 443 FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAK 502
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTL 355
L D + + T+ Y +GK+ EA A M N + N Y ++
Sbjct: 503 VLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 157/325 (48%), Gaps = 2/325 (0%)
Query: 103 PNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLL 162
P+++ L++ + R + +++ +M+K G+V N +YN ++H GD E L
Sbjct: 166 PHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKL 225
Query: 163 ISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR 222
+S M + + PD FTY+ L C+ EA ++ + + + ++N I+ R
Sbjct: 226 LSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSR 285
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVL 282
+ A +L + + + VT+ +LIDG+C+ +++ A+++ E M G P +V
Sbjct: 286 EGRMREATRLFREIK-DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT 344
Query: 283 YNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMK 341
YNS++ LC++ + D IT NTLIN YC + A M
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMI 404
Query: 342 NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
+G+ + +Y LI+ CK+ ++ AKE + MI +GF P Y TY+ L+ F + +
Sbjct: 405 ESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQD 464
Query: 402 EVIKLHDYMVLKGVIPHKQTYKAVV 426
E+ KL + +G+ Y+ ++
Sbjct: 465 EITKLLEEFEKRGLCADVALYRGLI 489
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 188/446 (42%), Gaps = 73/446 (16%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
+++ VF + G+ P++ ++++ K D K+ KM + V + + YN
Sbjct: 151 DSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVA---NIHVYN 207
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
L+ K G AEKL +EM EK + P++ TY TLI Y + EA + D M +
Sbjct: 208 VLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERS 267
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
G+ N V YN+ IH EG M + L + D+ + + TY+ L G CR +++EA
Sbjct: 268 GVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEA 326
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
+ + ++N ++ LC + A +LL M + + PD +T +LI+
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDV 314
+CK ++ +AV+V +KM++SG K D+
Sbjct: 387 YCKIEDMVSAVKVKKKMIESGLK----------------------------------LDM 412
Query: 315 ITYNTLINGYC-----------------------------------NSGKIDEAFAFSFA 339
+Y LI+G+C N K DE
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 340 MKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCS 399
+ G+ A+ A Y LI +CKL + AK L + M +G V D + +T + ++ +
Sbjct: 473 FEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Query: 400 PEEVIKLHDYMVLKGVIPHKQTYKAV 425
E L D M + ++ + + YK++
Sbjct: 533 VTEASALFDVMYNRRLMVNLKLYKSI 558
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 159/329 (48%), Gaps = 18/329 (5%)
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNT--------------VIHWL---YVEGDMEG 158
++ + + A +L D++ ++ L+ + ++ + V WL Y + M
Sbjct: 91 TKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMIN 150
Query: 159 VSLLISSMVDN-RIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILI 217
S+++ + + + P ++L L + + +K K+++ ++ + +N+L+
Sbjct: 151 DSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLV 210
Query: 218 NYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEK 277
+ +S + A++LL+ M +G+ PDI T+ +LI +CK+ A+ V ++M +SG
Sbjct: 211 HACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVA 270
Query: 278 PNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFS 337
PN+V YNS I+G +E + +TY TLI+GYC IDEA
Sbjct: 271 PNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLR 330
Query: 338 FAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK 397
M++ G + TYN+++ LC+ G I++A L+ M + PD IT LI ++ K
Sbjct: 331 EVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKI 390
Query: 398 CSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
+K+ M+ G+ +YKA++
Sbjct: 391 EDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 2/195 (1%)
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
GL P + L++ K+ + ++++KM+K G N+ +YN +++ K
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 300 XXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
+F D+ TYNTLI+ YC EA + M+ +G+A N TYN+ I+
Sbjct: 223 EKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHG 282
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
+ G +++A L + I +++TYT LI + + +E ++L + M +G P
Sbjct: 283 FSREGRMREATRLFR-EIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPG 341
Query: 419 KQTYKAVVSPLLQEG 433
TY +++ L ++G
Sbjct: 342 VVTYNSILRKLCEDG 356
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 38/233 (16%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ LC++ ++ EA + I P+ +T N +I+ CK+ M A+KV KM +
Sbjct: 346 NSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM-I 404
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S ++ D +Y LI GFCK+ +L A++ M+EK P TY+ L+DG+
Sbjct: 405 ES--GLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNK 462
Query: 121 LEEAFRLCDE-----------------------------------MMKKGLVMNSVIYNT 145
+E +L +E M KKGLV +SVI+ T
Sbjct: 463 QDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTT 522
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFH 198
+ + + G + S L M + R+ + Y ++ + +V F H
Sbjct: 523 MAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFFWSH 575
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 144/508 (28%), Positives = 215/508 (42%), Gaps = 79/508 (15%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +Y+L K + EA +FY G+ P+ VT+NM++ K+G +D A+K++S+M
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM-- 529
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
PD I N LI K ++ A K+ M E + P V TY TL+ G +
Sbjct: 530 -MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++EA L + M++KG N++ +NT+ L ++ ++ M+D PD FTY+
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 181 LTKGLCRNGNVNEAFKFHSK------------------ILENNLIEDAFS--HNILINYL 220
+ GL +NG V EA F + +++ +LIEDA+ N L N
Sbjct: 649 IIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCA 708
Query: 221 CRSNNLSGAKQLLASMYVRGLVPDIVTF-------GSLIDGH----------CKEGNVEN 263
+ NL + L+ S+ + + V+F G DG CK NV
Sbjct: 709 DQPANLF-WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSG 767
Query: 264 AVQVYEKMMKS-GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN-LFDVITYNTLI 321
A ++EK K G +P L YN +I GL + + + DV TYN L+
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 322 NGYCNSGKIDEAFAFSFAMKNAGIAAN--------------------------------- 348
+ Y SGKIDE F M AN
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 349 ---HATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIK 405
TY LI+ L K G + +AK+L + M+ G P+ Y ILI F K +
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 406 LHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
L MV +GV P +TY +V L G
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 197/430 (45%), Gaps = 4/430 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I+ L K EAM V+ R + G P++ T++ ++ K +D + ++ +ME
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ ++P+ T+ I + GK+ A ++ M ++ P+V TY LID AR
Sbjct: 252 LG---LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L+ A + ++M + V Y T++ D++ V S M + PD T++I
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L LC+ GN EAF + + ++ + ++N LI L R + L A +L +M G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ P T+ ID + K G+ +A++ +EKM G PN+V N+ + L K
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ L D +TYN ++ Y G+IDEA M G + N+LIN L
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
K + +A ++ M P +TY L+ K +E I+L + MV KG P+
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 608
Query: 420 QTYKAVVSPL 429
T+ + L
Sbjct: 609 ITFNTLFDCL 618
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 164/351 (46%), Gaps = 40/351 (11%)
Query: 10 ECKLLE-AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRP 68
E ++E A VF + G P+V T+N ++D K G +D ++ +M S +
Sbjct: 797 EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM---STHECEA 853
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMM-EKDIVPNVRTYATLIDGYSRARSLEEAFRL 127
++IT+N +I G K G + A L ++M ++D P TY LIDG S++ L EA +L
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 128 CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR 187
+ M+ G N IYN +I+ G+ + L MV + PD TYS+L LC
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV-RGLVPDIV 246
G V+E + ++ E+ L D +N++IN L +S+ L A L M RG+ PD+
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXX 306
T+ SLI G VE A ++Y ++ ++G +PN
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN--------------------------- 1066
Query: 307 XXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
V T+N LI GY SGK + A+A M G + N TY L N
Sbjct: 1067 -------VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 191/405 (47%), Gaps = 7/405 (1%)
Query: 14 LEAMSVFYRSL-KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSIT 72
L+++ F+ + K G P+VVTF +++D CK G A ++VM I P+ T
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT---LDVMRDQGILPNLHT 400
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
YN LI G ++ +L A +L M + P TY ID Y ++ A ++M
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
KG+ N V N ++ L G + + D + PD TY+++ K + G ++
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
EA K S+++EN D N LIN L +++ + A ++ M L P +VT+ +L+
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN-L 311
G K G ++ A++++E M++ G PN + +N++ + LCK + M +
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Query: 312 FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
DV TYNT+I G +G++ EA F MK + + T TL+ + K I+ A ++
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 372 MKVMILQ-GFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
+ + P + + LI S + + + + +V G+
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 164/363 (45%), Gaps = 36/363 (9%)
Query: 65 SIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEA 124
++P TYN LIGG + + +A+ + ++ +P+V TY L+D Y ++ ++E
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 125 FRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME-GVSLLISSMVDNRIPPDKFTYSILTK 183
F L EM N++ +N VI L G+++ + L M D P TY L
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
GL ++G + EA + +L+ + +NILIN ++ A L M G+ P
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
D+ T+ L+D C G V+ + ++++ +SG P++V YN +INGL K
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK----------- 1008
Query: 304 XXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNA-GIAANHATYNTLINFLCKL 362
S +++EA MK + GI + TYN+LI L
Sbjct: 1009 -----------------------SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045
Query: 363 GHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
G +++A ++ + G P+ T+ LI +S PE ++ MV G P+ TY
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Query: 423 KAV 425
+ +
Sbjct: 1106 EQL 1108
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 178/422 (42%), Gaps = 12/422 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME- 59
N ++ AL + KL E VF K I + T+ I G + A + KM
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 60 ---VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYS 116
V++ YS YN LI K T A ++ M+ + P+++TY++L+ G
Sbjct: 182 FGFVLNAYS-------YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLG 234
Query: 117 RARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKF 176
+ R ++ L EM GL N + I L G + ++ M D PD
Sbjct: 235 KRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVV 294
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
TY++L LC ++ A + K+ D ++ L++ + +L KQ + M
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXX 296
G VPD+VTF L+D CK GN A + M G PNL YN++I GL +
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 297 XXXXXXXXXXXXMNLFDVI-TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTL 355
+ + TY I+ Y SG A MK GIA N N
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 356 INFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
+ L K G ++AK++ + G VPD +TY +++ +SK +E IKL M+ G
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 416 IP 417
P
Sbjct: 535 EP 536
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 206/441 (46%), Gaps = 28/441 (6%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I+ L K ++ EAM F+ +K ++P+ VT ++ K ++ A K+++
Sbjct: 647 NTIIFGLVKNGQVKEAM-CFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF-- 703
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKL----TMAEKLKNEMMEKD----IVPNVRTYATLI 112
+ + +P ++ + LIG + + +E+L + +D +VP +R Y+
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR-YSCKH 762
Query: 113 DGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM----EGVSLLISSMVD 168
+ S AR+L E F G+ YN +I L +E DM + V L + S
Sbjct: 763 NNVSGARTLFEKF-----TKDLGVQPKLPTYNLLIGGL-LEADMIEIAQDVFLQVKS--- 813
Query: 169 NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSG 228
PD TY+ L ++G ++E F+ + ++ + + +HNI+I+ L ++ N+
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873
Query: 229 AKQLLAS-MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI 287
A L M R P T+G LIDG K G + A Q++E M+ G +PN +YN +I
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI 933
Query: 288 NGLCKE-EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIA 346
NG K E D+ TY+ L++ C G++DE + +K +G+
Sbjct: 934 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993
Query: 347 ANHATYNTLINFLCKLGHIQQAKELMKVM-ILQGFVPDYITYTILITSFSKKCSPEEVIK 405
+ YN +IN L K +++A L M +G PD TY LI + EE K
Sbjct: 994 PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK 1053
Query: 406 LHDYMVLKGVIPHKQTYKAVV 426
+++ + G+ P+ T+ A++
Sbjct: 1054 IYNEIQRAGLEPNVFTFNALI 1074
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 151/341 (44%), Gaps = 2/341 (0%)
Query: 95 EMMEKDIVP-NVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
++M+K I+ + TY T+ S L++A +M + G V+N+ YN +IH L
Sbjct: 142 DLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKS 201
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
+ M+ P TYS L GL + +++ ++ L + ++
Sbjct: 202 RFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTF 261
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
I I L R+ ++ A ++L M G PD+VT+ LID C ++ A +V+EKM
Sbjct: 262 TICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKT 321
Query: 274 SGEKPNLVLYNSVINGLCK-EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDE 332
KP+ V Y ++++ + ++ DV+T+ L++ C +G E
Sbjct: 322 GRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 381
Query: 333 AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
AF M++ GI N TYNTLI L ++ + A EL M G P TY + I
Sbjct: 382 AFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFID 441
Query: 393 SFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ K ++ + M KG+ P+ A + L + G
Sbjct: 442 YYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 136/303 (44%), Gaps = 1/303 (0%)
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
LEE + D M K+ + ++ Y T+ L V+G ++ + M + + ++Y+
Sbjct: 134 LEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L L ++ EA + + +++ +++ L+ L + ++ LL M G
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC-KEEXXXXX 299
L P++ TF I + G + A ++ ++M G P++V Y +I+ LC +
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ D +TY TL++ + ++ +D F M+ G + T+ L++ L
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
CK G+ +A + + VM QG +P+ TY LI + ++ ++L M GV P
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 420 QTY 422
TY
Sbjct: 434 YTY 436
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 122/299 (40%), Gaps = 36/299 (12%)
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
LV + N ++ L V+G +E ++ + M I D TY + K L G + +A
Sbjct: 114 LVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAP 173
Query: 196 KFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGH 255
K+ E + +A+S+N LI+ L +S
Sbjct: 174 YALRKMREFGFVLNAYSYNGLIHLLLKSR------------------------------F 203
Query: 256 CKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDV 314
C E A++VY +M+ G +P+L Y+S++ GL K + L +V
Sbjct: 204 CTE-----AMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNV 258
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
T+ I +GKI+EA+ M + G + TY LI+ LC + AKE+ +
Sbjct: 259 YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK 318
Query: 375 MILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
M PD +TY L+ FS + V + M G +P T+ +V L + G
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 180/396 (45%), Gaps = 45/396 (11%)
Query: 43 CKMGAMDLALKVVSKMEVMSVYS-IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDI 101
C G +D AL + KM +YS + P IT+N L+ G CK G + A+ L EM E
Sbjct: 132 CLQGKLDAALWLRKKM----IYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGP 187
Query: 102 VPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM-EGVS 160
PN +Y TLI G ++++A L + M K G+ N V N ++H L +G +
Sbjct: 188 SPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNK 247
Query: 161 LLISSMVDN---RIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILI 217
L+ ++D+ P D +IL +NGNV +A + ++ + N+ D+ +N++I
Sbjct: 248 KLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVII 307
Query: 218 NYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEK 277
LC S N+ A + M RG+ PD+ T+ +LI CKEG + A ++ M G
Sbjct: 308 RGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVA 367
Query: 278 PNLVLYNSVINGLCKE-----------------------------EXXXXXXXXXXXXXX 308
P+ + Y +I GLC +
Sbjct: 368 PDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427
Query: 309 MNLF-------DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
+NL +V T N LI+GY G++ +A+ M++ I + TYN L+ C
Sbjct: 428 LNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACT 487
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK 397
LGH++ A +L M+ +G PD ITYT L+ K
Sbjct: 488 LGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWK 523
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 165/362 (45%), Gaps = 32/362 (8%)
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
++ ++ C GKL A L+ +M+ ++P + T+ L++G +A +E+A L EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
+ G N V YNT+I L +++ L ++M I P++ T +I+ LC+ G +
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
K K+LE I D+ N + DIV L+
Sbjct: 244 NNNK---KLLEE--ILDSSQANAPL--------------------------DIVICTILM 272
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL- 311
D K GNV A++V+++M + + V+YN +I GLC +
Sbjct: 273 DSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVN 332
Query: 312 FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
DV TYNTLI+ C GK DEA M+N G+A + +Y +I LC G + +A E
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 372 MKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
+ M+ +P+ + + ++I + + + + + M+ GV P+ T A++ ++
Sbjct: 393 LLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVK 452
Query: 432 EG 433
G
Sbjct: 453 GG 454
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 150/327 (45%), Gaps = 36/327 (11%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGA------------- 47
N +I LC + +A+ +F K+GI PN VT N+I+ C+ G
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL 254
Query: 48 -----------------MDLALK---VVSKMEV---MSVYSIRPDSITYNCLIGGFCKMG 84
MD K VV +EV MS ++ DS+ YN +I G C G
Sbjct: 255 DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG 314
Query: 85 KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYN 144
+ A +M+++ + P+V TY TLI + +EA L M G+ + + Y
Sbjct: 315 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYK 374
Query: 145 TVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
+I L + GD+ + + SM+ + + P+ ++++ G R G+ + A + +L
Sbjct: 375 VIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSY 434
Query: 205 NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA 264
+ + +++N LI+ + L A + M + PD T+ L+ C G++ A
Sbjct: 435 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLA 494
Query: 265 VQVYEKMMKSGEKPNLVLYNSVINGLC 291
Q+Y++M++ G +P+++ Y ++ GLC
Sbjct: 495 FQLYDEMLRRGCQPDIITYTELVRGLC 521
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 5/294 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+I LC ++ A +K G+ P+V T+N +I CK G D A + M+
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
V PD I+Y +I G C G + A + M++ ++P V + +IDGY R
Sbjct: 364 GGV---APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
A + + M+ G+ N N +IH G + + + M +I PD TY++
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L C G++ AF+ + ++L D ++ L+ LC L A+ LL+ + G
Sbjct: 481 LLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
+ D V F L + + A VY+K + + + V S++N + EE
Sbjct: 541 ITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRG--VSCPSILNHMHTEE 592
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%)
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
+++++ C GK+D A M +G+ T+N L+N LCK G+I++A L++ M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 377 LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
G P+ ++Y LI + ++ + L + M G+ P++ T +V L Q+GV
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
>AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2733788-2735467 REVERSE
Length = 559
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 177/359 (49%), Gaps = 1/359 (0%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
D T N ++ C GKLT A KL M + VP+ + + L+ G +R L++A +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
M+ G V +++ YN +I L +G + +L+ M + PPD TY+ + + +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
GN +A +F L+N ++ +L+ +CR + A ++L M V G PDIVT+
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
SL++ +C+ GN+E V + ++ G + N V YN++++ LC E
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 309 MNLFD-VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQ 367
+ VITYN LING C + + A F + M + TYNT++ + K G +
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 368 AKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
A EL+ ++ P ITY +I +KK ++ ++L+ M+ G+ P T ++++
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI 461
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 192/390 (49%), Gaps = 4/390 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
++ L + +L +AM + + G P+ +T+NMII CK G + AL + +E MS
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVL---LEDMS 201
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
+ PD ITYN +I G A + + ++ P + TY L++ R
Sbjct: 202 LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA 261
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
A + ++M +G + V YN+++++ G++E V+ +I ++ + + + TY+ L
Sbjct: 262 RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
LC + +E + + + + + ++NILIN LC++ LS A M + +
Sbjct: 322 HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL 381
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
PDIVT+ +++ KEG V++A+++ + + P L+ YNSVI+GL K+
Sbjct: 382 PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Query: 303 XXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
+F D IT +LI G+C + ++EA N G +TY +I LCK
Sbjct: 442 YHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCK 501
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILI 391
I+ A E++++M+ G PD YT ++
Sbjct: 502 KKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 138/292 (47%), Gaps = 1/292 (0%)
Query: 144 NTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILE 203
N ++H L G + L+ M + P + S L +GL R +++A ++
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 204 NNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVEN 263
+ + D ++N++I LC+ ++ A LL M + G PD++T+ ++I GN E
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 264 AVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLIN 322
A++ ++ +++G P ++ Y ++ +C+ + D++TYN+L+N
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 323 GYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
C G ++E + + + G+ N TYNTL++ LC + + +E++ +M + P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 383 DYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
ITY ILI K I M+ + +P TY V+ + +EG+
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGM 399
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 3/194 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I LCK L A+ FY+ L+ P++VT+N ++ K G +D A++++ +
Sbjct: 353 NILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG---L 409
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ P ITYN +I G K G + A +L ++M++ I P+ T +LI G+ RA
Sbjct: 410 LKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANL 469
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+EEA ++ E +G + Y VI L + ++E ++ M+ PD+ Y+
Sbjct: 470 VEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTA 529
Query: 181 LTKGLCRNGNVNEA 194
+ KG+ G +EA
Sbjct: 530 IVKGVEEMGMGSEA 543
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%)
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
D T N +++ C++GK+ +A M + + + L+ L ++ + +A ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
+VM++ G VPD ITY ++I + KK + L + M L G P TY V+ +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 433 G 433
G
Sbjct: 223 G 223
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 203/436 (46%), Gaps = 40/436 (9%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
++ AL ++ +S+ + K+G+ P+ + FN II+ + + G +D A+K+ KM+
Sbjct: 359 TLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKES 418
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIV-PNVRTYATLIDGYSRARS 120
+P + T+N LI G+ K+GKL + +L + M+ +++ PN RT L+ + R
Sbjct: 419 GC---KPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRK 475
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIH-WLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+EEA+ + +M G+ + V +NT+ + + ++I M+ N++ P+ T
Sbjct: 476 IEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCG 535
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ G C G + EA +F ++ E + + F N LI N++ G +++ M
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF 595
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+ PD+VTF +L++ G+++ ++Y M++ G P
Sbjct: 596 GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP--------------------- 634
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
D+ ++ L GY +G+ ++A M+ G+ N Y +I+
Sbjct: 635 -------------DIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 681
Query: 360 CKLGHIQQAKELMKVMI-LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
C G +++A ++ K M + G P+ TY LI F + P + +L M K V+P
Sbjct: 682 CSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPT 741
Query: 419 KQTYKAVVSPLLQEGV 434
++T + + GV
Sbjct: 742 RKTMQLIADGWKSIGV 757
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 6/293 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHG-IWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
N +I K KL E+ + L+ + PN T N+++ C ++ A +V KM+
Sbjct: 428 NTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 487
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLK-NEMMEKDIVPNVRTYATLIDGYSRA 118
Y ++PD +T+N L + ++G AE + M+ + PNVRT T+++GY
Sbjct: 488 S---YGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE 544
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
+EEA R M + G+ N ++N++I DM+GV ++ M + + PD T+
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
S L G++ + ++ +LE + D + +IL R+ A+Q+L M
Sbjct: 605 STLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK-SGEKPNLVLYNSVINGL 290
G+ P++V + +I G C G ++ A+QVY+KM G PNL Y ++I G
Sbjct: 665 FGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGF 717
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 172/364 (47%), Gaps = 9/364 (2%)
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
L+ G + G+ A + N ++E+ P++ TY TL+ +R + L ++ K G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
L +++++N +I+ G+++ + M ++ P T++ L KG + G + E+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 196 KFHSKILENNLIE-DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
+ +L + +++ + + NIL+ C + A ++ M G+ PD+VTF +L
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 255 HCKEGNVENAVQ-VYEKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXM 309
+ + G+ A + +M+ + KPN+ +++NG C+ EE
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 310 NLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
NLF +N+LI G+ N +D M+ G+ + T++TL+N +G +++ +
Sbjct: 565 NLF---VFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 621
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
E+ M+ G PD ++IL +++ PE+ ++ + M GV P+ Y ++S
Sbjct: 622 EIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 681
Query: 430 LQEG 433
G
Sbjct: 682 CSAG 685
>AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18694316-18695734 REVERSE
Length = 472
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 167/374 (44%), Gaps = 68/374 (18%)
Query: 20 FYRSLKH-GIWPNVVTFNMIIDVACKM-GAMDLALKVVSKMEVMSVYSIRPDSITYNCLI 77
FY++++ G+ P V + N++I C+ G +D LK+ +M PDS TY LI
Sbjct: 143 FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEM---PKRGCDPDSYTYGTLI 199
Query: 78 GGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLV 137
G C+ G++ A+KL EM+EKD P V TY +LI+G +++++EA R +EM KG
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG-- 257
Query: 138 MNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKF 197
I P+ FTYS L GLC++G +A +
Sbjct: 258 ---------------------------------IEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 198 HSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK 257
++ + ++ LI LC+ + A +LL M ++GL PD +G +I G C
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 258 EGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITY 317
A ++M+ G PN + +N V T
Sbjct: 345 ISKFREAANFLDEMILGGITPNRLTWN---------------------------IHVKTS 377
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
N ++ G C + AF +M++ GI+ T +L+ LCK G Q+A +L+ ++
Sbjct: 378 NEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVT 436
Query: 378 QGFVPDYITYTILI 391
G +P T+ +LI
Sbjct: 437 DGCIPSKGTWKLLI 450
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 164/350 (46%), Gaps = 10/350 (2%)
Query: 94 NEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL-YV 152
++M + D P+ + Y T++ L AF+ M + GL N +I L
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169
Query: 153 EGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFS 212
+G ++ + M PD +TY L GLCR G ++EA K ++++E + +
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229
Query: 213 HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMM 272
+ LIN LC S N+ A + L M +G+ P++ T+ SL+DG CK+G A++++E MM
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 273 KSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKID 331
G +PN+V Y ++I GLCKE+ L D Y +I+G+C K
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFR 349
Query: 332 EAFAFSFAMKNAGIAANHATY-------NTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
EA F M GI N T+ N ++ LC + +A L M +G +
Sbjct: 350 EAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEV 408
Query: 385 ITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
T L+ KK ++ ++L D +V G IP K T+K ++ L + +
Sbjct: 409 ETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTI 458
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 173/382 (45%), Gaps = 26/382 (6%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
D ++ ++ K AE L M ++ V + ++ GY R ++ R+
Sbjct: 50 DQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
+M + Y TV+ L E + +M + +PP + ++L K LCRN
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169
Query: 189 -GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
G V+ K ++ + D++++ LI+ LCR + AK+L M + P +VT
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXX 307
+ SLI+G C NV+ A++ E+M G +PN+ Y+S+++GLCK+
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKD---------GRSLQ 280
Query: 308 XMNLFD----------VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
M LF+ ++TY TLI G C KI EA M G+ + Y +I+
Sbjct: 281 AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK----CS--PEEVIKLHDYMV 411
C + ++A + MIL G P+ +T+ I + + ++ C+ P L+ M
Sbjct: 341 GFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMR 400
Query: 412 LKGVIPHKQTYKAVVSPLLQEG 433
+G+ +T +++V L ++G
Sbjct: 401 SRGISVEVETLESLVKCLCKKG 422
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 198/429 (46%), Gaps = 4/429 (0%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+IYA C+ C + A ++ + GI + ++ ++D + L V +++
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
P +TY CLI + K+GK++ A ++ M E+ + N++TY+ +I+G+ + +
Sbjct: 480 ---FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
AF + ++M+K+G+ + ++YN +I G+M+ + M R P T+ +
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
G ++G++ + + + + + N LIN L + A ++L M + G+
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
+ T+ ++ G+ G+ A + + ++ G ++ Y +++ CK
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 303 XXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
N+ + YN LI+G+ G + EA MK G+ + TY + I+ K
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQT 421
G + +A + ++ M G P+ TYT LI +++ PE+ + ++ M G+ P K
Sbjct: 777 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Query: 422 YKAVVSPLL 430
Y +++ LL
Sbjct: 837 YHCLLTSLL 845
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 165/358 (46%), Gaps = 4/358 (1%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
K+ +A+ V + G+ N+ T++M+I+ K+ A V E M ++PD I
Sbjct: 499 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV---FEDMVKEGMKPDVI 555
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
YN +I FC MG + A + EM + P RT+ +I GY+++ + + + D M
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
+ G V +N +I+ L + ME ++ M + ++ TY+ + +G G+
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT 675
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
+AF++ +++ L D F++ L+ C+S + A + M R + + + L
Sbjct: 676 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNIL 735
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
IDG + G+V A + ++M K G KP++ Y S I+ K + +
Sbjct: 736 IDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGV 795
Query: 312 F-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
++ TY TLI G+ + ++A + MK GI + A Y+ L+ L I +A
Sbjct: 796 KPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 192/436 (44%), Gaps = 12/436 (2%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I+A + EA+S + + GI ++VT+++I+ K G + A E
Sbjct: 350 LIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFD--EAKR 407
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
++ SI Y +I C+ + AE L EM E+ I + Y T++DGY+ +
Sbjct: 408 IHKTLNASI-YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISS-MVDNRIPPDKFTYSIL 181
+ + + + G V Y +I+ LY + +L +S M + + + TYS++
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLIN-LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
G + + AF +++ + D +N +I+ C N+ A Q + M
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
P TF +I G+ K G++ +++V++ M + G P + +N +INGL ++
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 302 XXXXXXXMNLFDVI----TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
M L V TY ++ GY + G +AF + ++N G+ + TY L+
Sbjct: 646 ILDE---MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
CK G +Q A + K M + + Y ILI ++++ E L M +GV P
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 418 HKQTYKAVVSPLLQEG 433
TY + +S + G
Sbjct: 763 DIHTYTSFISACSKAG 778
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 159/372 (42%), Gaps = 14/372 (3%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGK---- 85
P+ F +++ + G M A + E M I P S Y LI + +G+
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARET---FERMRARGITPTSRIYTSLIHAYA-VGRDMDE 362
Query: 86 -LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYN 144
L+ K+K E +E +V TY+ ++ G+S+A E A DE + +N+ IY
Sbjct: 363 ALSCVRKMKEEGIEMSLV----TYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYG 418
Query: 145 TVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
+I+ +ME L+ M + I Y + G + + ++ E
Sbjct: 419 KIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC 478
Query: 205 NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA 264
++ LIN + +S A ++ M G+ ++ T+ +I+G K + NA
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 265 VQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVI-TYNTLING 323
V+E M+K G KP+++LYN++I+ C + T+ +I+G
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 324 YCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPD 383
Y SG + + M+ G T+N LIN L + +++A E++ M L G +
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 384 YITYTILITSFS 395
TYT ++ ++
Sbjct: 659 EHTYTKIMQGYA 670
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 159/376 (42%), Gaps = 7/376 (1%)
Query: 54 VVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLID 113
V+S E +S +P + ++ + + G + A + M + I P R Y +LI
Sbjct: 297 VISAFEKIS----KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIH 352
Query: 114 GYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPP 173
Y+ R ++EA +M ++G+ M+ V Y+ ++ G E
Sbjct: 353 AYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL 412
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED-AFSHNILINYLCRSNNLSGAKQL 232
+ Y + C+ N+ A ++ E + A H ++ Y ++ G +
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGL-VV 471
Query: 233 LASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
+ G P +VT+G LI+ + K G + A++V M + G K NL Y+ +ING K
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 293 EEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHAT 351
+ + DVI YN +I+ +C G +D A M+ T
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 352 YNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV 411
+ +I+ K G ++++ E+ +M G VP T+ LI +K E+ +++ D M
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 412 LKGVIPHKQTYKAVVS 427
L GV ++ TY ++
Sbjct: 652 LAGVSANEHTYTKIMQ 667
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I + + EA + + K G+ P++ T+ I K G M+ A + + +ME
Sbjct: 733 NILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEA 792
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ V +P+ TY LI G+ + A EM I P+ Y L+ S
Sbjct: 793 LGV---KPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 849
Query: 121 LEEAF------RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPD 174
+ EA+ +C EM++ GL+++ T +HW +E ++ + PPD
Sbjct: 850 IAEAYIYSGVMTICKEMVEAGLIVD---MGTAVHWSKCLCKIEASGGELTETLQKTFPPD 906
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 158/332 (47%), Gaps = 1/332 (0%)
Query: 92 LKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLY 151
KN I PN+ T L+ + +E A+++ DE+ GLV N V Y T++
Sbjct: 178 FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYV 237
Query: 152 VEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAF 211
GDME ++ M+D PD TY++L G C+ G +EA + +N + +
Sbjct: 238 ARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Query: 212 SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
++ ++I LC+ A+ + M R +PD +ID C++ V+ A ++ KM
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
Query: 272 MKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKID 331
+K+ P+ L +++I+ LCKE ++ ++TYNTLI G C G++
Sbjct: 358 LKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELT 417
Query: 332 EAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
EA M N TYN LI L K G++++ +++ M+ G P+ T+ IL
Sbjct: 418 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILF 477
Query: 392 TSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYK 423
K E+ +K+ V+ G + K++++
Sbjct: 478 EGLQKLGKEEDAMKIVSMAVMNGKV-DKESWE 508
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 178/394 (45%), Gaps = 52/394 (13%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
GI PN+ T N+++ CK ++ A KV+ ++ M + P+ +TY ++GG+ G +
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLV---PNLVTYTTILGGYVARGDM 242
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
A+++ EM+++ P+ TY L+DGY + EA + D+M K + N V Y +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
I L E + M++ PD + LC + V+EA K+L+NN
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
+ D + LI++LC+ ++ A++L + +G +P ++T+ +LI G C++G + A +
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGR 421
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCN 326
+++ M + KPN YN +I GL K
Sbjct: 422 LWDDMYERKCKPNAFTYNVLIEGLSK---------------------------------- 447
Query: 327 SGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYIT 386
+G + E M G N T+ L L KLG + A +++ + ++ G V D +
Sbjct: 448 NGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV-DKES 506
Query: 387 YTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
+ + + F+ + KGV+P K+
Sbjct: 507 WELFLKKFAGELD-------------KGVLPLKE 527
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 4/292 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ ALCK+ + A V G+ PN+VT+ I+ G M+ A +V+ +M
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 254
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
Y PD+ TY L+ G+CK+G+ + A + ++M + +I PN TY +I + +
Sbjct: 255 RGWY---PDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
EA + DEM+++ + +S + VI L + ++ L M+ N PD S
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L LC+ G V EA K + E I ++N LI +C L+ A +L MY R
Sbjct: 372 LIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
P+ T+ LI+G K GNV+ V+V E+M++ G PN + + GL K
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK 482
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 6/208 (2%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
V+I ALCKE K EA ++F L+ P+ +ID C+ +D A + KM
Sbjct: 301 VMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKN 360
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
+ PD+ + LI CK G++T A KL +E EK +P++ TY TLI G L
Sbjct: 361 NCM---PDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGEL 416
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM-EGVSLLISSMVDNRIPPDKFTYSI 180
EA RL D+M ++ N+ YN +I L G++ EGV +L M++ P+K T+ I
Sbjct: 417 TEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL-EEMLEIGCFPNKTTFLI 475
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIE 208
L +GL + G +A K S + N ++
Sbjct: 476 LFEGLQKLGKEEDAMKIVSMAVMNGKVD 503
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 34/223 (15%)
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
F+ N+L+ LC+ N++ A ++L + GLVP++VT+ +++ G+ G++E+A +V E+
Sbjct: 192 FTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKI 330
M+ G P D TY L++GYC G+
Sbjct: 252 MLDRGWYP----------------------------------DATTYTVLMDGYCKLGRF 277
Query: 331 DEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
EA M+ I N TY +I LCK +A+ + M+ + F+PD +
Sbjct: 278 SEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKV 337
Query: 391 ITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
I + + +E L M+ +P ++ L +EG
Sbjct: 338 IDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 41/303 (13%)
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN----GN 190
G N Y++++ L + V L++ + N PP K ++ L RN G
Sbjct: 78 GFTHNYDTYHSILFKLSRARAFDPVESLMADL-RNSYPPIKCGENLFID-LLRNYGLAGR 135
Query: 191 VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLA-SMYVRGLVPDIVTFG 249
+ + +I + + S N L+N L ++ + S G+ P+I T
Sbjct: 136 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCN 195
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM 309
L+ CK+ ++E+A +V +++ G PNLV
Sbjct: 196 LLVKALCKKNDIESAYKVLDEIPSMGLVPNLV---------------------------- 227
Query: 310 NLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
TY T++ GY G ++ A M + G + TY L++ CKLG +A
Sbjct: 228 ------TYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAA 281
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
+M M P+ +TY ++I + K+ E + D M+ + +P V+ L
Sbjct: 282 TVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDAL 341
Query: 430 LQE 432
++
Sbjct: 342 CED 344
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 197/416 (47%), Gaps = 11/416 (2%)
Query: 4 IYALCKECK--LLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
I LCK K L++A+ +L G P++ FN+ +D+ C+ + A V M
Sbjct: 86 ISGLCKVKKFDLIDALLSDMETL--GFIPDIWAFNVYLDLLCRENKVGFA---VQTFFCM 140
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
PD ++Y LI G + GK+T A ++ N M+ + P+ + A L+ G AR +
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 122 EEAFRLCDEMMKKGLV-MNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ A+ + E +K V +++V+YN +I G +E L S M PD TY++
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLA-SMYVR 239
L N + A ++++ + + DA+S+N L+ CR ++ + M R
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR 320
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G D+V++ +LI+ C+ N A +++E+M + G N+V Y S+I +E
Sbjct: 321 GFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVA 379
Query: 300 XXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
+ L D I Y T+++ C SG +D+A+ M I + +YN+LI+
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISG 439
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKG 414
LC+ G + +A +L + M + PD +T+ +I + K+ D M+ KG
Sbjct: 440 LCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 195/395 (49%), Gaps = 5/395 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV + LC+E K+ A+ F+ ++ G P+VV++ ++I+ + G + A+++ + M +
Sbjct: 118 NVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAM-I 176
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMA-EKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
S + PD+ L+ G C K+ +A E + E+ + + Y LI G+ +A
Sbjct: 177 RS--GVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+E+A L M K G + V YN ++++ Y ++ +++ MV + I D ++Y+
Sbjct: 235 RIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYN 294
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L K CR + ++ + F K +E D S++ LI CR++N A +L M +
Sbjct: 295 QLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQK 354
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+V ++VT+ SLI +EGN A ++ ++M + G P+ + Y ++++ LCK
Sbjct: 355 GMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 300 XXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
+ D I+YN+LI+G C SG++ EA MK + T+ +I
Sbjct: 415 YGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGG 474
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
L + + A ++ M+ +GF D LI +
Sbjct: 475 LIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 177/364 (48%), Gaps = 5/364 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++I L + K+ +A+ ++ ++ G+ P+ ++ C +DLA ++V++ E+
Sbjct: 153 TILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAE-EI 211
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S ++ ++ YN LI GFCK G++ AE LK+ M + P++ TY L++ Y
Sbjct: 212 KSA-RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNM 270
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVI-HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
L+ A + EM++ G+ +++ YN ++ V + + ++ M + R D +YS
Sbjct: 271 LKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEM-EPRGFCDVVSYS 329
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L + CR N +A++ ++ + ++ + ++ LI R N S AK+LL M
Sbjct: 330 TLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL 389
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
GL PD + + +++D CK GNV+ A V+ M++ P+ + YNS+I+GLC+
Sbjct: 390 GLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEA 449
Query: 300 XXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
D +T+ +I G K+ A+ M + G + +TLI
Sbjct: 450 IKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Query: 359 LCKL 362
C +
Sbjct: 510 SCSM 513
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 188/401 (46%), Gaps = 5/401 (1%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
+N I V + +LA + M+ M +S+ P TY+ I G CK+ K + + L +
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMG-FSLIP--FTYSRFISGLCKVKKFDLIDALLS 103
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG 154
+M +P++ + +D R + A + M+++G + V Y +I+ L+ G
Sbjct: 104 DMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAG 163
Query: 155 DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE-DAFSH 213
+ + ++M+ + + PD + L GLC V+ A++ ++ +++ ++ +
Sbjct: 164 KVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVY 223
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
N LI+ C++ + A+ L + M G PD+VT+ L++ + ++ A V +M++
Sbjct: 224 NALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVR 283
Query: 274 SGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDE 332
SG + + YN ++ C+ F DV++Y+TLI +C + +
Sbjct: 284 SGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRK 343
Query: 333 AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
A+ M+ G+ N TY +LI + G+ AK+L+ M G PD I YT ++
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 393 SFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
K + ++ + + M+ + P +Y +++S L + G
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 2/255 (0%)
Query: 175 KFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLA 234
+ Y L ++G ++ A + ++ ++ +F +N I L R + A+ +
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
M G T+ I G CK + + M G P++ +N ++ LC+E
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 295 XXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYN 353
DV++Y LING +GK+ +A AM +G++ ++
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 354 TLINFLCKLGHIQQAKELMKVMILQGFVP-DYITYTILITSFSKKCSPEEVIKLHDYMVL 412
L+ LC + A E++ I V + Y LI+ F K E+ L YM
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 413 KGVIPHKQTYKAVVS 427
G P TY +++
Sbjct: 249 IGCEPDLVTYNVLLN 263
>AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11425270-11427669 REVERSE
Length = 799
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 200/471 (42%), Gaps = 45/471 (9%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
VI CK L EA+ + L G+ N V ++I+ CKM D+ L+ + K +
Sbjct: 324 VIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKM---DMCLEALEKFKEFR 380
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
+I D + YN K+G++ A +L EM ++ IVP+V Y TLIDGY +
Sbjct: 381 DMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVV 440
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+A L DEM+ G+ + + YN ++ L G E V + M P+ T S++
Sbjct: 441 DALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVII 500
Query: 183 KGLCRNGNVNEAFKFHSKI---------------LENNLIEDAFSHNILINY-------- 219
+GLC V EA F S + E L + A+ + + Y
Sbjct: 501 EGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYI 560
Query: 220 -----LCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
LC L A +L M + P G +I CK NV A +++ M++
Sbjct: 561 KLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER 620
Query: 275 GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGY--------- 324
G P+L Y +I+ C+ + DV+TY L++ Y
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHE 680
Query: 325 -CN-SGKIDEAFAFSF--AMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGF 380
C+ G++ + A AGI + Y LI+ CK+ +++QA EL MI G
Sbjct: 681 TCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGL 740
Query: 381 VPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
PD + YT LI+S+ +K + + L + K IP + AV S L+
Sbjct: 741 EPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALK 791
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 165/409 (40%), Gaps = 60/409 (14%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV AL K ++ EA + GI P+V+ + +ID C G + AL ++ +
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE--- 448
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M + PD ITYN L+ G + G ++ M + PN T + +I+G AR
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARK 508
Query: 121 LEEAFRLCDEMMKK---------------GLV-------------MNSVIYNTVIHWLYV 152
++EA + +K GL + +Y + L +
Sbjct: 509 VKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCI 568
Query: 153 EGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFS 212
EG +E ++ M R+ P + + C+ NV EA ++E LI D F+
Sbjct: 569 EGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFT 628
Query: 213 HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK-----------EGNV 261
+ I+I+ CR N L A+ L M RG+ PD+VT+ L+D + K +G V
Sbjct: 629 YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEV 688
Query: 262 --ENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYN 318
A +V + +G ++V Y +I+ CK L D++ Y
Sbjct: 689 GKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYT 748
Query: 319 TLINGYCNSGKIDEAF---------------AFSFAMKNAGIAANHATY 352
TLI+ Y G ID A +F A+K+A + A Y
Sbjct: 749 TLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKRFQY 797
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 179/421 (42%), Gaps = 27/421 (6%)
Query: 20 FYRSLK-HGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIG 78
F R LK HG+ PNV + ++ + G +D+ K++ + V I+ +
Sbjct: 76 FLRQLKEHGVSPNVNAYATLVRILTTWG-LDI------KLDSVLVELIKNEE-------R 121
Query: 79 GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVM 138
GF M + + + E ++ +R L+ Y +EA + + + V+
Sbjct: 122 GFTVMDLIEVIGEQAEEKKRSFVL--IRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVV 179
Query: 139 NSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFH 198
+ N +++ + G + + L + + +++TY+I+ K LCR GN+ EA
Sbjct: 180 DIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAML- 238
Query: 199 SKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP--DI-VTFGSLIDGH 255
++EN E F + IN LC + A L+ + R + D+ G ++ G
Sbjct: 239 --LIEN---ESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGF 293
Query: 256 CKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDV 314
C E ++ A V +M + G ++ +VI+ CK L +
Sbjct: 294 CNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNC 353
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
+ + ++ YC EA ++ I + YN + L KLG +++A EL++
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQE 413
Query: 375 MILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
M +G VPD I YT LI + + + + L D M+ G+ P TY +VS L + G
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 435 E 435
E
Sbjct: 474 E 474
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 184/410 (44%), Gaps = 50/410 (12%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
V N +I K+G ++ L V KM+ I P TYN L+ G + AE
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKE---NGIEPTLYTYNFLMNGLVSAMFVDSAE 242
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
++ M I P++ TY T+I GY +A ++A +M +G + + Y T+I
Sbjct: 243 RVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC 302
Query: 151 YVEGDMEGVSLLISSMVDN--RIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
Y + D L M + ++PP F S++ GLC+ G +NE + + EN
Sbjct: 303 YADSDFGSCVALYQEMDEKGIQVPPHAF--SLVIGGLCKEGKLNEGYT----VFEN---- 352
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
M +G P++ + LIDG+ K G+VE+A+++
Sbjct: 353 ---------------------------MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLL 385
Query: 269 EKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVITYNTLINGY 324
+M+ G KP++V Y+ V+NGLCK EE +N + Y++LI+G
Sbjct: 386 HRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN---SMFYSSLIDGL 442
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ-GFVPD 383
+G++DEA M G + YN LI+ K + +A L K M + G
Sbjct: 443 GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 384 YITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
TYTIL++ K+ EE +KL D M+ KG+ P ++A+ + L G
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSG 552
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 190/417 (45%), Gaps = 8/417 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I + K + E + V+ + ++GI P + T+N +++ +D A +V EV
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERV---FEV 247
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMA-EKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
M I+PD +TYN +I G+CK G+ A EKL++ M + + TY T+I
Sbjct: 248 MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD-METRGHEADKITYMTMIQACYADS 306
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
L EM +KG+ + ++ VI L EG + + +M+ P+ Y+
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+L G ++G+V +A + ++++ D ++++++N LC++ + A +
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD 426
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
GL + + + SLIDG K G V+ A +++E+M + G + YN++I+ K
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Query: 300 XXXXXXXXXMNLFD--VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
D V TY L++G + +EA M + GI A + L
Sbjct: 487 IALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALST 546
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKG 414
LC G + +A +++ + G + D +I + K +E KL D + +G
Sbjct: 547 GLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERG 602
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 143/293 (48%), Gaps = 5/293 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++VI LCKE KL E +VF ++ G PNV + ++ID K G+++ A++++ +
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR--- 387
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M +PD +TY+ ++ G CK G++ A + + N Y++LIDG +A
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM-EGVSLLISSMVDNRIPPDKFTYS 179
++EA RL +EM +KG +S YN +I + E ++L + +TY+
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 507
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
IL G+ + EA K +++ + A L LC S ++ A ++L +
Sbjct: 508 ILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPM 567
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
G++ D +I+ CK G ++ A ++ + + + G + + +IN L K
Sbjct: 568 GVILDAAC-EDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRK 619
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 144/335 (42%), Gaps = 1/335 (0%)
Query: 98 EKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME 157
+K N+ Y +L+D + A+ ++ + E+ K M N +I G +E
Sbjct: 145 QKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVE 204
Query: 158 GVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILI 217
+ + M +N I P +TY+ L GL V+ A + + + D ++N +I
Sbjct: 205 ELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMI 264
Query: 218 NYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEK 277
C++ A + L M RG D +T+ ++I + + + V +Y++M + G +
Sbjct: 265 KGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 324
Query: 278 PNLVLYNSVINGLCKE-EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAF 336
++ VI GLCKE + + +V Y LI+GY SG +++A
Sbjct: 325 VPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRL 384
Query: 337 SFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
M + G + TY+ ++N LCK G +++A + G + + Y+ LI K
Sbjct: 385 LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 444
Query: 397 KCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
+E +L + M KG Y A++ +
Sbjct: 445 AGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK 479
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 140/335 (41%), Gaps = 4/335 (1%)
Query: 101 IVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVS 160
+ PN ++ D + +F C +K N Y +++ L + D++ +
Sbjct: 114 LSPNFVSFVLKSDEIREKPDIAWSF-FCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIR 172
Query: 161 LLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYL 220
+ S + P + L K + G V E K+ EN + +++N L+N L
Sbjct: 173 FVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGL 232
Query: 221 CRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNL 280
+ + A+++ M + PDIVT+ ++I G+CK G + A++ M G + +
Sbjct: 233 VSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADK 292
Query: 281 VLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVI--TYNTLINGYCNSGKIDEAFAFSF 338
+ Y ++I C + V ++ +I G C GK++E +
Sbjct: 293 ITYMTMIQA-CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE 351
Query: 339 AMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKC 398
M G N A Y LI+ K G ++ A L+ MI +GF PD +TY++++ K
Sbjct: 352 NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNG 411
Query: 399 SPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
EE + G+ + Y +++ L + G
Sbjct: 412 RVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 446
>AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29747102-29748832 REVERSE
Length = 576
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 194/436 (44%), Gaps = 11/436 (2%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
++Y LCK +L +A+ V + GI P+ + +++ CK G + A+++V KME
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
S +++TYN L+ G C +G L + + +M+K + PN TY+ L++ + R +
Sbjct: 172 YPS---NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTD 228
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
EA +L DE++ KG N V YN ++ EG + L + + +Y+IL
Sbjct: 229 EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL 288
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV--RG 240
+ LC +G EA +++ + ++NILIN L A Q+L M
Sbjct: 289 RCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQ 348
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
++ +I CKEG V+ V+ ++M+ KPN YN+ I LC E
Sbjct: 349 FRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLC-EHNSKVQE 406
Query: 301 XXXXXXXXMNLFDVIT---YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
N T Y ++I C G AF + M G + TY+ LI
Sbjct: 407 AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR 466
Query: 358 FLCKLGHIQQAKELMKVM-ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
LC G A E++ +M + P + +I K + +++ + MV K +
Sbjct: 467 GLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRM 526
Query: 417 PHKQTYKAVVSPLLQE 432
P++ TY +V + E
Sbjct: 527 PNETTYAILVEGIAHE 542
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 165/369 (44%), Gaps = 8/369 (2%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
G PNV ++ CK + A++V+ E+M I PD+ Y L+ CK G +
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVI---ELMVSSGIIPDASAYTYLVNQLCKRGNV 157
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
A +L +M + N TY L+ G SL ++ + + +M+KGL N+ Y+ +
Sbjct: 158 GYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFL 217
Query: 147 IHWLYVE-GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
+ Y E G E V LL +V P+ +Y++L G C+ G ++A ++
Sbjct: 218 LEAAYKERGTDEAVKLLDEIIVKGG-EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG 276
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
+ S+NIL+ LC A LLA M P +VT+ LI+ G E A+
Sbjct: 277 FKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAL 336
Query: 266 QVYEKMMKSGEKPNLVL--YNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLIN 322
QV ++M K + + YN VI LCKE + TYN + +
Sbjct: 337 QVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGS 396
Query: 323 GYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
++ K+ EAF ++ N H Y ++I LC+ G+ A +L+ M GF P
Sbjct: 397 LCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDP 456
Query: 383 DYITYTILI 391
D TY+ LI
Sbjct: 457 DAHTYSALI 465
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 154/327 (47%), Gaps = 36/327 (11%)
Query: 103 PNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLL 162
PNV L+ +A L++A R+ + M+ G++ ++ Y +++ L G++ L
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 163 ISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR 222
+ M D+ P + TY+ L +GLC G++N++ +F ++++ L +AF+++ L+ +
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVL 282
A +LL + V+G P++V++ L+ G CKEG ++A+ ++ ++ G K N+V
Sbjct: 224 ERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVV- 282
Query: 283 YNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKN 342
+YN L+ C G+ +EA + M
Sbjct: 283 ---------------------------------SYNILLRCLCCDGRWEEANSLLAEMDG 309
Query: 343 AGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL--QGFVPDYITYTILITSFSKKCSP 400
A + TYN LIN L G +QA +++K M F +Y +I K+
Sbjct: 310 GDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKV 369
Query: 401 EEVIKLHDYMVLKGVIPHKQTYKAVVS 427
+ V+K D M+ + P++ TY A+ S
Sbjct: 370 DLVVKCLDEMIYRRCKPNEGTYNAIGS 396
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 150/333 (45%), Gaps = 47/333 (14%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ LC L +++ R ++ G+ PN T++ +++ A K D A+K++ +
Sbjct: 180 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDE--- 236
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLI-------- 112
+ V P+ ++YN L+ GFCK G+ A L E+ K NV +Y L+
Sbjct: 237 IIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGR 296
Query: 113 -----------DGYSRARSL----------------EEAFRLCDEMMKKG--LVMNSVIY 143
DG RA S+ E+A ++ EM K + + Y
Sbjct: 297 WEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSY 356
Query: 144 NTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILE 203
N VI L EG ++ V + M+ R P++ TY+ + N V EAF + + L
Sbjct: 357 NPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAF-YIIQSLS 415
Query: 204 NNLIEDAFSHNI---LINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGN 260
N + +H+ +I LCR N A QLL M G PD T+ +LI G C EG
Sbjct: 416 NK--QKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGM 473
Query: 261 VENAVQVYEKMMKSGE-KPNLVLYNSVINGLCK 292
A++V M +S KP + +N++I GLCK
Sbjct: 474 FTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 2/272 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ LC + + EA S+ P+VVT+N++I+ G + AL+V+ +M
Sbjct: 285 NILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSK 344
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ + R + +YN +I CK GK+ + K +EM+ + PN TY +
Sbjct: 345 GN-HQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSK 403
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++EAF + + K Y +VI L +G+ L+ M PD TYS
Sbjct: 404 VQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSA 463
Query: 181 LTKGLCRNGNVNEAFKFHSKILEN-NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L +GLC G A + S + E+ N + N +I LC+ A ++ M +
Sbjct: 464 LIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEK 523
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
+P+ T+ L++G E +E A +V +++
Sbjct: 524 KRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 132/297 (44%), Gaps = 6/297 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV++ CKE + +AM++F G NVV++N+++ C G + A ++++M+
Sbjct: 250 NVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDG 309
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKD--IVPNVRTYATLIDGYSRA 118
P +TYN LI G+ A ++ EM + + +Y +I +
Sbjct: 310 GDRA---PSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKE 366
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
++ + DEM+ + N YN + ++ +I S+ + + Y
Sbjct: 367 GKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFY 426
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM-Y 237
+ LCR GN AF+ ++ DA +++ LI LC +GA ++L+ M
Sbjct: 427 KSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEE 486
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
P + F ++I G CK + A++V+E M++ PN Y ++ G+ E+
Sbjct: 487 SENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHED 543
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
PD+ + D E N+ ++ E ++ G KPN+ ++ LCK
Sbjct: 69 PDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRV 128
Query: 303 XXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
+ D Y L+N C G + A M++ G +N TYN L+ LC
Sbjct: 129 IELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCM 188
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQT 421
LG + Q+ + ++ ++ +G P+ TY+ L+ + K+ +E +KL D +++KG P+ +
Sbjct: 189 LGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVS 248
Query: 422 YKAVVSPLLQEG 433
Y +++ +EG
Sbjct: 249 YNVLLTGFCKEG 260
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
VI +LC++ A + Y + G P+ T++ +I C G A++V+S ME
Sbjct: 429 VITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME--E 486
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
+ +P +N +I G CK+ + +A ++ M+EK +PN TYA L++G + LE
Sbjct: 487 SENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELE 546
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHW 149
A + DE+ + ++ + + V+ +
Sbjct: 547 LAKEVLDELRLRKVIGQNAVDRIVMQF 573
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 174/402 (43%), Gaps = 4/402 (0%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
+V N II K G AL+++ + + + + T +I G+ AE
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSA---KTATLVSIISALADSGRTLEAE 324
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
L E+ + I P R Y L+ GY + L++A + EM K+G+ + Y+ +I
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
G E +++ M + P+ F +S L G G + F+ ++ + D
Sbjct: 385 VNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDR 444
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
+N++I+ + N L A M G+ PD VT+ +LID HCK G A +++E
Sbjct: 445 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 504
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGK 329
M + G P YN +IN +E + +V+T+ TL++ Y SG+
Sbjct: 505 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 330 IDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
++A MK+ G+ + YN LIN + G +QA +VM G P +
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 390 LITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
LI +F + E + YM GV P TY ++ L++
Sbjct: 625 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 187/437 (42%), Gaps = 11/437 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+++I+AL + KL EA F S K + P +T+N +I + ++ AL +++KM
Sbjct: 171 SILIHALGRSEKLYEA---FLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKL--TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRA 118
S D + Y+ +I + K+ M +L E+ + +V+ +I G++++
Sbjct: 226 DGYQS---DFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
+A +L GL + ++I L G L + + I P Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ L KG + G + +A S++ + + D ++++LI+ + A+ +L M
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXX 298
+ P+ F L+ G G + QV ++M G KP+ YN VI+ K
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 299 XXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
+ D +T+NTLI+ +C G+ A AM+ G TYN +IN
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
K L+ M QG +P+ +T+T L+ + K + I+ + M G+ P
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 418 HKQTYKAVVSPLLQEGV 434
Y A+++ Q G+
Sbjct: 583 SSTMYNALINAYAQRGL 599
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 38/279 (13%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NVVI K L AM+ F R L GI P+ VT+N +ID CK G +A ++ ME
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
P + TYN +I + + ++L +M + I+PNV T+ TL+D Y ++
Sbjct: 508 RGCL---PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+A +EM GL +S +YN +I+ +
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALIN------------------------------AY 594
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+GL VN AF+ + + L + N LIN + A +L M G
Sbjct: 595 AQRGLSEQA-VN-AFRV---MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPN 279
+ PD+VT+ +L+ + + VYE+M+ SG KP+
Sbjct: 650 VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Query: 26 HGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGK 85
GI PNVVT ++DV K G + A++ +E M ++P S YN LI + + G
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFNDAIEC---LEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 86 LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNT 145
A M + P++ +LI+ + R EAF + M + G+ + V Y T
Sbjct: 600 SEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 659
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
++ L + V ++ M+ + PD+ S+L L
Sbjct: 660 LMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
>AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8947426-8949424 FORWARD
Length = 574
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 188/365 (51%), Gaps = 8/365 (2%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
FN +I+ + G M+ A++ + KM+ + + P + TYN LI G+ GK + +L +
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELG---LNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 95 EMMEK---DIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLY 151
M+E+ D+ PN+RT+ L+ + + + +EEA+ + +M + G+ ++V YNT+
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 152 VEGD-MEGVSLLISSMV-DNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
+G+ + S ++ MV + P+ T I+ G CR G V + +F ++ E + +
Sbjct: 235 QKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEAN 294
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
N LIN + G ++L M + D++T+ ++++ G +E A QV++
Sbjct: 295 LVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFK 354
Query: 270 KMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGK 329
+M+K+G KP+ Y+ + G + + + +V+ + T+I+G+C++G
Sbjct: 355 EMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGS 414
Query: 330 IDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
+D+A M G++ N T+ TL+ ++ +A+E++++M G P+ T+ +
Sbjct: 415 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLL 474
Query: 390 LITSF 394
L ++
Sbjct: 475 LAEAW 479
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 195/420 (46%), Gaps = 39/420 (9%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
EA +VF + G P+++++ ++ +VS++E + DSI +N
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGT---KLDSIFFN 119
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
+I F + G + A + +M E + P TY TLI GY A E + L D M+++
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
G V + P+ T+++L + C+ V EA
Sbjct: 180 GNV--------------------------------DVGPNIRTFNVLVQAWCKKKKVEEA 207
Query: 195 FKFHSKILENNLIEDAFSHNILIN-YLCRSNNLSGAKQLLASMYVRGLV-PDIVTFGSLI 252
++ K+ E + D ++N + Y+ + + +++ M ++ P+ T G ++
Sbjct: 208 WEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVV 267
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL- 311
G+C+EG V + ++ +M + + NLV++NS+ING + N+
Sbjct: 268 GGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVK 327
Query: 312 FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
DVITY+T++N + ++G +++A M AG+ + Y+ L + ++A+EL
Sbjct: 328 ADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 387
Query: 372 MKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
++ +I++ P+ + +T +I+ + S ++ +++ + M GV P+ +T++ ++ L+
Sbjct: 388 LETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLE 446
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 175/385 (45%), Gaps = 17/385 (4%)
Query: 58 MEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR 117
+E S ++R + N LI + G+ A+ + + E P++ +Y TL+ +
Sbjct: 37 VEGSSCRTVRSRTKLMNVLI----ERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTV 92
Query: 118 ARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFT 177
+ + E+ + G ++S+ +N VI+ G+ME + M + + P T
Sbjct: 93 QKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIE---DAFSHNILINYLCRSNNLSGAKQLLA 234
Y+ L KG G + + +LE ++ + + N+L+ C+ + A +++
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEG-NVENAVQVYEKM-MKSGEKPNLVLYNSVINGLCK 292
M G+ PD VT+ ++ + ++G V +V EKM MK KPN V+ G C+
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272
Query: 293 EEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYC---NSGKIDEAFAFSFAMKNAGIAAN 348
E M + +++ +N+LING+ + IDE MK + A+
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTL---MKECNVKAD 329
Query: 349 HATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHD 408
TY+T++N G++++A ++ K M+ G PD Y+IL + + P++ +L +
Sbjct: 330 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLE 389
Query: 409 YMVLKGVIPHKQTYKAVVSPLLQEG 433
++++ P+ + V+S G
Sbjct: 390 TLIVESR-PNVVIFTTVISGWCSNG 413
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 45/293 (15%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLA-LKVVSKME 59
NV++ A CK+ K+ EA V + + G+ P+ VT+N I + G A +VV KM
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKM- 250
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRA- 118
VM + +P+ T ++GG+C+ G++ + M E + N+ + +LI+G+
Sbjct: 251 VMKEKA-KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVM 309
Query: 119 --RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKF 176
++E L E K V + Y+TV++ G ME + + MV + PD
Sbjct: 310 DRDGIDEVLTLMKECNVKADV---ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 366
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
YSIL KG R +A ++LE ++E
Sbjct: 367 AYSILAKGYVRAKEPKKA----EELLETLIVESR-------------------------- 396
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING 289
P++V F ++I G C G++++A++V+ KM K G PN+ + +++ G
Sbjct: 397 ------PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 443
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 12/248 (4%)
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
++F +E + S L+N L A+ + ++ G P ++++ +L+
Sbjct: 30 YRFCKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAA 89
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDV 314
+ + + ++ +SG K + + +N+VIN + + L
Sbjct: 90 MTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPT 149
Query: 315 I-TYNTLINGYCNSGKID---EAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
TYNTLI GY +GK + E N + N T+N L+ CK +++A E
Sbjct: 150 TSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWE 209
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI-----PHKQTYKAV 425
++K M G PD +TY + T + +K E ++ +V K V+ P+ +T V
Sbjct: 210 VVKKMEECGVRPDTVTYNTIATCYVQKG---ETVRAESEVVEKMVMKEKAKPNGRTCGIV 266
Query: 426 VSPLLQEG 433
V +EG
Sbjct: 267 VGGYCREG 274
>AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13454853-13456418 FORWARD
Length = 521
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 139/272 (51%), Gaps = 4/272 (1%)
Query: 20 FYRSLKH-GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIG 78
FYR ++ I PN T NM++ C+ G +D ++++ ME + R ++YN LI
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLG---FRATDVSYNTLIA 281
Query: 79 GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVM 138
G C+ G L+ A KLKN M + + PNV T+ TLI G+ RA L+EA ++ EM +
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 139 NSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFH 198
N+V YNT+I+ +GD E MV N I D TY+ L GLC+ +A +F
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 199 SKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
++ + NL+ ++ + + LI C N +L SM G P+ TF L+ C+
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
+ + A QV +M++ + + V NGL
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 132/283 (46%), Gaps = 3/283 (1%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
K A F + +G P V + N + G +D+AL+ +M I P+
Sbjct: 183 KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK---ISPNPY 239
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
T N ++ G+C+ GKL +L +M +Y TLI G+ L A +L + M
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
K GL N V +NT+IH ++ S + M + P+ TY+ L G + G+
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
AF+F+ ++ N + D ++N LI LC+ A Q + + LVP+ TF +L
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
I G C N + ++Y+ M++SG PN +N +++ C+ E
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 128/240 (53%), Gaps = 1/240 (0%)
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
G V+ A +F+ ++ + + ++ N++++ CRS L +LL M G V++
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
+LI GHC++G + +A+++ M KSG +PN+V +N++I+G C+
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 309 MNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQ 367
+N+ + +TYNTLINGY G + AF F M GI + TYN LI LCK ++
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 368 AKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
A + +K + + VP+ T++ LI + + + +L+ M+ G P++QT+ +VS
Sbjct: 397 AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVS 456
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 135/271 (49%), Gaps = 3/271 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+V+ C+ KL + + + + G V++N +I C+ G + ALK+ + +
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKN---M 298
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M ++P+ +T+N LI GFC+ KL A K+ EM ++ PN TY TLI+GYS+
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
E AFR ++M+ G+ + + YN +I L + + + + + P+ T+S
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C N + F+ + ++ + + + N+L++ CR+ + GA Q+L M R
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
+ D T + +G +G + ++ ++M
Sbjct: 479 IPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 138/327 (42%), Gaps = 36/327 (11%)
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M Y P + N + G++ +A + EM I PN T ++ GY R+
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L++ L +M + G V YNT+I
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLI--------------------------------- 280
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
G C G ++ A K + + ++ L + + N LI+ CR+ L A ++ M
Sbjct: 281 --AGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ P+ VT+ +LI+G+ ++G+ E A + YE M+ +G + +++ YN++I GLCK+
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
NL + T++ LI G C D F +M +G N T+N L++
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYIT 386
C+ A ++++ M+ + D T
Sbjct: 459 CRNEDFDGASQVLREMVRRSIPLDSRT 485
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 146/337 (43%), Gaps = 3/337 (0%)
Query: 98 EKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME 157
E D P R + +L ++ + A +M G + N + L +G ++
Sbjct: 163 ECDSTP--RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVD 220
Query: 158 GVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILI 217
M +I P+ +T +++ G CR+G +++ + + S+N LI
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 218 NYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEK 277
C LS A +L M GL P++VTF +LI G C+ ++ A +V+ +M
Sbjct: 281 AGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVA 340
Query: 278 PNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAF 336
PN V YN++ING ++ + D++TYN LI G C K +A F
Sbjct: 341 PNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQF 400
Query: 337 SFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
+ + N +T++ LI C + + EL K MI G P+ T+ +L+++F +
Sbjct: 401 VKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCR 460
Query: 397 KCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ ++ MV + + +T V + L +G
Sbjct: 461 NEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 3/213 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I+ C+ KL EA VF + PN VT+N +I+ + G ++A + E
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFY---ED 368
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M I+ D +TYN LI G CK K A + E+ ++++VPN T++ LI G ++
Sbjct: 369 MVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ F L M++ G N +N ++ D +G S ++ MV IP D T
Sbjct: 429 ADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQ 488
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
+ GL G K ++ ++++F++
Sbjct: 489 VCNGLKHQGKDQLVKKLLQEMEGKKFLQESFNN 521
>AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587298-23588220 FORWARD
Length = 257
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 125/241 (51%), Gaps = 4/241 (1%)
Query: 166 MVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNN 225
M + I D + + LC++GN A +++ E + + ++N +I+ C S
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 226 LSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNS 285
S A QLL M + + PDIVTF +LI+ KE V A ++Y++M++ P + YNS
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 286 VINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAG 344
+I+G CK++ DV+T++TLINGYC + ++D M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 345 IAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVI 404
I AN TY TLI+ C++G + A++L+ MI G PDYIT+ ++ CS +E+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL---CSKKELR 237
Query: 405 K 405
K
Sbjct: 238 K 238
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 126/249 (50%), Gaps = 3/249 (1%)
Query: 28 IWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLT 87
I +VV I+D CK G A + ++M ++ P+ +TYNC+I FC G+ +
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIF---PNVLTYNCMIDSFCHSGRWS 62
Query: 88 MAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVI 147
A++L M+EK I P++ T++ LI+ + + R + EA + EM++ + ++ YN++I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 148 HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI 207
+ ++ ++ SM PD T+S L G C+ V+ + ++ ++
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 208 EDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQV 267
+ ++ LI+ C+ +L A+ LL M G+ PD +TF ++ G C + + A +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 268 YEKMMKSGE 276
E + KS +
Sbjct: 243 LEDLQKSED 251
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 32/226 (14%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM--- 58
++ LCK+ + A ++F + GI+PNV+T+N +ID C G A +++ M
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 59 -----------------------------EVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
+ M +SI P +ITYN +I GFCK ++ A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
+++ + M K P+V T++TLI+GY +A+ ++ + EM ++G+V N+V Y T+IH
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
GD++ L++ M+ + PD T+ + GLC + +AF
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 36/276 (13%)
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M I+ D + ++ CK G A+ L EM EK I PNV TY +ID + +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHS-- 58
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
G L+ M++ +I PD T+S
Sbjct: 59 ---------------------------------GRWSDADQLLRHMIEKQINPDIVTFSA 85
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + V+EA + + ++L ++ ++N +I+ C+ + + AK++L SM +G
Sbjct: 86 LINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG 145
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
PD+VTF +LI+G+CK V+N ++++ +M + G N V Y ++I+G C+
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 205
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFA 335
+ D IT++ ++ G C+ ++ +AFA
Sbjct: 206 DLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFA 241
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 1/215 (0%)
Query: 216 LINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
+++ LC+ N A+ L M+ +G+ P+++T+ +ID C G +A Q+ M++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 276 EKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAF 334
P++V ++++IN KE ++F ITYN++I+G+C ++D+A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 335 AFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
+M + G + + T++TLIN CK + E+ M +G V + +TYT LI F
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 395 SKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
+ + L + M+ GV P T+ +++ L
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGN 190
M + + + VI ++ L +G+ L + M + I P+ TY+ + C +G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 191 VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGS 250
++A + ++E + D + + LIN + +S A+++ M + P +T+ S
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 251 LIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN 310
+IDG CK+ V++A ++ + M G P++V ++++ING CK +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 311 LF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
+ + +TY TLI+G+C G +D A M + G+A ++ T++ ++ LC +++A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 1/191 (0%)
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
D+V +++D CK+GN NA ++ +M + G PN++ YN +I+ C
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 68
Query: 304 XXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKL 362
+ D++T++ LIN + K+ EA M I TYN++I+ CK
Sbjct: 69 RHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQ 128
Query: 363 GHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
+ AK ++ M +G PD +T++ LI + K + +++ M +G++ + TY
Sbjct: 129 DRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 423 KAVVSPLLQEG 433
++ Q G
Sbjct: 189 TTLIHGFCQVG 199
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%), Gaps = 3/147 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ +I A KE K+ EA ++ L+ I+P +T+N +ID CK +D A ++ ++
Sbjct: 84 SALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM---LDS 140
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M+ PD +T++ LI G+CK ++ ++ EM + IV N TY TLI G+ +
Sbjct: 141 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 200
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVI 147
L+ A L +EM+ G+ + + ++ ++
Sbjct: 201 LDAAQDLLNEMISCGVAPDYITFHCML 227
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ +I CK ++ M +F + GI N VT+ +I C++G +D A ++++M
Sbjct: 154 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS 213
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
V PD IT++C++ G C +L A
Sbjct: 214 CGVA---PDYITFHCMLAGLCSKKELRKA 239
>AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:360918-363050 REVERSE
Length = 710
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 183/429 (42%), Gaps = 83/429 (19%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
E++ +F + GI P+V+TFN ++ + K G +A + +M Y + PDS T+N
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR--RTYGVTPDSYTFN 213
Query: 75 CLIGGFCK-----------------------------------MGKLTMAEKLKNEMMEK 99
LI GFCK GK+ +A + + M++K
Sbjct: 214 TLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKK 273
Query: 100 --DIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME 157
D+ PNV +Y TL+ GY + ++EA + +M+ +GL N+V YNT+I L +
Sbjct: 274 ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYD 333
Query: 158 GVSLLISSMVD--NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI 215
+ ++ D PD T++IL K C G+++ A K ++L L D+ S+++
Sbjct: 334 EIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSV 393
Query: 216 LINYLCRSNNLSGAKQLLASMYVRGLV-------PDIVTFGSLIDGHCKEGNVENAVQVY 268
LI LC N A+ L ++ + ++ P + + + C G + A +V+
Sbjct: 394 LIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVF 453
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG 328
++MK G + D +Y TLI G+C G
Sbjct: 454 RQLMKRGVQ-----------------------------------DPPSYKTLITGHCREG 478
Query: 329 KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYT 388
K A+ M + TY LI+ L K+G A + ++ M+ ++P T+
Sbjct: 479 KFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFH 538
Query: 389 ILITSFSKK 397
++ +K+
Sbjct: 539 SVLAELAKR 547
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 184/411 (44%), Gaps = 23/411 (5%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
FN +I G ++K+ M+ M I P +T+N L+ K G+ MA L +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMG---ISPSVLTFNSLLSILLKRGRTGMAHDLFD 197
Query: 95 EMMEK-DIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
EM + P+ T+ TLI+G+ + ++EAFR+ +M + V YNT+I L
Sbjct: 198 EMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRA 257
Query: 154 GDMEGVSLLISSMVD--NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAF 211
G ++ ++S M+ + P+ +Y+ L +G C ++EA +L L +A
Sbjct: 258 GKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAV 317
Query: 212 SHNILINYLCRSNNLSGAKQLL--ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
++N LI L ++ K +L + PD TF LI HC G+++ A++V++
Sbjct: 318 TYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQ 377
Query: 270 KMMKSGEKPNLVLYNSVINGLC-KEEXXXXXXXXXXXXXXMNLFD-------VITYNTLI 321
+M+ P+ Y+ +I LC + E L YN +
Sbjct: 378 EMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMF 437
Query: 322 NGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFV 381
C +GK +A + G+ + +Y TLI C+ G + A EL+ +M+ + FV
Sbjct: 438 EYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYELLVLMLRREFV 496
Query: 382 PDYITYTILITSFSKKCSPEEVIKLHD---YMVLKGVIPHKQTYKAVVSPL 429
PD TY +LI K E + HD M+ +P T+ +V++ L
Sbjct: 497 PDLETYELLIDGLLK---IGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 544
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 150/305 (49%), Gaps = 19/305 (6%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I CK + EA +F + P+VVT+N IID C+ G + +A V+S M +
Sbjct: 213 NTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGM-L 271
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ P+ ++Y L+ G+C ++ A + ++M+ + + PN TY TLI G S A
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 121 LEEAFRLCDEMMKKG------LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPD 174
+E +++ G ++ +N +I G ++ + M++ ++ PD
Sbjct: 332 YDE----IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPD 387
Query: 175 KFTYSILTKGLCRNGNVNEAFKFHSKILENNLI--ED-----AFSHNILINYLCRSNNLS 227
+YS+L + LC + A +++ E ++ +D A ++N + YLC +
Sbjct: 388 SASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTK 447
Query: 228 GAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI 287
A+++ + RG V D ++ +LI GHC+EG + A ++ M++ P+L Y +I
Sbjct: 448 QAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLI 506
Query: 288 NGLCK 292
+GL K
Sbjct: 507 DGLLK 511
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 187/449 (41%), Gaps = 86/449 (19%)
Query: 34 TFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLK 93
+F ++++ + +++A + +E S ++ +N LI + G + KL
Sbjct: 102 SFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLF 161
Query: 94 NEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
M + I P+V T+ +L+ + A L DEM +
Sbjct: 162 QTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR-------------------- 201
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
GV+ PD +T++ L G C+N V+EAF+ + + D ++
Sbjct: 202 --TYGVT------------PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTY 247
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRG--LVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
N +I+ LCR+ + A +L+ M + + P++V++ +L+ G+C + ++ AV V+ M
Sbjct: 248 NTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM 307
Query: 272 MKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-----DVITYNTLINGYCN 326
+ G KPN V YN++I GL E + F D T+N LI +C+
Sbjct: 308 LSRGLKPNAVTYNTLIKGL--SEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCD 365
Query: 327 SGKIDEAFAFSFAMKNAGIAANHATYNTLIN----------------------------- 357
+G +D A M N + + A+Y+ LI
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDE 425
Query: 358 -------------FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVI 404
+LC G +QA+++ + ++ +G V D +Y LIT ++ +
Sbjct: 426 CKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAY 484
Query: 405 KLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+L M+ + +P +TY+ ++ LL+ G
Sbjct: 485 ELLVLMLRREFVPDLETYELLIDGLLKIG 513
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 30/241 (12%)
Query: 210 AFSHN-----ILINYLCRSNNLSGAKQLLASMYVR--GLVP-DIVTFGSLIDGHCKEGNV 261
FSH +++ +L R+ NL+ A+ L S+ R G V F SLI + G
Sbjct: 95 GFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLF 154
Query: 262 ENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVI------ 315
+ +V++++ M + G P+++ +NS+++ L K +LFD +
Sbjct: 155 QESVKLFQTMKQMGISPSVLTFNSLLSILLKR---------GRTGMAHDLFDEMRRTYGV 205
Query: 316 -----TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
T+NTLING+C + +DEAF M+ + TYNT+I+ LC+ G ++ A
Sbjct: 206 TPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHN 265
Query: 371 LMKVMILQG--FVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSP 428
++ M+ + P+ ++YT L+ + K +E + + M+ +G+ P+ TY ++
Sbjct: 266 VLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG 325
Query: 429 L 429
L
Sbjct: 326 L 326
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 147/378 (38%), Gaps = 48/378 (12%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKV-VSKMEV 60
++ C + ++ EA+ VF+ L G+ PN VT+N +I + D + + +
Sbjct: 286 TLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDA 345
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ ++ PD+ T+N LI C G L A K+ EM+ + P+ +Y+ LI
Sbjct: 346 FTTFA--PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403
Query: 121 LEEAFRLCDEMMKKGLVMN-------SVIYNTVIHWLYVEGDMEGVSLLISSMVDNRI-- 171
+ A L +E+ +K +++ + YN + +L G + + ++ +
Sbjct: 404 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQD 463
Query: 172 PPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQ 231
PP +Y L G CR G A++ +L + D ++ +LI+ L + A
Sbjct: 464 PP---SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHD 520
Query: 232 LLASMYVRGLVPDIVTFGSLIDGHCKE-------------------GNVENAVQVYEKMM 272
L M +P TF S++ K N++ + QV +
Sbjct: 521 TLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLF 580
Query: 273 KSGEKPN-------------LVLYNSVINGLCK-EEXXXXXXXXXXXXXXMNLFDVITYN 318
S +K LV ++ LC+ + + D+ T N
Sbjct: 581 SSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCN 640
Query: 319 TLINGYCNSGKIDEAFAF 336
T+I G C + EAF+
Sbjct: 641 TVIEGLCKHKRHSEAFSL 658
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 130/326 (39%), Gaps = 37/326 (11%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLAL----KVVS 56
N++I A C L AM VF L + P+ +++++I C D A ++
Sbjct: 357 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE 416
Query: 57 KMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYS 116
K ++ +P + YN + C GK AEK+ ++M++ V + +Y TLI G+
Sbjct: 417 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHC 475
Query: 117 RARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKF 176
R + A+ L M+++ V + Y +I L G+ + M+ + P
Sbjct: 476 REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 535
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNLI-------------------EDAF------ 211
T+ + L + NE+F + +LE + E AF
Sbjct: 536 TFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLL 595
Query: 212 -------SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA 264
L+ YLC + L A L+ + + DI T ++I+G CK A
Sbjct: 596 YDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEA 655
Query: 265 VQVYEKMMKSGEKPNLVLYNSVINGL 290
+Y ++++ G L + + N L
Sbjct: 656 FSLYNELVELGNHQQLSCHVVLRNAL 681
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 172/356 (48%), Gaps = 4/356 (1%)
Query: 74 NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK 133
+ +I + GK+T+A+++ V ++ LI Y R+ EEA + + M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 134 KGLVMNSVIYNTVIHWLYVEG-DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
GL N V YN VI G + + V+ M N + PD+ T++ L +C G +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLW 355
Query: 193 EAFKFHSKILENNLIE-DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
EA + + N IE D FS+N L++ +C+ + A ++LA M V+ ++P++V++ ++
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
IDG K G + A+ ++ +M G + V YN++++ K + +
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 312 F-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
DV+TYN L+ GY GK DE MK + N TY+TLI+ K G ++A E
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
+ + G D + Y+ LI + K + L D M +G+ P+ TY +++
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 37/313 (11%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
EA+SVF ++G+ PN+VT+N +ID AC G M+ +V + M ++PD IT+N
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVID-ACGKGGMEFK-QVAKFFDEMQRNGVQPDRITFN 343
Query: 75 CLI-----GGF------------------------------CKMGKLTMAEKLKNEMMEK 99
L+ GG CK G++ +A ++ +M K
Sbjct: 344 SLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403
Query: 100 DIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGV 159
I+PNV +Y+T+IDG+++A +EA L EM G+ ++ V YNT++ G E
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 160 SLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINY 219
++ M I D TY+ L G + G +E K +++ +++ + +++ LI+
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 220 LCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPN 279
+ A ++ GL D+V + +LID CK G V +AV + ++M K G PN
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 280 LVLYNSVINGLCK 292
+V YNS+I+ +
Sbjct: 584 VVTYNSIIDAFGR 596
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 177/400 (44%), Gaps = 38/400 (9%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ +I L + K+ A +F + G V F+ +I + G + A+ V + M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 61 MSVYSIRPDSITYNCLIGGFCKMG-KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
Y +RP+ +TYN +I K G + K +EM + P+ T+ +L+ SR
Sbjct: 297 ---YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
E A L DEM + + + YNT++ + G M+ +++ M RI P+ +YS
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ G + G +EA ++ + D S+N L++ + A +L M
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+ D+VT+ +L+ G+ K+G + +V+ +M + PNL
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL------------------- 514
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+TY+TLI+GY G EA K+AG+ A+ Y+ LI+ L
Sbjct: 515 ---------------LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCS 399
CK G + A L+ M +G P+ +TY +I +F + +
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 151/346 (43%), Gaps = 60/346 (17%)
Query: 4 IYALCKECKLLEAM-SVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+ A+C L EA ++F I +V ++N ++D CK G MDLA +++++M V
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
I P+ ++Y+ +I GF K G+ A L EM I + +Y TL+ Y++ E
Sbjct: 405 ---IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
EA + EM G+ + V YN ++ +G + V + + M + P+ TYS L
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
G + G EA + + L D ++ LI+ LC++ + A L+ M G+
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGIS 581
Query: 243 PDIVTF----------------------GSL------------IDGH------------- 255
P++VT+ GSL +G+
Sbjct: 582 PNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTES 641
Query: 256 -------CKEGNVENA--VQVYEKMMKSGEKPNLVLYNSVINGLCK 292
C+EG E + ++V+ KM + KPN+V +++++N +
Sbjct: 642 NNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSR 687
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 24/292 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ VI K + EA+++F GI + V++N ++ + K+G + AL ++ +M
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ I+ D +TYN L+GG+ K GK +K+ EM + ++PN+ TY+TLIDGYS+
Sbjct: 473 VG---IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+EA + E GL + V+Y+ +I L G + LI M I P+ TY+
Sbjct: 530 YKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 181 LTKGLCRNGNVNEA--------FKFHSKIL------ENNLIEDAFSH-----NILINYLC 221
+ R+ ++ + F S L E N + F N C
Sbjct: 590 IIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDC 649
Query: 222 RS--NNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
LS ++ M+ + P++VTF ++++ + + E+A + E++
Sbjct: 650 EEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 32/190 (16%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDL---------- 50
+ +I ALCK + A+S+ K GI PNVVT+N IID + MD
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSL 612
Query: 51 -----ALKVVSKMEVMSVYSI-------RPDSITYNCLIGGFCKMGKLTMAEKLKNEMME 98
AL +++ E V + + T +C G M +L+ ++ +M +
Sbjct: 613 PFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEG----MQELSCILEVFRKMHQ 668
Query: 99 KDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEG 158
+I PNV T++ +++ SR S E+A L +E+ + ++ +Y V+H L + G E
Sbjct: 669 LEIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNKVYG-VVHGLLM-GQREN 722
Query: 159 VSLLISSMVD 168
V L S+ D
Sbjct: 723 VWLQAQSLFD 732
>AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8362672-8364753 FORWARD
Length = 693
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 186/376 (49%), Gaps = 8/376 (2%)
Query: 24 LKH-GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCK 82
+KH GI P++V F + ID CK G + A V+ K+++ + I DS++ + +I GFCK
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL---FGISQDSVSVSSVIDGFCK 353
Query: 83 MGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVI 142
+GK A KL + + PN+ Y++ + + A + E+ + GL+ + V
Sbjct: 354 VGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 143 YNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKIL 202
Y T+I G + +++ + PP T +IL R G++++A +
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 203 ENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVE 262
L D ++N L++ +++ L+ +L+ M G+ PD+ T+ LI G ++
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 263 NAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLI 321
A ++ ++++ G P+ + + VI G K + + DV+T + L+
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 322 NGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFV 381
+GYC + ++++A + +AG+ + YNTLI+ C +G I++A EL+ +M+ +G +
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 382 PDYITYTILITSFSKK 397
P+ T+ L+ K
Sbjct: 651 PNESTHHALVLGLEGK 666
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 180/378 (47%), Gaps = 9/378 (2%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
F+++ID + +++ALK+ K++ ++ R I+ L+ ++ L +A +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCIS---LLKEILRVHGLELAREFVE 260
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG 154
M+ + N + I Y ++ + L M G+ + V + I L G
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 155 DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKF-HSKILENNLIEDAFSH 213
++ + ++ + I D + S + G C+ G EA K HS L N+ F +
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNI----FVY 376
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
+ ++ +C + ++ A + ++ GL+PD V + ++IDG+C G + A Q + ++K
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 274 SGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDE 332
SG P+L +I + L DV+TYN L++GY + ++++
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 333 AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
F M++AGI+ + ATYN LI+ + G+I +A E++ +I +GFVP + +T +I
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 393 SFSKKCSPEEVIKLHDYM 410
FSK+ +E L YM
Sbjct: 557 GFSKRGDFQEAFILWFYM 574
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 178/404 (44%), Gaps = 7/404 (1%)
Query: 24 LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
L G N ++ I C G D +++ M+ Y IRPD + + I CK
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH---YGIRPDIVAFTVFIDKLCKA 319
Query: 84 GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIY 143
G L A + ++ I + + +++IDG+ + EEA +L L N +Y
Sbjct: 320 GFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVY 376
Query: 144 NTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILE 203
++ + + GDM S + + + + PD Y+ + G C G ++AF++ +L+
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 204 NNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVEN 263
+ + ILI R ++S A+ + +M GL D+VT+ +L+ G+ K +
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 264 AVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLIN 322
++ ++M +G P++ YN +I+ + + + +I
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 323 GYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
G+ G EAF F M + + + T + L++ CK +++A L ++ G P
Sbjct: 557 GFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 383 DYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
D + Y LI + E+ +L MV +G++P++ T+ A+V
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 146/296 (49%), Gaps = 10/296 (3%)
Query: 1 NVVIYA-----LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
N+ +Y+ +C +L A ++F + G+ P+ V + +ID C +G D A +
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFC-KMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDG 114
+ + S P S+T + ++ G C + G ++ AE + M + + +V TY L+ G
Sbjct: 432 GAL----LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 115 YSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPD 174
Y + L + F L DEM G+ + YN +IH + V G ++ + +IS ++ P
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 175 KFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLA 234
++ + G + G+ EAF + + + D + + L++ C++ + A L
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFN 607
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
+ GL PD+V + +LI G+C G++E A ++ M++ G PN +++++ GL
Sbjct: 608 KLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 41/326 (12%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
V I LCK L EA SV ++ GI + V+ + +ID CK+G + A+K++
Sbjct: 310 TVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS--- 366
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY----- 115
+ +RP+ Y+ + C G + A + E+ E ++P+ Y T+IDGY
Sbjct: 367 ---FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGR 423
Query: 116 ------------------------------SRARSLEEAFRLCDEMMKKGLVMNSVIYNT 145
SR S+ +A + M +GL ++ V YN
Sbjct: 424 TDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNN 483
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
++H + V LI M I PD TY+IL + G ++EA + S+++
Sbjct: 484 LMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRG 543
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
+ + +I + + A L M + PD+VT +L+ G+CK +E A+
Sbjct: 544 FVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAI 603
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLC 291
++ K++ +G KP++VLYN++I+G C
Sbjct: 604 VLFNKLLDAGLKPDVVLYNTLIHGYC 629
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 153/365 (41%), Gaps = 43/365 (11%)
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
SI +C I + K+ MA KL ++ + I P+ +L+ R LE A +
Sbjct: 205 SILIDCCI----RERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
M+ +G +N+ + S+ + C +G
Sbjct: 261 HMLSRGRHLNAAVL-----------------------------------SLFIRKYCSDG 285
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
++ ++ + + D + + I+ LC++ L A +L + + G+ D V+
Sbjct: 286 YFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVS 345
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM 309
S+IDG CK G E A+++ +PN+ +Y+S ++ +C +
Sbjct: 346 SVIDGFCKVGKPEEAIKLIHSFRL---RPNIFVYSSFLSNICSTGDMLRASTIFQEIFEL 402
Query: 310 NLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
L D + Y T+I+GYCN G+ D+AF + A+ +G + T LI + G I A
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Query: 369 KELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSP 428
+ + + M +G D +TY L+ + K +V +L D M G+ P TY ++
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 429 LLQEG 433
++ G
Sbjct: 523 MVVRG 527
>AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13490251-13491458 FORWARD
Length = 369
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 166/349 (47%), Gaps = 4/349 (1%)
Query: 24 LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
+K GI P++VT + +++ C ++ A+ V +ME M I+ D + LI CK
Sbjct: 5 MKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMG---IKRDVVVDTILIDTLCKN 61
Query: 84 GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIY 143
+ A ++ M ++ I PNV TY++LI G ++ L +A R EM K + N + +
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 144 NTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILE 203
+ +I G + V + M+ I P+ FTYS L GLC + V+EA K ++
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 204 NNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVEN 263
+ +++ L N +S+ + +LL M RG+ + V+ +LI G+ + G ++
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 241
Query: 264 AVQVYEKMMKSGEKPNLVLYNSVINGL-CKEEXXXXXXXXXXXXXXMNLFDVITYNTLIN 322
A+ V+ M +G PN+ YN V+ GL E N D+ITY +I+
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH 301
Query: 323 GYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
G C + + EA+ + +K + + Y +I L + G +A L
Sbjct: 302 GMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 168/347 (48%), Gaps = 9/347 (2%)
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGL----VMNSVIYNTVIHWL 150
+MM+ I P++ T ++L++G+ + S+++A + +M K G+ V+++++ +T+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
V +E ++ M D I P+ TYS L GLC++G + +A + ++ + +
Sbjct: 63 LVVPALE----VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 118
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
+ + LI+ + LS + M + P++ T+ SLI G C V+ A+++ +
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGK 329
M+ G PN+V Y+++ NG K + + ++ NTLI GY +GK
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Query: 330 IDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
ID A M + G+ N +YN ++ L G +++A + M D ITYTI
Sbjct: 239 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 298
Query: 390 LITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGVET 436
+I K C +E L + K V P + Y +++ L + G+ T
Sbjct: 299 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRT 345
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 147/288 (51%), Gaps = 19/288 (6%)
Query: 1 NVVIYA-----LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
NVV Y+ LCK +L +A + I PNV+TF+ +ID K G + KV
Sbjct: 82 NVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLS---KVD 138
Query: 56 SKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
S ++M SI P+ TY+ LI G C ++ A K+ + M+ K PNV TY+TL +G+
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
++ +++ +L D+M ++G+ N+V NT+I + G ++ + M N + P+
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Query: 176 FTYSILTKGLCRNGNVNEAF-KF-HSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
+Y+I+ GL NG V +A +F H + N+L D ++ I+I+ +C++ + A L
Sbjct: 259 RSYNIVLAGLFANGEVEKALSRFEHMQKTRNDL--DIITYTIMIHGMCKACMVKEAYDLF 316
Query: 234 ASMYVRGLVPDIVTFGSLI-----DGHCKEGNVENAVQVYEKMMKSGE 276
+ + + PD + +I G E + N + Y+K ++ E
Sbjct: 317 YKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALN--RFYQKHVRQNE 362
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 3/289 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
++I LCK ++ A+ V R GI PNVVT++ +I CK G + A + ++ M
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAER---RLHEM 109
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
I P+ IT++ LI + K GKL+ + + M++ I PNV TY++LI G +
Sbjct: 110 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 169
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+EA ++ D M+ KG N V Y+T+ + + ++ L+ M + + + + L
Sbjct: 170 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 229
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
KG + G ++ A + N LI + S+NI++ L + + A M
Sbjct: 230 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 289
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
DI+T+ +I G CK V+ A ++ K+ +P+ Y +I L
Sbjct: 290 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAEL 338
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 166/394 (42%), Gaps = 39/394 (9%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
K+ AMS+F G PN+ TFN I + G +K+ ++ V + PD +
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG---LSPDIV 455
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
T+N L+ F + G + + EM VP T+ TLI YSR S E+A + M
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY------------- 178
+ G+ + YNTV+ L G E +++ M D R P++ TY
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 179 ------------------SILTKGL---CRNGNV-NEAFKFHSKILENNLIEDAFSHNIL 216
++L K L C ++ EA + S++ E D + N +
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 217 INYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE 276
++ R ++ A +L M RG P + T+ SL+ H + + + ++ +++ G
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 277 KPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFA 335
KP+++ YN+VI C+ + DVITYNT I Y +EA
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 336 FSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
M G N TYN++++ CKL +AK
Sbjct: 756 VVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 185/398 (46%), Gaps = 22/398 (5%)
Query: 49 DLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTY 108
DLAL+ Y D+ +I K G+++ A + N + E +V +Y
Sbjct: 152 DLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSY 211
Query: 109 ATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG-DMEGVSLLISSMV 167
+LI ++ + EA + +M + G + YN +++ G ++ L+ M
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 168 DNRIPPDKFTYSILTKGLCRNGNVN-EAFKFHSKILENNLIEDAFSHNILINYLCRSNNL 226
+ I PD +TY+ L C+ G+++ EA + ++ D ++N L++ +S+
Sbjct: 272 SDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 227 SGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSV 286
A ++L M + G P IVT+ SLI + ++G ++ A+++ +M + G KP++ Y ++
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 287 INGLCKEEXXXXXXXXXXXXXXMNLFD----------VITYNTLINGYCNSGKIDEAFAF 336
++G + M++F+ + T+N I Y N GK E
Sbjct: 391 LSGFER---------AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 337 SFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
+ G++ + T+NTL+ + G + + K M GFVP+ T+ LI+++S+
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Query: 397 KCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
S E+ + ++ M+ GV P TY V++ L + G+
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 194/464 (41%), Gaps = 46/464 (9%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I A + EA++VF + + G P ++T+N+I++V KMG K+ S +E M
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP--WNKITSLVEKMK 271
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTM---------------------------------- 88
I PD+ TYN LI CK G L
Sbjct: 272 SDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 89 --AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
A K+ NEM+ P++ TY +LI Y+R L+EA L ++M +KG + Y T+
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
+ G +E + M + P+ T++ K G E K +I L
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
D + N L+ ++ S + M G VP+ TF +LI + + G+ E A+
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVITYNTLIN 322
VY +M+ +G P+L YN+V+ L + E+ N +TY +L++
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN---ELTYCSLLH 567
Query: 323 GYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
Y N +I + + + + I TL+ K + +A+ + +GF P
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 383 DYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
D T +++ + ++ + + DYM +G P TY +++
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 139/292 (47%), Gaps = 3/292 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I A + +AM+V+ R L G+ P++ T+N ++ + G + + KV+++ME
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+P+ +TY L+ + ++ + L E+ I P TL+ S+
Sbjct: 553 GRC---KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 609
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L EA R E+ ++G + N+++ + + ++ M + P TY+
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNS 669
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L R+ + ++ + +IL + D S+N +I CR+ + A ++ + M G
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
+VPD++T+ + I + + E A+ V M+K G +PN YNS+++G CK
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 11/335 (3%)
Query: 110 TLIDGYSRARSLEEAFRLCDEMMKK----GLVMNSVIYNTVIHWLYVEGDMEGVSLLISS 165
+ G + + A R D MK+ ++ NSV+ +I L EG + + + +
Sbjct: 140 AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVV-AIIISMLGKEGRVSSAANMFNG 198
Query: 166 MVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR-SN 224
+ ++ D ++Y+ L +G EA K+ E+ ++N+++N +
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 225 NLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNV-ENAVQVYEKMMKSGEKPNLVLY 283
+ L+ M G+ PD T+ +LI CK G++ + A QV+E+M +G + V Y
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTY 317
Query: 284 NSVINGLCKEEXXXXXXXXXXXXXXMNLFD--VITYNTLINGYCNSGKIDEAFAFSFAMK 341
N++++ K +N F ++TYN+LI+ Y G +DEA M
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMV-LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA 376
Query: 342 NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
G + TY TL++ + G ++ A + + M G P+ T+ I + +
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFT 436
Query: 402 EVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGVET 436
E++K+ D + + G+ P T+ +++ Q G+++
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 4/192 (2%)
Query: 7 LCKECKLL-EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYS 65
+C +C LL EA F + G P++ T N ++ + G + K ++ M
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI---YGRRQMVAKANGVLDYMKERG 659
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
P TYN L+ + +E++ E++ K I P++ +Y T+I Y R + +A
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
R+ EM G+V + + YNT I + E ++ M+ + P++ TY+ + G
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Query: 186 CRNGNVNEAFKF 197
C+ +EA F
Sbjct: 780 CKLNRKDEAKLF 791
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N VIYA C+ ++ +A +F GI P+V+T+N I + A+ VV
Sbjct: 703 NTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV---RY 759
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMA----EKLKN 94
M + RP+ TYN ++ G+CK+ + A E L+N
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
>AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7624178-7626058 FORWARD
Length = 626
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 174/405 (42%), Gaps = 49/405 (12%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I A C E KL+++M + + G P+VVT +++V C G + AL+V+ ++E
Sbjct: 252 NILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVES 311
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ D + N L+ G+C +GK+ +A++ EM K +PNV TY LI GY
Sbjct: 312 KGG---KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGM 368
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDN------RIPPD 174
L+ A ++M + N +NT+I L + G + ++ M D+ RI P
Sbjct: 369 LDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP- 427
Query: 175 KFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLA 234
Y+ + G + +A +F K+ L A + + LC + K
Sbjct: 428 ---YNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYD 482
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
M G VP I+ LI + + G +E ++++ M+ G P +N+VI G CK++
Sbjct: 483 QMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQD 542
Query: 295 XXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNT 354
K+ F M G + +YN
Sbjct: 543 ----------------------------------KVMNGIKFVEDMAERGCVPDTESYNP 568
Query: 355 LINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCS 399
L+ LC G IQ+A L M+ + VPD ++ L+ S+K +
Sbjct: 569 LLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTA 613
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 151/350 (43%), Gaps = 43/350 (12%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
G+ P+ F II G L +V+S ++++S + I+P +N ++ K
Sbjct: 107 GLPPDDAIFVTIIR---GFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDID 163
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
E +MM I +V TY L+ G S + + F+L M G+ N+V+YNT+
Sbjct: 164 IAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTL 223
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
+H LC+NG V A S++ E N
Sbjct: 224 LH-----------------------------------ALCKNGKVGRARSLMSEMKEPND 248
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
+ + NILI+ C L + LL + G VPD+VT +++ C EG V A++
Sbjct: 249 V----TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALE 304
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCK-EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYC 325
V E++ G K ++V N+++ G C + L +V TYN LI GYC
Sbjct: 305 VLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYC 364
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM 375
+ G +D A MK I N AT+NTLI L G +++++M
Sbjct: 365 DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM 414
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 149/341 (43%), Gaps = 6/341 (1%)
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEK-DIVPNVRTYATLIDGYSRARSLEEAFRLCDE 130
TY L C + +L +EM + + P+ + T+I G+ RAR ++ + D
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGN 190
+ K G+ + ++N+++ L E M+ + I D +TY IL KGL
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 191 VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGS 250
+ + FK + + + +A +N L++ LC++ + A+ L++ M P+ VTF
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNI 253
Query: 251 LIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE-EXXXXXXXXXXXXXXM 309
LI +C E + ++ + EK G P++V V+ LC E
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Query: 310 NLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
DV+ NTL+ GYC GK+ A F M+ G N TYN LI C +G + A
Sbjct: 314 GKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSAL 373
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYM 410
+ M ++ T+ LI S ++ +K+ + M
Sbjct: 374 DTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM 414
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 174/405 (42%), Gaps = 12/405 (2%)
Query: 25 KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMG 84
K GI P++ FN I+DV K +D+A + ++ M I D TY L+ G
Sbjct: 140 KFGIKPSLKVFNSILDVLVKED-IDIAREFFTRK--MMASGIHGDVYTYGILMKGLSLTN 196
Query: 85 KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYN 144
++ KL M + PN Y TL+ + + A L EM + N V +N
Sbjct: 197 RIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP----NDVTFN 252
Query: 145 TVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
+I E + +L+ PD T + + + LC G V+EA + ++
Sbjct: 253 ILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESK 312
Query: 205 NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA 264
D + N L+ C + A++ M +G +P++ T+ LI G+C G +++A
Sbjct: 313 GGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSA 372
Query: 265 VQVYEKMMKSGEKPNLVLYNSVINGLC---KEEXXXXXXXXXXXXXXMNLFDVITYNTLI 321
+ + M + N +N++I GL + + ++ + YN +I
Sbjct: 373 LDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVI 432
Query: 322 NGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFV 381
G+ + ++A F M+ A ++ LI+ LC+ G + K MI +G V
Sbjct: 433 YGFYKENRWEDALEFLLKMEKLFPRAVDRSFK-LIS-LCEKGGMDDLKTAYDQMIGEGGV 490
Query: 382 PDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
P I LI +S+ EE ++L + MV +G +P T+ AV+
Sbjct: 491 PSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVI 535
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 15/268 (5%)
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
+P D ++ +G + E F++ S I ++ L + LC
Sbjct: 40 VPSDDHIVRLILDQKSASGAL-ETFRWASTF--PGFIHSRSTYRALFHKLCVFRRFDTVY 96
Query: 231 QLLASMYVR-GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING 289
QLL M GL PD F ++I G + ++ + V + + K G KP+L ++NS+++
Sbjct: 97 QLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDV 156
Query: 290 LCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAAN 348
L KE+ + DV TY L+ G + +I + F MK +G+A N
Sbjct: 157 LVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPN 216
Query: 349 HATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIK--- 405
YNTL++ LCK G + +A+ LM M P+ +T+ ILI+++ C+ +++I+
Sbjct: 217 AVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAY---CNEQKLIQSMV 269
Query: 406 LHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
L + G +P T V+ L EG
Sbjct: 270 LLEKCFSLGFVPDVVTVTKVMEVLCNEG 297
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 192/408 (47%), Gaps = 10/408 (2%)
Query: 16 AMSVF-YRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
A+ VF + +L+H PN I+ V + LA+++ ++ E ++ YN
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQ----VYN 229
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEE--AFRLCDEMM 132
++G + + GK + A++L + M ++ VP++ ++ TLI+ ++ L A L D +
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
GL +++ YNT++ + +++G + M +R PD +TY+ + R G
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA 349
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
EA + ++ DA ++N L+ R N K++ M G D +T+ ++I
Sbjct: 350 EAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 409
Query: 253 DGHCKEGNVENAVQVYEKMMK-SGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
+ K+G ++ A+Q+Y+ M SG P+ + Y +I+ L K + +
Sbjct: 410 HMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGI 469
Query: 312 FDVI-TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
+ TY+ LI GY +GK +EA M +G ++ Y+ +++ L + ++A
Sbjct: 470 KPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWG 529
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIK-LHDYMVLKGVIP 417
L + MI G P Y Y ++I K+ +++ K + D L G+ P
Sbjct: 530 LYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 158/339 (46%), Gaps = 4/339 (1%)
Query: 98 EKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM- 156
E + V+ Y ++ YSR+ +A L D M ++G V + + +NT+I+ G +
Sbjct: 218 EPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLT 277
Query: 157 EGVSLLISSMVDNR-IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI 215
+++ + MV N + PD TY+ L R+ N++ A K + + D +++N
Sbjct: 278 PNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNA 337
Query: 216 LINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
+I+ R + A++L + ++G PD VT+ SL+ +E N E +VY++M K G
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 276 EKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF--DVITYNTLINGYCNSGKIDEA 333
+ + YN++I+ K+ ++ D ITY LI+ + + EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 334 FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
A M + GI TY+ LI K G ++A++ M+ G PD + Y++++
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDV 517
Query: 394 FSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
+ + L+ M+ G P Y+ ++ L++E
Sbjct: 518 LLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKE 556
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ + K +A + + G P++++FN +I+ K G + L V +++
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNL-AVELLDM 287
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ +RPD+ITYN L+ + L A K+ +M P++ TY +I Y R
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
EA RL E+ KG ++V YN++++ E + E V + M D+ TY+
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 181 LTKGLCRNGNVNEAFKFHSKILE-NNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ + G ++ A + + + + DA ++ +LI+ L ++N A L++ M
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
G+ P + T+ +LI G+ K G E A + M++SG KP+ + Y+ +++ L +
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 176/390 (45%), Gaps = 9/390 (2%)
Query: 41 VACKMGAMDLALKVVSKMEVMSV-YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEK 99
V CK+G + A +VV++ E ++ P Y +I + K AE + + +
Sbjct: 725 VYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQS 781
Query: 100 DIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGV 159
P+++T+ +L+ Y++ E A + + MM+ G N ++H L V+G +E +
Sbjct: 782 GRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEEL 841
Query: 160 SLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINY 219
+++ + D K + ++ R GN+ E K +S + + + ++I
Sbjct: 842 YVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIEL 901
Query: 220 LCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPN 279
LC+ + A+ +++ M ++ + S++ + + + VQVY+++ ++G +P+
Sbjct: 902 LCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPD 961
Query: 280 LVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVI-TYNTLINGYCNSGKIDEAFAFSF 338
YN++I C++ + L + TY +LI+ + +++A
Sbjct: 962 ETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFE 1021
Query: 339 AMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKC 398
+ + G+ + + Y+T++ G +A++L+++M G P T +L+ S+S
Sbjct: 1022 ELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSG 1081
Query: 399 SPEEVIK----LHDYMVLKGVIPHKQTYKA 424
+P+E K L D V +P+ A
Sbjct: 1082 NPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 192/443 (43%), Gaps = 22/443 (4%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++YA +E + V+ + K G + +T+N II + K G +DLAL++ M+
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+S PD+ITY LI K + A L +EM++ I P ++TY+ LI GY++A
Sbjct: 431 LS--GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGK 488
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
EEA M++ G +++ Y+ ++ L + L M+ + P Y +
Sbjct: 489 REEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYEL 548
Query: 181 LTKGLC---RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
+ GL R+ ++ + + ++ N +E + ++L+ C A+QL ++
Sbjct: 549 MILGLMKENRSDDIQKTIRDMEELCGMNPLEIS---SVLVKGECFD---LAARQLKVAI- 601
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
G + T S++ + G A ++ E + + ++ ++I CK
Sbjct: 602 TNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLS 661
Query: 298 XXXXXXXXXXXMNLF---DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNT 354
++ + Y TL++ + EA ++ +G A+ + +
Sbjct: 662 AALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKS 721
Query: 355 LINFLCKLGHIQQAKELMKVMILQGF----VPDYITYTILITSFSKKCSPEEVIKLHDYM 410
++ CKLG + A +++ +GF P YT +I ++ K+ ++ + +
Sbjct: 722 MVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNL 778
Query: 411 VLKGVIPHKQTYKAVVSPLLQEG 433
G P +T+ +++S Q G
Sbjct: 779 RQSGRTPDLKTWNSLMSAYAQCG 801
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 113/275 (41%), Gaps = 32/275 (11%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME-- 59
+++ A + + E ++ G P + + M+I++ CK + A +VS+ME
Sbjct: 862 LMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA 921
Query: 60 ------------------------VMSVYS------IRPDSITYNCLIGGFCKMGKLTMA 89
+ VY + PD TYN LI +C+ +
Sbjct: 922 NFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEG 981
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
L +M + P + TY +LI + + + LE+A +L +E++ KGL ++ Y+T++
Sbjct: 982 YLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
G L+ M + I P T +L +GN EA K S + + +
Sbjct: 1042 SRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELT 1101
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD 244
++ +I+ RS + + + L M GL PD
Sbjct: 1102 TLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 124/289 (42%), Gaps = 3/289 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++++ALC + +L E V G + + +++D + G + K+ S M+
Sbjct: 826 NILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKA 885
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
P Y +I CK ++ AE + +EM E + + + +++ Y+
Sbjct: 886 AGYL---PTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIED 942
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ ++ + + GL + YNT+I + E LL+ M + + P TY
Sbjct: 943 YKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKS 1002
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + + +A + ++L L D ++ ++ S + S A++LL M G
Sbjct: 1003 LISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING 289
+ P + T L+ + GN + A +V + + + + Y+SVI+
Sbjct: 1063 IEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
>AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29068343-29069828 REVERSE
Length = 441
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 123/226 (54%), Gaps = 1/226 (0%)
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
+ PD T+N L+ G+CK+G + A++ +++ P+ TY + I G+ R + ++ AF
Sbjct: 151 VSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAF 210
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
++ EM + G N V Y +I+ L+ ++ L+ M D+ P+ TY++L L
Sbjct: 211 KVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDAL 270
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
C +G +EA ++ E+ + D + +LI C + L A LL M GL+P++
Sbjct: 271 CGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNV 330
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC 291
+T+ +LI G CK+ NV A+ + KM++ P+L+ YN++I G C
Sbjct: 331 ITYNALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQC 375
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 117/248 (47%), Gaps = 5/248 (2%)
Query: 13 LLEAMSVFYRS-LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
L+E M Y L+ + P++ TFN +++ CK+G + A + V+ + PD
Sbjct: 135 LVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGC---DPDYF 191
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
TY I G C+ ++ A K+ EM + N +Y LI G A+ ++EA L +M
Sbjct: 192 TYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKM 251
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
N Y +I L G L M ++ I PD Y++L + C +
Sbjct: 252 KDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTL 311
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
+EA +LEN L+ + ++N LI C+ N+ A LL+ M + LVPD++T+ +L
Sbjct: 312 DEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTL 370
Query: 252 IDGHCKEG 259
I G C G
Sbjct: 371 IAGQCSSG 378
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 34/257 (13%)
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
Y+ L L R G V E + ++++LE+ + D ++ N L+N C+ + AKQ + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
G PD T+ S I GHC+ V+ A +V+++M ++G N V Y +I GL
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGL------- 235
Query: 298 XXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
F+ + KIDEA + MK+ N TY LI+
Sbjct: 236 --------------FE-------------AKKIDEALSLLVKMKDDNCCPNVRTYTVLID 268
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
LC G +A L K M G PD YT+LI SF + +E L ++M+ G++P
Sbjct: 269 ALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMP 328
Query: 418 HKQTYKAVVSPLLQEGV 434
+ TY A++ ++ V
Sbjct: 329 NVITYNALIKGFCKKNV 345
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 130/328 (39%), Gaps = 72/328 (21%)
Query: 64 YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEE 123
Y + P YN L+ + G + ++L EM+E + P++ T+ TL++GY
Sbjct: 116 YKLTPK--CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYC------- 166
Query: 124 AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
K G V+ + Y + WL G PD FTY+
Sbjct: 167 ---------KLGYVVEAKQY---VTWLIQAG----------------CDPDYFTYTSFIT 198
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
G CR V+ AFK ++ +N + S+ LI L + + A LL M P
Sbjct: 199 GHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCP 258
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
++ T+ LID C G A+ ++++M +SG KP
Sbjct: 259 NVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP------------------------- 293
Query: 304 XXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLG 363
D Y LI +C+ +DEA M G+ N TYN LI CK
Sbjct: 294 ---------DDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-K 343
Query: 364 HIQQAKELMKVMILQGFVPDYITYTILI 391
++ +A L+ M+ Q VPD ITY LI
Sbjct: 344 NVHKAMGLLSKMLEQNLVPDLITYNTLI 371
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+IY L + K+ EA+S+ + PNV T+ ++ID C G A+ + + MS
Sbjct: 231 LIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQ---MS 287
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
I+PD Y LI FC L A L M+E ++PNV TY LI G+ + +++
Sbjct: 288 ESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVH 346
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVI 147
+A L +M+++ LV + + YNT+I
Sbjct: 347 KAMGLLSKMLEQNLVPDLITYNTLI 371
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
V+I ALC + EAM++F + + GI P+ + ++I C +D A + +E M
Sbjct: 265 VLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGL---LEHM 321
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY-SRARS 120
+ P+ ITYN LI GFCK + A L ++M+E+++VP++ TY TLI G S S
Sbjct: 322 LENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGIS 380
Query: 121 LEEAFRLCDEMMK 133
L E ++C+ +++
Sbjct: 381 LSE--KICNGLLR 391
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 205/472 (43%), Gaps = 57/472 (12%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ V+ A +E L EA F G P VT+N ++ V K G AL V+ +ME
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S + DS+TYN L+ + + G A + M +K ++PN TY T+ID Y +A
Sbjct: 345 NSCPA---DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG----------DMEG------------ 158
+EA +L M + G V N+ YN V+ L + DM+
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 159 -------------VSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
V+ + M PD+ T++ L R G+ +A K + ++
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
++N L+N L R + + +++ M +G P ++ ++ + K GN +
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL-GI 580
Query: 266 QVYEKMMKSGEK-PNLVLYNSVI--NGLCKEEXXXXXXXXXXXXXXMNLF-------DVI 315
+ E +K G+ P+ +L +++ N C+ LF D++
Sbjct: 581 ERIENRIKEGQIFPSWMLLRTLLLANFKCR--------ALAGSERAFTLFKKHGYKPDMV 632
Query: 316 TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM 375
+N++++ + + D+A +++ G++ + TYN+L++ + G +A+E++K +
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Query: 376 ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
PD ++Y +I F ++ +E +++ M +G+ P TY VS
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 175/398 (43%), Gaps = 8/398 (2%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
VI A K K EA+ +FY + G PN T+N ++ + K + +K++ M+
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN 450
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
P+ T+N ++ G ++ EM P+ T+ TLI Y R S
Sbjct: 451 GC---SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+A ++ EM + G YN +++ L +GD +IS M P + +YS++
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDA--FSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ + GN + ++I E + +L N+ CR+ L+G+++
Sbjct: 568 LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA--LAGSERAFTLFKKH 625
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G PD+V F S++ + + A + E + + G P+LV YNS+++ +
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 300 XXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
L D+++YNT+I G+C G + EA M GI TYNT ++
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
+G + +++++ M P+ +T+ +++ + +
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 158/366 (43%), Gaps = 35/366 (9%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR-ARSLEEAFRL 127
D Y ++ + + GK A L M E P + TY ++D + + RS + +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 128 CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR 187
DEM KGL + +TV+ EG + + + P TY+ L + +
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
G EA ++ EN+ D+ ++N L+ R+ A ++ M +G++P+ +T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXX 307
+ ++ID + K G + A++++ M ++G PN YN+V++ L K+
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS----------- 437
Query: 308 XMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQ 367
N +I C+ MK+ G + N AT+NT++ G +
Sbjct: 438 ----------NEMIKMLCD-------------MKSNGCSPNRATWNTMLALCGNKGMDKF 474
Query: 368 AKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
+ + M GF PD T+ LI+++ + S + K++ M G TY A+++
Sbjct: 475 VNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLN 534
Query: 428 PLLQEG 433
L ++G
Sbjct: 535 ALARKG 540
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 169/395 (42%), Gaps = 36/395 (9%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+++A + K +A+ +F R + G P +VT+N+I+DV KMG K++ ++ M
Sbjct: 215 TILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRS--WRKILGVLDEM 272
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
++ D T + ++ + G L A++ E+ P TY L+ + +A
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
EA + EM + +SV YN ++ G + + +I M + P+ TY+ +
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 392
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
+ G +EA K + E + + ++N +++ L + + + ++L M G
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
P+ T+ +++ +G + +V+ +M G +P
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP----------------------- 489
Query: 302 XXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
D T+NTLI+ Y G +A M AG A TYN L+N L +
Sbjct: 490 -----------DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
G + + ++ M +GF P +Y++++ ++K
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 3/177 (1%)
Query: 25 KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMG 84
KHG P++V FN ++ + + D A + +E + + PD +TYN L+ + + G
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGI---LESIREDGLSPDLVTYNSLMDMYVRRG 680
Query: 85 KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYN 144
+ AE++ + + + P++ +Y T+I G+ R ++EA R+ EM ++G+ YN
Sbjct: 681 ECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYN 740
Query: 145 TVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
T + G + +I M N P++ T+ ++ G CR G +EA F SKI
Sbjct: 741 TFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 153/383 (39%), Gaps = 24/383 (6%)
Query: 51 ALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYAT 110
+LK++ K EV+ V SI +T G + +K+E++ D+V +
Sbjct: 100 SLKLLCKKEVVLVNSIVEQPLT-----------GLSRFFDSVKSELLRTDLV-------S 141
Query: 111 LIDGYSRARSLEEAFRLCDEMM----KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSM 166
L+ G + E A L + ++ L ++ + + L E + L+ +
Sbjct: 142 LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKI 201
Query: 167 VDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR-SNN 225
D Y+ + R G +A ++ E ++N++++ + +
Sbjct: 202 PLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRS 261
Query: 226 LSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNS 285
+L M +GL D T +++ +EG + A + + ++ G +P V YN+
Sbjct: 262 WRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNA 321
Query: 286 VINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAG 344
++ K + D +TYN L+ Y +G EA M G
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 345 IAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVI 404
+ N TY T+I+ K G +A +L M G VP+ TY +++ KK E+I
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 405 KLHDYMVLKGVIPHKQTYKAVVS 427
K+ M G P++ T+ +++
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLA 464
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 126/306 (41%), Gaps = 38/306 (12%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I A + ++A ++ + G V T+N +++ + G V+S M+
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS 554
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+P +Y+ ++ + K G E+++N + E I P+ TL+ + R+
Sbjct: 555 KG---FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 121 L---EEAFRL--------------------------------CDEMMKKGLVMNSVIYNT 145
L E AF L + + + GL + V YN+
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
++ G+ ++ ++ +++ PD +Y+ + KG CR G + EA + S++ E
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
+ F++N ++ + + ++ M P+ +TF ++DG+C+ G A+
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Query: 266 QVYEKM 271
K+
Sbjct: 792 DFVSKI 797
>AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6165449-6167515 FORWARD
Length = 688
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 196/479 (40%), Gaps = 48/479 (10%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ LC ++++A + + G P+VVTF +I C++ +++A KV +M V
Sbjct: 166 NRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRV 225
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEK--------------------- 99
IRP+S+T + LIGGF KM + KL E+ E
Sbjct: 226 C---GIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSM 282
Query: 100 ----------DIVPNVR---------TYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNS 140
+I N+ Y +ID R R A R+ M KGL
Sbjct: 283 CREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRR 342
Query: 141 VIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSK 200
YN +IH L +G L+ + P ++TY +L + LC+ + +A
Sbjct: 343 TSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLEL 402
Query: 201 ILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGN 260
+L + +NI + LC +N + +L SM PD T ++I+G CK G
Sbjct: 403 MLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGR 462
Query: 261 VENAVQVYEKMMKSGE--KPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD--VIT 316
V++A++V + MM +G+ P+ V N+V+ GL + N V+
Sbjct: 463 VDDAMKVLDDMM-TGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVA 521
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
YN +I G K DEA + ++ A + A+ TY +I+ LC + AK+ +I
Sbjct: 522 YNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI 581
Query: 377 LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGVE 435
D Y + + + + G IP+ Y V++ + G++
Sbjct: 582 WPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLK 640
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 187/441 (42%), Gaps = 17/441 (3%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
VI++LC + EA F L G P+ T N+II + L V+ ++ +
Sbjct: 96 VIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRL-IGF 154
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
P YN L+ C + ++ A KL +M + +P+V T+ TLI GY R LE
Sbjct: 155 KKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELE 214
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSM-------VDNRIPPDK 175
A ++ DEM G+ NS+ + +I D+E L+ + D +
Sbjct: 215 VAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAA 274
Query: 176 FTYSILTKGLCRNGNVNEAFKFHS--KILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
F + L +CR G N+ F+ + E+ +E A+ H +I+ LCR GA +++
Sbjct: 275 F--ANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGH--MIDSLCRYRRNHGAARIV 330
Query: 234 ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
M +GL P ++ ++I G CK+G A Q+ E+ + P+ Y ++ LCKE
Sbjct: 331 YIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKE 390
Query: 294 EXXXXXXXXXXXXXXMNLFDVIT-YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
D YN + G C E +M + T
Sbjct: 391 LDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTL 450
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGF-VPDYITYTILITSFSKKCSPEEVIK-LHDYM 410
NT+IN LCK+G + A +++ M+ F PD +T ++ + EE + L+ M
Sbjct: 451 NTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVM 510
Query: 411 VLKGVIPHKQTYKAVVSPLLQ 431
+ P Y AV+ L +
Sbjct: 511 PENKIKPGVVAYNAVIRGLFK 531
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 38/320 (11%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACK---------------- 44
N +I+ LCK+ + A + + +P+ T+ ++++ CK
Sbjct: 346 NAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLR 405
Query: 45 ----------------MGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
+ MD ++++ + M RPD T N +I G CKMG++
Sbjct: 406 KEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDD 465
Query: 89 AEKLKNEMME-KDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVI-YNTV 146
A K+ ++MM K P+ T T++ G EEA + + +M + + V+ YN V
Sbjct: 466 AMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAV 525
Query: 147 IHWLYV--EGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
I L+ +GD E +S+ + + D TY+I+ GLC V+ A KF ++
Sbjct: 526 IRGLFKLHKGD-EAMSVF-GQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWP 583
Query: 205 NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA 264
+ DAF + + LC+S LS A L + G +P++V + ++I + G A
Sbjct: 584 SGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREA 643
Query: 265 VQVYEKMMKSGEKPNLVLYN 284
Q+ E+M K+G+ P+ V +
Sbjct: 644 YQILEEMRKNGQAPDAVTWR 663
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 131/322 (40%), Gaps = 43/322 (13%)
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM-EGVSLLISSMVDNRIPPDKFT 177
R+ +EA R+ D + +G +S+ ++VIH L G E + + IP ++
Sbjct: 69 RNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTC 128
Query: 178 YSILTKGLCRNGNVNEAFKFHSKI-LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
I+ + L V+ H I + + ++N L+N LC + A +L+ M
Sbjct: 129 NVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDM 188
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK---- 292
RG +PD+VTF +LI G+C+ +E A +V+++M G +PN + + +I G K
Sbjct: 189 RNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDV 248
Query: 293 -----------EEXXXXXXXXXXXXXXMNLFDVI-------------------------- 315
E NL D +
Sbjct: 249 ETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEF 308
Query: 316 TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM 375
Y +I+ C + A + MK+ G+ +YN +I+ LCK G +A +L++
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 376 ILQGFVPDYITYTILITSFSKK 397
F P TY +L+ S K+
Sbjct: 369 SEFEFFPSEYTYKLLMESLCKE 390
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 185/409 (45%), Gaps = 39/409 (9%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
+A V+ + G ++ +NM++D K K E M R D TY
Sbjct: 221 KAFDVYCEIRRGGHKLDIFAYNMLLDALAK------DEKACQVFEDMKKRHCRRDEYTYT 274
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
+I ++GK A L NEM+ + + NV Y TL+ ++ + +++A ++ M++
Sbjct: 275 IMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVET 334
Query: 135 GLVMNSVIYNTVIHWLYVEGDM---EGV-------------SLLISSMVD-------NRI 171
G N Y+ +++ L EG + +GV S L+ ++ +R+
Sbjct: 335 GCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRL 394
Query: 172 PPDKFTYSI---------LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR 222
D +++ + + + LC G EA + SKI E ++ D +N + + L +
Sbjct: 395 FCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGK 454
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVL 282
+S L M G PDI T+ LI + G V+ A+ ++E++ +S KP+++
Sbjct: 455 LKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIIS 514
Query: 283 YNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMK 341
YNS+IN L K L DV+TY+TL+ + + +++ A++ M
Sbjct: 515 YNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEML 574
Query: 342 NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
G N TYN L++ L K G +A +L M QG PD ITYT+L
Sbjct: 575 VKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 149/292 (51%), Gaps = 6/292 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ L K + +A+ VF R ++ G PN T+++++++ G + +++ +E+
Sbjct: 309 NTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL---VRLDGVVEI 365
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
Y + Y+ L+ K+G ++ A +L +M + +Y ++++ A
Sbjct: 366 SKRYMTQG---IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGK 422
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
EA + ++ +KG+V ++++YNTV L + + L M + PD FTY+I
Sbjct: 423 TIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNI 482
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L R G V+EA ++ ++ D S+N LIN L ++ ++ A M +G
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG 542
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
L PD+VT+ +L++ K VE A ++E+M+ G +PN+V YN +++ L K
Sbjct: 543 LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEK 594
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 175/406 (43%), Gaps = 22/406 (5%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
+N II + + D +V S ++ M ++ + T N LIG F L M +L
Sbjct: 136 YNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL-- 193
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG 154
+ + D+ N TY L+ Y R+R +AF + E+ + G ++ YN ++ L +
Sbjct: 194 -VKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD- 251
Query: 155 DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHN 214
E + M D++TY+I+ + + R G +EA ++++ L + +N
Sbjct: 252 --EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYN 309
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGN---VENAVQVYEKM 271
L+ L + + A Q+ + M G P+ T+ L++ EG ++ V++ ++
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRY 369
Query: 272 MKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVI----TYNTLINGYCNS 327
M G +Y+ ++ L K M F V +Y +++ C +
Sbjct: 370 MTQG------IYSYLVRTLSK---LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGA 420
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
GK EA + G+ + YNT+ + L KL I +L + M G PD TY
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480
Query: 388 TILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
ILI SF + +E I + + + P +Y ++++ L + G
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 3/183 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N V AL K ++ +F + K G P++ T+N++I ++G +D A+ + ++E
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+PD I+YN LI K G + A EM EK + P+V TY+TL++ + +
Sbjct: 506 SDC---KPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+E A+ L +EM+ KG N V YN ++ L G L S M + PD TY++
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTV 622
Query: 181 LTK 183
L +
Sbjct: 623 LER 625
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 3/211 (1%)
Query: 6 ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYS 65
+LC K +EA+ + + + G+ + + +N + +G + + E M
Sbjct: 416 SLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSA---LGKLKQISHIHDLFEKMKKDG 472
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
PD TYN LI F ++G++ A + E+ D P++ +Y +LI+ + ++EA
Sbjct: 473 PSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAH 532
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
EM +KGL + V Y+T++ +E L M+ P+ TY+IL L
Sbjct: 533 VRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNIL 216
+NG EA +SK+ + L D+ ++ +L
Sbjct: 593 EKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 10/222 (4%)
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILEN----NLIEDAFSHNILINYLCRSNNLSGA 229
D F Y+ + L R+ N+ + F IL++ N+ + + NILI + + +L
Sbjct: 132 DPFLYNRIILILSRS-NLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMC 190
Query: 230 KQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING 289
+L+ L + T+ L+ + + + A VY ++ + G K ++ YN +++
Sbjct: 191 LRLVKKW---DLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA 247
Query: 290 LCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
L K+E D TY +I GK DEA M G+ N
Sbjct: 248 LAKDEKACQVFEDMKKRHCRR--DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNV 305
Query: 350 ATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
YNTL+ L K + +A ++ M+ G P+ TY++L+
Sbjct: 306 VGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL 347
>AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4731056-4733707 REVERSE
Length = 883
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/486 (24%), Positives = 194/486 (39%), Gaps = 74/486 (15%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGA----------MD- 49
NV AL K K+ EA+ +F GI P+V+ + +I C G MD
Sbjct: 400 NVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDG 459
Query: 50 ---------------------LALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
LA + +++M ++P +T+N +I G G+L
Sbjct: 460 TGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDK 519
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
AE + K + A+++ G+ A L+ AF + ++ + +Y T+
Sbjct: 520 AEAFYESLEHK----SRENDASMVKGFCAAGCLDHAF---ERFIRLEFPLPKSVYFTLFT 572
Query: 149 WLYVEGD-MEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI 207
L E D + L+ M + P+K Y L CR NV +A +F ++ ++
Sbjct: 573 SLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIV 632
Query: 208 EDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL---------------- 251
D F++ I+IN CR N A L M R + PD+VT+ L
Sbjct: 633 PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAF 692
Query: 252 ------------IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
I+ +C +++ +++ M + P++V Y ++ K E
Sbjct: 693 DVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN--KPERNLSR 750
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
DV Y LI+ C G + EA M +G+ + A Y LI
Sbjct: 751 EMKAFDVKP----DVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACC 806
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
CK+G++++AK + MI G PD + YT LI + + +KL M+ KG+ P K
Sbjct: 807 CKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTK 866
Query: 420 QTYKAV 425
+ AV
Sbjct: 867 ASLSAV 872
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 194/496 (39%), Gaps = 82/496 (16%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
++ C+ EA +F + I + V +N+ D K+G ++ A+++ +M +
Sbjct: 367 ILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM---T 423
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
I PD I Y LIGG C GK + A L EM P++ Y L G + +
Sbjct: 424 GKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQ 483
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
EAF M +G+ V +N VI L G+++ S+ D + +
Sbjct: 484 EAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMV 539
Query: 183 KGLCRNGNVNEAFK-----------------FHSKILENNLIEDAFS------------- 212
KG C G ++ AF+ F S E + I A
Sbjct: 540 KGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPE 599
Query: 213 ---HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
+ LI CR NN+ A++ + + +VPD+ T+ +I+ +C+ + A ++E
Sbjct: 600 KSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFE 659
Query: 270 KMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVIT----YNTLINGYC 325
M + KP++V Y+ ++N M FDVI Y +IN YC
Sbjct: 660 DMKRRDVKPDVVTYSVLLNS----------DPELDMKREMEAFDVIPDVVYYTIMINRYC 709
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTL----------------------------IN 357
+ + + +A MK I + TY L I+
Sbjct: 710 HLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLID 769
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
+ CK+G + +AK + MI G PD YT LI K +E + D M+ GV P
Sbjct: 770 WQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKP 829
Query: 418 HKQTYKAVVSPLLQEG 433
Y A+++ + G
Sbjct: 830 DVVPYTALIAGCCRNG 845
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 164/392 (41%), Gaps = 38/392 (9%)
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
I Y ++ G C ++ AE + +M + I P+V Y+ +I+G+ + ++ +A + +
Sbjct: 291 GIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFN 350
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
+M+KK +N VI ++++ G+ L + I D+ Y++ L + G
Sbjct: 351 KMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLG 410
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
V EA + ++ + D ++ LI C S A L+ M G PDIV +
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE-EXXXXXXXXXXXXXX 308
L G G + A + + M G KP V +N VI GL E
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Query: 309 MNLFDVITYNTLINGYCNSGKIDEAFA----FSFAMKNA--------------------- 343
D +++ G+C +G +D AF F + +
Sbjct: 531 SRENDA----SMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQD 586
Query: 344 --------GIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFS 395
G+ + Y LI C++ ++++A+E ++++ + VPD TYTI+I ++
Sbjct: 587 LLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYC 646
Query: 396 KKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
+ P++ L + M + V P TY +++
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN 678
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 134/309 (43%), Gaps = 5/309 (1%)
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
E+ + GL ++ Y V+ L+ D E + L+S ++ + Y +GLC N
Sbjct: 207 EIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQ 266
Query: 190 NVNEAFKFHSKILENNLIED----AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
+ A+ + + N++ D ++ ++ LC + A+ ++ M G+ PD+
Sbjct: 267 MTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDV 326
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXX 305
+ ++I+GH K N+ AV V+ KM+K ++ N V+ +S++ C+
Sbjct: 327 YVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKE 386
Query: 306 XXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGH 364
N+ D + YN + GK++EA M GIA + Y TLI C G
Sbjct: 387 FRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGK 446
Query: 365 IQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKA 424
A +LM M G PD + Y +L + +E + M +GV P T+
Sbjct: 447 CSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNM 506
Query: 425 VVSPLLQEG 433
V+ L+ G
Sbjct: 507 VIEGLIDAG 515
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 193/435 (44%), Gaps = 6/435 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
++ AL + + +A+SVFY++ P T+N +I + + G + +V ++M +
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM--CN 225
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
PD+ITY+ LI + K+G+ A +L +EM + + P + Y TL+ Y + +E
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+A L +EM + G Y +I L G ++ M+ + + PD + L
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSN-NLSGAKQLLASMYVRGL 241
L + G V E S++ S+N +I L S ++S M +
Sbjct: 346 NILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSV 405
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
P T+ LIDG+CK VE A+ + E+M + G P Y S+IN L K +
Sbjct: 406 SPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANE 465
Query: 302 XXXXXXXMNLFDVIT--YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
N +V + Y +I + GK+ EA MKN G + YN L++ +
Sbjct: 466 LFKELKE-NFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
K G I +A L++ M G D ++ I++ F++ P I++ + + G+ P
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDG 584
Query: 420 QTYKAVVSPLLQEGV 434
TY ++ G+
Sbjct: 585 VTYNTLLGCFAHAGM 599
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 208/443 (46%), Gaps = 28/443 (6%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHG-IWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
N VI L +E + + V+ G +P+ +T++ +I K+G D A+++ +M+
Sbjct: 201 NSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK 260
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
++P Y L+G + K+GK+ A L EM P V TY LI G +A
Sbjct: 261 D---NCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
++EA+ +M++ GL + V N +++ L G +E ++ + S M R P +Y+
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYN 377
Query: 180 ILTKGLCRN-GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ K L + +V+E + K+ +++ F+++ILI+ C++N + A LL M
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDE 437
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN--GLCKEEXX 296
+G P + SLI+ K E A ++++++ ++ + +Y +I G C +
Sbjct: 438 KGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK--- 494
Query: 297 XXXXXXXXXXXXMNLF----------DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIA 346
++LF DV YN L++G +G I+EA + M+ G
Sbjct: 495 --------LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCR 546
Query: 347 ANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKL 406
A+ ++N ++N + G ++A E+ + + G PD +TY L+ F+ EE ++
Sbjct: 547 ADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARM 606
Query: 407 HDYMVLKGVIPHKQTYKAVVSPL 429
M KG TY +++ +
Sbjct: 607 MREMKDKGFEYDAITYSSILDAV 629
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 149/403 (36%), Gaps = 76/403 (18%)
Query: 107 TYATLIDGYSRARSLEEAFRLCDE-------------------------MMKKGLVM--- 138
TY TLI AR E +R E M+ K L +
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187
Query: 139 --------NSVIYNTVIHWLYVEGDMEGVSLLISSMV-DNRIPPDKFTYSILTKGLCRNG 189
S YN+VI L EG E V + + M + PD TYS L + G
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
+ A + ++ +N + + L+ + + A L M G P + T+
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK----EEXX--------- 296
LI G K G V+ A Y+ M++ G P++V N+++N L K EE
Sbjct: 308 ELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMW 367
Query: 297 --------------XXXXXXXXXXXXMNLFDVI----------TYNTLINGYCNSGKIDE 332
+ FD + TY+ LI+GYC + ++++
Sbjct: 368 RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427
Query: 333 AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ-GFVPDYITYTILI 391
A M G A Y +LIN L K + A EL K + G V + Y ++I
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV-YAVMI 486
Query: 392 TSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
F K E + L + M +G P Y A++S +++ G+
Sbjct: 487 KHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
>AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript
processing defect 43) | chr1:28133933-28135381 FORWARD
Length = 453
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 145/276 (52%), Gaps = 4/276 (1%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
+A+ +F +HG + ++ +FN I+DV CK ++ A ++ + +S+ D++TYN
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR--GRFSV--DTVTYN 199
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
++ G+C + + A ++ EM+E+ I PN+ TY T++ G+ RA + A+ EM K+
Sbjct: 200 VILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR 259
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
++ V Y TV+H V G+++ + M+ + P TY+ + + LC+ NV A
Sbjct: 260 DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENA 319
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
+++ + ++N+LI L + S ++L+ M G P+ T+ +I
Sbjct: 320 VVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRY 379
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
+ + VE A+ ++EKM PNL YN +I+G+
Sbjct: 380 YSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 165/377 (43%), Gaps = 43/377 (11%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
+ +F++ ID+A ++ ++ +M + I P T+ + + GK A
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLR---IGPSPKTFAIVAERYASAGKPDKAV 146
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH-W 149
KL M E ++ ++ T++D +++ +E+A+ L ++ +++V YN +++ W
Sbjct: 147 KLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGW 205
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
++ + + +L MV+ I P+ TY+ + KG R G + A+
Sbjct: 206 CLIKRTPKALEVL-KEMVERGINPNLTTYNTMLKGFFRAGQIRHAW-------------- 250
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
+ M R D+VT+ +++ G G ++ A V++
Sbjct: 251 ---------------------EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFD 289
Query: 270 KMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSG 328
+M++ G P++ YN++I LCK++ +V TYN LI G ++G
Sbjct: 290 EMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Query: 329 KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYT 388
+ M+N G N TYN +I + + +++A L + M +P+ TY
Sbjct: 350 EFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYN 409
Query: 389 ILITS-FSKKCSPEEVI 404
ILI+ F +K S + V+
Sbjct: 410 ILISGMFVRKRSEDMVV 426
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 35/272 (12%)
Query: 162 LISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLC 221
LI M RI P T++I+ + G ++A K + E+ +D S N +++ LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 222 RSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLV 281
+S + A +L ++ R V D VT+ +++G C A++V ++M++ G PNL
Sbjct: 173 KSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 282 LYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMK 341
TYNT++ G+ +G+I A+ F MK
Sbjct: 232 ----------------------------------TYNTMLKGFFRAGQIRHAWEFFLEMK 257
Query: 342 NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
+ TY T+++ G I++A+ + MI +G +P TY +I KK + E
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVE 317
Query: 402 EVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ + + MV +G P+ TY ++ L G
Sbjct: 318 NAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 115/250 (46%), Gaps = 19/250 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV++ C + +A+ V ++ GI PN+ T+N ++ + G + A + +M+
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
D +TY ++ GF G++ A + +EM+ + ++P+V TY +I + +
Sbjct: 259 RDC---EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDN 315
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+E A + +EM+++G N YN +I L+ G+ L+ M + P+ TY++
Sbjct: 316 VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNM 375
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ + V +A K+ + + + ++NILI + M+VR
Sbjct: 376 MIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI----------------SGMFVRK 419
Query: 241 LVPDIVTFGS 250
D+V G+
Sbjct: 420 RSEDMVVAGN 429
>AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G55840.1); Has
18933 Blast hits to 5737 proteins in 174 species: Archae
- 4; Bacteria - 8; Metazoa - 352; Fungi - 335; Plants -
17540; Viruses - 0; Other Eukaryotes - 694 (source: NCBI
BLink). | chr5:16166444-16168276 FORWARD
Length = 610
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 155/328 (47%), Gaps = 2/328 (0%)
Query: 108 YATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMV 167
+ L+ GY + +EE FR+ E++ G ++ V N +++ L ME + S M
Sbjct: 169 FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMC 228
Query: 168 DNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLS 227
I P+ +T++ILT C + N E F K+ E D ++N L++ CR L
Sbjct: 229 RVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLK 288
Query: 228 GAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI 287
A L MY R +VPD+VT+ SLI G CK+G V A Q + +M+ G KP+ + YN++I
Sbjct: 289 EAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLI 348
Query: 288 NGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIA 346
CKE ++ D T ++ G+ G++ A F ++ +
Sbjct: 349 YAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVD 408
Query: 347 ANHATYNTLINFLCKLGHIQQAKELM-KVMILQGFVPDYITYTILITSFSKKCSPEEVIK 405
+ LI LC+ G AK L+ +++ +G TY LI S S+ + EE +
Sbjct: 409 IPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALV 468
Query: 406 LHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
L + + + +TY+A++ L + G
Sbjct: 469 LKGKLKNQNQVLDAKTYRALIGCLCRIG 496
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 158/371 (42%), Gaps = 41/371 (11%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
GI PN TFN++ +V C +V +E M PD +TYN L+ +C+ G+L
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFR---EVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
A L M + +VP++ TY +LI G + + EA + M+ +G+ + + YNT+
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV--------------- 191
I+ EG M+ L+ M+ N + PD+FT ++ +G R G +
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKV 407
Query: 192 ---------------NEAFKFHSKILENNLIED------AFSHNILINYLCRSNNLSGAK 230
E F +K L + +IE+ ++N LI L R + + A
Sbjct: 408 DIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEAL 467
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
L + + V D T+ +LI C+ G A + +M S KP+ + +++ G
Sbjct: 468 VLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGY 527
Query: 291 CKE-EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG-KIDEAFAFSFAMKNAGIAAN 348
CKE + +FD +YN+L+ C +G +A M+ G N
Sbjct: 528 CKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPN 587
Query: 349 HATYNTLINFL 359
T LI L
Sbjct: 588 RLTCKYLIQVL 598
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 185/416 (44%), Gaps = 24/416 (5%)
Query: 29 WPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
W VV F+M++ K+G ++ +V ++ + S +S+ +T N L+ G K+ +
Sbjct: 164 WDPVV-FDMLVKGYLKLGLVEEGFRVFREV-LDSGFSV--SVVTCNHLLNGLLKLDLMED 219
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
++ + M I PN T+ L + + + E ++M ++G + V YNT++
Sbjct: 220 CWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVS 279
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
G ++ L M R+ PD TY+ L KGLC++G V EA + ++++ +
Sbjct: 280 SYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKP 339
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D S+N LI C+ + +K+LL M +VPD T +++G +EG + +AV
Sbjct: 340 DCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVI-----------TY 317
++ + + + +I LC+E +L D I TY
Sbjct: 400 VELRRLKVDIPFEVCDFLIVSLCQE---------GKPFAAKHLLDRIIEEEGHEAKPETY 450
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
N LI I+EA +KN + TY LI LC++G ++A+ LM M
Sbjct: 451 NNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFD 510
Query: 378 QGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
PD L+ + K+ ++ +L ++ I ++Y ++V + + G
Sbjct: 511 SEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETG 566
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 40/287 (13%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I LCK+ ++ EA F+R + GI P+ +++N +I CK G M + K++ +M S
Sbjct: 312 LIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNS 371
Query: 63 VYSIRPDSITYNCLIGGF-----------------------------------CKMGKLT 87
V PD T ++ GF C+ GK
Sbjct: 372 VV---PDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPF 428
Query: 88 MAEKLKNEMMEKD-IVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
A+ L + ++E++ TY LI+ SR ++EEA L ++ + V+++ Y +
Sbjct: 429 AAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRAL 488
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
I L G L++ M D+ + PD F L G C+ + ++A + S
Sbjct: 489 IGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFR 548
Query: 207 IEDAFSHNILINYLCRSN-NLSGAKQLLASMYVRGLVPDIVTFGSLI 252
I D S+N L+ +C + A +L M G VP+ +T LI
Sbjct: 549 IFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLI 595
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
D V F L+ G+ K G VE +V+ +++ SG ++V N ++NGL K +
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 304 XXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKL 362
+ + + T+N L N +CN E F M+ G + TYNTL++ C+
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 363 GHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
G +++A L K+M + VPD +TYT LI K E + MV +G+ P +Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 423 KAVVSPLLQEGV 434
++ +EG+
Sbjct: 345 NTLIYAYCKEGM 356
>AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G09900.1); Has 18740 Blast hits to 5421
proteins in 159 species: Archae - 3; Bacteria - 12;
Metazoa - 272; Fungi - 258; Plants - 17650; Viruses - 2;
Other Eukaryotes - 543 (source: NCBI BLink). |
chr2:15195663-15197156 FORWARD
Length = 497
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 152/361 (42%), Gaps = 36/361 (9%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
F ID C+ MD AL M+ + +P+ YN ++ G+ K G + A +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMK--RLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG 154
M ++ P+V T+ LI+GY R+ + A L EM +KG N V +NT+I G
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 155 DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHN 214
+E + M++ + T IL GLCR G V++A +L ++ F +
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
L+ LC N A +++ ++ +G P + +L++G K G E A EKMM +
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 275 GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAF 334
G P D +T+N L+ C+S +A
Sbjct: 398 GILP----------------------------------DSVTFNLLLRDLCSSDHSTDAN 423
Query: 335 AFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
+ G + TY+ L++ K G ++ + L+ M+ + +PD TY L+
Sbjct: 424 RLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Query: 395 S 395
S
Sbjct: 484 S 484
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 141/326 (43%), Gaps = 6/326 (1%)
Query: 108 YATLIDGYSRARSLEEAFRLCDEMMKKGLV---MNSVIYNTVIHWLYVEGDMEGVSLLIS 164
+ + ID Y RAR ++ A D M K L+ N +YNTV++ GDM+
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTM--KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 165 SMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSN 224
M R PD T++IL G CR+ + A ++ E + S N LI S
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 225 NLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYN 284
+ ++ M G T L+DG C+EG V++A + ++ P+ Y
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 285 SVINGLCKEEXXXXXXXXXXXXXXMNLFD-VITYNTLINGYCNSGKIDEAFAFSFAMKNA 343
S++ LC E I TL+ G SG+ ++A F M NA
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 344 GIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEV 403
GI + T+N L+ LC H A L + +G+ PD TY +L++ F+K+ +E
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 404 IKLHDYMVLKGVIPHKQTYKAVVSPL 429
L + M+ K ++P TY ++ L
Sbjct: 458 EVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 138/290 (47%), Gaps = 3/290 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N V+ K + +A+ + R K P+V TFN++I+ C+ DLAL + +M+
Sbjct: 197 NTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKE 256
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
P+ +++N LI GF GK+ K+ EM+E + T L+DG R
Sbjct: 257 KGC---EPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR 313
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+++A L +++ K ++ + Y +++ L E ++ + P +
Sbjct: 314 VDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT 373
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L +GL ++G +A F K++ ++ D+ + N+L+ LC S++ + A +L +G
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
PD T+ L+ G KEG + + +M+ P++ YN +++GL
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGE-KPNLVLYNSVINGLCKE-EXXXXXXXXXXX 305
F S ID +C+ ++ A+ ++ M + + KPN+ +YN+V+NG K +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 306 XXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
DV T+N LINGYC S K D A MK G N ++NTLI G I
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
++ ++ MI G T IL+ ++ ++ L ++ K V+P + Y ++
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 426 VSPLLQE 432
V L E
Sbjct: 340 VEKLCGE 346
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%)
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
+V YNT++NGY SG +D+A F M + T+N LIN C+ A +L
Sbjct: 192 NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLF 251
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
+ M +G P+ +++ LI F EE +K+ M+ G + T + +V L +E
Sbjct: 252 REMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCRE 311
Query: 433 G 433
G
Sbjct: 312 G 312
>AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6129255-6130775 REVERSE
Length = 506
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 143/302 (47%), Gaps = 34/302 (11%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKM---------------------------- 58
G+ PN FN+++ CK G ++ A VV +M
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 59 ------EVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLI 112
+++S I PD +T+N +I GFC+ G++ A+K+ + M + PNV Y+ L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 113 DGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIP 172
+G+ + ++EA + DE+ K GL +++V Y T+++ G+ + L+ M +R
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 173 PDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQL 232
D TY+++ +GL G EA + + + + S+ I++N LC + L A +
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 233 LASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
L+ M RG+ P T+ L+ C+ G E V+V ++ G P + +V+ +CK
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Query: 293 EE 294
E
Sbjct: 491 ER 492
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 146/301 (48%), Gaps = 3/301 (0%)
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIP-PDKFTYSILTKGLCRNGNVNE 193
GL N+ I+N ++ GD+ L++ M + I P+ TYS L L + E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 194 AFK-FHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
A + F I + + D + N++IN CR+ + AK++L M G P++ + +L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE-EXXXXXXXXXXXXXXMNL 311
+G CK G ++ A Q ++++ K+G K + V Y +++N C+ E
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 312 FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
D +TYN ++ G + G+ +EA + G+ N +Y ++N LC G +++A +
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 372 MKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
+ VM +G P + T+ L+ + E +++ + G+IP +++ AVV + +
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Query: 432 E 432
E
Sbjct: 491 E 491
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 169/381 (44%), Gaps = 46/381 (12%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
N++ID G ++L+ K++ + ++P++ +N L+ CK G + A +
Sbjct: 167 LNLLIDS----GEVNLSRKLL--LYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVE 220
Query: 95 EMMEKDI-VPNVRTYATLID---GYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
EM I PN TY+TL+D +SR++ E F D + K+G+ + V +N +I+
Sbjct: 221 EMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFE--DMISKEGISPDPVTFNVMINGF 278
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
G++E ++ M N P+ + YS L G C+ G + EA + ++ + L D
Sbjct: 279 CRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDT 338
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
+ L+N CR+ A +LL M D +T+ ++ G EG E A+Q+ ++
Sbjct: 339 VGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQ 398
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKI 330
G N Y ++N LC CN G++
Sbjct: 399 WGSEGVHLNKGSYRIILNALC---------------------------------CN-GEL 424
Query: 331 DEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
++A F M GI +HAT+N L+ LC+ G+ + ++ + G +P ++ +
Sbjct: 425 EKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAV 484
Query: 391 ITSFSKKCSPEEVIKLHDYMV 411
+ S K+ V +L D +V
Sbjct: 485 VESICKERKLVHVFELLDSLV 505
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 177/372 (47%), Gaps = 9/372 (2%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR---SLEEAF 125
++ TY+ L+ + K + + ++M + + L+ +SR+ + E F
Sbjct: 88 NNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMF 147
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME-GVSLLISSMVDNRIPPDKFTYSILTKG 184
L + + +N++ +T ++ L G++ LL+ + + + P+ ++IL K
Sbjct: 148 NLIQVIARVKPSLNAI--STCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKH 205
Query: 185 LCRNGNVNEAFKFHSKILENNL-IEDAFSHNILINYLCRSNNLSGAKQLLASMYVR-GLV 242
C+NG++N AF ++ + + ++ +++ L++ L + A +L M + G+
Sbjct: 206 HCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGIS 265
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
PD VTF +I+G C+ G VE A ++ + M K+G PN+ Y++++NG CK
Sbjct: 266 PDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQT 325
Query: 303 XXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
L D + Y TL+N +C +G+ DEA MK + A+ TYN ++ L
Sbjct: 326 FDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSS 385
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQT 421
G ++A +++ +G + +Y I++ + E+ +K M +G+ PH T
Sbjct: 386 EGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHAT 445
Query: 422 YKAVVSPLLQEG 433
+ +V L + G
Sbjct: 446 WNELVVRLCESG 457
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 136/275 (49%), Gaps = 12/275 (4%)
Query: 1 NVVIYALCKEC-----KLLEAMSVFYRSL-KHGIWPNVVTFNMIIDVACKMGAMDLALKV 54
N + Y+ +C + EA+ +F + K GI P+ VTFN++I+ C+ G ++ A K+
Sbjct: 231 NSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKI 290
Query: 55 VSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDG 114
++ M P+ Y+ L+ GFCK+GK+ A++ +E+ + + + Y TL++
Sbjct: 291 ---LDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 115 YSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPD 174
+ R +EA +L EM +++ YN ++ L EG E ++ + +
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLN 407
Query: 175 KFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLA 234
K +Y I+ LC NG + +A KF S + E + + N L+ LC S ++L
Sbjct: 408 KGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLI 467
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
GL+P ++G++++ CKE + V V+E
Sbjct: 468 GFLRIGLIPGPKSWGAVVESICKERKL---VHVFE 499
>AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18941118-18942524 FORWARD
Length = 468
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 191/416 (45%), Gaps = 25/416 (6%)
Query: 29 WPNVVT--FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIR----PDSITYNCLIGGFCK 82
+P + T N+ ++ CK + + + E + + IR PD ITYN LI G+ +
Sbjct: 8 FPGISTKLLNISVNSLCK-------FRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTR 60
Query: 83 MGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVI 142
+ A + M E I P+V TY +LI G ++ L +L DEM+ GL +
Sbjct: 61 FIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWS 120
Query: 143 YNTVIHWLYVEGDM-EGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
YNT++ + G E +L + + P TY+IL LC++G+ + A + K
Sbjct: 121 YNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELF-KH 179
Query: 202 LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNV 261
L++ + + ++NILIN LC+S + ++ + G P+ VT+ +++ + K +
Sbjct: 180 LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRI 239
Query: 262 ENAVQVYEKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVITY 317
E +Q++ KM K G + +V++ L K EE D+++Y
Sbjct: 240 EKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQ--DIVSY 297
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
NTL+N Y G +D ++ G+ + T+ ++N L +G+ A++ + +
Sbjct: 298 NTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGE 357
Query: 378 QGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
G P +T LI K + ++L M ++ + TY +VV L ++G
Sbjct: 358 MGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDG 409
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 140/281 (49%), Gaps = 10/281 (3%)
Query: 15 EAMSVFYRSLK-HGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITY 73
EA + + + G+ P + T+N+++D CK G D A+++ ++ ++P+ +TY
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS----RVKPELMTY 191
Query: 74 NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK 133
N LI G CK ++ + + E+ + PN TY T++ Y + + +E+ +L +M K
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 134 KGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRI-PPDKFTYSILTKGLCRNGNVN 192
+G + V+ L G E + +V + D +Y+ L ++GN++
Sbjct: 252 EGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLD 311
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
+I L D ++H I++N L N GA++ LA + G+ P +VT LI
Sbjct: 312 AVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLI 371
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
DG CK G+V+ A++++ M E + Y SV++ LCK+
Sbjct: 372 DGLCKAGHVDRAMRLFASM----EVRDEFTYTSVVHNLCKD 408
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 149/346 (43%), Gaps = 7/346 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I K L + +F L G+ P++ ++N ++ K+G A K++ E
Sbjct: 87 NSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILH--ED 144
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ + + P TYN L+ CK G A +L + + + P + TY LI+G ++R
Sbjct: 145 IHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRR 203
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ + E+ K G N+V Y T++ + +E L M D F
Sbjct: 204 VGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCA 263
Query: 181 LTKGLCRNGNVNEAFK-FHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ L + G EA++ H + +D S+N L+N + NL LL + ++
Sbjct: 264 VVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMK 323
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
GL PD T +++G GN A + + + G +P++V N +I+GLCK
Sbjct: 324 GLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCK---AGHV 380
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGI 345
M + D TY ++++ C G++ A + N G+
Sbjct: 381 DRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426
>AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25041901-25044849 REVERSE
Length = 982
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 195/435 (44%), Gaps = 13/435 (2%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+ Y CK EA ++F G + + V + ++ CK M +A+++ +M
Sbjct: 243 LFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRM---V 299
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
S D +N LI GF K+G L + ++M++K + NV TY +I Y + +++
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 123 EAFRL-CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
A RL + + + N Y +I Y +G M+ L+ M+DN I PD TY +L
Sbjct: 360 YALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVL 419
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGA-KQLLASMYVRG 240
K L + + A IL+N + + L N + +L G + A++ G
Sbjct: 420 LKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVG 479
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
L +VT C + N A+ EKM+ G P YNSVI L +E
Sbjct: 480 LA--VVT-----TALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLA 532
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
++ DV TY ++N C D AFA AM+ G+ A Y+++I L
Sbjct: 533 SLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSL 592
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
K G + +A+E M+ G PD I Y I+I ++++ +E +L + +V + P
Sbjct: 593 GKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSS 652
Query: 420 QTYKAVVSPLLQEGV 434
TY ++S ++ G+
Sbjct: 653 FTYTVLISGFVKMGM 667
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 179/403 (44%), Gaps = 44/403 (10%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
P+V T+ ++++ CK D A ++ ME + +RP Y+ +IG K G++ A
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELG---LRPTVAIYSSIIGSLGKQGRVVEA 601
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
E+ +M+E I P+ Y +I+ Y+R ++EA L +E++K L +S Y +I
Sbjct: 602 EETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISG 661
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
G ME + M+++ + P+ Y+ L + G+ +F + EN++ D
Sbjct: 662 FVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHD 721
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVEN---AVQ 266
++ L++ L R+ +Q++ L+ ++ L+ GN + A++
Sbjct: 722 HIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAME 781
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCN 326
V K+ KS PNL L+N T+I GYC
Sbjct: 782 VIGKVKKS-IIPNLYLHN----------------------------------TIITGYCA 806
Query: 327 SGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYIT 386
+G++DEA+ +M+ GI N TY L+ + G I+ A +L + + PD +
Sbjct: 807 AGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCE---PDQVM 863
Query: 387 YTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
Y+ L+ P + + L M G+ P+K +Y+ ++ L
Sbjct: 864 YSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCL 906
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 167/363 (46%), Gaps = 9/363 (2%)
Query: 52 LKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATL 111
+ +S++E M P +YN +I + + L N + E D VP+V TY +
Sbjct: 494 IAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIV 553
Query: 112 IDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRI 171
++ + + AF + D M + GL IY+++I L +G + + M+++ I
Sbjct: 554 VNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGI 613
Query: 172 PPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQ 231
PD+ Y I+ RNG ++EA + +++++ L +F++ +LI+ + + Q
Sbjct: 614 QPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQ 673
Query: 232 LLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC 291
L M GL P++V + +LI K+G+ + + ++ M ++ K + + Y ++++GL
Sbjct: 674 YLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLW 733
Query: 292 KEEXXXXXXXXXXXXXXMNLFD-VITYNTLINGYCNSGKIDEAFAFSFAMKNAG-----I 345
+ L +I L++ + G SFAM+ G I
Sbjct: 734 RAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSK---SFAMEVIGKVKKSI 790
Query: 346 AANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIK 405
N +NT+I C G + +A ++ M +G VP+ +TYTIL+ S + E I
Sbjct: 791 IPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAID 850
Query: 406 LHD 408
L +
Sbjct: 851 LFE 853
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 141/375 (37%), Gaps = 84/375 (22%)
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNE-MMEKDIVPNVRTYATLIDGYSRARSLEEA 124
I DS Y LI +MG+ +AE N+ ++ IVP+ +++ + R +EA
Sbjct: 91 IELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEA 150
Query: 125 FRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKG 184
D ++ G P + + S++
Sbjct: 151 RAHLDRIIASGYA-----------------------------------PSRNSSSLVVDE 175
Query: 185 LCRNGNVNEAFKFHSKILEN----------NLIEDAFSHNIL------------------ 216
LC EAF ++ E L + H L
Sbjct: 176 LCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPL 235
Query: 217 -INY-------LCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
+N C+ + A+ L M V G D V + L+ +CK+ N+ A+++Y
Sbjct: 236 PVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLY 295
Query: 269 EKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVITYNTLINGY 324
+M++ + + ++N++I+G K ++ N+F TY+ +I Y
Sbjct: 296 LRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVF---TYHIMIGSY 352
Query: 325 CNSGKIDEAFAFSFAMKNAG---IAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFV 381
C G +D +A + N G I+ N Y LI K G + +A +L+ M+ G V
Sbjct: 353 CKEGNVD--YALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIV 410
Query: 382 PDYITYTILITSFSK 396
PD+ITY +L+ K
Sbjct: 411 PDHITYFVLLKMLPK 425
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 5/279 (1%)
Query: 159 VSLLISSMVDNRIPPDKFTYSILTKGLCRNGN--VNEAFKFHSKILENNLIEDAFSHNIL 216
+L+ VDN I D Y L + L G V E F ++ +++ N ++ D+ + +
Sbjct: 79 AALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETF-YNQRVIGNGIVPDSSVLDSM 137
Query: 217 INYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE 276
+ L + A+ L + G P + ++D C + A +E++ + G
Sbjct: 138 VFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGS 197
Query: 277 KPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL--FDVITYNTLINGYCNSGKIDEAF 334
L + GLC M V Y +L +C G EA
Sbjct: 198 GLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAE 257
Query: 335 AFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
A M+ G + Y L+ CK ++ A L M+ + F D + LI F
Sbjct: 258 ALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGF 317
Query: 395 SKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
K ++ + M+ KGV + TY ++ +EG
Sbjct: 318 MKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEG 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I C +L EA + K GI PN+VT+ +++ + G ++ S +++
Sbjct: 798 NTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIE------SAIDL 851
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ PD + Y+ L+ G C + A L EM + I PN +Y L+ +R
Sbjct: 852 FEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRL 911
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDN 169
EA ++ +M + S+ + +I+ L E + L + MV +
Sbjct: 912 TMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQS 960
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46100.1). | chr4:575843-577243 REVERSE
Length = 466
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 140/295 (47%), Gaps = 8/295 (2%)
Query: 2 VVIYALCKECKLLE-AMSVFYRSLKHGIWPNVVTFNMIIDV-ACKMGAMDLALKVVSKME 59
+ +YA E KL E +S FY+ L+ P N I+DV G + A ++ +
Sbjct: 126 IKVYA---EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL---FK 179
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
++ + P++ +YN L+ FC L++A +L +M+E+D+VP+V +Y LI G+ R
Sbjct: 180 SSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+ A L D+M+ KG V + + Y T+++ L + + L+ M PD Y+
Sbjct: 240 QVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYN 299
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ G CR +A K +L N ++ S+ LI LC K+ L M +
Sbjct: 300 TMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISK 359
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
G P L+ G C G VE A V E +MK+GE + + VI +C E+
Sbjct: 360 GFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNED 414
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 4/269 (1%)
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARS-LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
+M+E + P + ++D R L++AF L G++ N+ YN ++ +
Sbjct: 144 KMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLN 203
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
D+ L M++ + PD +Y IL +G CR G VN A + +L + D S+
Sbjct: 204 DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSY 263
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
L+N LCR L A +LL M ++G PD+V + ++I G C+E +A +V + M+
Sbjct: 264 TTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLS 323
Query: 274 SGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITY-NTLINGYCNSGKIDE 332
+G PN V Y ++I GLC + + N L+ G+C+ GK++E
Sbjct: 324 NGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
Query: 333 AF-AFSFAMKNAGIAANHATYNTLINFLC 360
A MKN G + T+ +I +C
Sbjct: 384 ACDVVEVVMKN-GETLHSDTWEMVIPLIC 411
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 171/371 (46%), Gaps = 25/371 (6%)
Query: 77 IGGFCKMGKLTMAEKLKNEMMEKDIV------PNVR----TYATLIDGYSRARSLEEAFR 126
IG ++ KL ++ + ++ K+I PN R ++ LI R R F
Sbjct: 48 IGSPTRVQKLIASQS--DPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGR----YFN 101
Query: 127 LCDEMMKK----GLVMNSVIYNTVIHWLYVEGDM-EGVSLLISSMVD-NRIPPDKFTYSI 180
L D+++ K G + I+ +I +Y E + E V M++ N P K I
Sbjct: 102 LIDDVLAKHRSSGYPLTGEIFTYLIK-VYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRI 160
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + G + +AF+ + ++ + S+N+L+ C +++LS A QL M R
Sbjct: 161 LDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERD 220
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+VPD+ ++ LI G C++G V A+++ + M+ G P+ + Y +++N LC++
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAY 280
Query: 301 XXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
D++ YNT+I G+C + +A M + G + N +Y TLI L
Sbjct: 281 KLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL 340
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
C G + K+ ++ MI +GF P + L+ F EE + + ++ G H
Sbjct: 341 CDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHS 400
Query: 420 QTYKAVVSPLL 430
T++ V+ PL+
Sbjct: 401 DTWEMVI-PLI 410
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 3/233 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ A C L A +F + L+ + P+V ++ ++I C+ G ++ A++++ M
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
PD ++Y L+ C+ +L A KL M K P++ Y T+I G+ R
Sbjct: 254 KGFV---PDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDR 310
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+A ++ D+M+ G NSV Y T+I L +G + + M+ P +
Sbjct: 311 AMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 370
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
L KG C G V EA +++N + + ++I +C + K L
Sbjct: 371 LVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFL 423
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 35/236 (14%)
Query: 200 KILENNLIEDAFSHNILINYLCRSNN-LSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
K+LE N N +++ L L A +L S + G++P+ ++ L+ C
Sbjct: 144 KMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLN 203
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYN 318
++ A Q++ KM++ P DV +Y
Sbjct: 204 DDLSIAYQLFGKMLERDVVP----------------------------------DVDSYK 229
Query: 319 TLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
LI G+C G+++ A M N G + +Y TL+N LC+ +++A +L+ M L+
Sbjct: 230 ILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLK 289
Query: 379 GFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
G PD + Y +I F ++ + K+ D M+ G P+ +Y+ ++ L +G+
Sbjct: 290 GCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGM 345
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
++ +LC++ +L EA + R G P++V +N +I C+ D A+ ++ M
Sbjct: 265 TLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRE---DRAMDARKVLDDM 321
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
P+S++Y LIGG C G +K EM+ K P+ L+ G+ +
Sbjct: 322 LSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKV 381
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPD 174
EEA + + +MK G ++S + VI + E + E + L + V I D
Sbjct: 382 EEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 434
>AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675811 FORWARD
Length = 463
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 140/283 (49%), Gaps = 2/283 (0%)
Query: 153 EGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFS 212
+ + V +++ MV+N + PD+ T I + LC G V+EA ++ E + D ++
Sbjct: 137 DSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYT 196
Query: 213 HNILINYLCRSNNLSGAKQLLASMYVR-GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
+N L+ +LC+ +L + + M + PD+V+F LID C N+ A+ + K+
Sbjct: 197 YNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKL 256
Query: 272 MKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKI 330
+G KP+ LYN+++ G C + D ITYNTLI G +G++
Sbjct: 257 GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRV 316
Query: 331 DEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
+EA + M +AG + ATY +L+N +C+ G A L++ M +G P+ TY L
Sbjct: 317 EEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL 376
Query: 391 ITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ K ++ ++L++ M GV Y +V L++ G
Sbjct: 377 LHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSG 419
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 148/318 (46%), Gaps = 4/318 (1%)
Query: 98 EKDIVPNVRTYATLIDGYSRA--RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGD 155
+ + P T+ L+ RA S+ R+ + M+ GL + V + + L G
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 156 MEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN-NLIEDAFSHN 214
++ L+ + + PPD +TY+ L K LC+ +++ ++F ++ ++ ++ D S
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
ILI+ +C S NL A L++ + G PD + +++ G C AV VY+KM +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 275 GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEA 333
G +P+ + YN++I GL K D TY +L+NG C G+ A
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGA 354
Query: 334 FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
+ M+ G A N TYNTL++ LCK + + EL ++M G + Y L+ S
Sbjct: 355 LSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRS 414
Query: 394 FSKKCSPEEVIKLHDYMV 411
K E ++ DY V
Sbjct: 415 LVKSGKVAEAYEVFDYAV 432
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 173/370 (46%), Gaps = 43/370 (11%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSK-MEVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
P TF +++ AC+ A D ++ V + + +M + PD +T + + C+ G++
Sbjct: 120 PGRSTFLILLSHACR--APDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM-----MKKGLVMNSVIY 143
A+ L E+ EK P+ TY L+ + + L + DEM +K LV +++
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 144 NTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILE 203
+ V + ++ L+S + + PD F Y+ + KG C +EA + K+ E
Sbjct: 238 DNVCN----SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 204 NNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVEN 263
+ D ++N LI L ++ + A+ L +M G PD T+ SL++G C++G
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLG 353
Query: 264 AVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVIT------- 316
A+ + E+M G PN YN++++GLCK M L++++
Sbjct: 354 ALSLLEEMEARGCAPNDCTYNTLLHGLCKAR---------LMDKGMELYEMMKSSGVKLE 404
Query: 317 ---YNTLINGYCNSGKIDEAF-AFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
Y TL+ SGK+ EA+ F +A+ + + ++ + Y+TL L +++AKE
Sbjct: 405 SNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSL-SDASAYSTLET---TLKWLKKAKE-- 458
Query: 373 KVMILQGFVP 382
QG VP
Sbjct: 459 -----QGLVP 463
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 191/452 (42%), Gaps = 56/452 (12%)
Query: 34 TFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLK 93
T ++ V C G + AL V + E++S + D L+ FCK G++ A +L
Sbjct: 216 TLTPVLQVYCNTGKSERALSVFN--EILSRGWL--DEHISTILVVSFCKWGQVDKAFELI 271
Query: 94 NEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
+ E+DI N +TY LI G+ + +++AF+L ++M + G+ + +Y+ +I L
Sbjct: 272 EMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKH 331
Query: 154 GDMEGVSLLISSMVDNRIPPDK---------------------------------FTYSI 180
D+E L + + IPPD+ Y
Sbjct: 332 KDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKS 391
Query: 181 LTKGLCRNGNVNEAFKFHSKILEN------------------NLIEDAFSHNILINYLCR 222
L +G RN V+EA+ F ++ N ++ D+ S +I+IN L +
Sbjct: 392 LFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVK 451
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVL 282
+N + A LL + GL+P + + ++I+G CKEG E ++++ +M +G +P+
Sbjct: 452 ANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFT 511
Query: 283 YNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNT-LINGYCNSGKIDEAFAFSFAMK 341
N + L + I + T L+ C +G+ +A + +
Sbjct: 512 LNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVA 571
Query: 342 NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
G + I+ L K + + EL + + G PD I Y +LI + K C
Sbjct: 572 GEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTM 631
Query: 402 EVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
E L + MV KG+ P TY +++ +EG
Sbjct: 632 EADILFNEMVSKGLKPTVATYNSMIDGWCKEG 663
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 132/530 (24%), Positives = 205/530 (38%), Gaps = 103/530 (19%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+V+I ALCK C+ +EA +F + G+ P V T+N +ID CK G +D L + +M
Sbjct: 618 HVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM-- 675
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRA-- 118
PD ITY LI G C G+ + A NEM KD PN T+ LI G +
Sbjct: 676 -YEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGW 734
Query: 119 --------RSLEE-------------------------AFRLCDEMMKKGLVMNSVIYNT 145
R +EE F + EM+ KG SV N
Sbjct: 735 SGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNY 794
Query: 146 VIHWLYVEGDME---------------GVSLLISSMVDNRIP----------------PD 174
++ + V D++ G + +I ++R P PD
Sbjct: 795 MLA-VNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPD 853
Query: 175 KFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLA 234
TY L K R N H ++++ L D F N LI+ + + A++L
Sbjct: 854 HMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFD 913
Query: 235 SMYVRGLVP---------------------------DIVTFGSLIDGHCKEGNVENAVQV 267
M + LV D+VT+ S+IDG+ K G A+++
Sbjct: 914 EMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEI 973
Query: 268 YEKMMKSG-EKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYC 325
+++MM+ G K N V SVI ++L VI +LI+ Y
Sbjct: 974 FDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYA 1033
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHA-TYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
G I +A++ + A + A +N +I L G I+++ +L M PD
Sbjct: 1034 KCGSIGDAWSVFY---RASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDE 1090
Query: 385 ITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
IT+ L+ + S +E + G P + Y +V L + G+
Sbjct: 1091 ITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGL 1140
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 193/452 (42%), Gaps = 26/452 (5%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
V+I+ KE ++ +A +F + + G+ ++ ++++I CK +++AL + +++
Sbjct: 288 VLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRS 347
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLT-MAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
I PD L+ F + +L+ + E + ++ +K ++ Y +L +G+ R
Sbjct: 348 G---IPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVM---LLYKSLFEGFIRNDL 401
Query: 121 LEEAFRLCDEMM------------------KKGLVMNSVIYNTVIHWLYVEGDMEGVSLL 162
+ EA+ +M K ++ +S + VI+ L ++ L
Sbjct: 402 VHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTL 461
Query: 163 ISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR 222
+ +V N + P Y+ + +G+C+ G E+ K ++ + + F+ N + L
Sbjct: 462 LHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAE 521
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVL 282
+ GA LL M G P I L+ C+ G +A + + + G ++V
Sbjct: 522 RCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVA 581
Query: 283 YNSVINGLCKEEXXXXXXXXXXXX-XXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMK 341
+ I+GL K E + DVI Y+ LI C + + EA M
Sbjct: 582 STAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMV 641
Query: 342 NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
+ G+ ATYN++I+ CK G I + + M PD ITYT LI P
Sbjct: 642 SKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPS 701
Query: 402 EVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
E I + M K P++ T+ A++ L + G
Sbjct: 702 EAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 130/293 (44%), Gaps = 5/293 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++VI L K K+ A+++ + +++G+ P + +N II+ CK G + +LK++ +M+
Sbjct: 443 SIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKD 502
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
V P T NC+ G + A L +M P ++ L+
Sbjct: 503 AGV---EPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGR 559
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYV-EGDMEGVSLLISSMVDNRIPPDKFTYS 179
+A + D++ +G + + V I L EG G+ L + N PD Y
Sbjct: 560 AVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELF-RDICANGHCPDVIAYH 618
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+L K LC+ EA ++++ L ++N +I+ C+ + + MY
Sbjct: 619 VLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYED 678
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
PD++T+ SLI G C G A+ + +M PN + + ++I GLCK
Sbjct: 679 EKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 141/367 (38%), Gaps = 56/367 (15%)
Query: 121 LEEAFRLCDEMMKKGL-VMNSVIYNTVIHWLYVE--GDMEGVSLLISSMVDNRIPPDKFT 177
++EA + D + + GL V N+ YN ++ + +E V + M D DKFT
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFT 216
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
+ + + C G A ++IL +++ S IL+ C+ + A +L+ +
Sbjct: 217 LTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLE 275
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK----- 292
R + + T+ LI G KE ++ A Q++EKM + G ++ LY+ +I GLCK
Sbjct: 276 ERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLE 335
Query: 293 -----------------------------EEXXXXXXXXXXXXXXMNLFDVITYNTLING 323
EE ++ Y +L G
Sbjct: 336 MALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEG 395
Query: 324 YCNSGKIDEAFAFSFAM------------------KNAGIAANHATYNTLINFLCKLGHI 365
+ + + EA++F + N I + + + +IN L K +
Sbjct: 396 FIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKV 455
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
A L+ ++ G +P + Y +I K+ EE +KL M GV P + T +
Sbjct: 456 DMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCI 515
Query: 426 VSPLLQE 432
L +
Sbjct: 516 YGCLAER 522
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 116/243 (47%), Gaps = 7/243 (2%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
+VVT++ +ID K G + AL++ +M M + S + + +T +I +G L +
Sbjct: 950 DVVTWSSMIDGYVKRGEYNKALEIFDQM--MRMGSSKANEVTMVSVICACAHLGALNRGK 1007
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
+ +++ + V +LID Y++ S+ +A+ + K +++++N +I L
Sbjct: 1008 TVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE--TDALMWNAIIGGL 1065
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
G + L M +++I PD+ T+ L G V EA+ F + E+ +
Sbjct: 1066 ASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKS 1125
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
+ +++ L R+ + A ++ M ++ P G+L++G GN+E A V +K
Sbjct: 1126 EHYACMVDVLSRAGLVKDAHDFISEMPIK---PTGSMLGALLNGCINHGNLELAETVGKK 1182
Query: 271 MMK 273
+++
Sbjct: 1183 LIE 1185
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 7/298 (2%)
Query: 104 NVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLI 163
N + T+++G+ R F + ++G + YN + L + L+
Sbjct: 72 NTKVVETVLNGFKRWGLAYLFFNWASK--QEGYRNDMYAYNAMASILSRARQNASLKALV 129
Query: 164 SSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL-IEDAFSHNILINYLCR 222
++++R + + L G V+EA ++ E L + +A+++N L+ + +
Sbjct: 130 VDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISK 189
Query: 223 SNNLSG--AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNL 280
SN+ S + L M G D T ++ +C G E A+ V+ +++ G
Sbjct: 190 SNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEH 249
Query: 281 VLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFA 339
+ V++ CK ++ + TY LI+G+ +ID+AF
Sbjct: 250 ISTILVVS-FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEK 308
Query: 340 MKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK 397
M+ G+ A+ A Y+ LI LCK ++ A L + G PD L+ SFS++
Sbjct: 309 MRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEE 366
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 137/322 (42%), Gaps = 16/322 (4%)
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M + + PD +TY L+ ++ + L +++ + ++ TLI Y R
Sbjct: 845 MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRD 904
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
A +L DEM K L V +N+++ GD+ L+ M + D T+S
Sbjct: 905 QASARKLFDEMPHKNL----VTWNSILDAYAKSGDVVSARLVFDEMSER----DVVTWSS 956
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSG---AKQLLASMY 237
+ G + G N+A + +++ + + +++ +C +L K + +
Sbjct: 957 MIDGYVKRGEYNKALEIFDQMMR--MGSSKANEVTMVSVICACAHLGALNRGKTVHRYIL 1014
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
L ++ SLID + K G++ +A V+ + S ++ + +++N++I GL
Sbjct: 1015 DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYR--ASVKETDALMWNAIIGGLASHGFIR 1072
Query: 298 XXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
+ D IT+ L+ + G + EA+ F ++K +G Y ++
Sbjct: 1073 ESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMV 1132
Query: 357 NFLCKLGHIQQAKELMKVMILQ 378
+ L + G ++ A + + M ++
Sbjct: 1133 DVLSRAGLVKDAHDFISEMPIK 1154
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 104/250 (41%), Gaps = 7/250 (2%)
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
G R G F + SK + D +++N + + L R+ + K L+ +
Sbjct: 82 GFKRWGLAYLFFNWASK--QEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFM 139
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE-KPNLVLYNSVINGLCKEEXXXXXXXX 302
FG I G V+ A V++++ + G PN YN ++ + K
Sbjct: 140 SPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVE 199
Query: 303 XXXXXXMNL---FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ FD T ++ YCN+GK + A + + + G H + +++F
Sbjct: 200 ARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSF- 258
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
CK G + +A EL++++ + +Y TY +LI F K+ ++ +L + M G+
Sbjct: 259 CKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADI 318
Query: 420 QTYKAVVSPL 429
Y ++ L
Sbjct: 319 ALYDVLIGGL 328
>AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19608857-19610428 REVERSE
Length = 523
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 151/330 (45%), Gaps = 2/330 (0%)
Query: 106 RTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISS 165
+ + + YSRA EA R + M++ G+ + ++H L + +
Sbjct: 139 KVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK 198
Query: 166 MVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNN 225
I P TYSIL +G R + + A K ++LE N + D ++N L++ LC+S +
Sbjct: 199 AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 226 LSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNS 285
+ G ++ M GL PD +F I +C G+V +A +V ++M + PN+ +N
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 286 VINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAG 344
+I LCK E D TYN+++ +C+ +++ A M
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Query: 345 IAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF-SKKCSPEEV 403
+ TYN ++ L ++G +A E+ + M + F P TYT++I KK EE
Sbjct: 379 CLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEA 438
Query: 404 IKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ + M+ +G+ P+ T + + + L+ G
Sbjct: 439 CRYFEMMIDEGIPPYSTTVEMLRNRLVGWG 468
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 2/308 (0%)
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M + I+P + L+ C + A++ + IVP+ +TY+ L+ G++R R
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
A ++ DEM+++ V++ + YN ++ L GD++G + M + + PD ++++I
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
C G+V+ A+K ++ +L+ + ++ N +I LC++ + A LL M +G
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
PD T+ S++ HC V A ++ +M ++ P+ YN V+ L +
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRAT 403
Query: 301 XXXXXXXXMNLFD-VITYNTLINGYCN-SGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
+ V TY +I+G GK++EA + M + GI T L N
Sbjct: 404 EIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNR 463
Query: 359 LCKLGHIQ 366
L G +
Sbjct: 464 LVGWGQMD 471
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 4/221 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ ALCK + +F G+ P+ +F + I C G + A KV+ +M+
Sbjct: 247 NALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKR 306
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
Y + P+ T+N +I CK K+ A L +EM++K P+ TY +++ +
Sbjct: 307 ---YDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCE 363
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ A +L M + + + YN V+ L G + + + M + + P TY++
Sbjct: 364 VNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTV 423
Query: 181 LTKGLCR-NGNVNEAFKFHSKILENNLIEDAFSHNILINYL 220
+ GL R G + EA ++ +++ + + + +L N L
Sbjct: 424 MIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRL 464
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 4/192 (2%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+ I+A C + A V R ++ + PNV TFN II CK +D A ++ +M
Sbjct: 283 IFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQK 342
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
PD+ TYN ++ C ++ A KL + M +P+ TY ++ R
Sbjct: 343 GA---NPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRF 399
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWL-YVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ A + + M ++ Y +IH L +G +E M+D IPP T +
Sbjct: 400 DRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEM 459
Query: 181 LTKGLCRNGNVN 192
L L G ++
Sbjct: 460 LRNRLVGWGQMD 471
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I LCK K+ +A + ++ G P+ T+N I+ C ++ A K++S+M+
Sbjct: 317 NHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDR 376
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
PD TYN ++ ++G+ A ++ M E+ P V TY +I G R +
Sbjct: 377 TKCL---PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
Query: 121 -LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSM 166
LEEA R + M+ +G+ S + + L G M+ V +L M
Sbjct: 434 KLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
>AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28086800-28089367 FORWARD
Length = 855
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 145/290 (50%), Gaps = 7/290 (2%)
Query: 107 TYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSM 166
TY T++ RA+ E +L DEM++ G N+V YN +IH ++ + + M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 167 VDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNL 226
+ PD+ TY L + G ++ A + ++ E L D F+++++IN L ++ +L
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 227 SGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSV 286
A +L M +G P++VTF +I H K N E A+++Y M +G +P+ V Y+ V
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 287 IN--GLCK--EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKN 342
+ G C EE + D Y L++ + +G +D+A+ + AM
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNW---VPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 343 AGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
AG+ N T N+L++ ++ + +A L++ M+ G P TYT+L++
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 132/252 (52%), Gaps = 3/252 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I++ + L EAM+VF + + G P+ VT+ +ID+ K G +D+A+ + +M+
Sbjct: 398 NRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQE 457
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ PD+ TY+ +I K G L A +L EM+ + PN+ T+ +I +++AR+
Sbjct: 458 A---GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARN 514
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
E A +L +M G + V Y+ V+ L G +E + + M PD+ Y +
Sbjct: 515 YETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGL 574
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + GNV++A++++ +L+ L + + N L++ R + +S A LL SM G
Sbjct: 575 LVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALG 634
Query: 241 LVPDIVTFGSLI 252
L P + T+ L+
Sbjct: 635 LHPSLQTYTLLL 646
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%)
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
+P+++TYN LI + + L A + N+M E P+ TY TLID +++A L+ A
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMD 450
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLC 186
+ M + GL ++ Y+ +I+ L G + L MV P+ T++I+
Sbjct: 451 MYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHA 510
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
+ N A K + + D +++I++ L L A+ + A M + VPD
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP 570
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN 288
+G L+D K GNV+ A Q Y+ M+++G +PN+ NS+++
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLS 612
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
D TY+ + L R E K +++ + + ++N LI+ R+N L A +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 234 ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
M G PD VT+ +LID H K G ++ A+ +Y++M ++G P+ Y+ +IN L K
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 294 EXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
+++T+N +I + + + A M+NAG + TY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVL 412
+ ++ L G +++A+ + M + +VPD Y +L+ + K + ++ + + M+
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 413 KGVIPHKQTYKAVVSPLLQ 431
G+ P+ T +++S L+
Sbjct: 598 AGLRPNVPTCNSLLSTFLR 616
>AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7029701-7031314 FORWARD
Length = 537
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 161/356 (45%), Gaps = 37/356 (10%)
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
YN +I K+ + +A L + M +++ ++ T+ LI Y RA EA + M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
G V + + ++ VI L + S+ D R PD Y+ L +G CR G ++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEIS 272
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
EA K ++ + + ++++I+I+ LCR +S A + A M G P+ +TF +L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF 312
H K G E +QVY +M K G +P+ + YN +I C++E NL
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDE---------------NLE 377
Query: 313 DVI-TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
+ + NT+I C N +T+NT+ ++ K + A +
Sbjct: 378 NAVKVLNTMIKKKCE--------------------VNASTFNTIFRYIEKKRDVNGAHRM 417
Query: 372 MKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
M+ P+ +TY IL+ F S + V+K+ M K V P+ TY+ +V+
Sbjct: 418 YSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVT 473
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 169/385 (43%), Gaps = 8/385 (2%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSV-YSIRPDSITYNCLIGGFCKMGKLTMAEKLK 93
+N +ID++ K+ DLA ++ M+ +V SI T+ LI + + G + A
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIE----TFTILIRRYVRAGLASEAVHCF 209
Query: 94 NEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
N M + VP+ ++ +I SR R EA D + K + ++Y ++
Sbjct: 210 NRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRA 268
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
G++ + M I P+ +TYSI+ LCR G ++ A + +L++ +A +
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
N L+ ++ Q+ M G PD +T+ LI+ HC++ N+ENAV+V M+K
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 274 SGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDE 332
+ N +N++ + K+ + +TYN L+ + S D
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 333 AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQG-FVPDYITYTILI 391
M + + N TY L+ C +GH A +L K M+ + P Y +++
Sbjct: 449 VLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVL 508
Query: 392 TSFSKKCSPEEVIKLHDYMVLKGVI 416
+ ++ +L + M+ KG++
Sbjct: 509 AQLRRAGQLKKHEELVEKMIQKGLV 533
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 159/368 (43%), Gaps = 39/368 (10%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
EA+ F R +G P+ + F+++I + A ++ PD I Y
Sbjct: 204 EAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK----DRFEPDVIVYT 259
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
L+ G+C+ G+++ AEK+ EM I PNV TY+ +ID R + A + +M+
Sbjct: 260 NLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDS 319
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
G N++ +N ++ G E V + + M PD TY+ L + CR+ N+ A
Sbjct: 320 GCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENA 379
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
K + +++ +A + N + Y+ + +++GA ++ + M P+ VT+ L+
Sbjct: 380 VKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRM 439
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDV 314
+ + +++ ++M +PN V
Sbjct: 440 FVGSKSTDMVLKMKKEMDDKEVEPN----------------------------------V 465
Query: 315 ITYNTLINGYCNSGKIDEAFA-FSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
TY L+ +C G + A+ F ++ + + + Y ++ L + G +++ +EL++
Sbjct: 466 NTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVE 525
Query: 374 VMILQGFV 381
MI +G V
Sbjct: 526 KMIQKGLV 533
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 153/293 (52%), Gaps = 9/293 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++VI L ++ + EA S F+ SLK P+V+ + ++ C+ G + A KV +M++
Sbjct: 225 SIVISNLSRKRRASEAQS-FFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKL 283
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
I P+ TY+ +I C+ G+++ A + +M++ PN T+ L+ + +A
Sbjct: 284 AG---IEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
E+ ++ ++M K G +++ YN +I + ++E ++++M+ + + T++
Sbjct: 341 TEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ + + + +VN A + +SK++E + ++NIL+ S + ++ M +
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKE 460
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEK---PNLVLYNSVINGL 290
+ P++ T+ L+ C G+ NA +++++M++ EK P+L LY V+ L
Sbjct: 461 VEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVE--EKCLTPSLSLYEMVLAQL 511
>AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19896027-19897442 FORWARD
Length = 471
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 136/284 (47%), Gaps = 4/284 (1%)
Query: 10 ECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPD 69
+C LE M S+ P+ T+N++I + G D ALK+ +M V +P
Sbjct: 130 KCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKV---KPT 186
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMME-KDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
+T+ LI G CK ++ A K+K++M++ + P V YA+LI + L AF+L
Sbjct: 187 GVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLK 246
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
DE + + +++ IY+T+I L G VS+++ M + PD TY++L G C
Sbjct: 247 DEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVE 306
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
+ A + +++E L D S+N+++ R A L M RG PD +++
Sbjct: 307 NDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
+ DG C+ E A + ++M+ G KP + LC+
Sbjct: 367 RIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCE 410
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 3/293 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I+ + +A+ +F +K + P VTF +I CK + ALK+ K ++
Sbjct: 156 NILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM--KHDM 213
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ VY +RP Y LI C++G+L+ A KLK+E E I + Y+TLI +A
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
E + +EM +KG ++V YN +I+ VE D E + ++ MV+ + PD +Y++
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ R EA + D S+ I+ + LC A +L M +G
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
P + C+ G +E +V + + G + +++ +I +CKE
Sbjct: 394 YKPRRDRLEGFLQKLCESGKLEILSKVISSLHR-GIAGDADVWSVMIPTMCKE 445
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 145/312 (46%), Gaps = 5/312 (1%)
Query: 90 EKLKNEMMEKDIV--PNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVI 147
EK+K + D P+ TY LI G S++ ++A +L DEM+KK + V + T+I
Sbjct: 135 EKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLI 194
Query: 148 HWLYVEGDMEGVSLLISSMVD-NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
H L + ++ + M+ + P Y+ L K LC+ G ++ AFK + E +
Sbjct: 195 HGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKI 254
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
DA ++ LI+ L ++ + +L M +G PD VT+ LI+G C E + E+A +
Sbjct: 255 KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANR 314
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYC 325
V ++M++ G KP+++ YN ++ + + D ++Y + +G C
Sbjct: 315 VLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC 374
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
+ +EA M G + LC+ G ++ +++ + +G D
Sbjct: 375 EGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDAD 433
Query: 386 TYTILITSFSKK 397
++++I + K+
Sbjct: 434 VWSVMIPTMCKE 445
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 169/389 (43%), Gaps = 7/389 (1%)
Query: 51 ALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMM----EKDIVPNVR 106
A+K+ + S RP + C K+G M ++L ++ + IVP
Sbjct: 25 AMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEI 84
Query: 107 TYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSM 166
+ +I+ + R + A + DEM + N+++ L G++E + +SS
Sbjct: 85 IFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSS- 143
Query: 167 VDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNL 226
+D PD TY+IL G ++G ++A K ++++ + + LI+ LC+ + +
Sbjct: 144 IDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRV 203
Query: 227 SGAKQLLASMY-VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNS 285
A ++ M V G+ P + + SLI C+ G + A ++ ++ + K + +Y++
Sbjct: 204 KEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYST 263
Query: 286 VINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAG 344
+I+ L K D +TYN LING+C + A M G
Sbjct: 264 LISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG 323
Query: 345 IAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVI 404
+ + +YN ++ ++ ++A L + M +G PD ++Y I+ + EE
Sbjct: 324 LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAA 383
Query: 405 KLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ D M+ KG P + + + L + G
Sbjct: 384 VILDEMLFKGYKPRRDRLEGFLQKLCESG 412
>AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEE40 (maternal
effect embryo arrest 40) (TAIR:AT3G53700.1); Has 16848
Blast hits to 5324 proteins in 149 species: Archae - 2;
Bacteria - 6; Metazoa - 176; Fungi - 119; Plants -
16112; Viruses - 0; Other Eukaryotes - 433 (source: NCBI
BLink). | chr1:5760793-5762619 FORWARD
Length = 608
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 174/362 (48%), Gaps = 7/362 (1%)
Query: 19 VFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIG 78
V R + G +PN F I+ + C+ G + A +VV M + S S+ + ++ L+
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLM-ICSGISVSVN--VWSMLVS 255
Query: 79 GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVM 138
GF + G+ A L N+M++ PN+ TY +LI G+ ++EAF + ++ +GL
Sbjct: 256 GFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAP 315
Query: 139 NSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFH 198
+ V+ N +IH G E + +S+ ++ PD++T++ + LC +G + +
Sbjct: 316 DIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRIT 375
Query: 199 SKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
I + D + N+L N + S A ++L+ M + D T+ + C+
Sbjct: 376 HGIGTDF---DLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRG 432
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK-EEXXXXXXXXXXXXXXMNLFDVITY 317
G A+++Y+ ++K + + ++++I+ L + + DV++Y
Sbjct: 433 GAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSY 492
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
I G + +I+EA++ MK GI N TY T+I+ LCK ++ +++++ I
Sbjct: 493 TVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQ 552
Query: 378 QG 379
+G
Sbjct: 553 EG 554
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 180/419 (42%), Gaps = 8/419 (1%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
+A+ V+ G PN NM++DV K+ ++ AL++ + + +S ++++
Sbjct: 126 KAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSF-DIALSHF 184
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
C GG G L + + M+ + PN + ++ R + EAF++ M+
Sbjct: 185 CSRGG---RGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICS 241
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
G+ ++ +++ ++ + G+ + L + M+ P+ TY+ L KG G V+EA
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
F SK+ L D N++I+ R A+++ S+ R LVPD TF S++
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FD 313
C G + ++ + G +LV N + N K + D
Sbjct: 362 LCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALD 418
Query: 314 VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
TY ++ C G A + + ++ +I+ L +LG A L K
Sbjct: 419 CYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFK 478
Query: 374 VMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
IL+ + D ++YT+ I + EE L M G+ P+++TY+ ++S L +E
Sbjct: 479 RCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKE 537
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 153 EGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFS 212
GD+ GV +++ M+ P++ + + + CR G V+EAF+ ++ + +
Sbjct: 190 RGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNV 249
Query: 213 HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMM 272
++L++ RS A L M G P++VT+ SLI G G V+ A V K+
Sbjct: 250 WSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQ 309
Query: 273 KSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKID 331
G P++VL N +I+ + L D T+ ++++ C SGK D
Sbjct: 310 SEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFD 369
Query: 332 EAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
+ + G + T N L N K+G+ A +++ +M + F D TYT+ +
Sbjct: 370 LVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYL 426
Query: 392 TSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
++ + +P IK++ ++ + + A++ L++ G
Sbjct: 427 SALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELG 468
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 6/280 (2%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
+A+ +F + ++ G PN+VT+ +I +G +D A V+SK++ + PD + N
Sbjct: 265 KAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEG---LAPDIVLCN 321
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
+I + ++G+ A K+ + ++ +VP+ T+A+++ + + R+ +
Sbjct: 322 LMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI--- 378
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
G + V N + + G ++S M D +TY++ LCR G A
Sbjct: 379 GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAA 438
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
K + I++ DA H+ +I+ L + A L + D+V++ I G
Sbjct: 439 IKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKG 498
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
+ +E A + M + G PN Y ++I+GLCKE+
Sbjct: 499 LVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEK 538
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 98/237 (41%), Gaps = 37/237 (15%)
Query: 200 KILENNLIEDAFSHNILINYLCRSN---NLSGAKQLLASMYVRGLVPDIVTFGSLIDGHC 256
+I E + FS +I +++ C +L G K +L M G P+ FG ++ C
Sbjct: 164 EIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCC 223
Query: 257 KEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVIT 316
+ G V A QV M+ SG + V
Sbjct: 224 RTGCVSEAFQVVGLMICSGISVS----------------------------------VNV 249
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
++ L++G+ SG+ +A M G + N TY +LI LG + +A ++ +
Sbjct: 250 WSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQ 309
Query: 377 LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+G PD + ++I ++++ EE K+ + + ++P + T+ +++S L G
Sbjct: 310 SEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 6/244 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I+ + + EA VF K + P+ TF I+ C G DL ++ +
Sbjct: 321 NLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI-- 378
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
D +T N L F K+G + A K+ + M KD + TY + R +
Sbjct: 379 ----GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGA 434
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
A ++ ++K+ +++ ++ +I L G L + + P D +Y++
Sbjct: 435 PRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTV 494
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
KGL R + EA+ + E + + ++ +I+ LC+ +++L G
Sbjct: 495 AIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEG 554
Query: 241 LVPD 244
+ D
Sbjct: 555 VELD 558
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 34 TFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLK 93
T+ + + C+ GA A+K+ +++ D+ ++ +I ++GK A L
Sbjct: 421 TYTVYLSALCRGGAPRAAIKM---YKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLF 477
Query: 94 NEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
+ + +V +Y I G RA+ +EEA+ LC +M + G+ N Y T+I L E
Sbjct: 478 KRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKE 537
Query: 154 GDMEGVSLLISSMVDNRI---PPDKF-TYSILTKGLCRNGNVNEAF-KFHSKILENNLIE 208
+ E V ++ + + P KF YS+L++ F K+ S+ EN +
Sbjct: 538 KETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYRGDFSEFRSVFEKWKSEFTENVDVS 597
Query: 209 DA 210
D+
Sbjct: 598 DS 599
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 146/290 (50%), Gaps = 7/290 (2%)
Query: 107 TYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSM 166
TY T++ RA+ +L DEM++ G N+V YN +IH + + + M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 167 VDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNL 226
+ PD+ TY L + G ++ A + ++ L D F+++++IN L ++ +L
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 227 SGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSV 286
A +L M +G P++VT+ ++D H K N +NA+++Y M +G +P+ V Y+ V
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 287 IN--GLCK--EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKN 342
+ G C EE + D Y L++ + +G +++A+ + AM +
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNW---IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 343 AGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
AG+ N T N+L++ ++ I +A EL++ M+ G P TYT+L++
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 144/278 (51%), Gaps = 4/278 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I++ + L EAM+VF + + G P+ VT+ +ID+ K G +D+A+ + +M+
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ PD+ TY+ +I K G L A KL EM+++ PN+ TY ++D +++AR+
Sbjct: 463 GG---LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ A +L +M G + V Y+ V+ L G +E + + M PD+ Y +
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + GNV +A++++ +L L + + N L++ R N ++ A +LL +M G
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKP 278
L P + T+ +L+ C +G + + ++M S P
Sbjct: 640 LRPSLQTY-TLLLSCCTDGRSKLDMGFCGQLMASTGHP 676
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 147/355 (41%), Gaps = 36/355 (10%)
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
+P+++TYN LI + + L A + N+M E P+ TY TLID +++A L+ A
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLC 186
+ M GL ++ Y+ +I+ L G + L MVD P+ TY+I+
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
+ N A K + + D +++I++ L L A+ + M + +PD
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXX 306
+G L+D K GNVE A Q Y+ M+ +G +PN+ NS+++ +
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 307 XXMNLFDVITYNTLINGYCNSG--KIDEAFA-------------FSFAMKNAGIAA---- 347
+ L + TL+ C G K+D F F M AG
Sbjct: 636 LALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVR 695
Query: 348 NHAT-----------------YNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
NHA + +++FL K G ++A + +V + PD +
Sbjct: 696 NHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 9/272 (3%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
KLL+ M ++ G PN VT+N +I + ++ A+ V ++M+ +PD +
Sbjct: 385 KLLDEM------VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGC---KPDRV 435
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
TY LI K G L +A + M + P+ TY+ +I+ +A L A +L EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
+ +G N V YN ++ + + L M + PDK TYSI+ + L G +
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
EA +++ + N I D + +L++ ++ N+ A Q +M GL P++ T SL
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLY 283
+ + + A ++ + M+ G +P+L Y
Sbjct: 616 LSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 121/259 (46%), Gaps = 1/259 (0%)
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
D TY+ + L R K +++ + + ++N LI+ R+N L+ A +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 234 ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
M G PD VT+ +LID H K G ++ A+ +Y++M G P+ Y+ +IN L K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 294 EXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
+++TYN +++ + + A M+NAG + TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVL 412
+ ++ L G++++A+ + M + ++PD Y +L+ + K + E+ + + M+
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 413 KGVIPHKQTYKAVVSPLLQ 431
G+ P+ T +++S L+
Sbjct: 603 AGLRPNVPTCNSLLSTFLR 621
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 146/290 (50%), Gaps = 7/290 (2%)
Query: 107 TYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSM 166
TY T++ RA+ +L DEM++ G N+V YN +IH + + + M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 167 VDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNL 226
+ PD+ TY L + G ++ A + ++ L D F+++++IN L ++ +L
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 227 SGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSV 286
A +L M +G P++VT+ ++D H K N +NA+++Y M +G +P+ V Y+ V
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 287 IN--GLCK--EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKN 342
+ G C EE + D Y L++ + +G +++A+ + AM +
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNW---IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 343 AGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
AG+ N T N+L++ ++ I +A EL++ M+ G P TYT+L++
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 144/278 (51%), Gaps = 4/278 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I++ + L EAM+VF + + G P+ VT+ +ID+ K G +D+A+ + +M+
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ PD+ TY+ +I K G L A KL EM+++ PN+ TY ++D +++AR+
Sbjct: 463 GG---LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ A +L +M G + V Y+ V+ L G +E + + M PD+ Y +
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + GNV +A++++ +L L + + N L++ R N ++ A +LL +M G
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKP 278
L P + T+ +L+ C +G + + ++M S P
Sbjct: 640 LRPSLQTY-TLLLSCCTDGRSKLDMGFCGQLMASTGHP 676
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 147/355 (41%), Gaps = 36/355 (10%)
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
+P+++TYN LI + + L A + N+M E P+ TY TLID +++A L+ A
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLC 186
+ M GL ++ Y+ +I+ L G + L MVD P+ TY+I+
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
+ N A K + + D +++I++ L L A+ + M + +PD
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXX 306
+G L+D K GNVE A Q Y+ M+ +G +PN+ NS+++ +
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 307 XXMNLFDVITYNTLINGYCNSG--KIDEAFA-------------FSFAMKNAGIAA---- 347
+ L + TL+ C G K+D F F M AG
Sbjct: 636 LALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVR 695
Query: 348 NHAT-----------------YNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
NHA + +++FL K G ++A + +V + PD +
Sbjct: 696 NHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 9/272 (3%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
KLL+ M ++ G PN VT+N +I + ++ A+ V ++M+ +PD +
Sbjct: 385 KLLDEM------VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGC---KPDRV 435
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
TY LI K G L +A + M + P+ TY+ +I+ +A L A +L EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
+ +G N V YN ++ + + L M + PDK TYSI+ + L G +
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
EA +++ + N I D + +L++ ++ N+ A Q +M GL P++ T SL
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLY 283
+ + + A ++ + M+ G +P+L Y
Sbjct: 616 LSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 121/259 (46%), Gaps = 1/259 (0%)
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
D TY+ + L R K +++ + + ++N LI+ R+N L+ A +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 234 ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
M G PD VT+ +LID H K G ++ A+ +Y++M G P+ Y+ +IN L K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 294 EXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
+++TYN +++ + + A M+NAG + TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVL 412
+ ++ L G++++A+ + M + ++PD Y +L+ + K + E+ + + M+
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 413 KGVIPHKQTYKAVVSPLLQ 431
G+ P+ T +++S L+
Sbjct: 603 AGLRPNVPTCNSLLSTFLR 621
>AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15637177-15639450 REVERSE
Length = 757
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 199/480 (41%), Gaps = 54/480 (11%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N + + + + + A F + + G+ P T+N+++ ++ AL+ E
Sbjct: 224 NSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRF---FED 280
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M I PD T+N +I GFC+ K+ AEKL EM I P+V +Y T+I GY
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWL-----YVE---------------------- 153
+++ R+ +EM G+ N+ Y+T++ L VE
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFL 400
Query: 154 ---------GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
GDM + ++ +M +P + Y +L + C+ N A K ++E
Sbjct: 401 KLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEK 460
Query: 205 NLI---EDAF-----SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHC 256
+I +D ++N +I YLC + + A+ L + RG V D +LI GH
Sbjct: 461 EIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG-VQDQDALNNLIRGHA 519
Query: 257 KEGNVENAVQVYEKMMKSGEKPNLVLYNSVING-LCKEEXXXXXXXXXXXXXXMNLFDVI 315
KEGN +++ ++ + M + G Y +I + K E ++ D
Sbjct: 520 KEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSS 579
Query: 316 TYNTLINGYCNSGKIDEAFAFSFAM--KNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
+ ++I G++ A M KN GI N ++ L GH+++A +
Sbjct: 580 LFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRID 639
Query: 374 VMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
++ G D + L++ S+K +KL D+ + + + +Y V+ LL G
Sbjct: 640 LLNQNGHTADLDS---LLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAG 696
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/447 (19%), Positives = 168/447 (37%), Gaps = 79/447 (17%)
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
IR D T+ +I ++ KL A + +M EK + + + LI+ Y +A ++E+
Sbjct: 146 IRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESV 205
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
++ +M G+ YN++ + G + MV + P + TY+++ G
Sbjct: 206 KIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGF 265
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
+ + A +F + + D + N +IN CR + A++L M + P +
Sbjct: 266 FLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSV 325
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC-------------- 291
V++ ++I G+ V++ ++++E+M SG +PN Y++++ GLC
Sbjct: 326 VSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKN 385
Query: 292 -------------------KEEXXXXXXXXXXXXXXMNLFDVIT----YNTLINGYCNSG 328
+ M +V Y LI C +
Sbjct: 386 MMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKAS 445
Query: 329 KIDEAFAFSFAMKNAGIAANH--------ATYNTLINFLCKLGHIQQAK----------- 369
+ A + I H + YN +I +LC G +A+
Sbjct: 446 AYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGV 505
Query: 370 -----------------------ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKL 406
E++K+M +G + Y +LI S+ K P +
Sbjct: 506 QDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTA 565
Query: 407 HDYMVLKGVIPHKQTYKAVVSPLLQEG 433
D MV G +P +++V+ L ++G
Sbjct: 566 LDSMVEDGHVPDSSLFRSVIESLFEDG 592
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 144/321 (44%), Gaps = 9/321 (2%)
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSV-IYNTVIHW 149
+L+N + +D+VP ++ + + A+ LE A + + GL+ + + +I
Sbjct: 103 RLQNSI--RDLVPEW-DHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKM 159
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
L + ++ M + +P D+ + +L + + G V E+ K K+ + +
Sbjct: 160 LGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERT 219
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
S+N L + R AK+ M G+ P T+ ++ G +E A++ +E
Sbjct: 220 IKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFE 279
Query: 270 KMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSG 328
M G P+ +N++ING C+ + + V++Y T+I GY
Sbjct: 280 DMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD 339
Query: 329 KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP-DYITY 387
++D+ M+++GI N TY+TL+ LC G + +AK ++K M+ + P D +
Sbjct: 340 RVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIF 399
Query: 388 TILITSFSKK---CSPEEVIK 405
L+ S SK + EV+K
Sbjct: 400 LKLLVSQSKAGDMAAATEVLK 420
>AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein
(TAIR:AT5G65820.1); Has 25923 Blast hits to 13097
proteins in 1477 species: Archae - 105; Bacteria - 3757;
Metazoa - 995; Fungi - 405; Plants - 17052; Viruses -
21; Other Eukaryotes - 3588 (source: NCBI BLink). |
chr3:18445730-18447646 REVERSE
Length = 638
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 161/346 (46%), Gaps = 5/346 (1%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
P ++ + + + + + ++ K V ++ M Y + PD + CL+ CK G + A
Sbjct: 162 PELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEA 221
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
K+ +M EK PN+R + +L+ G+ R L EA + +M + GL + V++ ++
Sbjct: 222 SKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSG 280
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR-NGNVNEAFKFHSKILENNLIE 208
G M L++ M P+ Y++L + LCR ++EA + ++
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEA 340
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D ++ LI+ C+ + +L M +G++P VT+ ++ H K+ E +++
Sbjct: 341 DIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELI 400
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD-VITYNTLINGYCNS 327
EKM + G P+L++YN VI CK L V T+ +ING+ +
Sbjct: 401 EKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQ 460
Query: 328 GKIDEAFAFSFAMKNAGI--AANHATYNTLINFLCKLGHIQQAKEL 371
G + EA M + GI A + T +L+N L + ++ AK++
Sbjct: 461 GFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 132/278 (47%), Gaps = 29/278 (10%)
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI-----LINYLCRSNN 225
+ PD++ + L LC+NG+V EA SK+ E+ + + F N+ L+ CR
Sbjct: 198 LEPDEYVFGCLLDALCKNGSVKEA----SKVFED--MREKFPPNLRYFTSLLYGWCREGK 251
Query: 226 LSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNS 285
L AK++L M GL PDIV F +L+ G+ G + +A + M K G +PN+ Y
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 286 VINGLCKEEXXXXXXXXXXXXXXMNLF----------DVITYNTLINGYCNSGKIDEAFA 335
+I LC+ E M +F D++TY LI+G+C G ID+ ++
Sbjct: 312 LIQALCRTEKRMDEA--------MRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYS 363
Query: 336 FSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFS 395
M+ G+ + TY ++ K ++ EL++ M +G PD + Y ++I
Sbjct: 364 VLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLAC 423
Query: 396 KKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
K +E ++L + M G+ P T+ +++ +G
Sbjct: 424 KLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 167/388 (43%), Gaps = 10/388 (2%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
+A+ V K+G+ P+ F ++D CK G++ A KV M P+ +
Sbjct: 185 KAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR----EKFPPNLRYFT 240
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
L+ G+C+ GKL A+++ +M E + P++ + L+ GY+ A + +A+ L ++M K+
Sbjct: 241 SLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR 300
Query: 135 GLVMNSVIYNTVIHWL-YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNE 193
G N Y +I L E M+ + M D TY+ L G C+ G +++
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 194 AFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLID 253
+ + + ++ ++ ++ + +L+ M RG PD++ + +I
Sbjct: 361 GYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIR 420
Query: 254 GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD 313
CK G V+ AV+++ +M +G P + + +ING + +F
Sbjct: 421 LACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFS 480
Query: 314 VITYNT---LINGYCNSGKIDEA--FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
Y T L+N K++ A + K + N + + I+ L GH+++A
Sbjct: 481 APQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEA 540
Query: 369 KELMKVMILQGFVPDYITYTILITSFSK 396
M+ +P TY L+ +K
Sbjct: 541 CSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 8/286 (2%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKM-GAMDLALKVVSKMEVMSVYSIRPDS 70
K+ +A + K G PNV + ++I C+ MD A++V +ME Y D
Sbjct: 286 KMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER---YGCEADI 342
Query: 71 ITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDE 130
+TY LI GFCK G + + ++M +K ++P+ TY ++ + + EE L ++
Sbjct: 343 VTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEK 402
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGN 190
M ++G + +IYN VI G+++ L + M N + P T+ I+ G G
Sbjct: 403 MKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF 462
Query: 191 VNEAFKFHSKILENNLIEDAFSHNI--LINYLCRSNNLSGAKQLLA--SMYVRGLVPDIV 246
+ EA +++ + + L+N L R + L AK + + S ++
Sbjct: 463 LIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVS 522
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
+ I +G+V+ A MM+ P Y ++ GL K
Sbjct: 523 AWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 114/299 (38%), Gaps = 89/299 (29%)
Query: 1 NVVIYALCK-ECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM- 58
V+I ALC+ E ++ EAM VF ++G ++VT+ +I CK G +D V+ M
Sbjct: 310 TVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 59 -------------------------------EVMSVYSIRPDSITYNCLIGGFCKMGKLT 87
E M PD + YN +I CK+G++
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 88 MAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGL-------VMNS 140
A +L NEM + P V T+ +I+G++ L EA EM+ +G+ + S
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKS 489
Query: 141 VIYNTV--------------------------------IHWLYVEGDMEGVSLLISSMVD 168
++ N V IH LY +G ++ M++
Sbjct: 490 LLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMME 549
Query: 169 NRIPPDKFTYSILTKGLCR------NGNVNE-----------AFKFHSKILENNLIEDA 210
+ P TY+ L KGL + + E +FK + K E +LIE A
Sbjct: 550 MDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMSFKMYKKKGEEDLIEKA 608
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 181/415 (43%), Gaps = 41/415 (9%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
EA+ V + +G+ P++VT N+++ A K G K +S E+M +RPD+ T+N
Sbjct: 99 EALEVCKKMTDNGVGPDLVTHNIVLS-AYKSGRQ--YSKALSYFELMKGAKVRPDTTTFN 155
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEK--DIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
+I K+G+ + A L N M EK + P+V
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDV--------------------------- 188
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
V + +++H V+G++E + +MV + P+ +Y+ L +G
Sbjct: 189 --------VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 240
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
A I +N +I D S+ L+N RS AK++ M P++VT+ +LI
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL- 311
D + G + AV+++ +M + G KPN+V +++ + + +
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 360
Query: 312 FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
+ YN+ I Y N+ ++++A A +M+ + A+ T+ LI+ C++ +A
Sbjct: 361 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 420
Query: 372 MKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
+K M Y+ ++ ++SK+ E + + M + G P Y +++
Sbjct: 421 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 475
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 147/342 (42%), Gaps = 5/342 (1%)
Query: 58 MEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR 117
M++ Y R D YN +I + + A L EM + P+ TY LI+ + R
Sbjct: 1 MKIQKNYCARND--IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGR 58
Query: 118 ARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFT 177
A A L D+M++ + + YN +I+ G+ + M DN + PD T
Sbjct: 59 AGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVT 118
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
++I+ ++A + + + D + NI+I L + S A L SM
Sbjct: 119 HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR 178
Query: 238 VRGL--VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
+ PD+VTF S++ + +G +EN V+E M+ G KPN+V YN+++
Sbjct: 179 EKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGM 238
Query: 296 XXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNT 354
+ DV++Y L+N Y S + +A M+ N TYN
Sbjct: 239 SGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 298
Query: 355 LINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
LI+ G + +A E+ + M G P+ ++ L+ + S+
Sbjct: 299 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 177/417 (42%), Gaps = 4/417 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+V+ A + +A+S F + P+ TFN+II K+G AL + + M
Sbjct: 120 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
RPD +T+ ++ + G++ + M+ + + PN+ +Y L+ Y+
Sbjct: 180 KRA-ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGM 238
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMV-DNRIPPDKFTYS 179
A + ++ + G++ + V Y +++ Y G + + M+ R P+ TY+
Sbjct: 239 SGTALSVLGDIKQNGIIPDVVSYTCLLN-SYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 297
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L NG + EA + ++ ++ + + S L+ RS +L++ R
Sbjct: 298 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR 357
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+ + + S I + +E A+ +Y+ M K K + V + +I+G C+
Sbjct: 358 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 417
Query: 300 XXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
+++ Y++++ Y G++ EA + MK AG + Y ++++
Sbjct: 418 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 477
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
+A EL M G PD I + L+ +F+K P V L D M K +
Sbjct: 478 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 534
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/422 (19%), Positives = 174/422 (41%), Gaps = 44/422 (10%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
A+SV ++GI P+VV++ +++ G K +M +P+ +TYN
Sbjct: 242 ALSVLGDIKQNGIIPDVVSYTCLLN---SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 298
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
LI + G L A ++ +M + I PNV + TL+ SR++ + +G
Sbjct: 299 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 358
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
+ +N+ YN+ I ++E L SM ++ D T++IL G CR EA
Sbjct: 359 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 418
Query: 196 KFHSKI--LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLID 253
+ ++ L L ++ +S ++L Y + ++ A+ + M + G PD++ + S++
Sbjct: 419 SYLKEMEDLSIPLTKEVYS-SVLCAY-SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 476
Query: 254 GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK--------------------- 292
+ A +++ +M +G +P+ + ++++ K
Sbjct: 477 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPF 536
Query: 293 ---------------EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFS 337
+E + + N +++ + SGK++
Sbjct: 537 TGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLF 596
Query: 338 FAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK 397
+ + +G+ N TY L+ L +G+ ++ E+++ M G P Y +I SF ++
Sbjct: 597 YKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII-SFGER 655
Query: 398 CS 399
+
Sbjct: 656 SA 657
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 177/422 (41%), Gaps = 14/422 (3%)
Query: 18 SVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLI 77
+VF + G+ PN+V++N ++ G AL V+ ++ + PD ++Y CL+
Sbjct: 209 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII---PDVVSYTCLL 265
Query: 78 GGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLV 137
+ + + A+++ M ++ PNV TY LID Y L EA + +M + G+
Sbjct: 266 NSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 325
Query: 138 MNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKF 197
N V T++ V ++S+ I + Y+ + +A
Sbjct: 326 PNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 385
Query: 198 HSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK 257
+ + + + D+ + ILI+ CR + A L M + + S++ + K
Sbjct: 386 YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 445
Query: 258 EGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVIT 316
+G V A ++ +M +G +P+++ Y S+++ E + D I
Sbjct: 446 QGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 505
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
+ L+ + G+ F M+ I A + + + L ++A +L+++M
Sbjct: 506 CSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM- 564
Query: 377 LQGFVPDYITYTILITS-----FSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
++P + +I +T+ F K E ++KL ++ GV + +TY ++ LL
Sbjct: 565 -DPYLP---SLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLA 620
Query: 432 EG 433
G
Sbjct: 621 VG 622
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 130/291 (44%), Gaps = 9/291 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N I + +L +A++++ K + + VTF ++I +C+M A+ + +ME
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+S+ + Y+ ++ + K G++T AE + N+M P+V Y +++ Y+ +
Sbjct: 427 LSIPLTKE---VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK 483
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+A L EM G+ +S+ + ++ G V +L+ M + IP FT ++
Sbjct: 484 WGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIP---FTGAV 540
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFS---HNILINYLCRSNNLSGAKQLLASMY 237
+ + E + I + + S N +++ +S + +L +
Sbjct: 541 FFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKII 600
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN 288
G+ ++ T+ L++ GN ++V E M +G +P+ +Y +I+
Sbjct: 601 ASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 651
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
D TY+ LIN + +G+ A M A IA + +TYN LIN G+ ++A E+
Sbjct: 45 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 104
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
K M G PD +T+ I+++++ + + + M V P T+ ++
Sbjct: 105 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 158
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 185/429 (43%), Gaps = 41/429 (9%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I A EA+ V + +G+ P++VT N+++ A K G K +S E+
Sbjct: 217 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS-AYKSGRQ--YSKALSYFEL 273
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEK--DIVPNVRTYATLIDGYSRA 118
M +RPD+ T+N +I K+G+ + A L N M EK + P+V
Sbjct: 274 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV------------- 320
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
V + +++H V+G++E + +MV + P+ +Y
Sbjct: 321 ----------------------VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ L +G A I +N +I D S+ L+N RS AK++ M
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 418
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXX 298
P++VT+ +LID + G + AV+++ +M + G KPN+V +++ + +
Sbjct: 419 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN 478
Query: 299 XXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
+ + YN+ I Y N+ ++++A A +M+ + A+ T+ LI+
Sbjct: 479 VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 538
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
C++ +A +K M Y+ ++ ++SK+ E + + M + G P
Sbjct: 539 GSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP 598
Query: 418 HKQTYKAVV 426
Y +++
Sbjct: 599 DVIAYTSML 607
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 5/365 (1%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
F ++I + G ++L + V M++ Y R D YN +I + + A L
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARND--IYNMMIRLHARHNWVDQARGLFF 167
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG 154
EM + P+ TY LI+ + RA A L D+M++ + + YN +I+ G
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227
Query: 155 DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHN 214
+ + M DN + PD T++I+ ++A + + + D + N
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 287
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGL--VPDIVTFGSLIDGHCKEGNVENAVQVYEKMM 272
I+I L + S A L SM + PD+VTF S++ + +G +EN V+E M+
Sbjct: 288 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 273 KSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKID 331
G KPN+V YN+++ + DV++Y L+N Y S +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 332 EAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
+A M+ N TYN LI+ G + +A E+ + M G P+ ++ L+
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 392 TSFSK 396
+ S+
Sbjct: 468 AACSR 472
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 177/417 (42%), Gaps = 4/417 (0%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+V+ A + +A+S F + P+ TFN+II K+G AL + + M
Sbjct: 252 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
RPD +T+ ++ + G++ + M+ + + PN+ +Y L+ Y+
Sbjct: 312 KRA-ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGM 370
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMV-DNRIPPDKFTYS 179
A + ++ + G++ + V Y +++ Y G + + M+ R P+ TY+
Sbjct: 371 SGTALSVLGDIKQNGIIPDVVSYTCLLN-SYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L NG + EA + ++ ++ + + S L+ RS +L++ R
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR 489
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+ + + S I + +E A+ +Y+ M K K + V + +I+G C+
Sbjct: 490 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 549
Query: 300 XXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
+++ Y++++ Y G++ EA + MK AG + Y ++++
Sbjct: 550 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 609
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
+A EL M G PD I + L+ +F+K P V L D M K +
Sbjct: 610 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/422 (19%), Positives = 174/422 (41%), Gaps = 44/422 (10%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
A+SV ++GI P+VV++ +++ G K +M +P+ +TYN
Sbjct: 374 ALSVLGDIKQNGIIPDVVSYTCLLN---SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 430
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
LI + G L A ++ +M + I PNV + TL+ SR++ + +G
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 490
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
+ +N+ YN+ I ++E L SM ++ D T++IL G CR EA
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 550
Query: 196 KFHSKI--LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLID 253
+ ++ L L ++ +S ++L Y + ++ A+ + M + G PD++ + S++
Sbjct: 551 SYLKEMEDLSIPLTKEVYS-SVLCAY-SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 608
Query: 254 GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK--------------------- 292
+ A +++ +M +G +P+ + ++++ K
Sbjct: 609 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPF 668
Query: 293 ---------------EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFS 337
+E + + N +++ + SGK++
Sbjct: 669 TGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLF 728
Query: 338 FAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK 397
+ + +G+ N TY L+ L +G+ ++ E+++ M G P Y +I SF ++
Sbjct: 729 YKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII-SFGER 787
Query: 398 CS 399
+
Sbjct: 788 SA 789
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 177/422 (41%), Gaps = 14/422 (3%)
Query: 18 SVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLI 77
+VF + G+ PN+V++N ++ G AL V+ ++ + PD ++Y CL+
Sbjct: 341 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII---PDVVSYTCLL 397
Query: 78 GGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLV 137
+ + + A+++ M ++ PNV TY LID Y L EA + +M + G+
Sbjct: 398 NSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 457
Query: 138 MNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKF 197
N V T++ V ++S+ I + Y+ + +A
Sbjct: 458 PNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 517
Query: 198 HSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK 257
+ + + + D+ + ILI+ CR + A L M + + S++ + K
Sbjct: 518 YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 577
Query: 258 EGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVIT 316
+G V A ++ +M +G +P+++ Y S+++ E + D I
Sbjct: 578 QGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 637
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
+ L+ + G+ F M+ I A + + + L ++A +L+++M
Sbjct: 638 CSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM- 696
Query: 377 LQGFVPDYITYTILITS-----FSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
++P + +I +T+ F K E ++KL ++ GV + +TY ++ LL
Sbjct: 697 -DPYLP---SLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLA 752
Query: 432 EG 433
G
Sbjct: 753 VG 754
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 130/291 (44%), Gaps = 9/291 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N I + +L +A++++ K + + VTF ++I +C+M A+ + +ME
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+S+ + Y+ ++ + K G++T AE + N+M P+V Y +++ Y+ +
Sbjct: 559 LSIPLTKE---VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK 615
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+A L EM G+ +S+ + ++ G V +L+ M + IP FT ++
Sbjct: 616 WGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIP---FTGAV 672
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFS---HNILINYLCRSNNLSGAKQLLASMY 237
+ + E + I + + S N +++ +S + +L +
Sbjct: 673 FFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKII 732
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN 288
G+ ++ T+ L++ GN ++V E M +G +P+ +Y +I+
Sbjct: 733 ASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
D TY+ LIN + +G+ A M A IA + +TYN LIN G+ ++A E+
Sbjct: 177 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 236
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
K M G PD +T+ I+++++ + + + M V P T+ ++
Sbjct: 237 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 290
>AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006) |
chr5:20459238-20461504 FORWARD
Length = 723
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 180/412 (43%), Gaps = 13/412 (3%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA- 89
+V +N I D A +V M+ ++VY PD++T LI K G+
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVY---PDNVTCAILITTLRKAGRSAKEV 328
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
++ +M EK + + + L+ + EEA + EM KKG+ N+++YNT++
Sbjct: 329 WEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDA 388
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
+E V L + M D + P TY+IL R + ++ + L +
Sbjct: 389 YNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVR----GLVPDIVTFGSLIDGHCKEGNVENAV 265
S+ LI+ R+ +S + A ++R GL P ++ +LI + G E A
Sbjct: 449 VKSYTCLISAYGRTKKMS---DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAY 505
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDV-ITYNTLINGY 324
+E+M K G KP++ Y SV++ + + ITYNTL++G+
Sbjct: 506 ASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGF 565
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
G EA G+ + TYN L+N + G + +L+K M PD
Sbjct: 566 AKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDS 625
Query: 385 ITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGVET 436
ITY+ +I +F + + H MV G +P ++Y+ + + +L++ +T
Sbjct: 626 ITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRA-ILEDKAKT 676
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 132/287 (45%), Gaps = 4/287 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ A K + E +F G+ P+ T+N+++D + D+ ++ +ME
Sbjct: 383 NTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMED 442
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLT-MAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+ + P+ +Y CLI + + K++ MA M + + P+ +Y LI YS +
Sbjct: 443 LG---LEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
E+A+ +EM K+G+ + Y +V+ GD + + M+ +I + TY+
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYN 559
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L G + G EA S+ + L ++N+L+N R + QLL M
Sbjct: 560 TLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAAL 619
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSV 286
L PD +T+ ++I + + + A ++ M+KSG+ P+ Y +
Sbjct: 620 NLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 128/291 (43%), Gaps = 4/291 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
++ + C E EA+ + K GI N + +N ++D K ++ + ++M
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDK- 408
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
++P + TYN L+ + + + + E L EM + + PNV++Y LI Y R + +
Sbjct: 409 --GLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMS 466
Query: 123 E-AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+ A M K GL +S Y +IH V G E M I P TY+ +
Sbjct: 467 DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSV 526
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
R+G+ + + +L + ++N L++ + A+ +++ GL
Sbjct: 527 LDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGL 586
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
P ++T+ L++ + + G Q+ ++M KP+ + Y+++I +
Sbjct: 587 QPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVR 637
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 149/360 (41%), Gaps = 39/360 (10%)
Query: 80 FCKMGKLTMAEK---LKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGL 136
F +G+ MA+ L + + +K+ +VR Y I G S ++ ++A+ + + M K +
Sbjct: 245 FTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINV 304
Query: 137 VMNSVIYNTVIHWLYVEG-DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
++V +I L G + V + M + + + + L K C G EA
Sbjct: 305 YPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEAL 364
Query: 196 KFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGH 255
+++ + + + +N L++ +SN++ + L M +GL P T+ L+D +
Sbjct: 365 VIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAY 424
Query: 256 CKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVI 315
+ + + +M G +PN V
Sbjct: 425 ARRMQPDIVETLLREMEDLGLEPN----------------------------------VK 450
Query: 316 TYNTLINGYCNSGKIDEAFAFSF-AMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
+Y LI+ Y + K+ + A +F MK G+ + +Y LI+ G ++A +
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 375 MILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
M +G P TYT ++ +F + +++++ M+ + + + TY ++ ++G+
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 202/495 (40%), Gaps = 69/495 (13%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+V+ AL + K E + +G+ P T+ M++DV K G + AL + M
Sbjct: 149 NIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQ 208
Query: 61 MSVYSIRPDSITYNCLI----------------GGFC----------------------- 81
+ PD +T ++ G+C
Sbjct: 209 RMHF---PDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSP 265
Query: 82 ------------KMGKLTMAEKLKNEMMEKDIVPN----VRTYATLIDGYSRARSLEEAF 125
K+G EK + D P T+ TLID Y +A L +A
Sbjct: 266 VNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAA 325
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
L EM+K G+ +++V +NT+IH G + L+ M + I PD TY+IL
Sbjct: 326 NLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLH 385
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
G++ A +++ KI + L D +H +++ LC+ ++ + ++A M + D
Sbjct: 386 ADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDE 445
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK--EEXXXXXXXXX 303
+ ++ + EG V A ++E+ + + VL ++ + + E
Sbjct: 446 HSVPVIMQMYVNEGLVVQAKALFERF-----QLDCVLSSTTLAAVIDVYAEKGLWVEAET 500
Query: 304 XXXXXMNLF----DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
N+ DV+ YN +I Y + ++A + MKN G + TYN+L L
Sbjct: 501 VFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQML 560
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
+ + +A+ ++ M+ G P TY +I S+ + + + L++ M GV P++
Sbjct: 561 AGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNE 620
Query: 420 QTYKAVVSPLLQEGV 434
Y ++++ + G+
Sbjct: 621 VVYGSLINGFAESGM 635
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 165/379 (43%), Gaps = 6/379 (1%)
Query: 34 TFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRP-DSITYNCLIGGFCKMGKLTMAEKL 92
TFN +ID+ K G ++ A + S+M + S P D++T+N +I G L+ AE L
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEM----LKSGVPIDTVTFNTMIHTCGTHGHLSEAESL 362
Query: 93 KNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYV 152
+M EK I P+ +TY L+ ++ A +E A ++ K GL ++V + V+H L
Sbjct: 363 LKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQ 422
Query: 153 EGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFS 212
+ V +I+ M N I D+ + ++ + G V +A + + ++
Sbjct: 423 RKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTL 482
Query: 213 HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMM 272
++ Y + + + G D++ + +I + K E A+ +++ M
Sbjct: 483 AAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMK 542
Query: 273 KSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD-VITYNTLINGYCNSGKID 331
G P+ YNS+ L + TY +I Y G +
Sbjct: 543 NQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLS 602
Query: 332 EAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
+A AM+ G+ N Y +LIN + G +++A + ++M G ++I T LI
Sbjct: 603 DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 392 TSFSKKCSPEEVIKLHDYM 410
++SK EE +++D M
Sbjct: 663 KAYSKVGCLEEARRVYDKM 681
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 184/437 (42%), Gaps = 36/437 (8%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKH-GIWPNVVTFNMIIDVACKMGAMDLALKVVSKME-- 59
++ +L + +EA +YR ++ G++P+ VT ++ + C+ + V+++M+
Sbjct: 380 ILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRN 439
Query: 60 -----------VMSVYSIRPDSITYNCLIGGF---CKMGKLTMAEKL-----KNEMMEKD 100
+M +Y + L F C + T+A + K +E +
Sbjct: 440 SIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAE 499
Query: 101 IV-----------PNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
V +V Y +I Y +A+ E+A L M +G + YN++
Sbjct: 500 TVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQM 559
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
L ++ +++ M+D+ P TY+ + R G +++A + + + + +
Sbjct: 560 LAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPN 619
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
+ LIN S + A Q M G+ + + SLI + K G +E A +VY+
Sbjct: 620 EVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYD 679
Query: 270 KMMKSGEKPNLVLYNSVINGLCKE-EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG 328
KM S P++ NS+++ LC + DVI++ T++ Y G
Sbjct: 680 KMKDSEGGPDVAASNSMLS-LCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMG 738
Query: 329 KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ-GFVPDYITY 387
+DEA + M+ +G+ ++ ++N ++ G + + EL M+++ + D+ T+
Sbjct: 739 MLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTF 798
Query: 388 TILITSFSKKCSPEEVI 404
L T K P E +
Sbjct: 799 KTLFTLLKKGGVPSEAV 815
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 196/478 (41%), Gaps = 58/478 (12%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I K +L +A ++F LK G+ + VTFN +I G + A ++ KME
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATL--------- 111
I PD+ TYN L+ G + A + ++ + + P+ T+ +
Sbjct: 369 K---GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 112 -----------------IDGYS---------------RARSLEEAFRLCDEMMKKGLVMN 139
ID +S +A++L E F+L + + +
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQL--DCVLSSTTLA 483
Query: 140 SVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHS 199
+VI L+VE E V +M R D Y+++ K + +A
Sbjct: 484 AVIDVYAEKGLWVEA--ETVFYGKRNMSGQR--NDVLEYNVMIKAYGKAKLHEKALSLFK 539
Query: 200 KILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEG 259
+ D ++N L L + + A+++LA M G P T+ ++I + + G
Sbjct: 540 GMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLG 599
Query: 260 NVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVI 315
+ +AV +YE M K+G KPN V+Y S+ING + EE N I
Sbjct: 600 LLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNH---I 656
Query: 316 TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM 375
+LI Y G ++EA MK++ + A N++++ LG + +A+ + +
Sbjct: 657 VLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNAL 716
Query: 376 ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+G D I++ ++ + +E I++ + M G++ ++ V++ +G
Sbjct: 717 REKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADG 773
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 177/429 (41%), Gaps = 12/429 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+I A K +A+S+F G WP+ T+N + + + +D A +++++
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAE--- 575
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M +P TY +I + ++G L+ A L M + + PN Y +LI+G++ +
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPD-KFTYS 179
+EEA + M + G+ N ++ ++I G +E + M D+ PD + S
Sbjct: 636 VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNS 695
Query: 180 ILTKGLCRN-GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+L+ LC + G V+EA + + E D S ++ L A ++ M
Sbjct: 696 MLS--LCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNS--VINGLCKEEXX 296
GL+ D +F ++ + +G + +++ +M+ E+ L+ + + + L K+
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEMLV--ERKLLLDWGTFKTLFTLLKKGGV 810
Query: 297 XXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
+ T + G A + + I H YN +I
Sbjct: 811 PSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVI 870
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
G I A + M +G PD +T L+ + K E V ++H + +
Sbjct: 871 YTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELE 930
Query: 417 PHKQTYKAV 425
P + +KAV
Sbjct: 931 PSQSLFKAV 939
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 14/295 (4%)
Query: 137 VMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFK 196
V N + YN V+ L G + + L M N + P TY +L + G V EA
Sbjct: 142 VPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALL 201
Query: 197 FHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHC 256
+ + + D + ++ S A + + D+ + ID
Sbjct: 202 WIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDS----IDDFP 257
Query: 257 KEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVIT 316
K G+ ++ V + K S E + N + E+ L T
Sbjct: 258 KNGSAQSPVNL--KQFLSMELFKVGARNPI------EKSLHFASGSDSSPRKPRL--TST 307
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
+NTLI+ Y +G++++A M +G+ + T+NT+I+ GH+ +A+ L+K M
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 377 LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
+G PD TY IL++ + E ++ + + G+ P T++AV+ L Q
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQ 422
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 205/509 (40%), Gaps = 83/509 (16%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I K ++ EA F R L+ GI P VTFN +I + G + +V S M+
Sbjct: 302 NTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLG---EVTSLMKT 358
Query: 61 MSVY----------------------------------SIRPDSITYNCLIGGFCKMGKL 86
M ++ ++PD ++Y L+ F +
Sbjct: 359 MKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 87 TMAEKL------------------------KNEMMEKD--------IVPNVRT--YATLI 112
AE L + EM+EK + N+ + Y+ I
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANI 478
Query: 113 DGYSRARSLEEAFRL---CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDN 169
D Y L EA R+ C E+ K+ ++ YN +I + E L SM+
Sbjct: 479 DAYGERGYLSEAERVFICCQEVNKRTVIE----YNVMIKAYGISKSCEKACELFESMMSY 534
Query: 170 RIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGA 229
+ PDK TY+ L + L ++ + K+ E + D + +I+ + L+ A
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 230 KQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING 289
+++ M + PD+V +G LI+ GNV+ A+ E M ++G N V+YNS+I
Sbjct: 595 EEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKL 654
Query: 290 LCK----EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGI 345
K +E DV T N +IN Y + +A A +MK G
Sbjct: 655 YTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG- 713
Query: 346 AANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIK 405
AN T+ ++ K G ++A ++ K M + D ++Y ++ F+ +E ++
Sbjct: 714 EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVE 773
Query: 406 LHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
MV G+ P T+K++ + L++ G+
Sbjct: 774 TFKEMVSSGIQPDDSTFKSLGTILMKLGM 802
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 191/439 (43%), Gaps = 11/439 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ L K CK S++ ++ GI P T+ +IDV K G AL + KM
Sbjct: 191 NIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKM-- 248
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKL------KNEMMEKDIVPNVRTYATLIDG 114
S ++PD +T ++ + K + AE+ + + + TY T+ID
Sbjct: 249 -SKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDT 307
Query: 115 YSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPD 174
Y ++ ++EA M+++G+V +V +NT+IH G + V+ L+ +M PD
Sbjct: 308 YGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPD 366
Query: 175 KFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLA 234
TY+IL +N ++ A + ++ ++ L D S+ L+ + + A+ L+A
Sbjct: 367 TRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIA 426
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
M + D T +L + + +E + +++ +G + Y++ I+ +
Sbjct: 427 EMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEG-YSANIDAYGERG 485
Query: 295 XXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNT 354
+N VI YN +I Y S ++A +M + G+ + TYNT
Sbjct: 486 YLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNT 545
Query: 355 LINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKG 414
L+ L + + ++ M G+V D I Y +I+SF K +++ MV
Sbjct: 546 LVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYN 605
Query: 415 VIPHKQTYKAVVSPLLQEG 433
+ P Y +++ G
Sbjct: 606 IEPDVVVYGVLINAFADTG 624
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 145/329 (44%), Gaps = 44/329 (13%)
Query: 1 NVVI--YALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM 58
NV+I Y + K C+ +A +F + +G+ P+ T+N ++ + + + D+ K +
Sbjct: 509 NVMIKAYGISKSCE--KACELFESMMSYGVTPDKCTYNTLVQI---LASADMPHKGRCYL 563
Query: 59 EVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRA 118
E M D I Y +I F K+G+L MAE++ EM+E +I P+V Y LI+ ++
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW----------------------------- 149
++++A + M + G+ NSVIYN++I
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDV 683
Query: 150 --------LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
LY E M + I + R ++FT++++ +NG EA + ++
Sbjct: 684 YTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Query: 202 LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNV 261
E ++ D S+N ++ A + M G+ PD TF SL K G
Sbjct: 744 REMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMS 803
Query: 262 ENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
+ AV+ E++ K K L L+ S ++ L
Sbjct: 804 KKAVRKIEEIRKKEIKRGLELWISTLSSL 832
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 14/368 (3%)
Query: 71 ITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDE 130
I YN ++ K K + L +EM+ K I P TY TLID YS+ A +
Sbjct: 188 IHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGK 247
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSM------VDNRIPPDKFTYSILTKG 184
M K G+ + V V+ + + D+ + +TY+ +
Sbjct: 248 MSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDT 307
Query: 185 LCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD 244
++G + EA + ++LE ++ + N +I+ + L L+ +M + PD
Sbjct: 308 YGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPD 366
Query: 245 IVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXX 304
T+ LI H K ++E A +++M G KP+ V Y +++
Sbjct: 367 TRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIA 426
Query: 305 XXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHAT--YNTLINFLCK 361
N+ D T + L Y + +++++++ K +A N ++ Y+ I+ +
Sbjct: 427 EMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSW---FKRFHVAGNMSSEGYSANIDAYGE 483
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQT 421
G++ +A+ + + + I Y ++I ++ S E+ +L + M+ GV P K T
Sbjct: 484 RGYLSEAERVF-ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCT 542
Query: 422 YKAVVSPL 429
Y +V L
Sbjct: 543 YNTLVQIL 550
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 133/324 (41%), Gaps = 21/324 (6%)
Query: 71 ITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDE 130
I YN +I + A +L MM + P+ TY TL+ + A + ++
Sbjct: 506 IEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEK 565
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGN 190
M + G V + + Y VI G + + MV+ I PD Y +L GN
Sbjct: 566 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGN 625
Query: 191 VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGA----KQLLASMYVRGLVPDIV 246
V +A + + E + ++ +N LI + L A ++LL S + PD+
Sbjct: 626 VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN-KTQYPDVY 684
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPN------LVLYNSVINGLCKEEXXXXXX 300
T +I+ + + V A +++ M + GE L +Y NG +E
Sbjct: 685 TSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKK--NGRFEEATQIAKQ 742
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
L D ++YN+++ + G+ EA M ++GI + +T+ +L L
Sbjct: 743 MREMKI----LTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILM 798
Query: 361 KLGHIQQA----KELMKVMILQGF 380
KLG ++A +E+ K I +G
Sbjct: 799 KLGMSKKAVRKIEEIRKKEIKRGL 822
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 179/415 (43%), Gaps = 12/415 (2%)
Query: 25 KHGIWPNVVTFNMIIDV-ACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
K P+V+ FN++ID K + V +E V P TY LI +C
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV----PTEDTYALLIKAYCMA 203
Query: 84 GKLTMAEKLKNEMMEKDIVP---NVRTYATLIDGY-SRARSLEEAFRLCDEMMKKGLVMN 139
G + AE + EM + P V Y I+G R + EEA + M +
Sbjct: 204 GLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPT 263
Query: 140 SVIYNTVIHWLYVEGDMEGVSL-LISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFH 198
+ YN +I+ LY + +S L M ++ P+ TY+ L R G +A +
Sbjct: 264 TETYNLMIN-LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 199 SKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
++ E+ L D + +N L+ R+ GA ++ + M G PD ++ ++D + +
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 382
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITY 317
G +A V+E+M + G P + + +++ K + D
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 442
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
N+++N Y G+ + M+N A+ +TYN LIN K G +++ +EL +
Sbjct: 443 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 502
Query: 378 QGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
+ F PD +T+T I ++S+K + +++ + M+ G P T K ++S E
Sbjct: 503 KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSE 557
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 175/423 (41%), Gaps = 6/423 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I A ++ + EA S++ + L+ P T+ ++I C G ++ A V+ +M+
Sbjct: 159 NLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQN 218
Query: 61 MSVYSIRPDSITYNCLIGGFCKM-GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
V YN I G K G A + M P TY +I+ Y +A
Sbjct: 219 HHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKAS 278
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+++L EM N Y +++ EG E + + ++ + PD + Y+
Sbjct: 279 KSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYN 338
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L + R G A + S + D S+NI+++ R+ S A+ + M
Sbjct: 339 ALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL 398
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK-EEXXXX 298
G+ P + + L+ + K +V + ++M ++G +P+ + NS++N + +
Sbjct: 399 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM 458
Query: 299 XXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
D+ TYN LIN Y +G ++ +K + T+ + I
Sbjct: 459 EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 518
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIK----LHDYMVLKG 414
+ + E+ + MI G PD T +L+++ S + E+V +H + +
Sbjct: 519 YSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSS 578
Query: 415 VIP 417
++P
Sbjct: 579 LVP 581
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 107/268 (39%), Gaps = 38/268 (14%)
Query: 173 PDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQL 232
PD +++L + EA + ++LE+ + ++ +LI C + + A+ +
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 233 LASMYVRGLVPD---IVTFGSLIDGHCK-EGNVENAVQVYEKMMKSGEKPNLVLYNSVIN 288
L M + P + + + I+G K +GN E A+ V+++M + KP
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPT--------- 263
Query: 289 GLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAAN 348
TYN +IN Y + K ++ M++ N
Sbjct: 264 -------------------------TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPN 298
Query: 349 HATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHD 408
TY L+N + G ++A+E+ + + G PD Y L+ S+S+ P ++
Sbjct: 299 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 358
Query: 409 YMVLKGVIPHKQTYKAVVSPLLQEGVET 436
M G P + +Y +V + G+ +
Sbjct: 359 LMQHMGCEPDRASYNIMVDAYGRAGLHS 386
>AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:679487-681904 FORWARD
Length = 805
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 188/454 (41%), Gaps = 32/454 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I+ LC K +A+ V+ G P+ T+ ++I CK MD A+++ +M+
Sbjct: 293 NSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQY 352
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
PD+I YNCL+ G K K+T A +L +M+++ + + TY LIDG R
Sbjct: 353 NGFV---PDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGR 409
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
E F L ++ KKG ++++ ++ V L EG +EG L+ M D T S
Sbjct: 410 AEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISS 469
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G + G + K I E NL+ + N + + S K +G
Sbjct: 470 LLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQ-SKDKDYTPMFPSKG 528
Query: 241 LVPDIVTF-GSLIDGHCK------EGNVENAVQVYEKMMKSGEKP--------------- 278
DI++ GS DG E + ++ +++ +P
Sbjct: 529 SFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAK 588
Query: 279 ----NLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVI--TYNTLINGYCNSGKIDE 332
++ + N+ ++ + M + D+ TYN++++ + G
Sbjct: 589 PDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQT 648
Query: 333 AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
A M AA+ ATYN +I L K+G A ++ + QG D + Y LI
Sbjct: 649 ARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLIN 708
Query: 393 SFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
+ K +E +L D+M G+ P +Y ++
Sbjct: 709 ALGKATRLDEATQLFDHMKSNGINPDVVSYNTMI 742
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 7/275 (2%)
Query: 22 RSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-EVMSVY--SIRPDSITYNCLIG 78
+ K W ++N+ I G +D AL + +M E SVY S PD TYN LI
Sbjct: 242 KRFKFDTW----SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIH 297
Query: 79 GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVM 138
C GK A + +E+ P+ TY LI G ++ +++A R+ EM G V
Sbjct: 298 VLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVP 357
Query: 139 NSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFH 198
++++YN ++ + L MV + +TY+IL GL RNG F
Sbjct: 358 DTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLF 417
Query: 199 SKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
+ + DA + +I+ LCR L GA +L+ M RG D+VT SL+ G K+
Sbjct: 418 CDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQ 477
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
G + ++ + + + PN++ +N+ + K
Sbjct: 478 GRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKR 512
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 182/398 (45%), Gaps = 27/398 (6%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I L + + ++F K G + + +TF+++ C+ G ++ A+K+V +ME
Sbjct: 398 NILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMET 457
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNV-RTYATLIDGYSRAR 119
+S+ D +T + L+ GF K G+ EKL + E ++VPNV R A + R +
Sbjct: 458 RG-FSV--DLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQ 514
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLL-ISSMVDNRIPPDKFTY 178
S ++ + KG ++ ++ + E D G S +S M D D ++
Sbjct: 515 SKDKDY--TPMFPSKGSFLD------IMSMVGSEDD--GASAEEVSPMED-----DPWSS 559
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLC---RSNNLSGAKQLLAS 235
S L N + ++ D+F +++ +L +LS A +L
Sbjct: 560 SPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEI 619
Query: 236 MYVRGLVPDIV--TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK- 292
G V D+ T+ S++ K+G + A V ++M ++ ++ YN +I GL K
Sbjct: 620 FNGMG-VTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKM 678
Query: 293 EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
D++ YNTLIN + ++DEA MK+ GI + +Y
Sbjct: 679 GRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSY 738
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
NT+I K G +++A + +K M+ G +P+++T TIL
Sbjct: 739 NTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 139/339 (41%), Gaps = 43/339 (12%)
Query: 102 VPNVRTYATLIDGYSRARSLEEAFRLCDEMMK--KGLVMNSVIYNTVIHWLYVEGDMEGV 159
+P L+ G RA + F+ E +K K ++ YN IH GD++
Sbjct: 209 LPGTVAVNELLVGLRRA-DMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAA 267
Query: 160 SLLI------SSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
L SS+ + PD TY+ L LC G +A ++ + D ++
Sbjct: 268 LSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTY 327
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
ILI C+S + A ++ M G VPD + + L+DG K V A Q++EKM++
Sbjct: 328 RILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQ 387
Query: 274 SGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEA 333
G + C TYN LI+G +G+ +
Sbjct: 388 EG-----------VRASC-----------------------WTYNILIDGLFRNGRAEAG 413
Query: 334 FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
F +K G + T++ + LC+ G ++ A +L++ M +GF D +T + L+
Sbjct: 414 FTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIG 473
Query: 394 FSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
F K+ + KL ++ ++P+ + A V L+
Sbjct: 474 FHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKR 512
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 148/397 (37%), Gaps = 62/397 (15%)
Query: 64 YSIRP----DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
YS+RP + Y+ + C+ G L L M E + + L+D R+
Sbjct: 82 YSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSG 141
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME-GVSLLIS--SMVDNRIP---- 172
E A + D M + G +N +Y++V+ L + ++ +S+L DN
Sbjct: 142 KFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTG 201
Query: 173 --------PDKFTYSILTKGLCRNGNVNEAFK--FHSKILENNLIEDAFSHNILINYLCR 222
P + L GL R ++ FK F D +S+NI I+
Sbjct: 202 RVIIVSYLPGTVAVNELLVGL-RRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGC 260
Query: 223 SNNLSGAKQLLASMYVRGLV------PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE 276
+L A L M R V PDI T+ SLI C G ++A+ V++++ SG
Sbjct: 261 WGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGH 320
Query: 277 KPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAF 336
+P D TY LI G C S ++D+A
Sbjct: 321 EP----------------------------------DNSTYRILIQGCCKSYRMDDAMRI 346
Query: 337 SFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
M+ G + YN L++ K + +A +L + M+ +G TY ILI +
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 397 KCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
E L + KG T+ V L +EG
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREG 443
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 3/192 (1%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
+V N + + G + LA K+ M V + S TYN ++ F K G A
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLT--SYTYNSMMSSFVKKGYFQTAR 650
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
+ ++M E ++ TY +I G + + A + D + K+G ++ V+YNT+I+ L
Sbjct: 651 GVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINAL 710
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
++ + L M N I PD +Y+ + + + G + EA+K+ +L+ + +
Sbjct: 711 GKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNH 770
Query: 211 FSHNILINYLCR 222
+ IL +YL +
Sbjct: 771 VTDTIL-DYLGK 781
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Query: 138 MNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKF 197
+ S YN+++ +G + ++ M +N D TY+++ +GL + G + A
Sbjct: 628 LTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAV 687
Query: 198 HSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK 257
++ + D +N LIN L ++ L A QL M G+ PD+V++ ++I+ + K
Sbjct: 688 LDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSK 747
Query: 258 EGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
G ++ A + + M+ +G PN V +++++ L KE
Sbjct: 748 AGKLKEAYKYLKAMLDAGCLPNHVT-DTILDYLGKE 782
>AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3606490-3608409 FORWARD
Length = 602
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 144/296 (48%), Gaps = 14/296 (4%)
Query: 2 VVIYALCKECKLLEAMSVFYR---SLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM 58
V++ ALCKE + EA R ++ P+V FN++++ + + A K+ +M
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 59 EVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRA 118
+ M+V +P +TY LI G+C+M ++ +A ++ EM ++ N + +IDG A
Sbjct: 277 KAMNV---KPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEA 333
Query: 119 RSLEEAFRLCDEMMKKGLVMNS----VIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPD 174
L EA MM++ V S V YN+++ GD+ G S ++ M+ + P
Sbjct: 334 GRLSEAL----GMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPT 389
Query: 175 KFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLA 234
TY+ K ++ E + K++E D ++++++ LC LS A Q+
Sbjct: 390 TTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNK 449
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
M RG+ PD++T LI C+ +E A + ++ ++ G P + + + NGL
Sbjct: 450 EMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGL 505
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 181/448 (40%), Gaps = 70/448 (15%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+ V+ +LCK + A S+ + ++ N+V+ + I + + + + + E
Sbjct: 139 DSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEF 198
Query: 61 MSVYSIRPDSIT----YNCLIGGFCKMGKLTMA----EKLKNEMMEKDIVPNVRTYATLI 112
Y S T L+ CK G + A E++ M+ + VP+VR + L+
Sbjct: 199 ARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGG-TMDSNWVPSVRIFNILL 257
Query: 113 DGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW----------LYVEGDMEGVSLL 162
+G+ R+R L++A +L +EM + V Y T+I + V +M+ +
Sbjct: 258 NGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEME 317
Query: 163 ISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR 222
I+ MV N I GL G ++EA + ++N L+ C+
Sbjct: 318 INFMVFNPI----------IDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVL 282
+ +L GA ++L M RG+ P T+ K E + +Y K++++G P
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP---- 423
Query: 283 YNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKN 342
D +TY+ ++ C GK+ A + MKN
Sbjct: 424 ------------------------------DRLTYHLILKMLCEDGKLSLAMQVNKEMKN 453
Query: 343 AGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEE 402
GI + T LI+ LC+L +++A E + +G +P YIT+ ++ K +
Sbjct: 454 RGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDM 513
Query: 403 VIKLHDYMVLKGVIPHKQ----TYKAVV 426
+L M +PH + TY+ V
Sbjct: 514 AKRLSSLM---SSLPHSKKLPNTYREAV 538
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 51/300 (17%)
Query: 180 ILTKGLCRNGNVNEAFKFHSKI---LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
+L LC+ G+V EA + +I +++N + NIL+N RS L A++L M
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXX 296
+ P +VT+G+LI+G+C+ V+ A++V E+M + + N +++N +I+GL +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGE---- 332
Query: 297 XXXXXXXXXXXXMNLF-------DVITYNTLINGYCNSG--------------------- 328
M F ++TYN+L+ +C +G
Sbjct: 333 --AGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTT 390
Query: 329 --------------KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
K +E F + AG + + TY+ ++ LC+ G + A ++ K
Sbjct: 391 TTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKE 450
Query: 375 MILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
M +G PD +T T+LI + EE + D V +G+IP T+K + + L +G+
Sbjct: 451 MKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGM 510
>AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29071983-29073428 REVERSE
Length = 481
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 153/330 (46%), Gaps = 4/330 (1%)
Query: 104 NVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLI 163
+VR Y +I+ ++ R + + L + M KK + +N + V+ ++
Sbjct: 97 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAF 155
Query: 164 SSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRS 223
+ M +PP+ ++ L LC++ NV +A + + + D+ +++IL+ +
Sbjct: 156 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN-MRDRFTPDSKTYSILLEGWGKE 214
Query: 224 NNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLY 283
NL A+++ M G PDIVT+ ++D CK G V+ A+ + M S KP +Y
Sbjct: 215 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 274
Query: 284 NSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKN 342
+ +++ E + DV +N+LI +C + ++ + MK+
Sbjct: 275 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 334
Query: 343 AGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEE 402
G+ N + N ++ L + G +A ++ + MI + PD TYT++I F +K E
Sbjct: 335 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMET 393
Query: 403 VIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
K+ YM KGV P T+ +++ L +E
Sbjct: 394 ADKVWKYMRKKGVFPSMHTFSVLINGLCEE 423
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 171/366 (46%), Gaps = 6/366 (1%)
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
Y+ +I K+ + + L N M +K ++ NV T+ ++ Y+RA+ ++EA + M
Sbjct: 100 AYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVM 158
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
K L N V +N ++ L ++ + +M D R PD TYSIL +G + N+
Sbjct: 159 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNL 217
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
+A + ++++ D +++I+++ LC++ + A ++ SM P + L
Sbjct: 218 PKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 277
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
+ + E +E AV + +M +SG K ++ ++NS+I CK +
Sbjct: 278 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 337
Query: 312 F-DVITYNTLINGYCNSGKIDEAF-AFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
+ + N ++ G+ DEAF F +K A+ TY +I C+ ++ A
Sbjct: 338 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDAD--TYTMVIKMFCEKKEMETAD 395
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
++ K M +G P T+++LI ++ + ++ L + M+ G+ P T+ + L
Sbjct: 396 KVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLL 455
Query: 430 LQEGVE 435
++E E
Sbjct: 456 IKEERE 461
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 156/376 (41%), Gaps = 40/376 (10%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
NV TF +++ + +D A+ + VM Y + P+ + +N L+ CK + A+
Sbjct: 131 NVETFCIVMRKYARAQKVDEAIYAFN---VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQ 187
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
++ M ++ P+ +TY+ L++G+ + +L +A + EM+ G
Sbjct: 188 EVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAG--------------- 231
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
PD TYSI+ LC+ G V+EA + +
Sbjct: 232 --------------------CHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTT 271
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
F +++L++ N L A M G+ D+ F SLI CK ++N +V ++
Sbjct: 272 FIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKE 331
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKI 330
M G PN N ++ L + + D TY +I +C ++
Sbjct: 332 MKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEM 391
Query: 331 DEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
+ A M+ G+ + T++ LIN LC+ Q+A L++ MI G P +T+ L
Sbjct: 392 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 451
Query: 391 ITSFSKKCSPEEVIKL 406
K+ E+V+K
Sbjct: 452 RQLLIKE-EREDVLKF 466
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 142/295 (48%), Gaps = 7/295 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ ALCK + +A VF +++ P+ T++++++ K + A +V +M
Sbjct: 171 NGLLSALCKSKNVRKAQEVF-ENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMID 229
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ PD +TY+ ++ CK G++ A + M P Y+ L+ Y
Sbjct: 230 AGCH---PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENR 286
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
LEEA EM + G+ + ++N++I M+ V ++ M + P+ + +I
Sbjct: 287 LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNI 346
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIE-DAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ + L G +EAF K+++ + E DA ++ ++I C + A ++ M +
Sbjct: 347 ILRHLIERGEKDEAFDVFRKMIK--VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKK 404
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
G+ P + TF LI+G C+E + A + E+M++ G +P+ V + + L KEE
Sbjct: 405 GVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEE 459
>AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5117489-5119060 REVERSE
Length = 523
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 160/364 (43%), Gaps = 25/364 (6%)
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
S+ YN ++ KM + ++ +EM ++D N +TY L++ Y+ A ++EA + +
Sbjct: 143 SMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFE 202
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
+ G+ + V ++ ++ WL +E L S D +++ G C G
Sbjct: 203 RRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWCVLG 261
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
NV+EA +F I+ + D S+ +IN L + L A +L +M+ PD+
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM 309
++ID C + + A++V+ ++ + G PN+V YNS++ LCK
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK------------IRRTE 369
Query: 310 NLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGI-------AANHAT-----YNTLIN 357
+++++ L G C+ + ++ ++ ++ + A N YN +
Sbjct: 370 KVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFR 429
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
+ ++ +E+ M G PD TYTI I K E + M+ KG++P
Sbjct: 430 LYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Query: 418 HKQT 421
+T
Sbjct: 490 EPRT 493
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 120/274 (43%), Gaps = 9/274 (3%)
Query: 7 LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSI 66
LC+ K +E + S + ++ NMI++ C +G + A + + +
Sbjct: 223 LCR-YKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRF---WKDIIASKC 278
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
RPD ++Y +I K GKL A +L M + P+V+ +ID + + EA
Sbjct: 279 RPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALE 338
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSM--VDNRIPPDKFTYSILTKG 184
+ E+ +KG N V YN+++ L E V L+ M P+ T+S L K
Sbjct: 339 VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKY 398
Query: 185 LCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD 244
R+ +V+ + ++ +N + +N++ + + +++ + M GL PD
Sbjct: 399 SQRSKDVDIVLE---RMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPD 455
Query: 245 IVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKP 278
T+ I G +G + A+ +++MM G P
Sbjct: 456 QRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+I AL K+ KL +AM ++ P+V N +ID C + AL+V ++
Sbjct: 287 TMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREI--- 343
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEK--DIVPNVRTYATLIDGYSRAR 119
S P+ +TYN L+ CK+ + +L EM K PN T++ L+ R++
Sbjct: 344 SEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSK 403
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME-GVSLLISSMVDNRIPPDKFTY 178
++ + M K M S +YN + LYV+ D E V + S M + + PD+ TY
Sbjct: 404 DVDIVL---ERMAKNKCEMTSDLYNLMFR-LYVQWDKEEKVREIWSEMERSGLGPDQRTY 459
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNIL 216
+I GL G + EA + +++ ++ + + +L
Sbjct: 460 TIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 93/217 (42%)
Query: 213 HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMM 272
+N +++ L + Q+ M R + T+ L++ + V+ AV V+E+
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 273 KSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDE 332
+ G +LV ++ ++ LC+ + D+ N ++NG+C G + E
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHE 265
Query: 333 AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
A F + + + +Y T+IN L K G + +A EL + M PD +I
Sbjct: 266 AKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVID 325
Query: 393 SFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
+ K E +++ + KG P+ TY +++ L
Sbjct: 326 ALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHL 362
>AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20791817-20793250 REVERSE
Length = 477
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 132/291 (45%), Gaps = 13/291 (4%)
Query: 4 IYALCKE----CKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
I+A C E C+L++ M +K G TFN++I C G LA VV +
Sbjct: 161 IFAECGEYKAMCRLIDEM------IKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFI 211
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
++ RP +YN ++ + + + + + +M+E P+V TY ++ R
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+ +RL DEM+K G + YN ++H L L++ M + + P ++
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L GL R G + F + ++ D + ++I L A+++ M +
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEK 391
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
G +P++ T+ S+I G C G + A + ++M G PN V+Y++++N L
Sbjct: 392 GQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL 442
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 34/276 (12%)
Query: 143 YNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKIL 202
YN ++H L + + + M+++ PD TY+I+ R G + ++ +++
Sbjct: 225 YNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMV 284
Query: 203 ENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVE 262
++ D +++NIL+++L N A LL M G+ P ++ F +LIDG + G +E
Sbjct: 285 KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLE 344
Query: 263 NAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLIN 322
++ +K G P DV+ Y +I
Sbjct: 345 ACKYFMDETVKVGCTP----------------------------------DVVCYTVMIT 370
Query: 323 GYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
GY + G++++A M G N TYN++I C G ++A L+K M +G P
Sbjct: 371 GYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNP 430
Query: 383 DYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
+++ Y+ L+ + E ++ MV KG H
Sbjct: 431 NFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVH 466
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+V++A + K + +K G P++ T+N+++ + + L ++ +
Sbjct: 261 NIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH---HLATGNKPLAALNLLNH 317
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M + P I + LI G + GKL + +E ++ P+V Y +I GY
Sbjct: 318 MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 377
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
LE+A + EM +KG + N YN++I + G + L+ M P+ YS
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 181 LTKGLCRNGNVNEAFKFHSKILE 203
L L G V EA + ++E
Sbjct: 438 LVNNLKNAGKVLEAHEVVKDMVE 460
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 11/286 (3%)
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSIL-----TKGLCRNGNVNEAFKFHSKILENNLIE 208
G+ + + LI M+ + P T+++L GL R+ V E F SK N
Sbjct: 166 GEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARD--VVEQF-IKSKTF--NYRP 220
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
S+N +++ L + M G PD++T+ ++ + + G + ++
Sbjct: 221 YKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLL 280
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNS 327
++M+K G P+L YN +++ L + + VI + TLI+G +
Sbjct: 281 DEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRA 340
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
GK++ F G + Y +I G +++A+E+ K M +G +P+ TY
Sbjct: 341 GKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTY 400
Query: 388 TILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+I F +E L M +G P+ Y +V+ L G
Sbjct: 401 NSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAG 446
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 209/455 (45%), Gaps = 69/455 (15%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWP--NVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+I LCK K+ EA +F G+ P +VVT+ +I K+G M A ++ +++
Sbjct: 52 LIGELCKVGKIAEARKLF-----DGL-PERDVVTWTHVITGYIKLGDMREARELFDRVDS 105
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
R + +T+ ++ G+ + +L++AE L EM E+++V ++ T+IDGY+++
Sbjct: 106 ------RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----SWNTMIDGYAQSGR 155
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIP-PDKFTYS 179
+++A L DEM ++ N V +N+++ L G ++ L R+P D +++
Sbjct: 156 IDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFE-----RMPRRDVVSWT 206
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ GL +NG V+EA + + E N+I S N +I ++N + A QL M R
Sbjct: 207 AMVDGLAKNGKVDEARRLFDCMPERNII----SWNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 240 GLVP---------------------------DIVTFGSLIDGHCKEGNVENAVQVYEKMM 272
+++++ ++I G+ + E A+ V+ KM+
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 273 KSGE-KPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF--DVITYNTLINGYCNSGK 329
+ G KPN+ Y S+++ C + ++ + I + L+N Y SG+
Sbjct: 323 RDGSVKPNVGTYVSILSA-CSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGE 381
Query: 330 IDEAFAFSFAMKNAGIAANHA--TYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
+ A M + G+ ++N++I GH ++A E+ M GF P +TY
Sbjct: 382 LIAA----RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
Query: 388 TILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
L+ + S E+ ++ +V +P ++ +
Sbjct: 438 LNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEH 472
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 165/375 (44%), Gaps = 76/375 (20%)
Query: 60 VMSVYSI--RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR 117
V S+YS RP LIG CK+GK+ A KL + + E+D+V T+ +I GY +
Sbjct: 34 VRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVV----TWTHVITGYIK 89
Query: 118 ARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL-YVEGDMEGVSLLISSMVDNRIPPDK- 175
+ EA L D + + V+ W V G + L I+ M+ +P
Sbjct: 90 LGDMREARELFDRVDSR---------KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV 140
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS 235
+++ + G ++G +++A + ++ E N++ S N ++ L + + A L
Sbjct: 141 VSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFER 196
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
M R D+V++ +++DG K G V+ A ++++ C E
Sbjct: 197 MPRR----DVVSWTAMVDGLAKNGKVDEARRLFD---------------------CMPER 231
Query: 296 XXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTL 355
++I++N +I GY + +IDEA M + A++NT+
Sbjct: 232 -----------------NIISWNAMITGYAQNNRIDEADQLFQVMPE----RDFASWNTM 270
Query: 356 INFLCKLGHIQQAKELMKVMILQGFVPD--YITYTILITSFSKKCSPEEVIKLHDYMVLK 413
I G I+ +E+ K L +P+ I++T +IT + + EE + + M+
Sbjct: 271 IT-----GFIRN-REMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRD 324
Query: 414 G-VIPHKQTYKAVVS 427
G V P+ TY +++S
Sbjct: 325 GSVKPNVGTYVSILS 339
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 142/287 (49%), Gaps = 28/287 (9%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ AL + ++ EAM++F R + +VV++ ++D K G +D A ++ M
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPE 230
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
++ I++N +I G+ + ++ A++L M E+D ++ T+I G+ R R
Sbjct: 231 RNI-------ISWNAMITGYAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNRE 279
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG--DMEGVSLLISSMVDNRIPPDKFTY 178
+ +A L D M +K N + + T+I YVE + E +++ + D + P+ TY
Sbjct: 280 MNKACGLFDRMPEK----NVISWTTMIT-GYVENKENEEALNVFSKMLRDGSVKPNVGTY 334
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ + E + H I ++ ++ + L+N +S L A++ M+
Sbjct: 335 VSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARK----MFD 390
Query: 239 RGLV--PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLY 283
GLV D++++ S+I + G+ + A+++Y +M K G KP+ V Y
Sbjct: 391 NGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
>AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26805651-26807183 REVERSE
Length = 510
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 157/363 (43%), Gaps = 44/363 (12%)
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
YN LI K+ + + L ++M K ++ T+A + Y+RAR ++EA +M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSK-ETFALISRRYARARKVKEAIGAFHKME 189
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
+ G M S +N ++ L ++ + M R PD +Y+IL +G + N+
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
+ + ++ + D ++ I+IN C++ A + M R P F SLI
Sbjct: 250 RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLI 309
Query: 253 DGHCKEGNVENAVQVYEKMMKSG---EKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM 309
+G E + +A++ +E+ SG E P
Sbjct: 310 NGLGSEKKLNDALEFFERSKSSGFPLEAP------------------------------- 338
Query: 310 NLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
TYN L+ YC S ++++A+ M+ G+ N TY+ +++ L ++ ++A
Sbjct: 339 ------TYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAY 392
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
E+ + M + P TY I++ F K + IK+ D M KGV+P + ++++ L
Sbjct: 393 EVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITAL 449
Query: 430 LQE 432
E
Sbjct: 450 CHE 452
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 137/289 (47%), Gaps = 8/289 (2%)
Query: 5 YALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVY 64
YA ++ K EA+ F++ + G FN ++D K + A KV KM+
Sbjct: 172 YARARKVK--EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKR-- 227
Query: 65 SIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEA 124
PD +Y L+ G+ + L +++ EM ++ P+V Y +I+ + +A+ EEA
Sbjct: 228 -FEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
Query: 125 FRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKG 184
R +EM ++ + I+ ++I+ L E + + P + TY+ L
Sbjct: 287 IRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 185 LCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD 244
C + + +A+K ++ + +A +++I++++L R A ++ +M P
Sbjct: 347 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PT 403
Query: 245 IVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
+ T+ ++ C + ++ A++++++M G P + +++S+I LC E
Sbjct: 404 VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHE 452
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 106/270 (39%), Gaps = 6/270 (2%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+++ +E LL V G P+VV + +II+ CK + A++ ++ME
Sbjct: 237 ILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQR 296
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
+ +P + LI G KL A + TY L+ Y ++ +
Sbjct: 297 NC---KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRM 353
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
E+A++ DEM KG+ N+ Y+ ++H L + + +M P TY I+
Sbjct: 354 EDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIM 410
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
+ C ++ A K ++ ++ + LI LC N L A + M G+
Sbjct: 411 VRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
P F L EG + + KM
Sbjct: 471 RPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 160/371 (43%), Gaps = 4/371 (1%)
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
+P+ Y +I + G L ++ +EM + + +V +Y LI+ Y R E +
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEG-DMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
L D M + + + + YNTVI+ G D EG+ L + M I PD TY+ L
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
G +EA + + ++ D +++ L+ + L LL M G +PDI
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXX 305
++ L++ + K G+++ A+ V+ +M +G PN Y+ ++N +
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 306 XXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGH 364
N D TYN LI + G E M I + TY +I F C G
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII-FACGKGG 436
Query: 365 IQQ-AKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYK 423
+ + A+++++ M VP YT +I +F + EE + + M G P +T+
Sbjct: 437 LHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFH 496
Query: 424 AVVSPLLQEGV 434
+++ + G+
Sbjct: 497 SLLYSFARGGL 507
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 176/418 (42%), Gaps = 15/418 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKH-GIWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
N VI A + E + + ++H GI P++VT+N ++ G D A V
Sbjct: 215 NTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV---FR 271
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
M+ I PD TY+ L+ F K+ +L L EM +P++ +Y L++ Y+++
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSG 331
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
S++EA + +M G N+ Y+ +++ G + V L M + PD TY+
Sbjct: 332 SIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYN 391
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNL-SGAKQLLASMYV 238
IL + G E ++E N+ D ++ +I + C L A+++L M
Sbjct: 392 ILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII-FACGKGGLHEDARKILQYMTA 450
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNL-----VLYNSVINGLCKE 293
+VP + +I+ + E A+ + M + G P++ +LY+ GL KE
Sbjct: 451 NDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKE 510
Query: 294 EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYN 353
+ T+N I Y GK +EA M+ + + T
Sbjct: 511 SEAILSRLVDSGIPR----NRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLE 566
Query: 354 TLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV 411
+++ + + +E + M +P + Y +++ + K ++V +L + M+
Sbjct: 567 AVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 624
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 174/417 (41%), Gaps = 3/417 (0%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+I A + + ++ + R I P+++T+N +I+ AC G +D ++ M
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVIN-ACARGGLDWE-GLLGLFAEM 238
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
I+PD +TYN L+ G AE + M + IVP++ TY+ L++ + + R L
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
E+ L EM G + + YN ++ G ++ + M P+ TYS+L
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
++G ++ + ++ +N DA ++NILI L M +
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
PD+ T+ +I K G E+A ++ + M + P+ Y VI +
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 302 XXXXXXXMNLFDVI-TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
+ I T+++L+ + G + E+ A + ++GI N T+N I
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
+ G ++A + M PD T +++ +S +E + + M ++P
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILP 595
>AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675575 FORWARD
Length = 349
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 35/246 (14%)
Query: 153 EGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFS 212
+ + V +++ MV+N + PD+ T I + LC G V+EA ++ E + D ++
Sbjct: 137 DSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYT 196
Query: 213 HNILINYLCRSNNLSGAKQLLASMYVR-GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
+N L+ +LC+ +L + + M + PD+V+F LID C N+ A+ + K+
Sbjct: 197 YNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKL 256
Query: 272 MKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKID 331
+G KP D YNT++ G+C K
Sbjct: 257 GNAGFKP----------------------------------DCFLYNTIMKGFCTLSKGS 282
Query: 332 EAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
EA MK G+ + TYNTLI L K G +++A+ +K M+ G+ PD TYT L+
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 392 TSFSKK 397
+K
Sbjct: 343 NGMCRK 348
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 37/265 (13%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSK-MEVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
P TF +++ AC+ A D ++ V + + +M + PD +T + + C+ G++
Sbjct: 120 PGRSTFLILLSHACR--APDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A+ L E+ EK P+ TY L+ + + L + DEM
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD--------------- 222
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
D + PD +++IL +C + N+ EA SK+
Sbjct: 223 -------------------DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D F +N ++ C + S A + M G+ PD +T+ +LI G K G VE A
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKE 293
+ M+ +G +P+ Y S++NG+C++
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRK 348
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 8/284 (2%)
Query: 157 EGVSLLISSMVDNRIPPD-KFTYSILTKGLCRNGNVNEAFKFHSKILEN--NLIEDAFSH 213
+ SL S +RIP D KF S+L + VN+ K IL++ N +
Sbjct: 67 DAKSLFNSIAATSRIPLDLKFHNSVL-QSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTF 125
Query: 214 NILINYLCRS--NNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
IL+++ CR+ +++S ++L M GL PD VT + C+ G V+ A + +++
Sbjct: 126 LILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKEL 185
Query: 272 MKSGEKPNLVLYNSVINGLCK-EEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGK 329
+ P+ YN ++ LCK ++ ++ D++++ LI+ CNS
Sbjct: 186 TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 330 IDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
+ EA + NAG + YNT++ C L +A + K M +G PD ITY
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 390 LITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
LI SK EE MV G P TY ++++ + ++G
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++ + +LC+ ++ EA + + P+ T+N ++ CK + + + V +M
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMR- 221
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ ++PD +++ LI C L A L +++ P+ Y T++ G+
Sbjct: 222 -DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
EA + +M ++G+ + + YNT+I L G +E + + +MVD PD TY+
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 181 LTKGLCRNG 189
L G+CR G
Sbjct: 341 LMNGMCRKG 349
>AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2399117-2400496 REVERSE
Length = 459
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 158/368 (42%), Gaps = 34/368 (9%)
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
R D +Y+ LI K +++ + +++ + LI Y +A S+++A
Sbjct: 77 FRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAI 136
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
+ ++ V NT+I+ L G++E D R+ P+ +++IL KG
Sbjct: 137 DVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGF 196
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
+ A K ++LE + ++N LI +LCR++++ AK LL M + + P+
Sbjct: 197 LDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNA 256
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXX 305
VTFG L+ G C +G A ++ M G KP LV Y +++ L K
Sbjct: 257 VTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKR------------ 304
Query: 306 XXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
G+IDEA MK I + YN L+N LC +
Sbjct: 305 ----------------------GRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRV 342
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
+A ++ M ++G P+ TY ++I F + + + + + M+ P T+ +
Sbjct: 343 PEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCM 402
Query: 426 VSPLLQEG 433
V+ L++ G
Sbjct: 403 VAGLIKGG 410
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 135/278 (48%), Gaps = 3/278 (1%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
+A+ VF++ + + N +I+V G ++ A + M +RP+S+++N
Sbjct: 134 KAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR---LRPNSVSFN 190
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
LI GF A K+ +EM+E ++ P+V TY +LI R + +A L ++M+KK
Sbjct: 191 ILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK 250
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
+ N+V + ++ L +G+ L+ M P Y IL L + G ++EA
Sbjct: 251 RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA 310
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
++ + + D +NIL+N+LC + A ++L M ++G P+ T+ +IDG
Sbjct: 311 KLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDG 370
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
C+ + ++ + V M+ S P + ++ GL K
Sbjct: 371 FCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIK 408
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 3/291 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I L +L +A S F + + PN V+FN++I + A KV +M
Sbjct: 155 NTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLE 214
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M V +P +TYN LIG C+ + A+ L +M++K I PN T+ L+ G
Sbjct: 215 MEV---QPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGE 271
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
EA +L +M +G V Y ++ L G ++ LL+ M RI PD Y+I
Sbjct: 272 YNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNI 331
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L LC V EA++ +++ +A ++ ++I+ CR + +L +M
Sbjct: 332 LVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASR 391
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC 291
P TF ++ G K GN+++A V E M K + ++++ LC
Sbjct: 392 HCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 138/307 (44%), Gaps = 1/307 (0%)
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
EEA L + + G + Y+++I+ L + + V ++ + + + + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
+ + G+V++A KI + + S N LIN L + L AK L
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
P+ V+F LI G + + E A +V+++M++ +P++V YNS+I LC+ +
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 302 XXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
+ + +T+ L+ G C G+ +EA F M+ G Y L++ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
K G I +AK L+ M + PD + Y IL+ +C E ++ M +KG P+
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 421 TYKAVVS 427
TY+ ++
Sbjct: 363 TYRMMID 369
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 167/369 (45%), Gaps = 18/369 (4%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
EA+S+F++ + G + +++ +I K D ++ + ++ ++R +
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQI---LRLVRYRNVRCRESLFM 120
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
LI + K G + A + +++ D V +++ TLI+ LE+A D
Sbjct: 121 GLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
L NSV +N +I + D E + M++ + P TY+ L LCRN ++ +A
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
+++ + +A + +L+ LC + AK+L+ M RG P +V +G L+
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE----EXXXXXXXXXXXXXXMN 310
K G ++ A + +M K KP++V+YN ++N LC E E N
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Query: 311 LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH----ATYNTLINFLCKLGHIQ 366
TY +I+G+C E F + NA +A+ H AT+ ++ L K G++
Sbjct: 361 ---AATYRMMIDGFCRI----EDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLD 413
Query: 367 QAKELMKVM 375
A +++VM
Sbjct: 414 HACFVLEVM 422
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 1/242 (0%)
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
EA + E D S++ LI L +S N Q+L + R + F LI
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF 312
+ K G+V+ A+ V+ K+ + N++IN L M L
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 313 -DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
+ +++N LI G+ + + A M + + TYN+LI FLC+ + +AK L
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 372 MKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
++ MI + P+ +T+ +L+ K E KL M +G P Y ++S L +
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 432 EG 433
G
Sbjct: 304 RG 305
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+++ L K ++ EA + K I P+VV +N++++ C + A +V+++M++
Sbjct: 296 ILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 355
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
+P++ TY +I GFC++ + N M+ P T+ ++ G + +L
Sbjct: 356 GC---KPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNL 412
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
+ A + + M KK L S + ++ L ++
Sbjct: 413 DHACFVLEVMGKKNLSFGSGAWQNLLSDLCIK 444
>AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22180231-22181652 REVERSE
Length = 473
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 132/289 (45%), Gaps = 5/289 (1%)
Query: 4 IYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSV 63
I+A C E K + + ++ G TFN++I C G LA + V +
Sbjct: 158 IFAECGEYKAM--WRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAVVQFMKSKT 212
Query: 64 YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEE 123
++ RP +YN ++ + + + E + +M+E P+V TY L+ R ++
Sbjct: 213 FNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDR 272
Query: 124 AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
RL DEM + G +S YN ++H L ++ M + I P Y+ L
Sbjct: 273 FDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLID 332
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
GL R GN+ F ++++ D + ++I S L AK++ M V+G +P
Sbjct: 333 GLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP 392
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
++ T+ S+I G C G A + ++M G PN V+Y+++++ L K
Sbjct: 393 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRK 441
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 153/323 (47%), Gaps = 9/323 (2%)
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
+Y+ L+ F + G+ +L +EM++ RT+ LI A ++A + M
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQA--VVQFM 208
Query: 132 MKKGLVMNSV--IYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
K YN +++ L + + + M+++ PD TY+IL R G
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLG 268
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
++ + ++ + D++++NIL++ L + N A L M G+ P ++ +
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING-LCKEEXXXXXXXXXXXXXX 308
+LIDG + GN+E ++M+K+G +P++V Y +I G + E
Sbjct: 329 TLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK 388
Query: 309 MNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
L +V TYN++I G C +G+ EA M++ G N Y+TL+++L K G + +A
Sbjct: 389 GQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEA 448
Query: 369 KELMKVMILQG----FVPDYITY 387
+++++ M+ +G VP + Y
Sbjct: 449 RKVIREMVKKGHYVHLVPKMMKY 471
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 124/270 (45%), Gaps = 10/270 (3%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
+ +++ + YR KH ++N I++ + L ++ V K + +S PD +
Sbjct: 206 QFMKSKTFNYRPFKH-------SYNAILNSLLGVKQYKL-IEWVYKQMLEDGFS--PDVL 255
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
TYN L+ ++GK+ ++L +EM P+ TY L+ + A + M
Sbjct: 256 TYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHM 315
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
+ G+ + + Y T+I L G++E + MV PD Y+++ G +G +
Sbjct: 316 KEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGEL 375
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
++A + ++ + + F++N +I LC + A LL M RG P+ V + +L
Sbjct: 376 DKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTL 435
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLV 281
+ K G + A +V +M+K G +LV
Sbjct: 436 VSYLRKAGKLSEARKVIREMVKKGHYVHLV 465
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++++ L K K L A++ + GI P+V+ + +ID + G ++ A K ++
Sbjct: 293 NILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE-ACKYF--LDE 349
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M RPD + Y +I G+ G+L A+++ EM K +PNV TY ++I G A
Sbjct: 350 MVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 409
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMV 167
EA L EM +G N V+Y+T++ +L G + +I MV
Sbjct: 410 FREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMV 456
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 116/281 (41%), Gaps = 1/281 (0%)
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
G+ + + L+ MV + P T+++L G +A K N S+
Sbjct: 163 GEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSY 222
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
N ++N L + + M G PD++T+ L+ + + G ++ +++++M +
Sbjct: 223 NAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMAR 282
Query: 274 SGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDE 332
G P+ YN +++ L K + + V+ Y TLI+G +G ++
Sbjct: 283 DGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEA 342
Query: 333 AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
F M AG + Y +I G + +AKE+ + M ++G +P+ TY +I
Sbjct: 343 CKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 402
Query: 393 SFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
E L M +G P+ Y +VS L + G
Sbjct: 403 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAG 443
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 3/196 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++++ + K+ +F + G P+ T+N+++ + +G + L ++ +
Sbjct: 258 NILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHI---LGKGNKPLAALTTLNH 314
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M I P + Y LI G + G L + +EM++ P+V Y +I GY +
Sbjct: 315 MKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGE 374
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L++A + EM KG + N YN++I L + G+ L+ M P+ YS
Sbjct: 375 LDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYST 434
Query: 181 LTKGLCRNGNVNEAFK 196
L L + G ++EA K
Sbjct: 435 LVSYLRKAGKLSEARK 450
>AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21824233 REVERSE
Length = 583
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 48/298 (16%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSL---KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSK 57
+++ + K EA VF L K + P+ ++M+I + K G + A KV S
Sbjct: 213 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 272
Query: 58 MEVMSVYSIRPDS-ITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYS 116
M V P S +TYN L+ +++ K+ ++M DI P+V +YA LI Y
Sbjct: 273 MVGKGV----PQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYG 325
Query: 117 RARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKF 176
RAR EEA + +EM+ G+ YN ++ + G +E + SM +RI PD +
Sbjct: 326 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 385
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
+Y+ +++ ++++ GA++ +
Sbjct: 386 SYT-----------------------------------TMLSAYVNASDMEGAEKFFKRI 410
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN--GLCK 292
V G P+IVT+G+LI G+ K +VE ++VYEKM SG K N + ++++ G CK
Sbjct: 411 KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK 468
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 165/356 (46%), Gaps = 20/356 (5%)
Query: 25 KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMG 84
K G PNV+++ +++ + G + A + +M+ P +ITY ++ F +
Sbjct: 167 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGP---EPSAITYQIILKTFVEGD 223
Query: 85 KLTMAEKLKNEMMEKD---IVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSV 141
K AE++ ++++ + P+ + Y +I Y +A + E+A ++ M+ KG+ ++V
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 142 IYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
YN+++ + E + VS + M + I PD +Y++L K R EA ++
Sbjct: 284 TYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 340
Query: 202 LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNV 261
L+ + ++NIL++ S + AK + SM + PD+ ++ +++ + ++
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 262 ENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLI 321
E A + ++++ G +PN+V Y ++I G K M L + T++
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK---ANDVEKMMEVYEKMRLSGIKANQTIL 457
Query: 322 ------NGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
+G C + A + M++ G+ + N L++ +++AKEL
Sbjct: 458 TTIMDASGRCKN--FGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 150/333 (45%), Gaps = 10/333 (3%)
Query: 71 ITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDE 130
I + LI + K+G AE++ + + + PNV +Y L++ Y R A +
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGD-MEGVSLLISSMVDNR---IPPDKFTYSILTKGLC 186
M G +++ Y ++ +VEGD + + +++D + + PD+ Y ++
Sbjct: 200 MQSSGPEPSAITYQIILK-TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 258
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
+ GN +A K S ++ + + ++N L+++ +S ++ M + PD+V
Sbjct: 259 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVV 315
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXX 306
++ LI + + E A+ V+E+M+ +G +P YN +++
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 307 XXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
+F D+ +Y T+++ Y N+ ++ A F +K G N TY TLI K +
Sbjct: 376 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 435
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKC 398
++ E+ + M L G + T ++ + S +C
Sbjct: 436 EKMMEVYEKMRLSGIKANQTILTTIMDA-SGRC 467
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 116/276 (42%), Gaps = 5/276 (1%)
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
G+ G ++S + P+ +Y+ L + R G N A ++ + A ++
Sbjct: 153 GNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITY 212
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRG---LVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
I++ + A+++ ++ L PD + +I + K GN E A +V+
Sbjct: 213 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 272
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKI 330
M+ G + V YNS+++ + DV++Y LI Y + +
Sbjct: 273 MVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQP--DVVSYALLIKAYGRARRE 330
Query: 331 DEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
+EA + M +AG+ H YN L++ G ++QAK + K M PD +YT +
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 391 ITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
++++ E K + + G P+ TY ++
Sbjct: 391 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 426
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 100/212 (47%), Gaps = 7/212 (3%)
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
+LI + N +GA+++L+ + G P+++++ +L++ + + G NA ++ +M S
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 275 GEKPNLVLYN----SVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKI 330
G +P+ + Y + + G +E D Y+ +I Y +G
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 331 DEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
++A +M G+ + TYN+L++F + + + M+ +Q PD ++Y +L
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ---PDVVSYALL 320
Query: 391 ITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
I ++ + EE + + + M+ GV P + Y
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAY 352
>AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21823919 REVERSE
Length = 590
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 48/298 (16%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSL---KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSK 57
+++ + K EA VF L K + P+ ++M+I + K G + A KV S
Sbjct: 220 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 279
Query: 58 MEVMSVYSIRPDS-ITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYS 116
M V P S +TYN L+ +++ K+ ++M DI P+V +YA LI Y
Sbjct: 280 MVGKGV----PQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYG 332
Query: 117 RARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKF 176
RAR EEA + +EM+ G+ YN ++ + G +E + SM +RI PD +
Sbjct: 333 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 392
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
+Y+ +++ ++++ GA++ +
Sbjct: 393 SYT-----------------------------------TMLSAYVNASDMEGAEKFFKRI 417
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN--GLCK 292
V G P+IVT+G+LI G+ K +VE ++VYEKM SG K N + ++++ G CK
Sbjct: 418 KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK 475
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 165/356 (46%), Gaps = 20/356 (5%)
Query: 25 KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMG 84
K G PNV+++ +++ + G + A + +M+ P +ITY ++ F +
Sbjct: 174 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGP---EPSAITYQIILKTFVEGD 230
Query: 85 KLTMAEKLKNEMMEKD---IVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSV 141
K AE++ ++++ + P+ + Y +I Y +A + E+A ++ M+ KG+ ++V
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 142 IYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
YN+++ + E + VS + M + I PD +Y++L K R EA ++
Sbjct: 291 TYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 347
Query: 202 LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNV 261
L+ + ++NIL++ S + AK + SM + PD+ ++ +++ + ++
Sbjct: 348 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 407
Query: 262 ENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLI 321
E A + ++++ G +PN+V Y ++I G K M L + T++
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK---ANDVEKMMEVYEKMRLSGIKANQTIL 464
Query: 322 ------NGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
+G C + A + M++ G+ + N L++ +++AKEL
Sbjct: 465 TTIMDASGRCKN--FGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 150/333 (45%), Gaps = 10/333 (3%)
Query: 71 ITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDE 130
I + LI + K+G AE++ + + + PNV +Y L++ Y R A +
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGD-MEGVSLLISSMVDNR---IPPDKFTYSILTKGLC 186
M G +++ Y ++ +VEGD + + +++D + + PD+ Y ++
Sbjct: 207 MQSSGPEPSAITYQIILK-TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 265
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
+ GN +A K S ++ + + ++N L+++ +S ++ M + PD+V
Sbjct: 266 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVV 322
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXX 306
++ LI + + E A+ V+E+M+ +G +P YN +++
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Query: 307 XXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
+F D+ +Y T+++ Y N+ ++ A F +K G N TY TLI K +
Sbjct: 383 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 442
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKC 398
++ E+ + M L G + T ++ + S +C
Sbjct: 443 EKMMEVYEKMRLSGIKANQTILTTIMDA-SGRC 474
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 116/276 (42%), Gaps = 5/276 (1%)
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
G+ G ++S + P+ +Y+ L + R G N A ++ + A ++
Sbjct: 160 GNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITY 219
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRG---LVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
I++ + A+++ ++ L PD + +I + K GN E A +V+
Sbjct: 220 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 279
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKI 330
M+ G + V YNS+++ + DV++Y LI Y + +
Sbjct: 280 MVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQP--DVVSYALLIKAYGRARRE 337
Query: 331 DEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
+EA + M +AG+ H YN L++ G ++QAK + K M PD +YT +
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 391 ITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
++++ E K + + G P+ TY ++
Sbjct: 398 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 433
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 100/212 (47%), Gaps = 7/212 (3%)
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
+LI + N +GA+++L+ + G P+++++ +L++ + + G NA ++ +M S
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 275 GEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKI 330
G +P+ + Y ++ + +E D Y+ +I Y +G
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 331 DEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
++A +M G+ + TYN+L++F + + + M+ +Q PD ++Y +L
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ---PDVVSYALL 327
Query: 391 ITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
I ++ + EE + + + M+ GV P + Y
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAY 359
>AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23106600-23108399 REVERSE
Length = 599
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 132/274 (48%), Gaps = 3/274 (1%)
Query: 11 CKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDS 70
KL + V + LK PN++T+ ++++ C++ + A ++ + M ++PD
Sbjct: 277 AKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM---IDQGLKPDI 333
Query: 71 ITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDE 130
+ +N ++ G + K + A KL + M K PNVR+Y +I + + S+E A D+
Sbjct: 334 VAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDD 393
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGN 190
M+ GL ++ +Y +I + ++ V L+ M + PPD TY+ L K +
Sbjct: 394 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKM 453
Query: 191 VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGS 250
A + ++K+++N + + N+++ + N + + M +G+ PD ++
Sbjct: 454 PEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTV 513
Query: 251 LIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYN 284
LI G EG A + E+M+ G K L+ YN
Sbjct: 514 LIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 153/365 (41%), Gaps = 36/365 (9%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
DS TYN ++ K + + EM K ++ + T+ + ++ A+ ++A +
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIF 252
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
+ M K + N ++ L + +L + + R P+ TY++L G CR
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRV 311
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
N+ EA + + +++ L D +HN+++ L RS S A +L M +G P++ ++
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
+I CK+ ++E A++ ++ M+ SG +P
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQP------------------------------ 401
Query: 309 MNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
D Y LI G+ K+D + M+ G + TYN LI + + A
Sbjct: 402 ----DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHA 457
Query: 369 KELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSP 428
+ MI P T+ +++ S+ + E + + M+ KG+ P +Y ++
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG 517
Query: 429 LLQEG 433
L+ EG
Sbjct: 518 LIGEG 522
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 143/352 (40%), Gaps = 41/352 (11%)
Query: 53 KVVSKMEVMSVYSIRPDSITYNCLIG--GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYAT 110
K V E+M Y + T NCL+ G K+GK A+ L +++ E+ PN+ TY
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGK--EAQVLFDKLKER-FTPNMMTYTV 303
Query: 111 LIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNR 170
L++G+ R R+L EA R+ W + M+D
Sbjct: 304 LLNGWCRVRNLIEAARI---------------------W--------------NDMIDQG 328
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
+ PD ++++ +GL R+ ++A K + + S+ I+I C+ +++ A
Sbjct: 329 LKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 388
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
+ M GL PD + LI G + ++ ++ ++M + G P+ YN++I +
Sbjct: 389 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLM 448
Query: 291 CKEEXXXXXXXXXXXXXXMNLFDVI-TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
++ + I T+N ++ Y + + A M GI +
Sbjct: 449 ANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDD 508
Query: 350 ATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
+Y LI L G ++A ++ M+ +G I Y F + PE
Sbjct: 509 NSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE 560
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 3/206 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV++ L + K +A+ +F+ G PNV ++ ++I CK +M+ A++ M V
Sbjct: 337 NVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM-V 395
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S ++PD+ Y CLI GF KL +L EM EK P+ +TY LI + +
Sbjct: 396 DS--GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKM 453
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
E A R+ ++M++ + + +N ++ ++ + E + M+ I PD +Y++
Sbjct: 454 PEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTV 513
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNL 206
L +GL G EA ++ ++L+ +
Sbjct: 514 LIRGLIGEGKSREACRYLEEMLDKGM 539
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 2/235 (0%)
Query: 194 AFKFHSKILENN-LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
AF+F E D+ ++N +++ L ++ +L M +GL+ + TF +
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAM 236
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF 312
+ AV ++E M K K + N +++ L + +
Sbjct: 237 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP 296
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
+++TY L+NG+C + EA M + G+ + +N ++ L + A +L
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 356
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
VM +G P+ +YTI+I F K+ S E I+ D MV G+ P Y +++
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
>AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26339876-26341789 REVERSE
Length = 637
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 174/404 (43%), Gaps = 5/404 (1%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
P ++ + + + + + D+ K + ++ M + PD + CL+ CK G + A
Sbjct: 178 PQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDA 237
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
KL +M + V N+R + +L+ G+ R + EA + +M + G + V Y ++
Sbjct: 238 AKLFEDMRMRFPV-NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSG 296
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
G M L+ M P+ Y++L + LC+ + EA K ++ D
Sbjct: 297 YANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEAD 356
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
++ L++ C+ + +L M +GL+P +T+ ++ H K+ + E +++ E
Sbjct: 357 VVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELME 416
Query: 270 KMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD-VITYNTLINGYCNSG 328
KM + P++ +YN VI CK L V T+ +ING + G
Sbjct: 417 KMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Query: 329 KIDEAFAFSFAMKNAGI--AANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP-DYI 385
+ EA M G+ + + T L+N + K ++ AK++ + +G + +
Sbjct: 477 CLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVL 536
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
++TI I + K +E M+ +P T+ ++ L
Sbjct: 537 SWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGL 580
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 146/332 (43%), Gaps = 3/332 (0%)
Query: 104 NVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSL-L 162
++ Y +++ S+ R + L +EM K+ + V+ + DM ++ +
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEV 205
Query: 163 ISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR 222
+ M PD++ + L LC++G+V +A K + + + ++L + CR
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGW-CR 264
Query: 223 SNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVL 282
+ AK +L M G PDIV + +L+ G+ G + +A + M + G +PN
Sbjct: 265 VGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANC 324
Query: 283 YNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMK 341
Y +I LCK + DV+TY L++G+C GKID+ + M
Sbjct: 325 YTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI 384
Query: 342 NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
G+ + TY ++ K ++ ELM+ M + PD Y ++I K +
Sbjct: 385 KKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVK 444
Query: 402 EVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
E ++L + M G+ P T+ +++ L +G
Sbjct: 445 EAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 5/275 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
++Y C+ K++EA V + + G P++V + ++ G M A ++ M
Sbjct: 258 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRR- 316
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
P++ Y LI CK+ ++ A K+ EM + +V TY L+ G+ + ++
Sbjct: 317 --GFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKID 374
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+ + + D+M+KKGL+ + + Y ++ + E L+ M PD Y+++
Sbjct: 375 KCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVI 434
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL- 241
+ C+ G V EA + +++ EN L + I+IN L L A M RGL
Sbjct: 435 RLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF 494
Query: 242 -VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
V T L++ K+ +E A V+ + G
Sbjct: 495 SVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKG 529
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 4/270 (1%)
Query: 6 ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYS 65
ALCK + +A +F ++ N+ F ++ C++G M A V+ +M +
Sbjct: 227 ALCKHGSVKDAAKLF-EDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQM---NEAG 282
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
PD + Y L+ G+ GK+ A L +M + PN Y LI + +EEA
Sbjct: 283 FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 342
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
++ EM + + V Y ++ G ++ +++ M+ + P + TY +
Sbjct: 343 KVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAH 402
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
+ + E + K+ + D +N++I C+ + A +L M GL P +
Sbjct: 403 EKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGV 462
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
TF +I+G +G + A +++M+ G
Sbjct: 463 DTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 120/305 (39%), Gaps = 68/305 (22%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSK--- 57
V+I ALCK ++ EAM VF ++ +VVT+ ++ CK G +D V+
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 58 -----------------------------MEVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
ME M PD YN +I CK+G++
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKE 445
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A +L NEM E + P V T+ +I+G + L EA EM+ +GL S Y T
Sbjct: 446 AVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQ-YGT--- 501
Query: 149 WLYVEGDMEGVSLLISSMV-DNRIPPDKFTYSILT-KGLCRNGNVNEAFKFHSKILENNL 206
+ LL+++++ D ++ K +S +T KG C E N+
Sbjct: 502 ----------LKLLLNTVLKDKKLEMAKDVWSCITSKGAC----------------ELNV 535
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
+ S I I+ L A M +P TF L+ G K N E A +
Sbjct: 536 L----SWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGE 591
Query: 267 VYEKM 271
+ EK+
Sbjct: 592 ITEKV 596
>AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23133514-23135313 REVERSE
Length = 599
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 132/273 (48%), Gaps = 3/273 (1%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
KL + V + LK PN++T+ ++++ C++ + A ++ + M + ++PD +
Sbjct: 278 KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM---IDHGLKPDIV 334
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
+N ++ G + K + A KL + M K PNVR+Y +I + + S+E A D+M
Sbjct: 335 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
+ GL ++ +Y +I + ++ V L+ M + PPD TY+ L K +
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
+ ++K+++N + + N+++ + N + + M +G+ PD ++ L
Sbjct: 455 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 514
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYN 284
I G EG A + E+M+ G K L+ YN
Sbjct: 515 IRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 152/364 (41%), Gaps = 36/364 (9%)
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
S TYN ++ K + + EM K ++ + T+ + ++ A+ ++A + +
Sbjct: 195 SRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
M K + N ++ L + +L + + R P+ TY++L G CR
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVR 312
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
N+ EA + + ++++ L D +HN+++ L RS S A +L M +G P++ ++
Sbjct: 313 NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM 309
+I CK+ ++E A++ ++ M+ SG +P
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQP------------------------------- 401
Query: 310 NLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
D Y LI G+ K+D + M+ G + TYN LI + +
Sbjct: 402 ---DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 458
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
+ MI P T+ +++ S+ + E + D M+ KG+ P +Y ++ L
Sbjct: 459 RIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 518
Query: 430 LQEG 433
+ EG
Sbjct: 519 ISEG 522
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 144/352 (40%), Gaps = 41/352 (11%)
Query: 53 KVVSKMEVMSVYSIRPDSITYNCLIG--GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYAT 110
K V E+M Y + T NCL+ G K+GK A+ L +++ E+ PN+ TY
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGK--EAQVLFDKLKER-FTPNMMTYTV 303
Query: 111 LIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNR 170
L++G+ R R+L EA R+ W + M+D+
Sbjct: 304 LLNGWCRVRNLIEAARI---------------------W--------------NDMIDHG 328
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
+ PD ++++ +GL R+ ++A K + + S+ I+I C+ +++ A
Sbjct: 329 LKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 388
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
+ M GL PD + LI G + ++ ++ ++M + G P+ YN++I +
Sbjct: 389 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLM 448
Query: 291 CKEEXXXXXXXXXXXXXXMNLFDVI-TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
++ + I T+N ++ Y + + A M GI +
Sbjct: 449 ANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDD 508
Query: 350 ATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
+Y LI L G ++A ++ M+ +G I Y F + PE
Sbjct: 509 NSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE 560
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 3/206 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV++ L + K +A+ +F+ G PNV ++ ++I CK +M+ A++ M V
Sbjct: 337 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM-V 395
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S ++PD+ Y CLI GF KL +L EM EK P+ +TY LI + +
Sbjct: 396 DS--GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKM 453
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
E R+ ++M++ + + +N ++ +V + E + M+ I PD +Y++
Sbjct: 454 PEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTV 513
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNL 206
L +GL G EA ++ ++L+ +
Sbjct: 514 LIRGLISEGKSREACRYLEEMLDKGM 539
>AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4792072-4793868 REVERSE
Length = 598
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 132/273 (48%), Gaps = 3/273 (1%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSI 71
KL + V + LK PN++T+ ++++ C++ + A ++ + M + ++PD +
Sbjct: 277 KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM---IDHGLKPDIV 333
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
+N ++ G + K + A KL + M K PNVR+Y +I + + S+E A D+M
Sbjct: 334 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 393
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
+ GL ++ +Y +I + ++ V L+ M + PPD TY+ L K +
Sbjct: 394 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 453
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
+ ++K+++N + + N+++ + N + + M +G+ PD ++ L
Sbjct: 454 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 513
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYN 284
I G EG A + E+M+ G K L+ YN
Sbjct: 514 IRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 153/365 (41%), Gaps = 36/365 (9%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
DS TYN ++ K + + EM K ++ + T+ + ++ A+ ++A +
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIF 251
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
+ M K + N ++ L + +L + + R P+ TY++L G CR
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRV 310
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
N+ EA + + ++++ L D +HN+++ L RS S A +L M +G P++ ++
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
+I CK+ ++E A++ ++ M+ SG +P
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMVDSGLQP------------------------------ 400
Query: 309 MNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
D Y LI G+ K+D + M+ G + TYN LI + +
Sbjct: 401 ----DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 456
Query: 369 KELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSP 428
+ MI P T+ +++ S+ + E + D M+ KG+ P +Y ++
Sbjct: 457 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Query: 429 LLQEG 433
L+ EG
Sbjct: 517 LISEG 521
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 144/352 (40%), Gaps = 41/352 (11%)
Query: 53 KVVSKMEVMSVYSIRPDSITYNCLIG--GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYAT 110
K V E+M Y + T NCL+ G K+GK A+ L +++ E+ PN+ TY
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGK--EAQVLFDKLKER-FTPNMMTYTV 302
Query: 111 LIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNR 170
L++G+ R R+L EA R+ W + M+D+
Sbjct: 303 LLNGWCRVRNLIEAARI---------------------W--------------NDMIDHG 327
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
+ PD ++++ +GL R+ ++A K + + S+ I+I C+ +++ A
Sbjct: 328 LKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 387
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
+ M GL PD + LI G + ++ ++ ++M + G P+ YN++I +
Sbjct: 388 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLM 447
Query: 291 CKEEXXXXXXXXXXXXXXMNLFDVI-TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
++ + I T+N ++ Y + + A M GI +
Sbjct: 448 ANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDD 507
Query: 350 ATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
+Y LI L G ++A ++ M+ +G I Y F + PE
Sbjct: 508 NSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE 559
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 3/206 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV++ L + K +A+ +F+ G PNV ++ ++I CK +M+ A++ M V
Sbjct: 336 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM-V 394
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S ++PD+ Y CLI GF KL +L EM EK P+ +TY LI + +
Sbjct: 395 DS--GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKM 452
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
E R+ ++M++ + + +N ++ +V + E + M+ I PD +Y++
Sbjct: 453 PEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTV 512
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNL 206
L +GL G EA ++ ++L+ +
Sbjct: 513 LIRGLISEGKSREACRYLEEMLDKGM 538
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 2/235 (0%)
Query: 194 AFKFHSKILENN-LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
AF+F E D+ ++N +++ L ++ +L M +GL+ + TF +
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAM 235
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF 312
+ AV ++E M K K + N +++ L + +
Sbjct: 236 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP 295
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
+++TY L+NG+C + EA M + G+ + +N ++ L + A +L
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 355
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
VM +G P+ +YTI+I F K+ S E I+ D MV G+ P Y +++
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 184/413 (44%), Gaps = 21/413 (5%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLAL---KVVSK 57
+ +I A +E + E +F +K G+ P+ F I+ G ++ VV K
Sbjct: 150 SAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK 209
Query: 58 MEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR 117
+ + S + N ++ + K G+L A K M E+D++ + +++ Y +
Sbjct: 210 LGMSSCLRVS------NSILAVYAKCGELDFATKFFRRMRERDVI----AWNSVLLAYCQ 259
Query: 118 ARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFT 177
EEA L EM K+G+ V +N +I G + L+ M I D FT
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT 319
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
++ + GL NG +A K+ ++ +A + ++ C + + S+
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS-ACSCLKVINQGSEVHSIA 378
Query: 238 VR-GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXX 296
V+ G + D++ SL+D + K G +E+A +V++ S + ++ +NS+I G C+
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD----SVKNKDVYTWNSMITGYCQAGYC 434
Query: 297 XXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFA-FSFAMKNAGIAANHATYNT 354
NL ++IT+NT+I+GY +G EA F K+ + N AT+N
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNL 494
Query: 355 LINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLH 407
+I + G +A EL + M F+P+ +T L+ + + + V ++H
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIH 547
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 171/404 (42%), Gaps = 40/404 (9%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N V+ A C+ K EA+ + K GI P +VT+N++I ++G D A+ ++ KME
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME- 309
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ I D T+ +I G G A + +M +VPN T + + S +
Sbjct: 310 --TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKV 367
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ + + +K G + + ++ N+++ G +E + S V N+ D +T++
Sbjct: 368 INQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS-VKNK---DVYTWNS 423
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ G C+ G +A++ +++ + NL + + N +I+ ++ + A L M G
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Query: 241 LVP-DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVL----------------- 282
V + T+ +I G+ + G + A++++ KM S PN V
Sbjct: 484 KVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMV 543
Query: 283 --------------YNSVINGLCKE-EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNS 327
++V N L M D+IT+N+LI GY
Sbjct: 544 REIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLH 603
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
G A A MK GI N T +++I +G++ + K++
Sbjct: 604 GSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKV 647
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 142/336 (42%), Gaps = 25/336 (7%)
Query: 98 EKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME 157
E +I+P+ + D R SL EA + D + ++G + Y ++ E ++
Sbjct: 44 EPNIIPDEQ-----FDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLL-----ESCID 93
Query: 158 GVSLLISSMVDNRI----PPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
S+ + ++ R PD F + L + G + +A K + E NL F+
Sbjct: 94 SGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL----FTW 149
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
+ +I R N +L M G++PD F ++ G G+VE ++ ++K
Sbjct: 150 SAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK 209
Query: 274 SGEKPNLVLYNSVIN--GLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKID 331
G L + NS++ C E M DVI +N+++ YC +GK +
Sbjct: 210 LGMSSCLRVSNSILAVYAKCGE-----LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHE 264
Query: 332 EAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
EA M+ GI+ T+N LI +LG A +LM+ M G D T+T +I
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 392 TSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
+ + + + M L GV+P+ T + VS
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS 360
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 156/414 (37%), Gaps = 89/414 (21%)
Query: 7 LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSI 66
LC+ LLEA + G T+ +++ G++ L + ++ + +
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFT---- 111
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
PD L+ + K G + A K+ + M E+ N+ T++ +I YSR E +
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAK 167
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLC 186
L MMK G++ PD F + + +G
Sbjct: 168 LFRLMMKDGVL-----------------------------------PDDFLFPKILQGCA 192
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
G+V HS +++ + N ++ + L A + M R D++
Sbjct: 193 NCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVI 248
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXX 306
+ S++ +C+ G E AV++ ++M K G P LV
Sbjct: 249 AWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV------------------------- 283
Query: 307 XXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
T+N LI GY GK D A M+ GI A+ T+ +I+ L G
Sbjct: 284 ---------TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRY 334
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVI----KLHDYMVLKGVI 416
QA ++ + M L G VP+ +T I S CS +VI ++H V G I
Sbjct: 335 QALDMFRKMFLAGVVPNAVT----IMSAVSACSCLKVINQGSEVHSIAVKMGFI 384
>AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6090954-6092333 FORWARD
Length = 459
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 134/329 (40%), Gaps = 35/329 (10%)
Query: 65 SIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEA 124
S P S+ Y L K K+ +M + + + T +I+ Y + +++A
Sbjct: 106 SYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQA 165
Query: 125 FRLCDEMMKK-GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
L + + K G +YN+++H L G LI M+ + PDK TY+IL
Sbjct: 166 VELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVN 225
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
G C G + EA +F ++ A ++LI L + L AK++++ M G VP
Sbjct: 226 GWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVP 285
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
DI TF LI+ K G VE +++Y Y + GLC
Sbjct: 286 DIQTFNILIEAISKSGEVEFCIEMY--------------YTACKLGLC------------ 319
Query: 304 XXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLG 363
D+ TY TLI GKIDEAF G + Y +I +C+ G
Sbjct: 320 --------VDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNG 371
Query: 364 HIQQAKELMKVMILQGFVPDYITYTILIT 392
A M ++ P+ YT+LIT
Sbjct: 372 MFDDAFSFFSDMKVKAHPPNRPVYTMLIT 400
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +++ALC A ++ R ++ G+ P+ T+ ++++ C G M A + + +M
Sbjct: 186 NSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM-- 243
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
S P + + LI G G L A+++ ++M + VP+++T+ LI+ S++
Sbjct: 244 -SRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+E + K GL ++ Y T+I + G ++ L+++ V++ P Y+
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAP 362
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ KG+CRNG ++AF F S + + + +LI R A L M G
Sbjct: 363 IIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMG 422
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
LVP F + DG G + A+++ +
Sbjct: 423 LVPISRCFDMVTDGLKNGGKHDLAMRIEQ 451
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 125/301 (41%), Gaps = 3/301 (0%)
Query: 34 TFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLK 93
T II+ K G +D A+++ + V + YN L+ C + A L
Sbjct: 148 TLCFIIEQYGKNGHVDQAVELFNG--VPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALI 205
Query: 94 NEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
M+ K + P+ RTYA L++G+ A ++EA DEM ++G + + +I L
Sbjct: 206 RRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNA 265
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
G +E ++S M PD T++IL + + ++G V + + + L D ++
Sbjct: 266 GYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTY 325
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
LI + + + A +LL + G P + +I G C+ G ++A + M
Sbjct: 326 KTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKV 385
Query: 274 SGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVIT-YNTLINGYCNSGKIDE 332
PN +Y +I + M L + ++ + +G N GK D
Sbjct: 386 KAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDL 445
Query: 333 A 333
A
Sbjct: 446 A 446
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 2/185 (1%)
Query: 251 LIDGHCKEGNVENAVQVYEKMMKS-GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM 309
+I+ + K G+V+ AV+++ + K+ G + + +YNS+++ LC +
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 310 NL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
L D TY L+NG+C++GK+ EA F M G + LI L G+++ A
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 369 KELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSP 428
KE++ M GFVPD T+ ILI + SK E I+++ G+ TYK ++
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPA 331
Query: 429 LLQEG 433
+ + G
Sbjct: 332 VSKIG 336
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 2/243 (0%)
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFS-HNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
+NG+V++A + + + + + +N L++ LC GA L+ M +GL PD
Sbjct: 158 KNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDK 217
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXX 305
T+ L++G C G ++ A + ++M + G P + +I GL
Sbjct: 218 RTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSK 277
Query: 306 XXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGH 364
D+ T+N LI SG+++ + G+ + TY TLI + K+G
Sbjct: 278 MTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGK 337
Query: 365 IQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKA 424
I +A L+ + G P Y +I + ++ M +K P++ Y
Sbjct: 338 IDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTM 397
Query: 425 VVS 427
+++
Sbjct: 398 LIT 400
>AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27598412-27599812 FORWARD
Length = 466
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 138/293 (47%), Gaps = 7/293 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ ALCK C L++ R ++H + P+ TFN++ C++ A+K+ +E
Sbjct: 136 NMLLDALCK-CGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKL---LEE 191
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIV---PNVRTYATLIDGYSR 117
M +P++ TY I FC+ G + A L + M+ K P +T+A +I ++
Sbjct: 192 MIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAK 251
Query: 118 ARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFT 177
EE F L M+ G + + Y VI + + ++ + M + PPD T
Sbjct: 252 NDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVT 311
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
Y+ + LC N +EA K + +++E+ ++N+LI+ ++ GA M
Sbjct: 312 YNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMD 371
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
R V D+ T+ ++I+G + A + E+++ G K +++S + L
Sbjct: 372 KRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRL 424
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 7/264 (2%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
P + FNM++D CK G + ++ +M + ++PD+ T+N L G+C++ A
Sbjct: 130 PEINAFNMLLDALCKCGLVKEGEALLRRMR----HRVKPDANTFNVLFFGWCRVRDPKKA 185
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNT---V 146
KL EM+E P TY ID + +A ++EA L D M+ KG +++ T +
Sbjct: 186 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 245
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
I L E LI M+ PD TY + +G+C V+EA+KF ++
Sbjct: 246 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 305
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
D ++N + LC + A +L M P + T+ LI + + + A
Sbjct: 306 PPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 365
Query: 267 VYEKMMKSGEKPNLVLYNSVINGL 290
+ +M K ++ Y ++INGL
Sbjct: 366 TWTEMDKRDCVQDVETYCAMINGL 389
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 5/265 (1%)
Query: 170 RIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGA 229
+ P+ +++L LC+ G V E + + + + DA + N+L CR + A
Sbjct: 127 KTQPEINAFNMLLDALCKCGLVKEGEALLRR-MRHRVKPDANTFNVLFFGWCRVRDPKKA 185
Query: 230 KQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEK---PNLVLYNSV 286
+LL M G P+ T+ + ID C+ G V+ A +++ M+ G P + +
Sbjct: 186 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 245
Query: 287 INGLCKEEXXXXXXXXXXXXXXMN-LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGI 345
I L K + L DV TY +I G C + K+DEA+ F M N G
Sbjct: 246 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 305
Query: 346 AANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIK 405
+ TYN + LC+ +A +L M+ P TY +LI+ F + P+
Sbjct: 306 PPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 365
Query: 406 LHDYMVLKGVIPHKQTYKAVVSPLL 430
M + + +TY A+++ L
Sbjct: 366 TWTEMDKRDCVQDVETYCAMINGLF 390
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 141/347 (40%), Gaps = 38/347 (10%)
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
+P+ +N L+ CK G + E L M + + P+ T+ L G+ R R ++A +
Sbjct: 129 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMK 187
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIP---PDKFTYSILTK 183
L +EM++ G + Y I G ++ + L M+ P T++++
Sbjct: 188 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 247
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
L +N E F+ +++ + D ++ +I +C + + A + L M +G P
Sbjct: 248 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 307
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
DIVT+ + C+ + A+++Y +M++S P+
Sbjct: 308 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPS------------------------ 343
Query: 304 XXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLG 363
V TYN LI+ + D AF M + TY +IN L
Sbjct: 344 ----------VQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCH 393
Query: 364 HIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYM 410
++A L++ ++ +G Y + + S+ + + + K+ ++M
Sbjct: 394 RAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHM 440
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
Query: 157 EGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNIL 216
EG +LL + +R+ PD T+++L G CR + +A K +++E + F++
Sbjct: 150 EGEALL--RRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAA 207
Query: 217 INYLCRSNNLSGAKQLLASMYVRGLV---PDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
I+ C++ + A L M +G P TF +I K E ++ +M+
Sbjct: 208 IDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMIS 267
Query: 274 SGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDE 332
+G P++ Y VI G+C E D++TYN + C + K DE
Sbjct: 268 TGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDE 327
Query: 333 AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
A M + A + TYN LI+ ++ A M + V D TY +I
Sbjct: 328 ALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN 387
Query: 393 SFSKKCSPEEVIKLHDYMVLKGV-IPHK 419
+E L + +V KG+ +P++
Sbjct: 388 GLFDCHRAKEACFLLEEVVNKGLKLPYR 415
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 38/223 (17%)
Query: 212 SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
+ N+L++ LC+ + + LL M R + PD TF L G C+ + + A+++ E+M
Sbjct: 134 AFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 192
Query: 272 MKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKID 331
+++G KP + TY I+ +C +G +D
Sbjct: 193 IEAGHKP----------------------------------ENFTYCAAIDTFCQAGMVD 218
Query: 332 EA---FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYT 388
EA F F +A A T+ +I L K ++ EL+ MI G +PD TY
Sbjct: 219 EAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYK 278
Query: 389 ILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
+I +E K D M KG P TY + L +
Sbjct: 279 DVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCE 321
>AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796);
ATP binding | chr3:18256086-18257975 FORWARD
Length = 629
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 192/441 (43%), Gaps = 15/441 (3%)
Query: 4 IYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSV 63
I L +E L EA S+ P + T N ++ + L++ ++
Sbjct: 102 ILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHG---FINQ 158
Query: 64 YSIRPDSITYNCLIGGFCKMGKLTMA-EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
I P+ ITYN + + + K +A E K + + P++ T+ L+ G +LE
Sbjct: 159 AGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLE 218
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDN--RIPPDKFTYSI 180
+A + ++M KG V++ V+Y+ ++ D +GV L + + D Y
Sbjct: 219 KAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQ 278
Query: 181 LTKGLCRNGNVNEAFK-FHSKILENNLIE-DAFSHNILINYLCRSNNLSGAKQLLASMY- 237
L KG EA + + + EN+ + A ++N ++ L + A +L ++
Sbjct: 279 LMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKK 338
Query: 238 ----VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
R L ++ TF +++G+C G E A++V+ +M P+ + +N+++N LC
Sbjct: 339 EHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDN 398
Query: 294 EXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
E N+ D TY L++ GKIDE A+ M + + N A Y
Sbjct: 399 ELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVY 458
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVL 412
N L + L K G + AK +M+ + + D Y ++ + S+ +E++K+ D M+
Sbjct: 459 NRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDE-AYKFIMRALSEAGRLDEMLKIVDEMLD 517
Query: 413 KGVIPHKQTYKAVVSPLLQEG 433
+ + + V L++G
Sbjct: 518 DDTVRVSEELQEFVKEELRKG 538
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV++ C K EAM VF + P+ ++FN +++ C + A K+ +ME
Sbjct: 354 NVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEE 413
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+V +PD TY L+ K GK+ M+E ++ PN+ Y L D +A
Sbjct: 414 KNV---KPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGK 470
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDN---RIPPD--K 175
L++A D M+ K L M+ Y ++ L G ++ + ++ M+D+ R+ + +
Sbjct: 471 LDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQE 529
Query: 176 FTYSILTKGLCRNGNV 191
F L KG R G++
Sbjct: 530 FVKEELRKG-GREGDL 544
>AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4543265-4545256 REVERSE
Length = 634
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 168/371 (45%), Gaps = 9/371 (2%)
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
I PD N L+ G G A+KL +M K + N + I + R+ +
Sbjct: 150 IHPD--VCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLL 207
Query: 126 RLCDEMMKKGLVMN-SVIYNTVIHWL-YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
RL DE+ K L +N S+I ++H L +M+ +L + + PD Y ++ +
Sbjct: 208 RLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYIL-EELRNIDCKPDFMAYRVIAE 266
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
GN+ E K + + + + I L + L+ AK++ A + V G P
Sbjct: 267 AFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEV-AEVIVSGKFP 325
Query: 244 -DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
D +LI G + ++AV+ M+ +G+ P + + + LC+ +
Sbjct: 326 MDNDILDALI-GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKA 384
Query: 303 XXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
F ++ +Y+ +I+ C +G++ E++ MK G+A + + YN LI CK
Sbjct: 385 YELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK 444
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQT 421
I+ AK+L M ++G + TY +LI S++ EE ++L D M+ +G+ P +
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETI 504
Query: 422 YKAVVSPLLQE 432
Y +++ L +E
Sbjct: 505 YMSLIEGLCKE 515
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 8/210 (3%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKL 86
G P + T + + C+ D +K E++S + +Y+ +I CK G++
Sbjct: 357 GKLPAIRTLSKLSKNLCRHDKSDHLIKA---YELLSSKGYFSELQSYSLMISFLCKAGRV 413
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
+ EM ++ + P+V Y LI+ +A + A +L DEM +G MN YN +
Sbjct: 414 RESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVL 473
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
I L EG+ E L M++ I PD+ Y L +GLC+ + A + K +E +
Sbjct: 474 IRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERD- 532
Query: 207 IEDAFSHNILINY---LCRSNNLSGAKQLL 233
+ +L + LC + + A QLL
Sbjct: 533 -HKTVTRRVLSEFVLNLCSNGHSGEASQLL 561
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 3/198 (1%)
Query: 96 MMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGD 155
M+ +P +RT + L R + + + + KG Y+ +I +L G
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGR 412
Query: 156 MEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI 215
+ + M + PD Y+ L + C+ + A K ++ + ++N+
Sbjct: 413 VRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 216 LINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
LI L + +L M RG+ PD + SLI+G CKE +E A++V+ K M+
Sbjct: 473 LIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERD 532
Query: 276 EK--PNLVLYNSVINGLC 291
K VL V+N LC
Sbjct: 533 HKTVTRRVLSEFVLN-LC 549
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+++I LCK ++ E+ + K G+ P+V +N +I+ CK + A K+ +
Sbjct: 401 SLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKL---WDE 457
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M V + + TYN LI + G+ + +L ++M+E+ I P+ Y +LI+G +
Sbjct: 458 MFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETK 517
Query: 121 LE---EAFRLCDE 130
+E E FR C E
Sbjct: 518 IEAAMEVFRKCME 530
>AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11126151-11128334 FORWARD
Length = 727
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 167/420 (39%), Gaps = 38/420 (9%)
Query: 14 LEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITY 73
L V+ + K G P V +N I+D K G DLAL V E + +S T+
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAV---YEDFKEDGLVEESTTF 266
Query: 74 NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK 133
L+ G CK G++ ++ M E P+V Y +I +L+ + R+ DEM +
Sbjct: 267 MILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRR 326
Query: 134 KGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNE 193
+ + + Y T++ L +G +E L M +I D+ Y +L +G +G V
Sbjct: 327 DEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRS 386
Query: 194 AFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLID 253
A ++++ I D +N +I LC N + A +L L PD T ++
Sbjct: 387 ACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMV 446
Query: 254 GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD 313
+ + + V E++ + G P LC +E +++F
Sbjct: 447 AYVVMNRLSDFSNVLERIGELG-YPVSDYLTQFFKLLCADE--------EKNAMALDVF- 496
Query: 314 VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
+ +K G + + YN L+ L K+G IQ++ L
Sbjct: 497 ------------------------YILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLFY 531
Query: 374 VMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
M GF PD +Y+I I F +K + H+ ++ +P Y ++ L Q G
Sbjct: 532 EMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIG 591
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 137/326 (42%), Gaps = 34/326 (10%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
D YN + G A++L M + P+ + + LI ++ R + +
Sbjct: 157 DFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVY 216
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
++M K G +YN ++ L G + + ++ + + T+ IL KGLC+
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKA 276
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
G + E + ++ EN D F++ +I L NL + ++ M + PD++ +
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
G+L+ G CK+G VE +++ +M K +L + I
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEM-----KGKQILIDREI--------------------- 370
Query: 309 MNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
Y LI G+ GK+ A + ++G A+ YN +I LC + + +A
Sbjct: 371 --------YRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKA 422
Query: 369 KELMKVMILQGFVPDYITYTILITSF 394
+L +V I + PD+ T + ++ ++
Sbjct: 423 YKLFQVAIEEELEPDFETLSPIMVAY 448
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 193/441 (43%), Gaps = 16/441 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ AL K A++V+ + G+ TF +++ CK G ++ L+++ +M
Sbjct: 232 NRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 291
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+PD Y +I G L + ++ +EM +I P+V Y TL+ G +
Sbjct: 292 NLC---KPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGR 348
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+E + L EM K ++++ IY +I +G + L +VD+ D Y+
Sbjct: 349 VERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNA 408
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFS-HNILINYLCRSNNLSGAKQLLASMYVR 239
+ KGLC V++A+K +E L D + I++ Y+ N LS +L +
Sbjct: 409 VIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVV-MNRLSDFSNVLERIGEL 467
Query: 240 GL-VPDIVT-FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
G V D +T F L+ +E N A+ V+ ++K+ ++ +YN ++ L K
Sbjct: 468 GYPVSDYLTQFFKLLCAD-EEKNA-MALDVF-YILKTKGHGSVSVYNILMEALYKMGDIQ 524
Query: 298 XXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
+ D +Y+ I + G + A +F + + A Y +L
Sbjct: 525 KSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLT 584
Query: 357 NFLCKLGHIQQAKELMKVMILQGFV---PDYITYTILITSFSKKCSPEEVIKLHDYMVLK 413
LC++G I L++ + G V P Y + + K + E+V+K+ D M +
Sbjct: 585 KGLCQIGEIDAVMLLVRECL--GNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQE 642
Query: 414 GVIPHKQTYKAVVSPLLQEGV 434
GV ++ Y A++S + + G
Sbjct: 643 GVFINEVIYCAIISGMSKHGT 663
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 119/299 (39%), Gaps = 5/299 (1%)
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
+KG + YN + L G L M PP + + IL + N
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
+ + K+ + F +N +++ L ++ A + GLV + TF L+
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL- 311
G CK G +E +++ ++M ++ KP++ Y ++I L E +
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 312 FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
DV+ Y TL+ G C G+++ + MK I + Y LI G ++ A L
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNL 390
Query: 372 MKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLL 430
+ ++ G++ D Y +I ++ KL + + + P +T +SP++
Sbjct: 391 WEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFET----LSPIM 445
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 89/237 (37%), Gaps = 34/237 (14%)
Query: 197 FHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHC 256
FH + D ++N L R+ + A QL M +G P F LI H
Sbjct: 145 FHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHA 204
Query: 257 KEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVIT 316
VYEKM K G KP + LYN +++ L K
Sbjct: 205 DNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVK------------------------ 240
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
NGY D A A K G+ T+ L+ LCK G I++ E+++ M
Sbjct: 241 -----NGY-----FDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMR 290
Query: 377 LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
PD YT +I + + + + +++ D M + P Y +V L ++G
Sbjct: 291 ENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDG 347
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 132/299 (44%), Gaps = 25/299 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N VI LC ++ +A +F +++ + P+ T + I+ +A V++++
Sbjct: 407 NAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIM----------VAYVVMNRLSD 456
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEM-------MEKDIVPNVRTYATLID 113
S R + Y + + KL A++ KN M ++ +V Y L++
Sbjct: 457 FSNVLERIGELGYP-VSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILME 515
Query: 114 GYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPP 173
+ ++++ L EM K G +S Y+ I +GD++ +++ P
Sbjct: 516 ALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVP 575
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA---FSHNILINYLCRSNNLSGAK 230
Y LTKGLC+ G ++ + L N +E F + + + ++C+ +N
Sbjct: 576 SIAAYLSLTKGLCQIGEIDAVMLLVRECLGN--VESGPMEFKYALTVCHVCKGSNAEKVM 633
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG--EKPNLVLYNSVI 287
+++ M G+ + V + ++I G K G ++ A +V+ ++ K + ++V+Y ++
Sbjct: 634 KVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEML 692
>AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1672161-1673675 FORWARD
Length = 504
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 135/316 (42%), Gaps = 11/316 (3%)
Query: 124 AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIP-----PDKFTY 178
A ++ EM +G + Y ++ +EG +E + L+ SM RI D Y
Sbjct: 171 ASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMF-WRISQKGSGEDIVVY 229
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNL--IEDAFSHNILINYLCRSNNLSGAKQLLASM 236
IL LC G V++A + KIL L + + H ++ S + K+LL
Sbjct: 230 RILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTET 289
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXX 296
+RG +P + ++ ++ +EG + +V M G +P +Y + + LC+
Sbjct: 290 LIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKL 349
Query: 297 XXXXXXXXXXXXMN--LFDVITYNTLINGYCNSGKIDEAFAFSFAM-KNAGIAANHATYN 353
L V YN LI G C+ GK EA + M K AN TY
Sbjct: 350 KEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQ 409
Query: 354 TLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLK 413
TL++ LC+ G +A ++M+ M+++ P TY ++I E + + MV +
Sbjct: 410 TLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQ 469
Query: 414 GVIPHKQTYKAVVSPL 429
++P +KA+ +
Sbjct: 470 DMVPESSVWKALAESV 485
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 153/392 (39%), Gaps = 51/392 (13%)
Query: 14 LEAMSVFYRSLKHGIW---PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDS 70
LEA +R +G W + N+++ V C++ DLA +V +M Y PD
Sbjct: 132 LEAACHIFRKYCYG-WEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCY---PDR 187
Query: 71 ITYNCLIGGFCKMGKLTMAEKLKNEMM----EKDIVPNVRTYATLIDGYSRARSLEEAFR 126
+Y L+ GFC GKL A L M +K ++ Y L+D A +++A
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 127 LCDEMMKKGLVMNSVIYNTVI--HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKG 184
+ ++++KGL Y+ + HW +E V L++ + P +YS +
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 185 LCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD 244
L G + E +++L +M +G P
Sbjct: 308 LFEEGKLVEG-----------------------------------EEVLLAMRSKGFEPT 332
Query: 245 IVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE-KPNLVLYNSVINGLCKE--EXXXXXXX 301
+G+ + C+ G ++ AV V K M G P + +YN +I GLC +
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYL 392
Query: 302 XXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
+ + TY TL++G C G+ EA M TY+ +I LC
Sbjct: 393 KKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCD 452
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILITS 393
+ +A ++ M+ Q VP+ + L S
Sbjct: 453 MDRRYEAVMWLEEMVSQDMVPESSVWKALAES 484
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 132/298 (44%), Gaps = 9/298 (3%)
Query: 1 NVVIYALCKECKLLEAM----SVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVS 56
+++ C E KL EA S+F+R + G ++V + +++D C G +D A++++
Sbjct: 191 RILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILG 250
Query: 57 KMEVMSVYSIRPDSITYNCLIGGFCKMGK-LTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
K+ + + P ++ G + + + ++L E + + +P + +Y+ +
Sbjct: 251 KILRKGLKA--PKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM-EGVSLLISSMVDNRIPPD 174
L E + M KG IY + L G + E VS++ M+ P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 175 KFTYSILTKGLCRNGNVNEAFKFHSKILEN-NLIEDAFSHNILINYLCRSNNLSGAKQLL 233
Y++L KGLC +G EA + K+ + + + + ++ L++ LCR A Q++
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 234 ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC 291
M ++ P + T+ +I G C AV E+M+ P ++ ++ +C
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 93/226 (41%), Gaps = 8/226 (3%)
Query: 216 LINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
+I R+ L A L S++ V ++F +L+ KE +E A ++ K
Sbjct: 87 VIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGW 146
Query: 276 E-KPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEA 333
E + N ++ LC+ + D +Y L+ G+C GK++EA
Sbjct: 147 EVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEA 206
Query: 334 ----FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
++ + + G + Y L++ LC G + A E++ ++ +G Y
Sbjct: 207 THLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHH 266
Query: 390 LITSFSKKCSP--EEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+ + S E V +L +++G IP +Y A+ + L +EG
Sbjct: 267 IEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEG 312
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 160/419 (38%), Gaps = 91/419 (21%)
Query: 29 WPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTM 88
WP V+T +++ + K ALK+ + + S + Y +I K ++
Sbjct: 6 WPRVLTPSLLSQILKKQKNPVTALKLFEEAK-ERFPSYGHNGSVYATMIDILGKSNRVLE 64
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
+ + M E +A++I +SRA LE+A L + + V S+ ++T++
Sbjct: 65 MKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQ 124
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
+ E ++E + K+ Y ++ +S+I
Sbjct: 125 EMVKESELEAACHIFR----------KYCY---------------GWEVNSRIT------ 153
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQV- 267
+ N+L+ LC+ N A Q+ M +G PD ++ L+ G C EG +E A +
Sbjct: 154 ---ALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLL 210
Query: 268 ---YEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGY 324
+ ++ + G ++V+Y L++
Sbjct: 211 YSMFWRISQKGSGEDIVVY----------------------------------RILLDAL 236
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGH-------IQQAKELMKVMIL 377
C++G++D+A + G+ A Y+ + + GH I++ K L+ ++
Sbjct: 237 CDAGEVDDAIEILGKILRKGLKAPKRCYHHI-----EAGHWESSSEGIERVKRLLTETLI 291
Query: 378 QGFVPDYITYTILITSF---SKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+G +P +Y+ + T K EEV+ M KG P Y A V L + G
Sbjct: 292 RGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA---MRSKGFEPTPFIYGAKVKALCRAG 347
>AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587613-23588220 FORWARD
Length = 152
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M +SI P +ITYN +I GFCK ++ A+++ + M K P+V T++TLI+GY +A+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ + EM ++G+V N+V Y T+IH GD++ L++ M+ + PD T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 181 LTKGLCRNGNVNEAFKFHSKIL--ENNLIED 209
+ GLC + +AF + E++ +ED
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSEDHHLED 151
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 278 PNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAF 336
P + YNS+I+G CK++ DV+T++TLINGYC + ++D
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 337 SFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
M GI AN TY TLI+ C++G + A++L+ MI G PDYIT+ ++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL-- 125
Query: 397 KCSPEEVIK 405
CS +E+ K
Sbjct: 126 -CSKKELRK 133
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Query: 201 ILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGN 260
+L ++ ++N +I+ C+ + + AK++L SM +G PD+VTF +LI+G+CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 261 VENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNT 319
V+N ++++ +M + G N V Y ++I+G C+ + D IT++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 320 LINGYCNSGKIDEAFA 335
++ G C+ ++ +AFA
Sbjct: 121 MLAGLCSKKELRKAFA 136
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ P +T+ S+IDG CK+ V++A ++ + M G P++V ++++ING CK +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+ + +TY TLI+G+C G +D A M + G+A ++ T++ ++ L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 360 CKLGHIQQA 368
C +++A
Sbjct: 126 CSKKELRKA 134
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 65/124 (52%)
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
I P TY+ + G C+ V++A + + D + + LIN C++ +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
++ M+ RG+V + VT+ +LI G C+ G+++ A + +M+ G P+ + ++ ++ GL
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 291 CKEE 294
C ++
Sbjct: 126 CSKK 129
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I CK+ ++ +A + G P+VVTF+ +I+ CK +D +++ +M
Sbjct: 14 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 73
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ + +++TY LI GFC++G L A+ L NEM+ + P+ T+ ++ G +
Sbjct: 74 RGIVA---NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 121 LEEAFRLCDEMMK 133
L +AF + +++ K
Sbjct: 131 LRKAFAILEDLQK 143
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 24 LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
L+ I+P +T+N +ID CK +D A ++ ++ M+ PD +T++ LI G+CK
Sbjct: 2 LRWSIFPTTITYNSMIDGFCKQDRVDDAKRM---LDSMASKGCSPDVVTFSTLINGYCKA 58
Query: 84 GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIY 143
++ ++ EM + IV N TY TLI G+ + L+ A L +EM+ G+ + + +
Sbjct: 59 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 118
Query: 144 NTVIHWL 150
+ ++ L
Sbjct: 119 HCMLAGL 125
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 68/144 (47%)
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGN 190
M++ + ++ YN++I + ++ ++ SM PD T+S L G C+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 191 VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGS 250
V+ + ++ ++ + ++ LI+ C+ +L A+ LL M G+ PD +TF
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 251 LIDGHCKEGNVENAVQVYEKMMKS 274
++ G C + + A + E + KS
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKS 144
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%)
Query: 314 VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
ITYN++I+G+C ++D+A +M + G + + T++TLIN CK + E+
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 374 VMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
M +G V + +TYT LI F + + L + M+ GV P T+ +++ L
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
>AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4227975-4229630 REVERSE
Length = 551
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 124/250 (49%), Gaps = 9/250 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYR-SLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
N ++ A KL EAM F K GI P++VT+N +I C+ G+MD L + ++E
Sbjct: 161 NALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELE 220
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
PD I++N L+ F + +++ + M K++ PN+R+Y + + G +R +
Sbjct: 221 KNG---FEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNK 277
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+A L D M +G+ + YN +I V+ ++E V + M + + PD TY
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYC 337
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLAS---- 235
+L LC+ G+++ A + + +++ L+ + ++ L + + A QL+ +
Sbjct: 338 MLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGKLQ 397
Query: 236 MYVRGLVPDI 245
Y R L PD+
Sbjct: 398 SYFRYL-PDL 406
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 145/335 (43%), Gaps = 18/335 (5%)
Query: 8 CKECKLLEAMSVFYRSLK-------HGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
K KL + + F RS + HG++ F + A K +D L+ K +
Sbjct: 62 SKNSKLTQKVEKFKRSCESESFRQVHGLY---SAFIRRLREAKKFSTIDEVLQYQKKFDD 118
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ D + L+ G+ M + A KL +EM E + V+++ L+ Y ++
Sbjct: 119 IKS----EDFVIRIMLLYGYSGMAE--HAHKLFDEMPELNCERTVKSFNALLSAYVNSKK 172
Query: 121 LEEAFRLCDEMMKK-GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
L+EA + E+ +K G+ + V YNT+I L +G M+ + + + N PD +++
Sbjct: 173 LDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFN 232
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L + R E + + NL + S+N + L R+ + A L+ M
Sbjct: 233 TLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTE 292
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+ PD+ T+ +LI + + N+E ++ Y +M + G P+ V Y +I LCK+
Sbjct: 293 GISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRA 352
Query: 300 XXXXXXXXXMNLFDVIT-YNTLINGYCNSGKIDEA 333
L Y ++ +GKIDEA
Sbjct: 353 VEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEA 387
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 117/248 (47%), Gaps = 2/248 (0%)
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR-GLVPDIV 246
+G A K ++ E N S N L++ S L A + + + G+ PD+V
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXX 306
T+ ++I C++G++++ + ++E++ K+G +P+L+ +N+++ + E
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 307 XXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
NL ++ +YN+ + G + K +A MK GI+ + TYN LI ++
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
++ + M +G PD +TY +LI KK + +++ + + ++ YK V
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPV 374
Query: 426 VSPLLQEG 433
V L+ G
Sbjct: 375 VERLMGAG 382
>AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8017771-8019459 REVERSE
Length = 562
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 153/332 (46%), Gaps = 7/332 (2%)
Query: 34 TFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLK 93
T + ++ K G + A+ +ME Y ++ D+I N L+ K + A ++
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEME--KSYGVKTDTIAMNSLMDALVKENSIEHAHEVF 262
Query: 94 NEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
++ + I P+ RT+ LI G+ +AR ++A + D M + V Y + + E
Sbjct: 263 LKLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE 321
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
GD V+ ++ M +N P+ TY+I+ L ++ V EA + K+ E+ + DA +
Sbjct: 322 GDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMM- 272
+ LI+ L ++ A ++ M +G+ D++ + ++I E A+++ ++M
Sbjct: 382 SSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
Query: 273 KSGE--KPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGK 329
+ GE PN+ Y ++ C ++ ++ DV TY LI G C SGK
Sbjct: 442 EEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGK 501
Query: 330 IDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
++EA F G+ +T L++ L K
Sbjct: 502 VEEACLFFEEAVRKGMVPRDSTCKMLVDELEK 533
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 11/283 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ AL KE + A VF + L I P+ TFN++I CK D A + M++
Sbjct: 243 NSLMDALVKENSIEHAHEVFLK-LFDTIKPDARTFNILIHGFCKARKFDDARAM---MDL 298
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M V PD +TY + +CK G ++ EM E PNV TY ++ +++
Sbjct: 299 MKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQ 358
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+ EA + ++M + G V ++ Y+++IH L G + + + M + + D Y+
Sbjct: 359 VAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNT 418
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI-----LINYLCRSNNLSGAKQLLAS 235
+ + A + ++ + ++ S N+ L+ C + LL
Sbjct: 419 MISAALHHSRDEMALRLLKRMEDEE--GESCSPNVETYAPLLKMCCHKKKMKLLGILLHH 476
Query: 236 MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKP 278
M + D+ T+ LI G C G VE A +E+ ++ G P
Sbjct: 477 MVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 148/367 (40%), Gaps = 47/367 (12%)
Query: 107 TYATLIDGYSRARSLEEAFRLCDEMMK----KGLVMNSVIYNTVIHWLYVEGDM-EGVSL 161
TY ++D + R+ + + L +EM K K + ++++ + V+ L G + V
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTM--SKVMRRLAKSGKYNKAVDA 225
Query: 162 LISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLC 221
+ + D + L L + ++ A + K+ + + DA + NILI+ C
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF-DTIKPDARTFNILIHGFC 284
Query: 222 RSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLV 281
++ A+ ++ M V PD+VT+ S ++ +CKEG+ ++ E+M ++G PN+V
Sbjct: 285 KARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVV 344
Query: 282 LYNSVINGLCKEEXXXXXXXXXXXXXXMN-LFDVITYNTLINGYCNSGKIDEAFAFSFAM 340
Y V++ L K + + D Y++LI+ +G+ +A M
Sbjct: 345 TYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 341 KNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI----------LQGFVP-------- 382
N G+ + YNT+I+ + A L+K M ++ + P
Sbjct: 405 TNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHK 464
Query: 383 --------------------DYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
D TY +LI EE + V KG++P T
Sbjct: 465 KKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTC 524
Query: 423 KAVVSPL 429
K +V L
Sbjct: 525 KMLVDEL 531
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKS-GEKPNLVLYNSVINGLCKEEXXXXXXXXXXX 305
T ++ K G AV + +M KS G K + + NS+++ L KE
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF-- 262
Query: 306 XXXMNLFDVI-----TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
+ LFD I T+N LI+G+C + K D+A A MK + TY + + C
Sbjct: 263 ---LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC 319
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
K G ++ E+++ M G P+ +TYTI++ S K E + +++ M G +P +
Sbjct: 320 KEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAK 379
Query: 421 TYKAVVSPLLQEG 433
Y +++ L + G
Sbjct: 380 FYSSLIHILSKTG 392
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 153/387 (39%), Gaps = 43/387 (11%)
Query: 72 TYNCLIGGFCKMGKLTMAEKLKNEMM--EKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
TYN ++ K + +L NEM E+ + + T + ++ +++ +A
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 130 EMMKK-GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
EM K G+ +++ N+++ L E +E + + D I PD T++IL G C+
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKA 286
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
++A + D ++ + C+ + ++L M G P++VT+
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
++ K V A+ VYEKM + G P+ Y+S+I+ L K
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTN 406
Query: 309 MNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNA------------------------ 343
+ DV+ YNT+I+ + + + A M++
Sbjct: 407 QGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKK 466
Query: 344 ----GIAANH----------ATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
GI +H +TY LI LC G +++A + + +G VP T +
Sbjct: 467 MKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKM 526
Query: 390 LITSFSKKCSPEEVIKLHDYMVLKGVI 416
L+ KK E +K+ + K +I
Sbjct: 527 LVDELEKKNMAEAKLKIQSLVQSKTMI 553
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 2/193 (1%)
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+ D + SL+D KE ++E+A +V+ K+ + KP+ +N +I+G CK
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTI-KPDARTFNILIHGFCKARKFDDA 292
Query: 300 XXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
DV+TY + + YC G M+ G N TY +++
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
L K + +A + + M G VPD Y+ LI SK ++ ++ + M +GV
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRD 412
Query: 419 KQTYKAVVSPLLQ 431
Y ++S L
Sbjct: 413 VLVYNTMISAALH 425
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 16/255 (6%)
Query: 4 IYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSV 63
+ A CKE + ++G PNVVT+ +++ K + AL V KM+
Sbjct: 315 VEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGC 374
Query: 64 YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEE 123
PD+ Y+ LI K G+ A ++ +M + + +V Y T+I E
Sbjct: 375 V---PDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEM 431
Query: 124 AFRLCDEMMK---KGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
A RL M + N Y ++ + M+ + +L+ MV N + D TY +
Sbjct: 432 ALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYIL 491
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L +GLC +G V EA F + + ++ + +L++ L N++ AK + S+
Sbjct: 492 LIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDEL-EKKNMAEAKLKIQSL---- 546
Query: 241 LVPDIVTFGSLIDGH 255
V ++ID H
Sbjct: 547 -----VQSKTMIDSH 556
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I+ L K + +A +F G+ +V+ +N +I A ++AL+++ +ME
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
S P+ TY L+ C K+ + L + M++ D+ +V TY LI G + +E
Sbjct: 444 GESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVE 503
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNR 170
EA +E ++KG+V ++ L + +M L I S+V ++
Sbjct: 504 EACLFFEEAVRKGMVPRDSTCKMLVDELE-KKNMAEAKLKIQSLVQSK 550
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 183/375 (48%), Gaps = 32/375 (8%)
Query: 25 KHGIWPNVVTFNMIIDVACKMGAMDL--ALKVVSKMEVMSVYSIRPDSITYNCLIGGFCK 82
K G+ ++ N +ID + G + + A+K+ KM D++++N ++GG K
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-------ERDTVSWNSMLGGLVK 197
Query: 83 MGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVI 142
G+L A +L +EM ++D++ ++ T++DGY+R R + +AF L ++M ++ N+V
Sbjct: 198 AGELRDARRLFDEMPQRDLI----SWNTMLDGYARCREMSKAFELFEKMPER----NTVS 249
Query: 143 YNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK--FTYSILTKGLCRNGNVNEAFKFHSK 200
++T++ GDME + M D P K T++I+ G G + EA + +
Sbjct: 250 WSTMVMGYSKAGDME----MARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQ 305
Query: 201 ILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGN 260
++ + L DA + ++ S LS ++ + + L + +L+D + K GN
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365
Query: 261 VENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNT 319
++ A V+ + K +LV +N++++GL + D +T+
Sbjct: 366 LKKAFDVFNDI----PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIA 421
Query: 320 LINGYCNSGKIDEAFAFSFAMKNA-GIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
++ ++G IDE + ++M+ + Y L++ L ++G +++A ++++ M ++
Sbjct: 422 VLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME 481
Query: 379 GFVPDYITYTILITS 393
P+ + + L+ +
Sbjct: 482 ---PNVVIWGALLGA 493
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 175/391 (44%), Gaps = 30/391 (7%)
Query: 6 ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYS 65
+LC++ L A+ VF + + PNV N +I + A V S+M+ +++
Sbjct: 62 SLCRQTNL--AVRVFNQVQE----PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFA 115
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL--EE 123
D+ TY L+ L + + + N + + + ++ LID YSR L +
Sbjct: 116 ---DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRD 172
Query: 124 AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
A +L ++M ++ ++V +N+++ L G++ L M D +++ +
Sbjct: 173 AMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLD 224
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
G R +++AF+ K+ E N + S + ++ ++ ++ A+ + M +
Sbjct: 225 GYARCREMSKAFELFEKMPERNTV----SWSTMVMGYSKAGDMEMARVMFDKMPLPA--K 278
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
++VT+ +I G+ ++G ++ A ++ ++M+ SG K + S++ +
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 304 XXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKL 362
NL + N L++ Y G + +AF + + ++NT+++ L
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV----SWNTMLHGLGVH 394
Query: 363 GHIQQAKELMKVMILQGFVPDYITYTILITS 393
GH ++A EL M +G PD +T+ ++ S
Sbjct: 395 GHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 121/245 (49%), Gaps = 13/245 (5%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
NVVT+ +II + G + A ++V +M ++ D+ ++ + G L++
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQM---VASGLKFDAAAVISILAACTESGLLSLGM 335
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
++ + + ++ N L+D Y++ +L++AF + +++ KK LV +NT++H L
Sbjct: 336 RIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVS----WNTMLHGL 391
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFK-FHSKILENNLIED 209
V G + L S M I PDK T+ + G ++E F+S +L+
Sbjct: 392 GVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQ 451
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGN-VENAVQVY 268
+ L++ L R L A +++ +M + P++V +G+L+ G C+ N V+ A +V
Sbjct: 452 VEHYGCLVDLLGRVGRLKEAIKVVQTMPME---PNVVIWGALL-GACRMHNEVDIAKEVL 507
Query: 269 EKMMK 273
+ ++K
Sbjct: 508 DNLVK 512
>AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5949006-5949644 REVERSE
Length = 212
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I+ LCK K EA ++F L G+ P+V T+NM+I + A L +++ + V
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMIRRGLV 77
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
PD+ITYN +I G CK KL A K + + T+ TLI+GY +A
Sbjct: 78 -------PDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNTLINGYCKATR 121
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+++ L EM ++G+V N + Y T+IH GD + MV N + T+
Sbjct: 122 VKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRD 181
Query: 181 LTKGLCRNGNVNEAFKF---HSKILENNL 206
+ LC + +A S ++ NN+
Sbjct: 182 ILPQLCSRKELRKAVAMLLQKSSMVSNNV 210
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 203 ENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVE 262
E+N+ D +NI+I+ LC++ A + ++ + GL PD+ T+ +I + ++
Sbjct: 7 ESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLG 62
Query: 263 NAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLIN 322
A ++Y +M++ G P+ + YNS+I+GLCK+ T+NTLIN
Sbjct: 63 RAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS--------TFNTLIN 114
Query: 323 GYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
GYC + ++ + M GI AN TY TLI+ ++G A ++ + M+ G
Sbjct: 115 GYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYS 174
Query: 383 DYITYTILITSFSKKCSPEEVIK 405
IT+ ++ CS +E+ K
Sbjct: 175 SSITFRDILPQL---CSRKELRK 194
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 32/217 (14%)
Query: 166 MVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNN 225
M ++ + D Y+I+ GLC+ G +EA + +L + L D ++N++I R ++
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 226 LSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNS 285
L A++L A M RGLVPD +T+ S+I G CK+ + A +V + +N+
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNT 111
Query: 286 VINGLCKEEXXXXXXXXXXXXXXMNLF----------DVITYNTLINGYCNSGKIDEAFA 335
+ING CK MNLF +VITY TLI+G+ G + A
Sbjct: 112 LINGYCK---------ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALD 162
Query: 336 FSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
M + G+ ++ T+ ++ LC +++A ++
Sbjct: 163 IFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 48/236 (20%)
Query: 59 EVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRA 118
+VM ++ D+ YN +I G CK GK A + ++ + P+V+TY +I R
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RF 58
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
SL A +L EM+++GLV +++ YN++IH
Sbjct: 59 SSLGRAEKLYAEMIRRGLVPDTITYNSMIH------------------------------ 88
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
GLC+ + +A K + + N LIN C++ + L MY
Sbjct: 89 -----GLCKQNKLAQARKVS---------KSCSTFNTLINGYCKATRVKDGMNLFCEMYR 134
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
RG+V +++T+ +LI G + G+ A+ ++++M+ +G + + + ++ LC +
Sbjct: 135 RGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRK 190
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 75/195 (38%), Gaps = 41/195 (21%)
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKE----------------------EXXXXXXXXXX 304
+++ M +S + YN +I+GLCK +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 305 XXXXMNLF----------DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNT 354
L+ D ITYN++I+G C K+ +A ++ + +T+NT
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNT 111
Query: 355 LINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKG 414
LIN CK ++ L M +G V + ITYT LI F + + + MV G
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 415 VIPHKQTYKAVVSPL 429
V T++ ++ L
Sbjct: 172 VYSSSITFRDILPQL 186
>AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6328519-6329970 REVERSE
Length = 483
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 109/225 (48%)
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
+ P Y LI GFC++G ++ + M+ + P++ Y +I G + EA+
Sbjct: 244 LDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAY 303
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
+ + KG + V+Y T+I +G + L M+ + P++F Y+++ G
Sbjct: 304 CIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGH 363
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
+ G ++ F++++L N S N +I C A ++ +M G+ P+
Sbjct: 364 FKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNA 423
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
+T+ +LI G CKE VE +++Y+++ G KP+ + Y +++ L
Sbjct: 424 ITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 152/373 (40%), Gaps = 14/373 (3%)
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS- 120
S Y P ++ N L G + A+ + + TL++ Y + S
Sbjct: 105 SNYDYTPGPVSLNILFGALLDGKAVKAAKSFLD-------TTGFKPEPTLLEQYVKCLSE 157
Query: 121 ---LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFT 177
+EEA + + + G+ + V N+V+ ++ L MV++ ++
Sbjct: 158 EGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI- 216
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
L + LC G+V+E ++ + L+ L + + LI+ C N + ++L +M
Sbjct: 217 -RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMI 275
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
P + + +I G C A +++ + G P+ V+Y ++I G C++
Sbjct: 276 AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLG 335
Query: 298 XXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
+ + YN +I+G+ G+I AF M G + NT+I
Sbjct: 336 SARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMI 395
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
C G +A E+ K M G P+ ITY LI F K+ E+ +KL+ + G+
Sbjct: 396 KGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLK 455
Query: 417 PHKQTYKAVVSPL 429
P Y A+V L
Sbjct: 456 PSGMAYAALVRNL 468
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 3/250 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I ALC + E + + LK G+ P + +I C++G +V + M
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEV---LHTMI 275
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
++ P Y +I G C K A + + +K P+ Y T+I G+ L
Sbjct: 276 AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLG 335
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
A +L EM+KKG+ N YN +IH + G++ V + M+ N + + +
Sbjct: 336 SARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMI 395
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
KG C +G +EAF+ + E + +A ++N LI C+ N + +L + GL
Sbjct: 396 KGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLK 455
Query: 243 PDIVTFGSLI 252
P + + +L+
Sbjct: 456 PSGMAYAALV 465
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 130/287 (45%), Gaps = 5/287 (1%)
Query: 7 LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSI 66
L +E + EA+ V+ GI +VVT N ++ K +D ++ +M V S +
Sbjct: 155 LSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEM-VESEF-- 211
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
DS CLI C G ++ +L + +++ + P YA LI G+ +
Sbjct: 212 --DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE 269
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLC 186
+ M+ + IY +I L + + ++ D PD+ Y+ + +G C
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFC 329
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
G + A K ++++ + + F++N++I+ + +S + M G ++
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTML 389
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
+ ++I G C G + A ++++ M ++G PN + YN++I G CKE
Sbjct: 390 SCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKE 436
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 102/250 (40%), Gaps = 3/250 (1%)
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
G + ++ ++ H +++E+ D+ LI LC ++S +LL +GL P
Sbjct: 189 GCLKARKLDRFWELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDP 246
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
+ LI G C+ GN +V M+ P++ +Y +I GLC +
Sbjct: 247 GQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIF 306
Query: 304 XXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKL 362
D + Y T+I G+C G + A F M G+ N YN +I+ K
Sbjct: 307 KNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKR 366
Query: 363 GHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
G I + M+ G+ ++ +I F +E ++ M GV P+ TY
Sbjct: 367 GEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITY 426
Query: 423 KAVVSPLLQE 432
A++ +E
Sbjct: 427 NALIKGFCKE 436
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 3/183 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I LC K LEA +F G P+ V + +I C+ G + A K+ +M
Sbjct: 289 IIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM---I 345
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
+RP+ YN +I G K G++++ E NEM+ + + T+I G+ +
Sbjct: 346 KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSD 405
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
EAF + M + G+ N++ YN +I E +E L + + P Y+ L
Sbjct: 406 EAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Query: 183 KGL 185
+ L
Sbjct: 466 RNL 468
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 1 NVVIYALCK--ECKLLEAMSVFYRS-LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSK 57
NV+I+ K E L+EA FY L++G +++ N +I C G D A ++
Sbjct: 357 NVMIHGHFKRGEISLVEA---FYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKN 413
Query: 58 MEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR 117
M S + P++ITYN LI GFCK K+ KL E+ + P+ YA L+
Sbjct: 414 M---SETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKM 470
Query: 118 ARSLEEAFRL 127
+ S+ + L
Sbjct: 471 SDSVATSLNL 480
>AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:24737719-24739353 FORWARD
Length = 544
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 155/382 (40%), Gaps = 39/382 (10%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
VF R G +V+T N +I + K DL ++ E I P+ IT
Sbjct: 183 GFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRI---YECAIDKRIYPNEITIRI 239
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
+I CK G+L L + + K +P+V +L+ FR+ +EM +
Sbjct: 240 MIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLV------------FRVLEEMRIE- 286
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
E +SLL ++ N + D YSI+ + G++ A
Sbjct: 287 ---------------------ESMSLLKRLLMKNMVV-DTIGYSIVVYAKAKEGDLVSAR 324
Query: 196 KFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGH 255
K ++L+ ++F + + + C ++ A++LL+ M G+ P TF LI G
Sbjct: 325 KVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGF 384
Query: 256 CKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DV 314
+ G E ++ E M+ G P+ +N ++ + K E D
Sbjct: 385 ARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDE 444
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
TY+ LI G+ ID+A + M+ ++ + +LI LC G ++ ++ +K+
Sbjct: 445 HTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKI 504
Query: 375 MILQGFVPDYITYTILITSFSK 396
M + P+ Y LI +F K
Sbjct: 505 MKKRLIEPNADIYDALIKAFQK 526
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/428 (19%), Positives = 183/428 (42%), Gaps = 52/428 (12%)
Query: 15 EAMSVFY-----RSLKHGIWPNVVTFNMIIDVACKMGAMDLALK-----------VVSKM 58
+A+S F+ R+L+HGI +T ++++ + A L V S +
Sbjct: 95 QALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDLVDSLL 154
Query: 59 EVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRA 118
+ + S P + ++ L+ + K+ L + + + + +V T TLI S++
Sbjct: 155 DTYEISSSTP--LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKS 212
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
+ + +R+ + + K + N + +I L EG ++ V L+ + R P
Sbjct: 213 KIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVN 272
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ L + + E+ ++L N++ D ++I++ + +L A+++ M
Sbjct: 273 TSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQ 332
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXX 298
RG + + + C++G+V+ A ++ +M +SG P Y+
Sbjct: 333 RGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSP----YDE------------- 375
Query: 299 XXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINF 358
T+N LI G+ G ++ + M G+ + + +N ++
Sbjct: 376 -----------------TFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKS 418
Query: 359 LCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
+ K+ ++ +A E++ I +GFVPD TY+ LI F + ++ +KL M + + P
Sbjct: 419 VSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPG 478
Query: 419 KQTYKAVV 426
+ +++++
Sbjct: 479 FEVFRSLI 486
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 116/272 (42%), Gaps = 38/272 (13%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++V+YA KE L+ A VF L+ G N + + + V C+ G + A +++S+ME
Sbjct: 308 SIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEE 367
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
V P T+NCLIGGF + G
Sbjct: 368 SGV---SPYDETFNCLIGGFARFG-----------------------------------W 389
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
E+ C+ M+ +GL+ + +N ++ + ++ + +++ +D PD+ TYS
Sbjct: 390 EEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSH 449
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L +G ++++A K ++ + LI LC + ++ L M R
Sbjct: 450 LIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRL 509
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMM 272
+ P+ + +LI K G+ NA +VY +M+
Sbjct: 510 IEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 11/296 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNV-VTFNMIIDVACKMG---AMDLALKVVS 56
++I LCKE +L E + + R P+V V +++ V +M +M L +++
Sbjct: 238 RIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLM 297
Query: 57 KMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYS 116
K V+ D+I Y+ ++ K G L A K+ +EM+++ N Y +
Sbjct: 298 KNMVV-------DTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCC 350
Query: 117 RARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKF 176
++EA RL EM + G+ +N +I G E MV + P
Sbjct: 351 EKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCS 410
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
++ + K + + NVN A + +K ++ + D +++ LI N++ A +L M
Sbjct: 411 AFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEM 470
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
R + P F SLI G C G VE + + M K +PN +Y+++I K
Sbjct: 471 EYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQK 526
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 170/377 (45%), Gaps = 12/377 (3%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
P+V +N+++ + D+A + +M + + PD TY+ LI F K G A
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRA---LAPDRYTYSTLITSFGKEGMFDSA 209
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
+M + + ++ Y+ LI+ R +A + + + G+ + V YN++I+
Sbjct: 210 LSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN- 268
Query: 150 LYVEGDM-EGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
+Y + + LLI M + + P+ +YS L N EA +++ E N
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D + NI+I+ + + + A +L S+ + P++V++ +++ + + A+ ++
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
Query: 269 EKMMKSGEKPNLVLYNSVIN--GLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCN 326
M + + N+V YN++I G E + + ITY+T+I+ +
Sbjct: 389 RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEP-NAITYSTIISIWGK 447
Query: 327 SGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYIT 386
+GK+D A ++++G+ + Y T+I ++G + AK L+ + L PD I
Sbjct: 448 AGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL----PDNIP 503
Query: 387 YTILITSFSKKCSPEEV 403
IT +K EE
Sbjct: 504 RETAITILAKAGRTEEA 520
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 186/452 (41%), Gaps = 40/452 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME- 59
NVV+ + + + A +F + + P+ T++ +I K G D AL + KME
Sbjct: 159 NVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQ 218
Query: 60 -------------------------VMSVYS------IRPDSITYNCLIGGFCKMGKLTM 88
+S++S I PD + YN +I + K
Sbjct: 219 DRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFRE 278
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A L EM E ++PN +Y+TL+ Y EA + EM + ++ N +I
Sbjct: 279 ARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMID 338
Query: 149 WLYVEGDM-EGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI 207
+Y + DM + L S+ I P+ +Y+ + + EA + ++
Sbjct: 339 -VYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIE 397
Query: 208 EDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQV 267
++ ++N +I ++ A L+ M RG+ P+ +T+ ++I K G ++ A +
Sbjct: 398 QNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 457
Query: 268 YEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNS 327
++K+ SG + + VLY ++I E + L D I T I +
Sbjct: 458 FQKLRSSGVEIDQVLYQTMI---VAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKA 514
Query: 328 GKIDEA-FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYIT 386
G+ +EA + F A + +G + + + +IN + E+ + M G+ PD
Sbjct: 515 GRTEEATWVFRQAFE-SGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNV 573
Query: 387 YTILITSFSKKCSPEEVIKLHDYMVLKG-VIP 417
+++ ++ K+ E+ ++ M +G V P
Sbjct: 574 IAMVLNAYGKQREFEKADTVYREMQEEGCVFP 605
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 147/330 (44%), Gaps = 1/330 (0%)
Query: 98 EKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME 157
E P+V Y ++ RA+ + A L DEM ++ L + Y+T+I EG +
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 158 GVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILI 217
+ M +R+ D YS L + R + ++A S++ + + D ++N +I
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 218 NYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEK 277
N ++ A+ L+ M G++P+ V++ +L+ + + A+ V+ +M +
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 278 PNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAF 336
+L N +I+ + + M++ +V++YNT++ Y + EA
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 337 SFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
M+ I N TYNT+I K ++A L++ M +G P+ ITY+ +I+ + K
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGK 447
Query: 397 KCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
+ L + GV + Y+ ++
Sbjct: 448 AGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 144/331 (43%), Gaps = 5/331 (1%)
Query: 99 KDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVI-YNTVIHWLYVEGDME 157
KD ++R +L+ SR + + L D + ++ SV YN V+ + +
Sbjct: 116 KDRQLSIRFMVSLL---SRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFD 172
Query: 158 GVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILI 217
L M + PD++TYS L + G + A + K+ ++ + D ++ LI
Sbjct: 173 IAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLI 232
Query: 218 NYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEK 277
R + S A + + + G+ PD+V + S+I+ + K A + ++M ++G
Sbjct: 233 ELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVL 292
Query: 278 PNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN-LFDVITYNTLINGYCNSGKIDEAFAF 336
PN V Y+++++ + +N D+ T N +I+ Y + EA
Sbjct: 293 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
Query: 337 SFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
++++ I N +YNT++ + +A L ++M + + +TY +I + K
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 397 KCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
E+ L M +G+ P+ TY ++S
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIIS 443
>AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:644458-648421 REVERSE
Length = 852
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 159/357 (44%), Gaps = 26/357 (7%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVM-SVYSIRPDSITYNCLIGGFCKMGKLTMA 89
++ ++N+++ C G +DLA + + + M S ++ D+ TY +I F A
Sbjct: 334 DMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWA 393
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
K+K++M + PN T+++LI + A +E+A L +EM+ G NS +N ++H
Sbjct: 394 LKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHA 453
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN---- 205
+ L S + + + I++KG + N+ + S + N+
Sbjct: 454 CVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPY 513
Query: 206 --------LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK 257
++NIL+ C ++ G K+L+ M GL P+ +T+ +LID
Sbjct: 514 IQASKRFCFKPTTATYNILLK-ACGTDYYRG-KELMDEMKSLGLSPNQITWSTLIDMCGG 571
Query: 258 EGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDV--- 314
G+VE AV++ M +G +P++V Y + I +C E M + +
Sbjct: 572 SGDVEGAVRILRTMHSAGTRPDVVAYTTAIK-ICAEN--KCLKLAFSLFEEMRRYQIKPN 628
Query: 315 -ITYNTLINGYCNSG---KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQ 367
+TYNTL+ G ++ + A M+NAG N LI C+ G IQ+
Sbjct: 629 WVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCE-GVIQE 684
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 177/377 (46%), Gaps = 47/377 (12%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY---SRARSLEEAF 125
+++T+N +I G+ K ++ A KL + M ++D+V T+ T+I GY R LEEA
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV----TWNTMISGYVSCGGIRFLEEAR 125
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
+L DEM + +S +NT+I Y + G +LL+ + R + ++S + G
Sbjct: 126 KLFDEMPSR----DSFSWNTMIS-GYAKNRRIGEALLLFEKMPER---NAVSWSAMITGF 177
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM--YVRGLVP 243
C+NG V+ A K+ ++D+ L+ L ++ LS A +L V G
Sbjct: 178 CQNGEVDSAVVLFRKM----PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRED 233
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMK------SGEK-----PNLVLYNSVINGLCK 292
+ + +LI G+ + G VE A +++++ GE N+V +NS+I K
Sbjct: 234 LVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLK 293
Query: 293 EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
M D I++NT+I+GY + ++++AFA M N + ++
Sbjct: 294 ---VGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN----RDAHSW 346
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPD--YITYTILITSFSKKCSPEEVIKLHDYM 410
N +++ +G+++ A+ + P+ +++ +I ++ K +E + L M
Sbjct: 347 NMMVSGYASVGNVELARHYFEK------TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRM 400
Query: 411 VLKGVIPHKQTYKAVVS 427
++G P T +++S
Sbjct: 401 NIEGEKPDPHTLTSLLS 417
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 198/471 (42%), Gaps = 70/471 (14%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I K ++ EA+ +F + + N V+++ +I C+ G +D A+ + KM V
Sbjct: 140 NTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPV 195
Query: 61 M-----------------------------SVYSIRPDSI-TYNCLIGGFCKMGKLTMAE 90
S+ S R D + YN LI G+ + G++ A
Sbjct: 196 KDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAAR 255
Query: 91 KLKNEM-----------MEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMN 139
L +++ + NV ++ ++I Y + + A L D+M + +
Sbjct: 256 CLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----D 311
Query: 140 SVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHS 199
++ +NT+I ME L S M NR D +++++ G GNV A +
Sbjct: 312 TISWNTMIDGYVHVSRMEDAFALFSEM-PNR---DAHSWNMMVSGYASVGNVELARHYFE 367
Query: 200 KILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEG 259
K E + + S N +I ++ + A L M + G PD T SL+
Sbjct: 368 KTPEKHTV----SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLV 423
Query: 260 NVENAVQVYEKMMKSGEKPNLVLYNSVIN--GLCKEEXXXXXXXXXXXXXXMNL-FDVIT 316
N+ +Q+++ ++K+ P++ ++N++I C E M L +VIT
Sbjct: 424 NLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGE-----IMESRRIFDEMKLKREVIT 477
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK-ELMKVM 375
+N +I GY G EA +MK+ GI +H T+ +++N G + +AK + + +M
Sbjct: 478 WNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMM 537
Query: 376 ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
+ P Y+ L+ S + EE + + M + P K + A++
Sbjct: 538 SVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFE---PDKTVWGALL 585
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 171/423 (40%), Gaps = 82/423 (19%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMG-------------- 46
N +I L + + ++ F L+ G+ P+ +TF ++ K+G
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 47 ------------AMDLALKVVSKMEVMSVYSIRPDSIT------YNCLIGGFCKMGKLTM 88
+D+ K V+ PD I +N LI G+C+ + M
Sbjct: 155 NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHM 214
Query: 89 AEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
A L M E+ N +++TLI GY + L A +L + M +K N V + T+I+
Sbjct: 215 ATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMPEK----NVVSWTTLIN 266
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
GD E M++ + P+++T + + ++G + + H IL+N +
Sbjct: 267 GFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKL 326
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D L++ + L A + ++M + DI+++ ++I G G A+Q +
Sbjct: 327 DRAIGTALVDMYAKCGELDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQCF 382
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG 328
+MM SGEKP+ V++ +V+ C NS
Sbjct: 383 RQMMYSGEKPDEVVFLAVLTA-C---------------------------------LNSS 408
Query: 329 KIDEAFAFSFAMK-NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
++D F +M+ + I Y +++ L + G + +A EL++ M + PD T+
Sbjct: 409 EVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPIN---PDLTTW 465
Query: 388 TIL 390
L
Sbjct: 466 AAL 468
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 116/255 (45%), Gaps = 15/255 (5%)
Query: 165 SMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSN 224
S+ N + F + L +GL N + + +L + D + ++ +SN
Sbjct: 81 SIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPD----RLTFPFVLKSN 136
Query: 225 NLSGAKQLLASMYVRGL--VPDIVTFG--SLIDGHCKEGNVENAVQVYEKMMKSGEKPNL 280
+ G + L +++ L D +F SL+D + K G +++A QV+E+ +K ++
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 281 VLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAM 340
+++N +ING C+ + N +++TLI GY +SG+++ A M
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSMPERN---SGSWSTLIKGYVDSGELNRAKQLFELM 253
Query: 341 KNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSP 400
+ ++ TLIN + G + A M+ +G P+ T ++++ SK +
Sbjct: 254 PEKNV----VSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGAL 309
Query: 401 EEVIKLHDYMVLKGV 415
I++H Y++ G+
Sbjct: 310 GSGIRIHGYILDNGI 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 7/258 (2%)
Query: 139 NSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFH 198
N + N +I L E M+ + PD+ T+ + K + G H
Sbjct: 90 NPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALH 149
Query: 199 SKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
+ L+N + D+F L++ ++ L A Q+ R I+ + LI+G+C+
Sbjct: 150 AATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRA 209
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYN 318
++ A ++ M + N ++++I G N V+++
Sbjct: 210 KDMHMATTLFRSM----PERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKN---VVSWT 262
Query: 319 TLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
TLING+ +G + A + F M G+ N T +++ K G + + ++
Sbjct: 263 TLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN 322
Query: 379 GFVPDYITYTILITSFSK 396
G D T L+ ++K
Sbjct: 323 GIKLDRAIGTALVDMYAK 340
>AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:493683-495158 FORWARD
Length = 491
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 135/286 (47%), Gaps = 7/286 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ LC+E + +A +V Y SLKH P++ TFN++ + + + + E
Sbjct: 184 NALLRTLCQEKSMTDARNV-YHSLKHQFQPDLQTFNIL------LSGWKSSEEAEAFFEE 236
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M ++PD +TYN LI +CK ++ A KL ++M E++ P+V TY T+I G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++A + EM + G + YN I + + L+ MV + P+ TY++
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ L ++ +++ + ++L N + + S LI R + A +L M V+G
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSV 286
+ L+D C VE A + +M++ G +P+ V + +
Sbjct: 417 FGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 22/256 (8%)
Query: 170 RIPPDKFT---YSILTKGLCRNGNVNEAFK-FHSKILENNLIEDAFSHNILINYLCRSNN 225
R+ PD F ++ L + LC+ ++ +A +HS L++ D + NIL
Sbjct: 172 RLVPDFFDTACFNALLRTLCQEKSMTDARNVYHS--LKHQFQPDLQTFNIL--------- 220
Query: 226 LSGAKQLLAS------MYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPN 279
LSG K + M +GL PD+VT+ SLID +CK+ +E A ++ +KM + E P+
Sbjct: 221 LSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPD 280
Query: 280 LVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSF 338
++ Y +VI GL + DV YN I +C + ++ +A
Sbjct: 281 VITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVD 340
Query: 339 AMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKC 398
M G++ N TYN L + ++ EL M+ +P+ + LI F +
Sbjct: 341 EMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHE 400
Query: 399 SPEEVIKLHDYMVLKG 414
+ ++L + MV+KG
Sbjct: 401 KVDMAMRLWEDMVVKG 416
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 131/278 (47%), Gaps = 12/278 (4%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPN---VVTFNMIIDVACKMGAMDLALKVVSK 57
VV+ + K C + + + F++ + + P+ FN ++ C+ +M A V
Sbjct: 148 QVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFDTACFNALLRTLCQEKSMTDARNVYHS 205
Query: 58 MEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR 117
++ + +PD T+N L+ G+ AE EM K + P+V TY +LID Y +
Sbjct: 206 LK----HQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCK 258
Query: 118 ARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFT 177
R +E+A++L D+M ++ + + Y TVI L + G + ++ M + PD
Sbjct: 259 DREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 318
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
Y+ + C + +A K ++++ L +A ++N+ L +N+L + +L M
Sbjct: 319 YNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRML 378
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
+P+ + LI + V+ A++++E M+ G
Sbjct: 379 GNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 7/207 (3%)
Query: 220 LCRSNNLSGAKQLLASMY-VRGLVPDIVT---FGSLIDGHCKEGNVENAVQVYEKMMKSG 275
L R L +Q + S + + LVPD F +L+ C+E ++ +A VY + K
Sbjct: 151 LGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSL-KHQ 209
Query: 276 EKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFA 335
+P+L +N +++G E DV+TYN+LI+ YC +I++A+
Sbjct: 210 FQPDLQTFNILLSGWKSSEEAEAFFEEMKGKGLKP--DVVTYNSLIDVYCKDREIEKAYK 267
Query: 336 FSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFS 395
M+ + TY T+I L +G +A+E++K M G PD Y I +F
Sbjct: 268 LIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFC 327
Query: 396 KKCSPEEVIKLHDYMVLKGVIPHKQTY 422
+ KL D MV KG+ P+ TY
Sbjct: 328 IARRLGDADKLVDEMVKKGLSPNATTY 354
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 283 YNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKN 342
+N+++ LC+E+ D+ T+N L++G+ +EA AF MK
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKG 239
Query: 343 AGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEE 402
G+ + TYN+LI+ CK I++A +L+ M + PD ITYT +I P++
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 403 VIKLHDYMVLKGVIPHKQTYKAVV 426
++ M G P Y A +
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAI 323
>AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);
binding | chr1:3363535-3366276 FORWARD
Length = 913
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 185/420 (44%), Gaps = 19/420 (4%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHG-IWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
N +I A+ + + E++S+F K I PNVV++N II+ C G +D AL+V
Sbjct: 184 NAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVY--RH 241
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+++ P S+TY L G + G++ A L EM+ K + Y LI GY
Sbjct: 242 ILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLG 301
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRI---PPDKF 176
++A DE+ K V + ++ T + + + +G+ + S++D + PP
Sbjct: 302 DFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPP--- 358
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHN-----ILINYLCRSNNLSGA-- 229
T ++L + + G +EA+ +++L+N+ + S N I++N + S A
Sbjct: 359 TGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAIN 418
Query: 230 --KQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI 287
K++ + + + V D + + +++ C++G + A + + + + + + ++I
Sbjct: 419 TFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMI 478
Query: 288 NGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYC-NSGKIDEAFAFSFAMKNAGIA 346
+ K E +NL V + + G +GK+ E+ M
Sbjct: 479 DAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPK 538
Query: 347 ANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKL 406
+ + Y+ ++ LC + QAK+++ MI + +I F K EE+ K+
Sbjct: 539 PDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAGRREEIEKI 598
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 3/239 (1%)
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG-L 241
+ L R +++ A K + + +N F+ N +I + R+ S + L + + +
Sbjct: 153 QSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNI 212
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE-KPNLVLYNSVINGLCKE-EXXXXX 299
VP++V++ +I+ HC EGNV+ A++VY ++ + P+ V Y + GL +
Sbjct: 213 VPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAA 272
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
D YN LI GY + G D+A F +K+ + T + +
Sbjct: 273 SLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYW 332
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
+ G+ ++A E + ++ + F T +L+ F K +E L + M+ P+
Sbjct: 333 FEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPN 391
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 128/330 (38%), Gaps = 57/330 (17%)
Query: 82 KMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG-LVMNS 140
+ L A KL + + + P V T +I RA+ E+ L K+ +V N
Sbjct: 157 RASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNV 216
Query: 141 VIYNTVIHWLYVEGDM-EGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHS 199
V YN +I+ EG++ E + + + + P TY LTKGL + G + +A
Sbjct: 217 VSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAAS--- 273
Query: 200 KILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEG 259
LL M +G D + +LI G+ G
Sbjct: 274 --------------------------------LLREMLSKGQAADSTVYNNLIRGYLDLG 301
Query: 260 NVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD------ 313
+ + AV+ ++++ K +Y+ ++N E +L D
Sbjct: 302 DFDKAVEFFDEL-----KSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMH 356
Query: 314 VITYNTLINGYCNSGKIDEAFA-FSFAMKNAG----IAANHATYNTLINFLCKLGHIQQA 368
T N L+ + GK DEA+A F+ + N ++ N T ++N K+G +A
Sbjct: 357 PPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEA 416
Query: 369 ----KELMKVMILQGFVPDYITYTILITSF 394
K++ + + FV DY+ Y ++T F
Sbjct: 417 INTFKKVGSKVTSKPFVMDYLGYCNIVTRF 446
>AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:566271-569865 FORWARD
Length = 1077
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 145/350 (41%), Gaps = 48/350 (13%)
Query: 74 NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK 133
N LI F K+GK A + ++ E PN +TY ++ + ++ A +C++M+K
Sbjct: 736 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 795
Query: 134 KGLVMNSVIYNTVIHWLYVEGDMEGVSLL--ISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
G++ +I W EG E + ++ + +PP +F +++T LC+N
Sbjct: 796 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPP-RFVATLIT-ALCKNDGT 853
Query: 192 NEAFKFHSKILENNLIEDAFSHNI-----LINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
F ++L +L +A I +I+ LCR N+ AK LL M +G P
Sbjct: 854 ---ITFAQEML-GDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNA 909
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXX 306
F ++ K G+++ A +V + M G KP
Sbjct: 910 VFNLVVHACSKTGDLDEAKEVLKLMESRGLKP---------------------------- 941
Query: 307 XXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
DV TY +I+GY G +DEA K + TY+ LI CK+
Sbjct: 942 ------DVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYD 995
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFS-KKCSPEEVIKLHDYMVLKGV 415
+A +L+ M G P+ Y LI SF K E+ L + M KG+
Sbjct: 996 EALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 1045
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 43/328 (13%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
N +I K K A VF ++ + G PN T+ + ++ CK MD A V KM
Sbjct: 736 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 795
Query: 59 ------------------------EVMSVY--------SIRPDSITYNCLIGGFCKM-GK 85
E SVY S+ P + LI CK G
Sbjct: 796 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGT 853
Query: 86 LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNT 145
+T A+++ ++ + ++ ++ +I R R++++A L +M+ KG + ++N
Sbjct: 854 ITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNL 913
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
V+H GD++ ++ M + PD +TY+++ G + G ++EA + ++ + +
Sbjct: 914 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH 973
Query: 206 LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHC-KEGNVENA 264
+++ LI C+ A +LL M G+ P+ + LI C K + E A
Sbjct: 974 KKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKA 1033
Query: 265 VQVYEKMMKSGEKPNLVLYNSVINGLCK 292
++E+M + G + N++ GL +
Sbjct: 1034 EVLFEEMKQKG-----LHLNAISQGLIR 1056
>AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16091120-16092454 FORWARD
Length = 444
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 172/368 (46%), Gaps = 40/368 (10%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVAC-KMGAMDLALKVVSKMEVMSVYSIRPDS 70
++ EA+ VF++ P+ T N ++ V K +++L +++ K M V R +
Sbjct: 114 RIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGV---RLEE 170
Query: 71 ITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR--SLEEAFRLC 128
T+ LI C++G++ A +L M + ++ + R Y+ L+ + + S +
Sbjct: 171 STFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYL 230
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
+++ K Y V+ +L G + V +++ M +R+ PD Y+I+ +G+ +
Sbjct: 231 EDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIAD 290
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
+ +A K ++L L D +++N+ IN LC+ N++ GA ++++SM G P++VT+
Sbjct: 291 EDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTY 350
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
LI K G++ A ++++M +G N ++ +I+
Sbjct: 351 NILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISA------------------- 391
Query: 309 MNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
Y + C G ++EAF + +K++ I +I+ LC+ G + QA
Sbjct: 392 --------YIEVDEVVCAHGLLEEAFNMNVFVKSSRI-------EEVISRLCEKGLMDQA 436
Query: 369 KELMKVMI 376
EL+ ++
Sbjct: 437 VELLAHLV 444
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 11/228 (4%)
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSG----- 228
++ T+ IL LCR G V+ A + + ++++I D ++ L++ +C+ + S
Sbjct: 169 EESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIG 228
Query: 229 -AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI 287
+ L + + GL V L++G G + V V +M +P+LV Y V+
Sbjct: 229 YLEDLRKTRFSPGLRDYTVVMRFLVEG----GRGKEVVSVLNQMKCDRVEPDLVCYTIVL 284
Query: 288 NG-LCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIA 346
G + E+ DV TYN ING C I+ A +M G
Sbjct: 285 QGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSE 344
Query: 347 ANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
N TYN LI L K G + +AK L K M G + T+ I+I+++
Sbjct: 345 PNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 392
>AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: EMB2745 (EMBRYO
DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 13180 Blast hits
to 4377 proteins in 153 species: Archae - 4; Bacteria -
12; Metazoa - 210; Fungi - 191; Plants - 12251; Viruses
- 0; Other Eukaryotes - 512 (source: NCBI BLink). |
chr1:29087145-29088521 FORWARD
Length = 458
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 13/218 (5%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
EA++ FYR ++ P+V +N II+ C++G A ++ +M+ + + PD+ TY
Sbjct: 183 EALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQ-LPGFRYPPDTYTYT 241
Query: 75 CLIGGFCKMG-----------KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEE 123
LI +C+ G ++ A ++ EM+ + VP+V TY LIDG + +
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 124 AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVD-NRIPPDKFTYSILT 182
A L ++M KG V N V YN+ I + V ++EG ++ +M P TY+ L
Sbjct: 302 ALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLI 361
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYL 220
L EA +++E L+ +++ ++ + L
Sbjct: 362 HALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 112/272 (41%), Gaps = 48/272 (17%)
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ L K L G V EA ++ E + D +++N +IN LCR N A+ LL M +
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 239 RGL--VPDIVTFGSLIDGHCKEG-----------NVENAVQVYEKMMKSGEKPNLVLYNS 285
G PD T+ LI +C+ G + A +++ +M+ G P++V YN
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 286 VINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGI 345
+I+G CK + +I A MK G
Sbjct: 289 LIDGCCK----------------------------------TNRIGRALELFEDMKTKGC 314
Query: 346 AANHATYNTLINFLCKLGHIQQAKELMKVMILQGF-VPDYITYTILITSFSKKCSPEEVI 404
N TYN+ I + I+ A E+M+ M G VP TYT LI + + E
Sbjct: 315 VPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEAR 374
Query: 405 KLHDYMVLKGVIPHKQTYKAVVSPLLQEGVET 436
L MV G++P + TYK V L EG+ +
Sbjct: 375 DLVVEMVEAGLVPREYTYKLVCDALSSEGLAS 406
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 50/238 (21%)
Query: 173 PDKFTYSILTKGLCRNGNVNEAFKF---HSKILENNLIEDAFSHNILINYLCRSNNLSG- 228
PD + Y+ + LCR GN +A +F ++ D +++ ILI+ CR +G
Sbjct: 198 PDVYAYNTIINALCRVGNFKKA-RFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 229 ----------AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKP 278
A ++ M RG VPD+VT+ LIDG CK + A++++E M G P
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 279 NLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSF 338
N V TYN+ I Y + +I+ A
Sbjct: 317 NQV----------------------------------TYNSFIRYYSVTNEIEGAIEMMR 342
Query: 339 AMKNAGIA-ANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFS 395
MK G +TY LI+ L + +A++L+ M+ G VP TY ++ + S
Sbjct: 343 TMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALS 400
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 98/235 (41%), Gaps = 22/235 (9%)
Query: 220 LCRSNNLSGAKQLLASMYVRGLVPDIVTFGS---LIDGHCKEGNVENAVQVYEKMMKSGE 276
L + N+ G L + R ++VT S L+ +EG V+ A+ + +M +
Sbjct: 137 LAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHC 196
Query: 277 KPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF---DVITYNTLINGYCNSG----- 328
KP++ YN++IN LC+ D TY LI+ YC G
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 329 ------KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
++ EA M G + TYN LI+ CK I +A EL + M +G VP
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 383 DYITYTILITSFSKKCSPEEVIKLHDYMVLKG-VIPHKQTYKAVVSPLLQEGVET 436
+ +TY I +S E I++ M G +P TY +PL+ VET
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTY----TPLIHALVET 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 101/277 (36%), Gaps = 49/277 (17%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
NVVT I + +G + ++ M Y +PD YN +I C++G A
Sbjct: 161 NVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKAR 220
Query: 91 KLKNEMMEKDI--VPNVRTYATLIDGYSR-----------ARSLEEAFRLCDEMMKKGLV 137
L ++M P+ TY LI Y R R + EA R+ EM+ +G V
Sbjct: 221 FLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFV 280
Query: 138 MNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKF 197
+ V YN +I G C+ + A +
Sbjct: 281 PDVVTYNCLI-----------------------------------DGCCKTNRIGRALEL 305
Query: 198 HSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL-VPDIVTFGSLIDGHC 256
+ + + ++N I Y +N + GA +++ +M G VP T+ LI
Sbjct: 306 FEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALV 365
Query: 257 KEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
+ A + +M+++G P Y V + L E
Sbjct: 366 ETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSE 402
>AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23488884-23489530 REVERSE
Length = 189
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
E FR EM ++GLV N+V Y T+I L+ GD + + MV + +PPD TY+IL
Sbjct: 2 ELFR---EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILL 58
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
GLC+NG + +A L +ED + L S+ ++G+
Sbjct: 59 DGLCKNGKLEKA-------LVAGKVEDGW-------------------DLFCSLSLKGVK 92
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
P++VT+ ++I G CK+G E A ++ KM + G P+ YN++I ++
Sbjct: 93 PNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 152
Query: 303 XXXXXXMNLF-DVITYNTLINGYCNSGKIDEAF 334
D TY L+ + G++D+ F
Sbjct: 153 IKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGF 184
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
+L M RGLV + VT+ +LI G + G+ + A +++++M+ G P+++ YN +++GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 291 CKEEXXXXXXXXXXXXXXMNLF----------DVITYNTLINGYCNSGKIDEAFAFSFAM 340
CK +LF +V+TY T+I+G+C G +EA+ M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 341 KNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
K G + TYNTLI + G + EL+K M F D TY ++
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 17 MSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCL 76
M +F + G+ N VT+ +I + G D+A ++ +M + PD +TYN L
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEM---VSDGVPPDIMTYNIL 57
Query: 77 IGGFCKMGKLT---MAEKLKN------EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRL 127
+ G CK GKL +A K+++ + K + PNV TY T+I G+ + EEA+ L
Sbjct: 58 LDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTL 117
Query: 128 CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR 187
+M + G + +S YNT+I +GD + LI M R D TY ++T +
Sbjct: 118 FRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLH 176
Query: 188 NGNVNEAF 195
+G +++ F
Sbjct: 177 DGRLDKGF 184
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
+ +TY TLI G +G D A M + G+ + TYN L++ LCK G +++A
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAG 74
Query: 373 KV---------MILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYK 423
KV + L+G P+ +TYT +I+ F KK EE L M G +P TY
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 424 AVVSPLLQEG 433
++ L++G
Sbjct: 135 TLIRAHLRDG 144
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKME-------VMSVYSIRP 68
A +F + G+ P+++T+N+++D CK G ++ AL V K+E +S+ ++P
Sbjct: 35 AQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKP 93
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
+ +TY +I GFCK G A L +M E +P+ TY TLI + R + L
Sbjct: 94 NVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 153
Query: 129 DEMMKKGLVMNSVIYNTVIHWLY 151
EM ++ Y V L+
Sbjct: 154 KEMRSCRFAGDASTYGLVTDMLH 176
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 203 ENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVE 262
+ L+ + ++ LI L ++ + A+++ M G+ PDI+T+ L+DG CK G +E
Sbjct: 9 QRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLE 68
Query: 263 NAV---------QVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN-LF 312
A+ ++ + G KPN+V Y ++I+G CK+ L
Sbjct: 69 KALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLP 128
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
D TYNTLI + G + M++ A + +TY + + L
Sbjct: 129 DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 9/169 (5%)
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR--- 117
MS + +++TY LI G + G MA+++ EM+ + P++ TY L+DG +
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 118 ------ARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRI 171
A +E+ + L + KG+ N V Y T+I +G E L M ++
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 172 PPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYL 220
PD TY+ L + R+G+ + + ++ DA ++ ++ + L
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 340 MKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCS 399
M G+ N TY TLI L + G A+E+ K M+ G PD +TY IL+ K
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 400 PEEVI---KLHD------YMVLKGVIPHKQTYKAVVSPLLQEG 433
E+ + K+ D + LKGV P+ TY ++S ++G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKG 109
>AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26838850-26841489 REVERSE
Length = 879
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 138/361 (38%), Gaps = 39/361 (10%)
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
++T++ L+ FCK GKL AE ++ D L+D R +EA +L D
Sbjct: 251 AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLD 310
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
E+ G V YN I + L + G
Sbjct: 311 EIKLVGTVNMDRAYN-----------------------------------IWIRALIKAG 335
Query: 190 NVNEAFKFHSKI--LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
+N F KI LE +E F +N ++ L + NNL G +L M VRG+ P+ T
Sbjct: 336 FLNNPADFLQKISPLEGCELE-VFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKT 394
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXX 307
+ + CK G V+ A+++Y + G P + YN +I+ LC E
Sbjct: 395 MNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAI 454
Query: 308 XMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
F T++TL N C GK D A A + +I+ LC +G ++
Sbjct: 455 DRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVE 514
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
A + ++ G + +T LI + KL M KG P + Y+ V+
Sbjct: 515 DALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVI 574
Query: 427 S 427
Sbjct: 575 Q 575
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 138/332 (41%), Gaps = 3/332 (0%)
Query: 104 NVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLI 163
++R L+ GY+ A + A + M +GL ++S Y+ +++ L E + ++
Sbjct: 181 SLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIF 240
Query: 164 SSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRS 223
+ R T+SIL K C+ G ++EA + +L N+ IL++ LC
Sbjct: 241 DQ-ISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSK 299
Query: 224 NNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK-SGEKPNLVL 282
A +LL + + G V + I K G + N +K+ G + +
Sbjct: 300 RKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFR 359
Query: 283 YNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMK 341
YNS++ L KE + + T N + +C +G +DEA +
Sbjct: 360 YNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRS 419
Query: 342 NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPE 401
G A +YN LI+ LC ++QA +++K I +G T++ L + K P+
Sbjct: 420 EIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPD 479
Query: 402 EVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+L + ++P + ++S L G
Sbjct: 480 MARELVIAAAERDLLPKRIAGCKIISALCDVG 511
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 164/433 (37%), Gaps = 5/433 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+++ ALC + K EA + G +N+ I K G ++ + K+ +
Sbjct: 291 ILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPL 350
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
+ + YN ++ K L + EMM + + PN +T + + +A +
Sbjct: 351 EGCEL--EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFV 408
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+EA L + G ++ YN +IH L +E ++ +D T+S L
Sbjct: 409 DEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTL 468
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
T LC G + A + E +L+ + +I+ LC + A + G+
Sbjct: 469 TNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGV 528
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
F SLI G + A ++ +M + G P LY +VI +C+ E
Sbjct: 529 DTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFF 588
Query: 302 XXXXXXXMNLFD--VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
++L++ V YN I G +GK A M GI A+ ++
Sbjct: 589 TTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSY 648
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
K I A + QG + Y ++I K ++ + + M +G+ P
Sbjct: 649 LKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSI 707
Query: 420 QTYKAVVSPLLQE 432
+ Y+ + L E
Sbjct: 708 ECYEVNIQKLCNE 720
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/433 (20%), Positives = 172/433 (39%), Gaps = 56/433 (12%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I+ LC + +A V ++ G + TF+ + + C G D+A ++V
Sbjct: 431 NYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVI---A 487
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIV-PNVRTYATLIDGYSRAR 119
+ + P I +I C +GK+ A + NE+ K V + + + +LI G
Sbjct: 488 AAERDLLPKRIAGCKIISALCDVGKVEDALMI-NELFNKSGVDTSFKMFTSLIYGSITLM 546
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIH-----------------------W------- 149
+ A +L M +KG +Y VI W
Sbjct: 547 RGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAY 606
Query: 150 -LYVEG----DMEGVSLLISSMVD-NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILE 203
L++EG ++ L+ M+D + I P + ++ + +N + +A F + E
Sbjct: 607 NLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLRE 666
Query: 204 NNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVEN 263
+ + ++I LC++N L A L M GL P I + I C E +
Sbjct: 667 QGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDE 725
Query: 264 AVQVYEKMMKSGEK-----PNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVIT-Y 317
AV + + KSG + N++L+N++ + E +L ++I +
Sbjct: 726 AVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKSLGELIGLF 785
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
+ I+ ++DE + + + TYN L+ + + + A E+++ +
Sbjct: 786 SGRIDMEVELKRLDEVIEKCYPL-------DMYTYNMLLRMIV-MNQAEDAYEMVERIAR 837
Query: 378 QGFVPDYITYTIL 390
+G+VP+ T IL
Sbjct: 838 RGYVPNERTDMIL 850
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 167/424 (39%), Gaps = 26/424 (6%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N + CK + EA+ ++ + G P +++N +I C +++ A V+ K +
Sbjct: 396 NAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVL-KGAI 454
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ + T++ L C GK MA +L E+D++P +I
Sbjct: 455 DRGHFL--GGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGK 512
Query: 121 LEEAFRLCDEMMKKGL-----VMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
+E+A + + K G+ + S+IY ++ + GD+ + LI M + P +
Sbjct: 513 VEDALMINELFNKSGVDTSFKMFTSLIYGSIT---LMRGDI--AAKLIIRMQEKGYTPTR 567
Query: 176 FTYSILTKGLCRNGNVNEAF-----KFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
Y + + +C + + F KF + E+ + ++N+ I + A+
Sbjct: 568 SLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQ----AYNLFIEGAGFAGKPKLAR 623
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
+ M G+ P + + ++ + K + +A+ + + + G K LY +I GL
Sbjct: 624 LVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGL 682
Query: 291 CKEEXXXXXXXXXXXXXXMNLFDVIT-YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
CK L I Y I CN K DEA + +G
Sbjct: 683 CKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITA 742
Query: 350 ATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDY 409
N L++ K + +A M+ ++ +P+ + LI FS + E +K D
Sbjct: 743 FIGNVLLHNAMKSKGVYEAWTRMRN--IEDKIPEMKSLGELIGLFSGRIDMEVELKRLDE 800
Query: 410 MVLK 413
++ K
Sbjct: 801 VIEK 804
>AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885), Smr protein/MutS2 C-terminal
(InterPro:IPR002625); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46580.1); Has 19821 Blast hits to 5782
proteins in 183 species: Archae - 2; Bacteria - 24;
Metazoa - 276; Fungi - 350; Plants - 18437; Viruses - 0;
Other Eukaryotes - 732 (source: NCBI BLink). |
chr4:9257985-9260093 FORWARD
Length = 702
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 130/308 (42%), Gaps = 2/308 (0%)
Query: 115 YSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPD 174
+ +++ LE++ +L DEM+++G+ ++ + T+I G + M PD
Sbjct: 185 FRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPD 244
Query: 175 KFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLA 234
T + + R GNV+ A + + DA + + LI S N G +
Sbjct: 245 NVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYE 304
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
M G+ P++V + LID + A +Y+ ++ +G PN Y +++ +
Sbjct: 305 EMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRAR 364
Query: 295 XXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIA-ANHATY 352
L VI YNTL++ ++ +DEAF MKN + T+
Sbjct: 365 YGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTF 424
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVL 412
++LI G + +A+ + M GF P T +I + K ++V++ D ++
Sbjct: 425 SSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLE 484
Query: 413 KGVIPHKQ 420
G+ P +
Sbjct: 485 LGITPDDR 492
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 7/219 (3%)
Query: 204 NNLIE------DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK 257
NNL+E + +N+ + +S +L +++L M RG+ PD TF ++I +
Sbjct: 163 NNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQ 222
Query: 258 EGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVIT 316
G + AV+ +EKM G +P+ V ++I+ + D +T
Sbjct: 223 NGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVT 282
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
++TLI Y SG D MK G+ N YN LI+ + + QAK + K +I
Sbjct: 283 FSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLI 342
Query: 377 LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
GF P++ TY L+ ++ + ++ + ++ M KG+
Sbjct: 343 TNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGL 381
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 39/265 (14%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
A+S++ R+ + VTF+ +I + G D L + +M+ + V +P+ + YN
Sbjct: 264 ALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGV---KPNLVIYNR 320
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
LI + + A+ + +++ PN TYA L+ Y RAR ++A + EM +KG
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
L + ++YNT L+S DNR V+EAF
Sbjct: 381 LSLTVILYNT----------------LLSMCADNRY-------------------VDEAF 405
Query: 196 KFHSKILENNLIE-DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
+ + + D+++ + LI S +S A+ L M G P + S+I
Sbjct: 406 EIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQC 465
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPN 279
+ K V++ V+ ++++++ G P+
Sbjct: 466 YGKAKQVDDVVRTFDQVLELGITPD 490
>AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: EMB2745 (EMBRYO DEFECTIVE 2745)
(TAIR:AT5G39710.1); Has 19818 Blast hits to 5849
proteins in 171 species: Archae - 3; Bacteria - 16;
Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0;
Other Eukaryotes - 1100 (source: NCBI BLink). |
chr4:16599976-16605994 REVERSE
Length = 1089
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 167/414 (40%), Gaps = 43/414 (10%)
Query: 9 KECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRP 68
K CK A+ +R K + P + TFNM++ V ++ A V + ++ +
Sbjct: 444 KACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGV---LRLVQESGMTA 500
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
D Y LI K GK+ ++ ++M + N+ T+ LIDG +RA + +AF
Sbjct: 501 DCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY 560
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIP--PDKFTYSILTKGLC 186
+ K + + V++N +I G ++ +++ M P PD + L K C
Sbjct: 561 GILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACC 620
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
G V A + + I + + + I +N +S + A + M + + PD V
Sbjct: 621 NAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEV 680
Query: 247 TFGSLID--GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXX 304
F +LID GH K ++ A + + G +
Sbjct: 681 FFSALIDVAGHAK--MLDEAFGILQDAKSQGIR--------------------------- 711
Query: 305 XXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGH 364
I+Y++L+ CN+ +A +K+ + +T N LI LC+
Sbjct: 712 -------LGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 365 IQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
+ +A E + + G P+ ITY++L+ + +K E KL GV P+
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 818
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 2/267 (0%)
Query: 28 IWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLT 87
+ P+ V FN +I + GA+D A V+++M+ + I PD I+ L+ C G++
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKA-ETHPIDPDHISIGALMKACCNAGQVE 626
Query: 88 MAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVI 147
A+++ + + I Y ++ S++ + A + +M +K + + V ++ +I
Sbjct: 627 RAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Query: 148 HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI 207
++ ++ I +YS L C + +A + + KI L
Sbjct: 687 DVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLR 746
Query: 208 EDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQV 267
+ N LI LC N L A + L + GL P+ +T+ L+ ++ + E + ++
Sbjct: 747 PTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKL 806
Query: 268 YEKMMKSGEKPNLVLYNSVINGLCKEE 294
+ G PNL++ I LCK
Sbjct: 807 LSQAKGDGVSPNLIMCR-CITSLCKRR 832
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 116/285 (40%), Gaps = 5/285 (1%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+I + K K+ VF++ G+ N+ TF +ID + G + K ++
Sbjct: 507 TLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQV---AKAFGAYGIL 563
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEK--DIVPNVRTYATLIDGYSRAR 119
+++PD + +N LI + G + A + EM + I P+ + L+ A
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+E A + + K G+ +Y ++ GD + + M + + PD+ +S
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFS 683
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L ++EAF + S++ L+ C + + A +L +
Sbjct: 684 ALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSI 743
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYN 284
L P I T +LI C+ + A++ +++ G KPN + Y+
Sbjct: 744 KLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYS 788
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 133/331 (40%), Gaps = 36/331 (10%)
Query: 103 PNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLL 162
P + T+ L+ + ++ +E A + + + G+ + +Y T+I G ++ + +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 163 ISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR 222
M ++ + + T+ L G R G V +AF + + N+ D N LI+ +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 223 SNNLSGAKQLLASMYVR--GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNL 280
S + A +LA M + PD ++ G+L+ C G VE A +VY+ + K G +
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 281 VLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAM 340
+Y +N K SG D A + M
Sbjct: 645 EVYTIAVNSCSK----------------------------------SGDWDFACSIYKDM 670
Query: 341 KNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSP 400
K + + ++ LI+ + +A +++ QG I+Y+ L+ +
Sbjct: 671 KEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDW 730
Query: 401 EEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
++ ++L++ + + P T A+++ L +
Sbjct: 731 KKALELYEKIKSIKLRPTISTMNALITALCE 761
>AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15009605-15012319 FORWARD
Length = 904
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 183/411 (44%), Gaps = 10/411 (2%)
Query: 23 SLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM-SVYSIRPDSITYNCLIGGFC 81
S + I N +F+ ++ K G +D L ++ + + S + +S Y+ LI
Sbjct: 479 SFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAF----ESHLYHLLICSCK 534
Query: 82 KMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSV 141
+ G+LT A K+ N ME D N+ +T+ID Y+ EA +L + G+V++ +
Sbjct: 535 ESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRI 594
Query: 142 IYNTVIHWLYVEGDMEGVSLLISSMVDNR-IPPDKFTYSILTKGLCRNGNVNEAFKFHSK 200
++ V+ G +E ++ M + + I PD + + + + + ++ + +
Sbjct: 595 GFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYR 654
Query: 201 ILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGN 260
I ++ + + +N +IN R+ L M G P+ VTF L+D + K
Sbjct: 655 IRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKL 714
Query: 261 VENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVI--TYN 318
+ +++ + G +++ YN++I K + + F V YN
Sbjct: 715 FKKVNELFLLAKRHG-VVDVISYNTIIAAYGKNKDYTNMSSAIKNMQ-FDGFSVSLEAYN 772
Query: 319 TLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
TL++ Y ++++ + MK + +H TYN +IN + G I + +++K +
Sbjct: 773 TLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKES 832
Query: 379 GFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
G PD +Y LI ++ EE + L M + +IP K TY +V+ L
Sbjct: 833 GLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 174/413 (42%), Gaps = 46/413 (11%)
Query: 8 CKEC-KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSI 66
CKE +L +A+ ++ ++ N+ + +ID+ MG A K+ ++ V
Sbjct: 533 CKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVV-- 590
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMME-KDIVPNVRTYATLIDGYSRARSLEEAF 125
D I ++ ++ + K G L A + M E KDIVP+V + ++ Y + ++
Sbjct: 591 -LDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQ 649
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
L + K G+ N +YN VI+ ++ +S M+ P+ T+++L
Sbjct: 650 HLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVY 709
Query: 186 CRNG---NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
+ VNE F + + + + D S+N +I ++ + + + +M G
Sbjct: 710 GKAKLFKKVNELFL----LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFS 765
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
+ + +L+D + K+ +E + ++M KS P
Sbjct: 766 VSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGP------------------------ 801
Query: 303 XXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKL 362
D TYN +IN Y G IDE +K +G+ + +YNTLI
Sbjct: 802 ----------DHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIG 851
Query: 363 GHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
G +++A L+K M + +PD +TYT L+T+ + E IK +M G+
Sbjct: 852 GMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/468 (20%), Positives = 195/468 (41%), Gaps = 50/468 (10%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N VIYA K+ + A F+ L+ G+ PNV T M++ + K ++ A S M
Sbjct: 214 NTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRK 273
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ Y+ +I + ++ AE++ + M + + + + +++ YS+
Sbjct: 274 FGIVC----ESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGK 329
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+E A + M G N + YNT+I ME L + + + PD+ +Y
Sbjct: 330 MELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRS 389
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ +G R N EA ++ ++ ++F+ LIN + + GA + + M G
Sbjct: 390 MIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG 449
Query: 241 ---------------------LVPDIV-------------TFGSLIDGHCKEGNVENAVQ 266
+VP ++ +F SL+ + K G V++ +
Sbjct: 450 CQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLG 509
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKE-----EXXXXXXXXXXXXXXMNLFDVITYNTLI 321
+ + LY+ +I CKE + +NL IT +T+I
Sbjct: 510 LLREKKWRDSAFESHLYHLLICS-CKESGQLTDAVKIYNHKMESDEEINLH--IT-STMI 565
Query: 322 NGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ-GF 380
+ Y G+ EA +K++G+ + ++ ++ K G +++A ++++M Q
Sbjct: 566 DIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDI 625
Query: 381 VPDYITYTILITSFSKKCSPEEVIKLHDYMVLK-GVIPHKQTYKAVVS 427
VPD + ++ + +KC ++ ++ Y + K G+ +++ Y V++
Sbjct: 626 VPDVYLFRDMLRIY-QKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVIN 672
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 6/227 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N VI + L E F +++G PN VTFN+++DV K K V+++ +
Sbjct: 668 NCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAK----LFKKVNELFL 723
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLT-MAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
++ D I+YN +I + K T M+ +KN M ++ Y TL+D Y + +
Sbjct: 724 LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKN-MQFDGFSVSLEAYNTLLDAYGKDK 782
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+E+ + M K + YN +I+ +G ++ V+ ++ + ++ + PD +Y+
Sbjct: 783 QMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYN 842
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNL 226
L K G V EA ++ N+I D ++ L+ L R++
Sbjct: 843 TLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEF 889
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 5/259 (1%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
N V +++I+ V + D A ++ E+ + + +N +I K G + +A
Sbjct: 173 NFVAYSLILRVLGRREEWDRAEDLIK--ELCGFHEFQKSYQVFNTVIYACTKKGNVKLAS 230
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
K + M+E + PNV T L+ Y + ++EEA M K G+V S Y+++I +
Sbjct: 231 KWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESA-YSSMIT-I 288
Query: 151 YVEGDM-EGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
Y + + +I M +R+ + ++ + G + A + +
Sbjct: 289 YTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPN 348
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
++N LI + + A+ L + GL PD ++ S+I+G + N E A Y+
Sbjct: 349 IIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQ 408
Query: 270 KMMKSGEKPNLVLYNSVIN 288
++ + G KPN ++IN
Sbjct: 409 ELKRCGYKPNSFNLFTLIN 427
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/430 (19%), Positives = 169/430 (39%), Gaps = 24/430 (5%)
Query: 15 EAMSVFYRSLKH-GIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITY 73
E +Y+ LK G PN +I++ K G D A+K + M + Y
Sbjct: 401 EEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGC--------QY 452
Query: 74 NCLIG----GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
+ ++G + K+GK+ + + I N ++++L+ Y + +++ L
Sbjct: 453 SSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLR 512
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
E + S +Y+ +I G + + + +++ + S + G
Sbjct: 513 EKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMG 572
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM-YVRGLVPDIVTF 248
+EA K + + + ++ D +I++ ++ +L A +L M + +VPD+ F
Sbjct: 573 EFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLF 632
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
++ + K + +Y ++ KSG N +YN VIN C
Sbjct: 633 RDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVIN-CCARALPLDELSGTFEEMI 691
Query: 309 MNLF--DVITYNTLINGYCNSG---KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLG 363
F + +T+N L++ Y + K++E F + K G+ + +YNT+I K
Sbjct: 692 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLA---KRHGVV-DVISYNTIIAAYGKNK 747
Query: 364 HIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYK 423
+K M GF Y L+ ++ K E+ + M P TY
Sbjct: 748 DYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYN 807
Query: 424 AVVSPLLQEG 433
+++ ++G
Sbjct: 808 IMINIYGEQG 817
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 182/400 (45%), Gaps = 48/400 (12%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
++ +N+ I + G + AL+V +M R S++YN +I G+ + G+ +A
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMP-------RWSSVSYNGMISGYLRNGEFELAR 115
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
KL +EM E+D+V ++ +I GY R R+L +A L + M ++ + +NT++
Sbjct: 116 KLFDEMPERDLV----SWNVMIKGYVRNRNLGKARELFEIMPERDVCS----WNTMLSGY 167
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA-FKFHSKILENNLIED 209
G ++ S+ D + +++ L +N + EA F S+ EN +
Sbjct: 168 AQNGCVDDA----RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR--ENWAL-- 219
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
S N L+ + + A+Q SM VR D+V++ ++I G+ + G ++ A Q+++
Sbjct: 220 -VSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFD 274
Query: 270 KMMKSGEKP--NLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNS 327
E P ++ + ++++G + N +++N ++ GY
Sbjct: 275 ------ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN---EVSWNAMLAGYVQG 325
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
+++ A M N +T+NT+I + G I +AK L M + D +++
Sbjct: 326 ERMEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSW 377
Query: 388 TILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
+I +S+ E ++L M +G ++ ++ + +S
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALS 417
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 175/393 (44%), Gaps = 33/393 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N ++ A + K+ EA +F +S ++ W +V++N C +G K+V +
Sbjct: 192 NALLSAYVQNSKMEEACMLF-KSREN--WA-LVSWN------CLLGGFVKKKKIVEARQF 241
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
++R D +++N +I G+ + GK+ A +L +E V +V T+ ++ GY + R
Sbjct: 242 FDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGYIQNRM 296
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGD-MEGVSLLISSMVDNRIPPDKFTYS 179
+EEA L D+M ++ N V +N ++ YV+G+ ME L M + T++
Sbjct: 297 VEEARELFDKMPER----NEVSWNAMLA-GYVQGERMEMAKELFDVMPCRNVS----TWN 347
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ G + G ++EA K+ + D S +I +S + A +L M
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPK----RDPVSWAAMIAGYSQSGHSFEALRLFVQMERE 403
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G + +F S + +E Q++ +++K G + + N+++ CK
Sbjct: 404 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK---CGSI 460
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
M D++++NT+I GY G + A F +MK G+ + AT +++
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 360 CKLGHIQQAKELMKVMILQ-GFVPDYITYTILI 391
G + + ++ M G +P+ Y ++
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMV 553
>AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20901364-20902560 FORWARD
Length = 398
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 25/228 (10%)
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D S+N LI LC ++L A LL + +GL PDIVTF +L+ +G E +++
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF----------DVITYN 318
KM++ ++ YN+ + GL E +NLF DV ++N
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANE---------AKSKELVNLFGELKASGLKPDVFSFN 289
Query: 319 TLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
+I G N GK+DEA A+ + G + AT+ L+ +CK G + A EL K +
Sbjct: 290 AMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSK 349
Query: 379 GFVPDYITYTILITSF---SKKCSPEEVIKL---HDYMVLKGVIPHKQ 420
++ T L+ SK+ EE++K+ +D++ LK +P ++
Sbjct: 350 RYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDFLKLKLNLPSQE 397
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 8/262 (3%)
Query: 38 IIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMM 97
II + K G + A KV E M + +++N L+ + K + E+L NE+
Sbjct: 115 IISLYGKAGMFENAQKV---FEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELP 171
Query: 98 EK-DIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM 156
K I P++ +Y TLI SL EA L DE+ KGL + V +NT++ Y++G
Sbjct: 172 GKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQF 231
Query: 157 EGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNIL 216
E + + MV+ + D TY+ GL E ++ + L D FS N +
Sbjct: 232 ELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAM 291
Query: 217 INYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS-- 274
I + A+ + G PD TF L+ CK G+ E+A++++++
Sbjct: 292 IRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRY 351
Query: 275 --GEKPNLVLYNSVINGLCKEE 294
G+ L + ++ G +EE
Sbjct: 352 LVGQTTLQQLVDELVKGSKREE 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 101/209 (48%), Gaps = 3/209 (1%)
Query: 25 KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMG 84
K I P++V++N +I C+ ++ A+ ++ ++E ++PD +T+N L+ G
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKG---LKPDIVTFNTLLLSSYLKG 229
Query: 85 KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYN 144
+ + E++ +M+EK++ ++RTY + G + +E L E+ GL + +N
Sbjct: 230 QFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFN 289
Query: 145 TVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
+I EG M+ +V + PDK T+++L +C+ G+ A + +
Sbjct: 290 AMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSK 349
Query: 205 NLIEDAFSHNILINYLCRSNNLSGAKQLL 233
+ + L++ L + + A++++
Sbjct: 350 RYLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING--LCKEEXXXXXXXXXXXX 306
+I + K G ENA +V+E+M K +++ +N++++ L K+
Sbjct: 113 ARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPG 172
Query: 307 XXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
D+++YNTLI C + EA A ++N G+ + T+NTL+ G +
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 367 QAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
+E+ M+ + D TY + + + +E++ L + G+ P ++ A++
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 427 SPLLQEG 433
+ EG
Sbjct: 293 RGSINEG 299
>AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 136/312 (43%), Gaps = 43/312 (13%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ LCKE K +E V LK I PN TFN+ I CK ++ AL + +M+
Sbjct: 194 NLLLDTLCKE-KRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMK- 251
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ RP I+Y +I +C+ + ++ +EM PN TY T++ + +
Sbjct: 252 --GHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME-------------GVSLLIS--- 164
EEA R+ M + G +S+ YN +IH L G +E GVS+ S
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 165 SMV---------------------DNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSK-IL 202
SM+ N PD TY L + + G+V E K + +
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 203 ENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVE 262
+++L D ++ LI LCR+N A L M + + P T L++ K+ N+
Sbjct: 430 KHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLE-EVKKKNMH 488
Query: 263 NAVQVYEKMMKS 274
+ + E +MK+
Sbjct: 489 ESAERIEHIMKT 500
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 150/381 (39%), Gaps = 36/381 (9%)
Query: 32 VVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEK 91
+VT N + + + + V + + + + ++ + N L+ CK ++ A +
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-R 210
Query: 92 LKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLY 151
+ ++ I PN T+ I G+ +A +EEA EM G + Y T+I
Sbjct: 211 VVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
Query: 152 VEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAF 211
+ + V ++S M N PP+ TY+ + L EA + +++ + D+
Sbjct: 271 QQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
Query: 212 SHNILINYLCRSNNLSGAKQLL-ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
+N LI+ L R+ L A+++ M G+ + T+ S+I +C + A+++ ++
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKI 330
M S LC DV TY L+ G +
Sbjct: 391 MESS--------------NLCNP-------------------DVHTYQPLLRSCFKRGDV 417
Query: 331 DEAFAFSFAM-KNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
E M ++ + +TY LI LC+ + A L + MI Q P + T +
Sbjct: 418 VEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLL 477
Query: 390 LITSFSKKCSPEEVIKLHDYM 410
L+ KK E ++ M
Sbjct: 478 LLEEVKKKNMHESAERIEHIM 498
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 146/336 (43%), Gaps = 41/336 (12%)
Query: 83 MGKLTMAEKLKN--EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNS 140
+GK +++K E M D + + T A ++ ++ A EEA + D + + GL
Sbjct: 131 LGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGL---- 186
Query: 141 VIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSK 200
E + E ++LL+ + LC+ V +A +
Sbjct: 187 ------------EKNTESMNLLLDT-------------------LCKEKRVEQA-RVVLL 214
Query: 201 ILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGN 260
L++++ +A + NI I+ C++N + A + M G P ++++ ++I +C++
Sbjct: 215 QLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFE 274
Query: 261 VENAVQVYEKMMKSGEKPNLVLYNSVINGL-CKEEXXXXXXXXXXXXXXMNLFDVITYNT 319
++ +M +G PN + Y ++++ L ++E D + YN
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 320 LINGYCNSGKIDEA-FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
LI+ +G+++EA F M G++ N +TYN++I C +A EL+K M
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 379 GFV-PDYITYTILITSFSKKCSPEEVIKLHDYMVLK 413
PD TY L+ S K+ EV KL MV K
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 98/222 (44%), Gaps = 1/222 (0%)
Query: 212 SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
++++ ++ L ++ K+ + M LV + T ++ G E AV +++++
Sbjct: 123 AYDMAVDILGKAKKWDRMKEFVERMRGDKLVT-LNTVAKIMRRFAGAGEWEEAVGIFDRL 181
Query: 272 MKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKID 331
+ G + N N +++ LCKE+ + T+N I+G+C + +++
Sbjct: 182 GEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVE 241
Query: 332 EAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
EA MK G +Y T+I C+ + E++ M G P+ ITYT ++
Sbjct: 242 EALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIM 301
Query: 392 TSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+S + + EE +++ M G P Y ++ L + G
Sbjct: 302 SSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 36/240 (15%)
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
G EA ++ E L ++ S N+L++ LC+ + A+ +L + + P+ TF
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTF 227
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
I G CK VE A+ ++M G +P C
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRP------------C----------------- 258
Query: 309 MNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
VI+Y T+I YC + + + M+ G N TY T+++ L ++A
Sbjct: 259 -----VISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 369 KELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDY-MVLKGVIPHKQTYKAVVS 427
+ M G PD + Y LI + ++ EE ++ M GV + TY ++++
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
>AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 136/312 (43%), Gaps = 43/312 (13%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ LCKE K +E V LK I PN TFN+ I CK ++ AL + +M+
Sbjct: 194 NLLLDTLCKE-KRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMK- 251
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ RP I+Y +I +C+ + ++ +EM PN TY T++ + +
Sbjct: 252 --GHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDME-------------GVSLLIS--- 164
EEA R+ M + G +S+ YN +IH L G +E GVS+ S
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 165 SMV---------------------DNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSK-IL 202
SM+ N PD TY L + + G+V E K + +
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 203 ENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVE 262
+++L D ++ LI LCR+N A L M + + P T L++ K+ N+
Sbjct: 430 KHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLE-EVKKKNMH 488
Query: 263 NAVQVYEKMMKS 274
+ + E +MK+
Sbjct: 489 ESAERIEHIMKT 500
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 150/381 (39%), Gaps = 36/381 (9%)
Query: 32 VVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEK 91
+VT N + + + + V + + + + ++ + N L+ CK ++ A +
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-R 210
Query: 92 LKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLY 151
+ ++ I PN T+ I G+ +A +EEA EM G + Y T+I
Sbjct: 211 VVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
Query: 152 VEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAF 211
+ + V ++S M N PP+ TY+ + L EA + +++ + D+
Sbjct: 271 QQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
Query: 212 SHNILINYLCRSNNLSGAKQLL-ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
+N LI+ L R+ L A+++ M G+ + T+ S+I +C + A+++ ++
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKI 330
M S LC DV TY L+ G +
Sbjct: 391 MESS--------------NLCNP-------------------DVHTYQPLLRSCFKRGDV 417
Query: 331 DEAFAFSFAM-KNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
E M ++ + +TY LI LC+ + A L + MI Q P + T +
Sbjct: 418 VEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLL 477
Query: 390 LITSFSKKCSPEEVIKLHDYM 410
L+ KK E ++ M
Sbjct: 478 LLEEVKKKNMHESAERIEHIM 498
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 146/336 (43%), Gaps = 41/336 (12%)
Query: 83 MGKLTMAEKLKN--EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNS 140
+GK +++K E M D + + T A ++ ++ A EEA + D + + GL
Sbjct: 131 LGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGL---- 186
Query: 141 VIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSK 200
E + E ++LL+ + LC+ V +A +
Sbjct: 187 ------------EKNTESMNLLLDT-------------------LCKEKRVEQA-RVVLL 214
Query: 201 ILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGN 260
L++++ +A + NI I+ C++N + A + M G P ++++ ++I +C++
Sbjct: 215 QLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFE 274
Query: 261 VENAVQVYEKMMKSGEKPNLVLYNSVINGL-CKEEXXXXXXXXXXXXXXMNLFDVITYNT 319
++ +M +G PN + Y ++++ L ++E D + YN
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 320 LINGYCNSGKIDEA-FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
LI+ +G+++EA F M G++ N +TYN++I C +A EL+K M
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 379 GFV-PDYITYTILITSFSKKCSPEEVIKLHDYMVLK 413
PD TY L+ S K+ EV KL MV K
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 98/222 (44%), Gaps = 1/222 (0%)
Query: 212 SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
++++ ++ L ++ K+ + M LV + T ++ G E AV +++++
Sbjct: 123 AYDMAVDILGKAKKWDRMKEFVERMRGDKLVT-LNTVAKIMRRFAGAGEWEEAVGIFDRL 181
Query: 272 MKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKID 331
+ G + N N +++ LCKE+ + T+N I+G+C + +++
Sbjct: 182 GEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVE 241
Query: 332 EAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
EA MK G +Y T+I C+ + E++ M G P+ ITYT ++
Sbjct: 242 EALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIM 301
Query: 392 TSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+S + + EE +++ M G P Y ++ L + G
Sbjct: 302 SSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 36/240 (15%)
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
G EA ++ E L ++ S N+L++ LC+ + A+ +L + + P+ TF
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTF 227
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
I G CK VE A+ ++M G +P C
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRP------------C----------------- 258
Query: 309 MNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
VI+Y T+I YC + + + M+ G N TY T+++ L ++A
Sbjct: 259 -----VISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 369 KELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDY-MVLKGVIPHKQTYKAVVS 427
+ M G PD + Y LI + ++ EE ++ M GV + TY ++++
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
>AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4229994-4231178 REVERSE
Length = 394
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 117/255 (45%), Gaps = 4/255 (1%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
A VF + ++FN +++ DL + E+ SI PD +YN
Sbjct: 125 AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFK--ELPGKLSIEPDVASYNT 182
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLI-DGYSRARSLEEAFRLCDEMMKK 134
LI G C G T A L +E+ K + P+ T+ L+ + Y++ + EE ++ M++K
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGK-FEEGEQIWARMVEK 241
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
+ + YN + L +E E + L + N + PD FT++ + KG G ++EA
Sbjct: 242 NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEA 301
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
++ +I +N F N L+ +C++ +L A +L ++ + L+ D ++D
Sbjct: 302 ITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDA 361
Query: 255 HCKEGNVENAVQVYE 269
K + A ++ E
Sbjct: 362 LVKGSKQDEAEEIVE 376
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 7/212 (3%)
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D S+N LI LC + + A L+ + +GL PD +TF L+ +G E Q++
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNS 327
+M++ K ++ YN+ + GL E L DV T+ +I G+ +
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
GK+DEA + ++ G +N+L+ +CK G ++ A EL K + + + D
Sbjct: 296 GKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVL 355
Query: 388 TILITSF---SKKCSPEEVIKL---HDYMVLK 413
++ + SK+ EE+++L +DY+ K
Sbjct: 356 QEVVDALVKGSKQDEAEEIVELAKTNDYLQCK 387
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 38 IIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMM 97
II++ ++G + A KV +M + + ++++N L+ K + E + E+
Sbjct: 112 IINLYGRVGMFENAQKVFDEM---PERNCKRTALSFNALLNACVNSKKFDLVEGIFKELP 168
Query: 98 EK-DIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM 156
K I P+V +Y TLI G S EA L DE+ KGL + + +N ++H Y +G
Sbjct: 169 GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 157 EGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNIL 216
E + + MV+ + D +Y+ GL E K+ N L D F+ +
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAM 288
Query: 217 INYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE 276
I L A + G P F SL+ CK G++E+A ++ +++
Sbjct: 289 IKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRL 348
Query: 277 KPNLVLYNSVINGLCK 292
+ + V++ L K
Sbjct: 349 LVDEAVLQEVVDALVK 364
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
+I+ + + G ENA +V+++M + K + +N+++N C
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNA-CVNSKKFDLVEGIFKELP 168
Query: 309 MNLF---DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
L DV +YNTLI G C G EA A ++N G+ +H T+N L++ G
Sbjct: 169 GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
++ +++ M+ + D +Y + + + EE++ L D + + P T+ A+
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAM 288
Query: 426 VSPLLQEG 433
+ + EG
Sbjct: 289 IKGFVSEG 296
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I LC + EA+++ G+ P+ +TFN+++ + G + ++ ++M
Sbjct: 181 NTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVE 240
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+V + D +YN + G K L +++ ++ P+V T+ +I G+
Sbjct: 241 KNV---KRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 297
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L+EA E+ K G ++N+++ + GD+E L + R+ D+
Sbjct: 298 LDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQE 357
Query: 181 LTKGLCRNGNVNEA 194
+ L + +EA
Sbjct: 358 VVDALVKGSKQDEA 371
>AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217) |
chr1:29900617-29903127 FORWARD
Length = 836
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 137/333 (41%), Gaps = 41/333 (12%)
Query: 102 VPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG-----LVMNSVIYNTVIHWLYVEGDM 156
+P+ Y L DG ++ R L +EM++ L N+ YN VI +L +
Sbjct: 202 LPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNA--YNQVIQYLAKAEKL 259
Query: 157 EGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNIL 216
E ++ D TY+ L G +AF+ + + + + + D ++ ++
Sbjct: 260 EVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELI 319
Query: 217 INYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE 276
I L +S L A +L M R L P F SL+D K G ++ +++VY +M G
Sbjct: 320 IPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGH 379
Query: 277 KPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAF 336
+P+ ++ S LI+ Y +GK+D A
Sbjct: 380 RPSATMFVS----------------------------------LIDSYAKAGKLDTALRL 405
Query: 337 SFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
MK +G N Y +I K G ++ A + K M GF+P TY+ L+ +
Sbjct: 406 WDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAG 465
Query: 397 KCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
+ +K+++ M G+ P +Y ++++ L
Sbjct: 466 SGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLL 498
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 133/310 (42%), Gaps = 2/310 (0%)
Query: 107 TYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSM 166
Y +I ++A LE AF + + G +++ YN ++ +G + SM
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 167 VDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNL 226
D TY ++ L ++G ++ AFK ++ E L + L++ + ++ L
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 227 SGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSV 286
+ ++ M G P F SLID + K G ++ A++++++M KSG +PN LY +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 287 INGLCKEEXXXXXXXXXXXXXXMNLFDVI-TYNTLINGYCNSGKIDEAFAFSFAMKNAGI 345
I K TY+ L+ + SG++D A +M NAG+
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 346 AANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIK 405
++Y +L+ L + A +++ M G+ D +L+ + K S + +K
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI-YIKDASVDLALK 543
Query: 406 LHDYMVLKGV 415
+M G+
Sbjct: 544 WLRFMGSSGI 553
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 193/452 (42%), Gaps = 35/452 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
++I +L K +L A +F + + + P+ F+ ++D K G +D ++KV +M+
Sbjct: 317 ELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQG 376
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ RP + + LI + K GKL A +L +EM + PN Y +I+ ++++
Sbjct: 377 ---FGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
LE A + +M K G + Y+ ++ G ++ + +SM + + P +Y
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYIS 493
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L L V+ A K ++ D + ++L+ Y+ + ++ A + L M G
Sbjct: 494 LLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDLALKWLRFMGSSG 552
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL--CKEEXXXX 298
+ + L + K G ++A + E ++ S K +LVLY S++ L C++E
Sbjct: 553 IKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDE---- 608
Query: 299 XXXXXXXXXXMNLFDVITYNT------LINGYCNSGKIDEAFAFSFAMK-NAGIAANHAT 351
M++ + L G + F F + + A
Sbjct: 609 ----DKERQLMSILSATKHKAHAFMCGLFTGPEQRKQPVLTFVREFYQGIDYELEEGAAR 664
Query: 352 Y--NTLINFLCKLGHIQQAKELMKVMILQGFVP------DYITYTILITSFSKKCSPEEV 403
Y N L+N+L +G I +A+ + KV P +I +++ + + S + V
Sbjct: 665 YFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAV 724
Query: 404 I-KLHDY---MVLKGVIPHKQTYKAVVSPLLQ 431
+ LH + M+ GV+P + K V P L+
Sbjct: 725 VHTLHRFRKRMLYYGVVPRR--IKLVTGPTLK 754
>AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL
FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040
FORWARD
Length = 778
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 174/421 (41%), Gaps = 47/421 (11%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
P+ FN +++ +G D K+ E MS + PD +TYN +I ++G+ +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKL---FEEMSEWDCEPDVLTYNVMIKLCARVGRKELI 290
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYN----- 144
+ +++K I + T +L+ Y L A R+ M +K + V+
Sbjct: 291 VFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAED 350
Query: 145 ------------------------TVIHWLYVEGDMEGVSLLISSMVDNR-----IP--- 172
+ + EG ++ L+ + VD +P
Sbjct: 351 LKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVF 410
Query: 173 -PDKFTYSILTKGLCRNGNVNEAFKFHSKIL---ENNLIEDAFSHNILINYLCRSNNLSG 228
PD Y+ L KG +NG V + + + + N D ++ +++ + +
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 229 AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK-SGEKPNLVLYNSVI 287
A+Q+LA M G+ + +T+ L+ G+CK+ ++ A + +M + +G +P++V YN +I
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 288 NGLCKEEXXXXXXXXXXXXXXMNLFDV-ITYNTLINGYCNSGKIDEA-FAFSFAMKNAGI 345
+G + + I+Y TL+ + SG+ A F M + +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 346 AANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIK 405
+ +N L+ C+LG I+ A+ ++ M GF P+ TY L S+ P + +
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALL 650
Query: 406 L 406
L
Sbjct: 651 L 651
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/446 (19%), Positives = 175/446 (39%), Gaps = 62/446 (13%)
Query: 6 ALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMG------AMDLALKVVSKME 59
A K + L A+SV ++ G P+V + + G ++ L + + +++
Sbjct: 162 AAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITRRVK 221
Query: 60 VMSVYSI----RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
S+ RPD+ +N ++ +G KL EM E D P+V TY +I
Sbjct: 222 RFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLC 281
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
+R E + + ++ KG+ + ++++ GD+ ++ +M + R
Sbjct: 282 ARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKR----- 336
Query: 176 FTYSILTKGLCR-------------------------NGNVNEAFKFHSKILENNLIEDA 210
+ LC+ + + + ++ E ++
Sbjct: 337 -------RDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVV--- 386
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
++ L S + SG LL ++ PD + +L+ G+ K G V + ++ E
Sbjct: 387 ---DVFKKLLPNSVDPSGEPPLLPKVF----APDSRIYTTLMKGYMKNGRVADTARMLEA 439
Query: 271 MMKSGEK---PNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCN 326
M + ++ P+ V Y +V++ M + + ITYN L+ GYC
Sbjct: 440 MRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCK 499
Query: 327 SGKIDEAFAFSFAM-KNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
+ID A M ++AGI + +YN +I+ + A M +G P I
Sbjct: 500 QLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKI 559
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMV 411
+YT L+ +F+ P+ ++ D M+
Sbjct: 560 SYTTLMKAFAMSGQPKLANRVFDEMM 585
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 111/244 (45%), Gaps = 2/244 (0%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
P+ + ++ K G + +++ M + PD +TY ++ F G + A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK-GLVMNSVIYNTVIH 148
++ EM + N TY L+ GY + ++ A L EM + G+ + V YN +I
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
+ D G + M I P K +Y+ L K +G A + +++ + ++
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 209 -DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQV 267
D + N+L+ CR + A+++++ M G P++ T+GSL +G + +A+ +
Sbjct: 592 VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLL 651
Query: 268 YEKM 271
++++
Sbjct: 652 WKEI 655
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
A++ F GI P +++ ++ G LA +V +M M+ ++ D I +N
Sbjct: 542 ALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM--MNDPRVKVDLIAWNM 599
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
L+ G+C++G + A+++ + M E PNV TY +L +G S+AR +A L E+ ++
Sbjct: 600 LVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
>AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: PTAC2 (PLASTID
TRANSCRIPTIONALLY ACTIVE2) (TAIR:AT1G74850.1); Has 17570
Blast hits to 5782 proteins in 175 species: Archae - 1;
Bacteria - 18; Metazoa - 305; Fungi - 261; Plants -
16266; Viruses - 0; Other Eukaryotes - 719 (source: NCBI
BLink). | chr1:3639908-3643974 FORWARD
Length = 664
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 144/296 (48%), Gaps = 6/296 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKM-GAMDLALKVVSKME 59
N ++ L K KL + +F + + G+ P+VVT+N ++ K+ A++++ ++
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGEL- 228
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
I+ DS+ Y ++ G+ AE +M + PN+ Y++L++ YS
Sbjct: 229 --PHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKG 286
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSL-LISSMVDNRIPPDKFTY 178
++A L EM GLV N V+ T++ +Y++G + S L+S + ++ Y
Sbjct: 287 DYKKADELMTEMKSIGLVPNKVMMTTLLK-VYIKGGLFDRSRELLSELESAGYAENEMPY 345
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+L GL + G + EA + + D ++++I+I+ LCRS AK+L
Sbjct: 346 CMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSET 405
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
D+V +++ +C+ G +E+ +++ +KM + P+ ++ +I KE+
Sbjct: 406 TYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEK 461
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 153/341 (44%), Gaps = 5/341 (1%)
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG 154
E M++ +V TY++ I + A+++ +A + + + +N I N+++ L G
Sbjct: 122 EWMQQHGKISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNG 180
Query: 155 DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGN-VNEAFKFHSKILENNLIEDAFSH 213
++ L M + + PD TY+ L G + N +A + ++ N + D+ +
Sbjct: 181 KLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMY 240
Query: 214 NILINYLCRSNNLSG-AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMM 272
++ +C SN S A+ + M V G P+I + SL++ + +G+ + A ++ +M
Sbjct: 241 GTVLA-ICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMK 299
Query: 273 KSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD-VITYNTLINGYCNSGKID 331
G PN V+ +++ K + + Y L++G +GK++
Sbjct: 300 SIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLE 359
Query: 332 EAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
EA + MK G+ ++ + +I+ LC+ ++AKEL + D + ++
Sbjct: 360 EARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTML 419
Query: 392 TSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
++ + E V+++ M + V P T+ ++ ++E
Sbjct: 420 CAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKE 460
>AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) |
chr4:18395294-18397578 FORWARD
Length = 563
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 148/365 (40%), Gaps = 49/365 (13%)
Query: 68 PDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY----SRARSLEE 123
PD+ Y+ LI K G+ MA L +EM P+ Y LI + +A++LE+
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 124 AFRLCDEMMKKGLVM---NSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
D+M KG+ N V YN ++ G ++ V+ L + + + PD +T+
Sbjct: 191 VRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTF-- 246
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
N + DA+ N +I + + +L M
Sbjct: 247 ------------------------NGVMDAYGKNGMIKEM---------EAVLTRMRSNE 273
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
PDI+TF LID + K+ E Q ++ +M+S EKP L +NS+I K
Sbjct: 274 CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333
Query: 301 XXXXXXXXMN-LFDVITYNTLI--NGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
MN + ITY +I GYC G + A + + +T N ++
Sbjct: 334 WVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLE 391
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
C+ G +A +L PD TY L +++K E+V L M G++P
Sbjct: 392 VYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVP 451
Query: 418 HKQTY 422
+K+ +
Sbjct: 452 NKRFF 456
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING-LCKEEXXX 297
R +PD + LI K+G A+ ++ +M SG +P+ +YN++I L +
Sbjct: 127 RWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186
Query: 298 XXXXXXXXXXXMNLFD-----VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
M + V+TYN L+ + SGK+D+ A + + ++ + T+
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTF 246
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVL 412
N +++ K G I++ + ++ M PD IT+ +LI S+ KK E++ + ++
Sbjct: 247 NGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR 306
Query: 413 KGVIPHKQTYKAVV 426
P T+ +++
Sbjct: 307 SKEKPTLPTFNSMI 320
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 115/285 (40%), Gaps = 42/285 (14%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ A + K+ + ++F + P+V TFN ++D K G + V+++M
Sbjct: 212 NILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRS 271
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+PD IT+N LI + K + E+ +M P + T+ ++I Y +AR
Sbjct: 272 NEC---KPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARM 328
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS- 179
+++A W++ M D P TY
Sbjct: 329 IDKA-----------------------EWVF------------KKMNDMNYIPSFITYEC 353
Query: 180 -ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
I+ G C G+V+ A + ++ E++ + A + N ++ CR+ A +L +
Sbjct: 354 MIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASA 411
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLY 283
+ PD T+ L + K E + +KM K G PN +
Sbjct: 412 FRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE
Length = 711
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 129/272 (47%), Gaps = 8/272 (2%)
Query: 9 KECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRP 68
K K+ E +S++ R++ G P+ + F+++ + + G D V+ +M+ M V +P
Sbjct: 268 KSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDV---KP 324
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
+ + YN L+ + GK +A L NEM+E + PN +T L+ Y +AR +A +L
Sbjct: 325 NVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLW 384
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDN-RIPPDKFTYSILTKGLCR 187
+EM K M+ ++YNT+++ G E L + M ++ + PD F+Y+ +
Sbjct: 385 EEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGS 444
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
G +A + ++L+ + + L+ L ++ + + RG+ PD
Sbjct: 445 GGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRL 504
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPN 279
G L+ + E+A EK+M E+ N
Sbjct: 505 CGCLLSVMALCESSEDA----EKVMACLERAN 532
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 4/318 (1%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
++I YN + + + E++ EM++ + + TY+T+I R +A
Sbjct: 185 ETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWF 244
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
+ M K GL+ + V Y+ ++ G +E V L V PD +S+L K
Sbjct: 245 ERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEA 304
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
G+ + ++ ++ + +N L+ + R+ A+ L M GL P+ T
Sbjct: 305 GDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTL 364
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE---EXXXXXXXXXXX 305
+L+ + K +A+Q++E+M + +LYN+++N +C + E
Sbjct: 365 TALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MCADIGLEEEAERLFNDMK 423
Query: 306 XXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
D +Y ++N Y + GK ++A M AG+ N L+ L K I
Sbjct: 424 ESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRI 483
Query: 366 QQAKELMKVMILQGFVPD 383
+ + I +G PD
Sbjct: 484 DDVVYVFDLSIKRGVKPD 501
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 112/280 (40%), Gaps = 2/280 (0%)
Query: 138 MNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKF 197
M ++ YN + L + + + MV + + D TYS + R N+A ++
Sbjct: 184 METIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEW 243
Query: 198 HSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK 257
++ + L+ D +++ +++ +S + L G PD + F L +
Sbjct: 244 FERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGE 303
Query: 258 EGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVIT 316
G+ + V ++M KPN+V+YN+++ + + L + T
Sbjct: 304 AGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKT 363
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
L+ Y + +A MK + YNTL+N +G ++A+ L M
Sbjct: 364 LTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMK 423
Query: 377 LQ-GFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
PD +YT ++ + E+ ++L + M+ GV
Sbjct: 424 ESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGV 463
>AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19214445-19215878 REVERSE
Length = 477
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 152/351 (43%), Gaps = 13/351 (3%)
Query: 21 YRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGF 80
YR K + NV T +++ + + D AL V+ K +V + D++ YN +I F
Sbjct: 121 YR--KEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCA---DTVAYNLVIRLF 175
Query: 81 CKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNS 140
G L +A+ L EM + P+V TY ++I+GY A +++A+RL EM K V+NS
Sbjct: 176 ADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNS 235
Query: 141 VIYNTVIHWLYVEGDMEGVSLLISSMVDNR----IPPDKFTYSILTKGLCRNGNVNEAFK 196
V Y+ ++ + GDME L++ M I P+ TY+++ + C V EA
Sbjct: 236 VTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALL 295
Query: 197 FHSKILENNLIEDAFSHNILINYLCRSN-NLSGAKQLLASMYVRGLVPDIVTFGSLIDGH 255
++ + + + +LI + ++ ++ +L+ + G V F S
Sbjct: 296 VLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSL 355
Query: 256 CKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL---F 312
+ E A +++ M+ G +P+ + + V LC E ++
Sbjct: 356 IRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTI 415
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLG 363
D + L+ G C G EA + +M + + + +I L K G
Sbjct: 416 DSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTG 466
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
DVITY ++INGYCN+GKID+A+ + M N TY+ ++ +CK G +++A EL+
Sbjct: 199 DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELL 258
Query: 373 KVMILQ---GFV-PDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSP 428
M + G + P+ +TYT++I +F +K EE + + D M +G +P++ T ++
Sbjct: 259 AEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318
Query: 429 LLQ 431
+L+
Sbjct: 319 VLE 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 118/262 (45%), Gaps = 4/262 (1%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+I C K+ +A + KH N VT++ I++ CK G M+ AL+++++ME
Sbjct: 206 MINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKED 265
Query: 63 VYS-IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDG-YSRARS 120
I P+++TY +I FC+ ++ A + + M + +PN T LI G
Sbjct: 266 GGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDED 325
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++ +L D+++K G V S +++ L E + M+ + PD S
Sbjct: 326 VKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSH 385
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIE--DAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ + LC + F + +I + ++ D+ H +L+ LC+ N A +L SM
Sbjct: 386 VFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLD 445
Query: 239 RGLVPDIVTFGSLIDGHCKEGN 260
+ + + +I+ K G+
Sbjct: 446 KKMRLKVSHVEKIIEALKKTGD 467
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 188/420 (44%), Gaps = 36/420 (8%)
Query: 22 RSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFC 81
R LK G+ N N ++++ K ++++ E + + DS ++N ++ G+
Sbjct: 320 RVLKSGLDSNGYICNSVLNMYAK-------CRLLADAESVFRDHAKLDSASFNIMVDGYV 372
Query: 82 KMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSV 141
+ +L A KL + M E+ V +Y TLI GY++ EA L EM G+++N V
Sbjct: 373 RSRRLWDALKLFDVMPERSCV----SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEV 428
Query: 142 IYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
TVI G + +L S + ++ F + L C + +A K ++
Sbjct: 429 TLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEM 488
Query: 202 LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNV 261
E NL+ + N+++N ++ + A++L + + DIV++G++IDG ++ +
Sbjct: 489 PERNLV----TWNVMLNGYSKAGLIEQAEELFDQITEK----DIVSWGTMIDGCLRKNQL 540
Query: 262 ENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE--EXXXXXXXXXXXXXXMNLFDVITYNT 319
+ A+ Y +M++ G KP+ V+ +++ + + +D + T
Sbjct: 541 DEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ-AT 599
Query: 320 LINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQG 379
+I+ Y S I + A + + A+ N LI K G ++QA+E+ Q
Sbjct: 600 IIHFYAVSNDIK----LALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFD----QT 651
Query: 380 FVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKG-VIPHKQTYKAVVSPL-----LQEG 433
D ++ +I+ +++ SP+ + L M+ V P T +V S + L+EG
Sbjct: 652 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 711
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 114/265 (43%), Gaps = 15/265 (5%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I K + +A VF ++ ++ ++N +I + + LAL + +M
Sbjct: 629 NALIAGFVKNGMVEQAREVFDQTHDK----DIFSWNAMISGYAQSLSPQLALHLFREM-- 682
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+S ++PD+IT + +G L ++ + + I PN A +ID Y++ S
Sbjct: 683 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGS 742
Query: 121 LEEAFRLCDEMMKKGLVMNSVI--YNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
+E A + + + +S I +N +I G + L S + I P+ T+
Sbjct: 743 IETALNIFHQTKN---ISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITF 799
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH-NILINYLCRSNNLSGAKQLLASMY 237
+ C G V + + ++ IE H +++ L ++ L AK+++ M
Sbjct: 800 VGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMP 859
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVE 262
V+ D++ +G L+ GNVE
Sbjct: 860 VKA---DVMIWGMLLSASRTHGNVE 881
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 174/454 (38%), Gaps = 86/454 (18%)
Query: 24 LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
+K W +V +D+ K ++D A KV +M D+ T+N ++ GFC+
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMP-------ERDATTWNAMLSGFCQS 131
Query: 84 GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM----MKKGLVMN 139
G A L EM +I P+ T TLI ++ S E++ +L + M ++ G+ +
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLI----QSASFEKSLKLLEAMHAVGIRLGVDVQ 187
Query: 140 SVIYNTVIHWLYVEGDMEGVSLLISS---------------------------------M 166
+ NT I GD++ L+ + M
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 167 VDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNL 226
+ PD T+ L + + HS + +D + N I+ +S +
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 227 SGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSV 286
A+ L M R V++ +I G+ ++G+++ A+ ++ M+KSGEKP+LV S+
Sbjct: 308 CSARLLFDIMTSR----TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSL 363
Query: 287 INGL--------------------CKEEXXX-------XXXXXXXXXXXMNLFD------ 313
I+G CK + ++FD
Sbjct: 364 ISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT 423
Query: 314 VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
V+T+ T+I GY +G EA M + NH T+ ++ G +++ E
Sbjct: 424 VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFH 483
Query: 374 VM-ILQGFVPDYITYTILITSFSKKCSPEEVIKL 406
+M + P Y+ ++ +K EE ++L
Sbjct: 484 IMKQVYNISPGLDHYSCMVDLLGRKGKLEEALEL 517
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 7/234 (2%)
Query: 161 LLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYL 220
LL M P+ FT+ + K R +V H+ ++++ D F ++
Sbjct: 38 LLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMF 97
Query: 221 CRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNL 280
+ N++ A ++ M R D T+ +++ G C+ G+ + A ++ +M + P+
Sbjct: 98 VKCNSVDYAAKVFERMPER----DATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 281 VLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFA 339
V ++I E+ + + V NT I+ Y G +D A A
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 340 MKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
+ ++N++ G A L +M+ + F PD T+ L S
Sbjct: 214 IDRGDRTV--VSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 117/274 (42%), Gaps = 49/274 (17%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
V+I ++ + EA+++F+ +K G P++VT +I K G+++ + ++ +
Sbjct: 327 VMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARAD-- 384
Query: 62 SVYSIRPDSITY-NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+Y + D++ N LI + K G + A + + EK +V T+ T+I GY+
Sbjct: 385 -IYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV----TWTTMIAGYALNGI 439
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
EA + L S M+D P+ T+
Sbjct: 440 FLEALK-----------------------------------LFSKMIDLDYKPNHITFLA 464
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH-NILINYLCRSNNLSGAKQLLASMYVR 239
+ + +G++ + +++ + + I H + +++ L R L A +L+ +M +
Sbjct: 465 VLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK 524
Query: 240 GLVPDIVTFGSLIDGHCK-EGNVENAVQVYEKMM 272
PD +G+L++ CK NV+ A Q E +
Sbjct: 525 ---PDAGIWGALLNA-CKIHRNVKIAEQAAESLF 554
>AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1955959-1959051 FORWARD
Length = 1030
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 136/310 (43%), Gaps = 12/310 (3%)
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG 154
EM + + T+A +I Y R A R EM GL+ +S + +I L +
Sbjct: 703 EMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKK 762
Query: 155 --DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAF- 211
++E + M+ + PD+ LC GN +A K ++L + F
Sbjct: 763 GRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDA-----KSCLDSLGKIGFP 817
Query: 212 ---SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
+++I I LCR L A LAS + D T+GS++ G + G+++ A+
Sbjct: 818 VTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKV 877
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNS 327
M + G KP + +Y S+I KE+ + V+TY +I GY +
Sbjct: 878 NSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSL 937
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
GK++EA+ M+ G + + TY+ IN LC+ + A +L+ M+ +G P I +
Sbjct: 938 GKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINF 997
Query: 388 TILITSFSKK 397
+ +++
Sbjct: 998 RTVFYGLNRE 1007
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 157/378 (41%), Gaps = 59/378 (15%)
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
YN ++ + L M ++L +EM + ++RT+ LI Y +A+ + + + ++M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 133 KKGLVMNSVIYNTVIHWLYV--EGDM----------EGVSL------------------- 161
K G +++ YN +I L + GD+ +G++
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 162 LISSMVDNRI------PPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI 215
++ S+ D+ + D F Y L K C +G + EA + ++ + DA I
Sbjct: 312 VVQSIADDMVRICEISEHDAFGY--LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEI 369
Query: 216 LINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
L+ LCR+N + A +++ M R L D +G +I G+ ++ +V A++ +E + KSG
Sbjct: 370 LVKGLCRANRMVDALEIVDIMKRRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSG 428
Query: 276 EKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF----------DVITYNTLINGYC 325
P + Y ++ L K NLF D + ++ G+
Sbjct: 429 RPPRVSTYTEIMQHLFK---------LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHL 479
Query: 326 NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
++ EA+ +M+ GI +Y+ + LC+ + ++ M V
Sbjct: 480 GQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDD 539
Query: 386 TYTILITSFSKKCSPEEV 403
++ +I+S K E++
Sbjct: 540 IFSWVISSMEKNGEKEKI 557
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 121/332 (36%), Gaps = 35/332 (10%)
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
K G IYNT++ +++ V L+S M N D T++IL + +
Sbjct: 182 KDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIG 241
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV---------- 242
+ K+ ++ DA ++NI+I LC + A + M +G+
Sbjct: 242 KGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLL 301
Query: 243 --------PDIV-----------------TFGSLIDGHCKEGNVENAVQVYEKMMKSGEK 277
D+V FG L+ C G ++ A+++ ++
Sbjct: 302 DCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMC 361
Query: 278 PNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFS 337
+ + ++ GLC+ L D Y +I+GY + +A
Sbjct: 362 LDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQF 421
Query: 338 FAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK 397
+K +G +TY ++ L KL ++ L MI G PD + T ++ +
Sbjct: 422 EVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQ 481
Query: 398 CSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
E K+ M KG+ P ++Y V L
Sbjct: 482 NRVAEAWKVFSSMEEKGIKPTWKSYSIFVKEL 513
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 6/246 (2%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
EA F ++ G P+ + C++G A + + + P ++ Y+
Sbjct: 768 EATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF----PVTVAYS 823
Query: 75 CLIGGFCKMGKLTMA-EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK 133
I C++GKL A +L + E+ ++ TY +++ G + L++A + M +
Sbjct: 824 IYIRALCRIGKLEEALSELASFEGERSLLDQY-TYGSIVHGLLQRGDLQKALDKVNSMKE 882
Query: 134 KGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNE 193
G +Y ++I + + E +E V M P TY+ + G G V E
Sbjct: 883 IGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEE 942
Query: 194 AFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLID 253
A+ + E D +++ IN LC++ A +LL+ M +G+ P + F ++
Sbjct: 943 AWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFY 1002
Query: 254 GHCKEG 259
G +EG
Sbjct: 1003 GLNREG 1008
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 117/296 (39%), Gaps = 37/296 (12%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I +LC + A+ + ++ GI + T+ M++D K +D+ + M
Sbjct: 263 NIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVR 322
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ S D+ Y L+ FC GK+ A +L E+ K++ + + + L+ G RA
Sbjct: 323 ICEIS-EHDAFGY--LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANR 379
Query: 121 LEEAFRLCDEMMKKGLVMNSV----------------------------------IYNTV 146
+ +A + D M ++ L ++V Y +
Sbjct: 380 MVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEI 439
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
+ L+ E L + M++N I PD + + G V EA+K S + E +
Sbjct: 440 MQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGI 499
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVE 262
S++I + LCRS+ ++ M+ +V F +I K G E
Sbjct: 500 KPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKE 555
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 172/423 (40%), Gaps = 86/423 (20%)
Query: 13 LLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYS------- 65
L E + ++ ++K + +V N ID+ K A+ A +V +M S
Sbjct: 356 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 415
Query: 66 ---------------------IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPN 104
I PD T+ ++ C G L ++ + +++ + N
Sbjct: 416 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASN 474
Query: 105 VRTYATLIDGYSRARSLEEAFRL----------------CDEMMKKGLVMNSVIYNTVIH 148
+LID YS+ +EEA ++ ++M K L V +N++I
Sbjct: 475 SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIIS 534
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
++ E +L + M++ I PDKFTY+ + + + H+++++ L
Sbjct: 535 GYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQS 594
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D + + L++ + +L ++ M+ + L D VT+ ++I G+ G E A+Q++
Sbjct: 595 DVYICSTLVDMYSKCGDLHDSRL----MFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLF 650
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG 328
E+M+ KPN V T+ +++ + G
Sbjct: 651 ERMILENIKPNHV----------------------------------TFISILRACAHMG 676
Query: 329 KIDEAFAFSFAMK-NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
ID+ + + MK + G+ Y+ +++ L K G +++A EL++ M + D I
Sbjct: 677 LIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA--DDVIWR 734
Query: 388 TIL 390
T+L
Sbjct: 735 TLL 737
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 144/330 (43%), Gaps = 34/330 (10%)
Query: 112 IDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRI 171
ID Y + ++L EAFR+ DEM ++ ++V +N +I G L SM+ +RI
Sbjct: 382 IDMYGKCQALAEAFRVFDEMRRR----DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 437
Query: 172 PPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQ 231
PD+FT+ + K C G++ + HS I+++ + ++ LI+ + + A++
Sbjct: 438 EPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 496
Query: 232 LLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC 291
+ + + R NV ++ EKM + V +NS+I+G
Sbjct: 497 IHSRFFQRA-------------------NVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 537
Query: 292 KEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHA 350
+E M + D TY T+++ N + + ++
Sbjct: 538 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 597
Query: 351 TYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYM 410
+TL++ K G + ++ +M + D++T+ +I ++ EE I+L + M
Sbjct: 598 ICSTLVDMYSKCGDLHDSR----LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM 653
Query: 411 VLKGVIPHKQTYKAVVSP-----LLQEGVE 435
+L+ + P+ T+ +++ L+ +G+E
Sbjct: 654 ILENIKPNHVTFISILRACAHMGLIDKGLE 683
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 24/285 (8%)
Query: 4 IYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSK------ 57
I C L M + +K G+ N +ID+ K G ++ A K+ S+
Sbjct: 447 ILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 506
Query: 58 -------MEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYAT 110
+E M ++ +++N +I G+ + A+ L MME I P+ TYAT
Sbjct: 507 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 566
Query: 111 LIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNR 170
++D + S ++ +++KK L + I +T++ GD+ L M +
Sbjct: 567 VLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRL----MFEKS 622
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
+ D T++ + G +G EA + +++ N+ + H I+ L ++
Sbjct: 623 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN---HVTFISILRACAHMGLID 679
Query: 231 QLLASMYVR----GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
+ L Y+ GL P + + +++D K G V+ A+++ +M
Sbjct: 680 KGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 724
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 157/347 (45%), Gaps = 23/347 (6%)
Query: 53 KVVSKMEVMSVYSIRP--DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYAT 110
K +K E ++ + P D +++ +I GF K+ L A K + M EK +V ++
Sbjct: 179 KWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVV----SWNA 234
Query: 111 LIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNR 170
++ GY++ E+A RL ++M++ G+ N + VI D L+ + + R
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR 294
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKI-LENNLIEDAFSHNILINYLCRSNNLSGA 229
+ + F + L + ++ A + +++ + NL+ + N +I+ R ++S A
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLV----TWNAMISGYTRIGDMSSA 350
Query: 230 KQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE-KPNLVLYNSVIN 288
+QL +M R ++V++ SLI G+ G A++ +E M+ G+ KP+ V SV++
Sbjct: 351 RQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLS 406
Query: 289 --GLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIA 346
G + + L D Y +LI Y G + EA MK +
Sbjct: 407 ACGHMADLELGDCIVDYIRKNQIKLNDS-GYRSLIFMYARGGNLWEAKRVFDEMKERDVV 465
Query: 347 ANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
+YNTL G + L+ M +G PD +TYT ++T+
Sbjct: 466 ----SYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA 508
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 202/493 (40%), Gaps = 93/493 (18%)
Query: 11 CKLLEAMSVFYRSLKHGI-WPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPD 69
C L A S + R + + +PNV N + KM D+A V+ E S I PD
Sbjct: 49 CTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKM---DMANDVLRLYEQRSRCGIMPD 105
Query: 70 SITYNCLIGGFCKMGKLTMA--EKL--------KNEMME----KDIVPNVR--------- 106
+ ++ +I + G L A EKL +N +M+ + V + R
Sbjct: 106 AFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQR 165
Query: 107 ---TYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW-LYVEGDMEGVSLL 162
+ +I GY + + EEA +L D M + N V+ W + + G + L
Sbjct: 166 KGSDWNVMISGYWKWGNKEEACKLFDMMPE----------NDVVSWTVMITGFAKVKDLE 215
Query: 163 ISSMVDNRIPPDK-FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLC 221
+ +R+P +++ + G +NG +A + + +L + + + I+I+
Sbjct: 216 NARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS 275
Query: 222 RSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLV 281
+ S + L+ + + + + +L+D H K ++++A +++ ++ G + NLV
Sbjct: 276 FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLV 332
Query: 282 LYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMK 341
+N++I+G + M +V+++N+LI GY ++G+ A F M
Sbjct: 333 TWNAMISGYTR---IGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMI 389
Query: 342 NAG------------------------------------IAANHATYNTLINFLCKLGHI 365
+ G I N + Y +LI + G++
Sbjct: 390 DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNL 449
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
+AK + M + D ++Y L T+F+ E + L M +G+ P + TY +V
Sbjct: 450 WEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSV 505
Query: 426 VSP-----LLQEG 433
++ LL+EG
Sbjct: 506 LTACNRAGLLKEG 518
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
NVV++N +I G LA++ M + +PD +T ++ M L + +
Sbjct: 361 NVVSWNSLIAGYAHNGQAALAIEFFEDM--IDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
+ + + + I N Y +LI Y+R +L EA R+ DEM ++ +V YNT+
Sbjct: 419 CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVS----YNTLFTAF 474
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
GD L+S M D I PD+ TY+ + R G + E + I
Sbjct: 475 AANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 126/290 (43%), Gaps = 44/290 (15%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVAC---------------------------KMGA 47
+A+ +F L+ G+ PN T+ ++I AC K
Sbjct: 247 DALRLFNDMLRLGVRPNETTWVIVIS-ACSFRADPSLTRSLVKLIDEKRVRLNCFVKTAL 305
Query: 48 MDLALK---VVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPN 104
+D+ K + S + + + + +T+N +I G+ ++G ++ A +L + M ++++V
Sbjct: 306 LDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVV-- 363
Query: 105 VRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSL--- 161
++ +LI GY+ A ++M+ G + T+I L G M + L
Sbjct: 364 --SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEV--TMISVLSACGHMADLELGDC 419
Query: 162 LISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLC 221
++ + N+I + Y L R GN+ EA + ++ E +++ S+N L
Sbjct: 420 IVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVV----SYNTLFTAFA 475
Query: 222 RSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
+ + LL+ M G+ PD VT+ S++ + G ++ ++++ +
Sbjct: 476 ANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
>AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6951349-6952845 REVERSE
Length = 498
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 6/225 (2%)
Query: 139 NSVIYNTVIHWLYVEGDMEGVSLLISSMVDN-RIPPDKFTYSILTKGLCRNGNVNEAFKF 197
N+ +N+++ Y EG+ E V + M + P+ ++Y++L + C G ++EA K
Sbjct: 244 NATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKV 303
Query: 198 HSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK 257
++ ++ D ++N +I LC + + AK+L M ++G+ +T+ L++G+CK
Sbjct: 304 WEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCK 363
Query: 258 EGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX-----XXXXXMNLF 312
G+V++ + VY +M + G + + + +++ GLC + M
Sbjct: 364 AGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYP 423
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
Y L+ C GK+D A M G + TY I+
Sbjct: 424 SRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFID 468
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 141/304 (46%), Gaps = 28/304 (9%)
Query: 8 CKECKLLEAMSVFYRSLK-HGIWPNVVTFN-MIIDVACKMGAM-------------DLAL 52
C + K ++ + R L+ GI + T N +I +V+ + GA D+++
Sbjct: 172 CLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSV 231
Query: 53 KVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEK-DIVPNVRTYATL 111
KM + I+P++ T+N ++ F + G+ M E++ EM E+ PNV +Y L
Sbjct: 232 DEAKKM----IGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVL 287
Query: 112 IDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRI 171
++ Y + EA ++ +EM +G+V + V YNT+I L ++ L M I
Sbjct: 288 MEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGI 347
Query: 172 PPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQ 231
TY L G C+ G+V+ + ++ D + L+ LC ++ G +
Sbjct: 348 ECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLC--DDRDGQRV 405
Query: 232 LLASMYVRGLVPDIVTFGS------LIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNS 285
+ A+ V+ V + + + S L+ C++G ++ A+ + +M+ G KP+ Y +
Sbjct: 406 VEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRA 465
Query: 286 VING 289
I+G
Sbjct: 466 FIDG 469
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 6/251 (2%)
Query: 28 IWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLT 87
I PN TFN ++ + G ++ ++ +ME P+ +YN L+ +C G ++
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREME--EEVGCSPNVYSYNVLMEAYCARGLMS 298
Query: 88 MAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVI 147
AEK+ EM + +V ++ Y T+I G + +A L +M KG+ + Y ++
Sbjct: 299 EAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLV 358
Query: 148 HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLC--RNGN--VNEAFKFHSKILE 203
+ GD++ ++ M D T L +GLC R+G V A + E
Sbjct: 359 NGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVRE 418
Query: 204 NNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVEN 263
+ +L+ LC + A + A M +G P T+ + IDG+ G+ E
Sbjct: 419 AMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEET 478
Query: 264 AVQVYEKMMKS 274
+ + +M +S
Sbjct: 479 SALLAIEMAES 489
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 113/286 (39%), Gaps = 23/286 (8%)
Query: 169 NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSG 228
NR F + +L K + ++ A K+ + + N LI + R S
Sbjct: 156 NRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASN 215
Query: 229 AKQLLASMY-------------VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS- 274
++ ++ + + P+ TF S++ +EG E +++ +M +
Sbjct: 216 GYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEV 275
Query: 275 GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEA 333
G PN+ YN ++ C + +D++ YNT+I G C++ ++ +A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 334 FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
M GI TY L+N CK G + + + M +GF D +T L+
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 394 FSKKCSPEEVIKLHDYMVLKGVI------PHKQTYKAVVSPLLQEG 433
+ V++ D ++K + P + Y+ +V L ++G
Sbjct: 396 LCDDRDGQRVVEAAD--IVKDAVREAMFYPSRNCYELLVKRLCEDG 439
>AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G15010.1); Has
14980 Blast hits to 5082 proteins in 161 species: Archae
- 0; Bacteria - 2; Metazoa - 156; Fungi - 253; Plants -
14070; Viruses - 0; Other Eukaryotes - 499 (source: NCBI
BLink). | chr5:17618948-17620588 FORWARD
Length = 546
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 132/311 (42%), Gaps = 39/311 (12%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
A+ +F S G+ + +FN ++ C+ + A V + + +I DS +YN
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK----GNIPFDSCSYN 259
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
+I G+ K+G++ EK+ EM+E P+ +Y+ LI+G R + ++ + D + K
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK 319
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
G V ++ +YN +I D + M+D P+ TYS L GL + V++A
Sbjct: 320 GNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDA 379
Query: 195 FKFHSKILENNLIE-----------------------------------DAFSHNILINY 219
+ ++L ++ ++ +L+
Sbjct: 380 LEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKR 439
Query: 220 LCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPN 279
L R + M G D+ + ++DG C G++ENAV V E+ M+ G PN
Sbjct: 440 LSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPN 499
Query: 280 LVLYNSVINGL 290
+Y+ + + L
Sbjct: 500 RFVYSRLSSKL 510
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 2/260 (0%)
Query: 133 KKG-LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
KKG + +S YN +I G++E + ++ MV++ PD +YS L +GL R G +
Sbjct: 247 KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRI 306
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
N++ + I + DA +N +I + + + + M P++ T+ L
Sbjct: 307 NDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKL 366
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
+ G K V +A++++E+M+ G P L S + LC
Sbjct: 367 VSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGC 426
Query: 312 -FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
Y L+ GK M+ +G ++ Y +++ LC +GH++ A
Sbjct: 427 RISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVL 486
Query: 371 LMKVMILQGFVPDYITYTIL 390
+M+ + +GF P+ Y+ L
Sbjct: 487 VMEEAMRKGFCPNRFVYSRL 506
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%)
Query: 197 FHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHC 256
F + E + +D S+++++ L R S +L M G+ PD+ +D
Sbjct: 138 FDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFV 197
Query: 257 KEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVIT 316
+ V A++++E+ G K + +N+++ LC+ FD +
Sbjct: 198 RVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCS 257
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
YN +I+G+ G+++E M +G + +Y+ LI L + G I + E+ +
Sbjct: 258 YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIK 317
Query: 377 LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
+G VPD Y +I +F +E ++ + M+ + P+ +TY +VS L++
Sbjct: 318 HKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIK 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
Query: 212 SHNILINYLCRSNNLSGAKQLLASMYVRGLVP-DIVTFGSLIDGHCKEGNVENAVQVYEK 270
S N L+ LC +++S AK + + +G +P D ++ +I G K G VE +V ++
Sbjct: 223 SFNALLRCLCERSHVSAAKSVFNAK--KGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKE 280
Query: 271 MMKSGEKPNLVLYNSVINGLCKE-EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGK 329
M++SG P+ + Y+ +I GL + N+ D YN +I + ++
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 330 IDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
DE+ + M + N TY+ L++ L K + A E+ + M+ +G +P T
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPT----TG 396
Query: 390 LITSFSKK-CS---PEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
L+TSF K CS P + ++ G + YK ++ L + G
Sbjct: 397 LVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFG 444
>AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4903012-4904229 FORWARD
Length = 405
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 134/333 (40%), Gaps = 38/333 (11%)
Query: 98 EKDIVPNVRTYATLIDGYSRAR---SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG 154
KD P YA +I+ + +A+ +EE R ++ K+ YN + + + G
Sbjct: 88 RKDYQPTESLYALMINKFGQAKMYDEIEEVMRTI-KLEKRCRFSEEFFYNLMRIYGNLAG 146
Query: 155 DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHN 214
+ ++ M D P +++ + L +E K + + DA N
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
ILI LC S NL A QLL + P+++TF LI G C +G E A ++ E+M K
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 275 GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAF 334
+P+ + +N +I+GL K+ G+++E
Sbjct: 267 RIEPDTITFNILISGLRKK----------------------------------GRVEEGI 292
Query: 335 AFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
MK G N TY ++ L +AKE+M MI G P +++Y ++
Sbjct: 293 DLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGL 352
Query: 395 SKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
+ S E+ + MV G +P + VV
Sbjct: 353 CETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 3/238 (1%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
A+ + + G WP+ +FN I+++ D K+ + V D+ N
Sbjct: 150 RAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGV---EIDACCLN 206
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
LI G C+ G L A +L +E ++ PNV T++ LI G+ EEAF+L + M K+
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
+ +++ +N +I L +G +E L+ M P+ TY + GL EA
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
+ S+++ + S+ ++ LC + ++ +L M G VP + + ++
Sbjct: 327 KEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 1/175 (0%)
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITY 317
G + A+++ M G P+ +N ++N L + + + D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
N LI G C SG ++ A N T++ LI C G ++A +L++ M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 378 QGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
+ PD IT+ ILI+ KK EE I L + M +KG P+ TY+ V+ LL +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I LC+ L A+ + + PNV+TF+ +I C G + A K++ +ME
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME- 264
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
I PD+IT+N LI G K G++ L M K PN TY ++ G +
Sbjct: 265 --KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKR 322
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
EA + +M+ G+ + + Y ++ L + + ++ MV++ P +
Sbjct: 323 NLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%)
Query: 316 TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM 375
++N ++N ++ DE + G+ + N LI LC+ G+++ A +L+
Sbjct: 169 SFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEF 228
Query: 376 ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
Q P+ +T++ LI F K EE KL + M + + P T+ ++S L ++G
Sbjct: 229 PQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKG 286
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 194/423 (45%), Gaps = 34/423 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSL-----KHGIWPNVVTFNMIIDVACKMGAMDLALKVV 55
N V+ +CK C L+ S F R + K G+ V + + D+ K G +D A KV
Sbjct: 173 NFVVPNVCKACGALK-WSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVF 231
Query: 56 SKMEVMSVYSIRPD--SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLID 113
++ PD ++ +N L+ G+ + GK A +L ++M ++ + P T +T +
Sbjct: 232 DEI---------PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLS 282
Query: 114 GYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPP 173
+ +EE + + G+ +++++ +++++ G +E ++ M +
Sbjct: 283 ASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK---- 338
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
D T++++ G + G V +A + L D + L++ R+ NL K++
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 234 ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI-----N 288
DIV +++D + K G++ +A +V++ ++ +L+L+N+++ +
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAES 454
Query: 289 GLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAAN 348
GL E +VIT+N +I +G++DEA M+++GI N
Sbjct: 455 GLSGEALRLFYGMQLEGVPP----NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPN 510
Query: 349 HATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHD 408
++ T++N + + G ++A ++ M G P+ + T+ +++ + S +H
Sbjct: 511 LISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHG 570
Query: 409 YMV 411
Y++
Sbjct: 571 YII 573
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 192/437 (43%), Gaps = 30/437 (6%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
V+ YA +C LE V + L+ NV ++ II V C++G + AL +M
Sbjct: 114 VIFYA---KCDALEIAEVLFSKLRV---RNVFSWAAIIGVKCRIGLCEGALMGFVEMLEN 167
Query: 62 SVYSIRPDSITYNCLIGGFCKM-GKLTMAE---KLKNEMMEKDIVPNVRTYATLIDGYSR 117
++ PD N ++ CK G L + + +++ + V ++L D Y +
Sbjct: 168 EIF---PD----NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGK 220
Query: 118 ARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFT 177
L++A ++ DE+ + N+V +N ++ G E L S M + P + T
Sbjct: 221 CGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVT 276
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
S G V E + H+ + N + D L+N+ C+ + A+ + M+
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF 336
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
+ D+VT+ +I G+ ++G VE+A+ + + M K + V ++++ + E
Sbjct: 337 EK----DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLK 392
Query: 298 XXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
+ D++ +T+++ Y G I +A + ++ + + +NTL+
Sbjct: 393 LGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKK----VFDSTVEKDLILWNTLL 448
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
+ G +A L M L+G P+ IT+ ++I S + +E + M G+I
Sbjct: 449 AAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGII 508
Query: 417 PHKQTYKAVVSPLLQEG 433
P+ ++ +++ ++Q G
Sbjct: 509 PNLISWTTMMNGMVQNG 525
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 165/386 (42%), Gaps = 42/386 (10%)
Query: 64 YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEE 123
+S D + + ++ + K G + A+K+ + +EKD++ + TL+ Y+ + E
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLI----LWNTLLAAYAESGLSGE 459
Query: 124 AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
A RL M +G+ N + +N +I L G ++ + M + I P+ +++ +
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN 519
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
G+ +NG EA F K+ E+ L +AFS + ++ +L + + +
Sbjct: 520 GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHS 579
Query: 244 DIVTF-GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
+V+ SL+D + K G++ A +V+ + S L L N++I+
Sbjct: 580 SLVSIETSLVDMYAKCGDINKAEKVFGSKLYS----ELPLSNAMISAYALYGNLKEAIAL 635
Query: 303 XXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFA-FSFAMKNAGIAANHATYNTLINFLC 360
+ L D IT +++ ++G I++A F+ + + Y +++ L
Sbjct: 636 YRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLA 695
Query: 361 KLGHIQQAKELMKVM-------ILQGFVP-----------DYIT-------------YTI 389
G ++A L++ M ++Q V DY++ Y
Sbjct: 696 SAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVT 755
Query: 390 LITSFSKKCSPEEVIKLHDYMVLKGV 415
+ +++ + S +EV+K+ + M KG+
Sbjct: 756 ISNAYAVEGSWDEVVKMREMMKAKGL 781
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/392 (18%), Positives = 159/392 (40%), Gaps = 54/392 (13%)
Query: 24 LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
++H ++V + ++D+ K G++ A KV ++ D I +N L+ + +
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-------TVEKDLILWNTLLAAYAES 454
Query: 84 GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIY 143
G A +L M + + PNV T+ +I R ++EA + +M G++ N + +
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISW 514
Query: 144 NTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILE 203
T+++ + G E L + M ++ + P+ F+ ++ +++ H I+
Sbjct: 515 TTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR 574
Query: 204 NNLIEDAFS-HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVE 262
N S L++ + +++ A+++ S L ++ ++I + GN++
Sbjct: 575 NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSK----LYSELPLSNAMISAYALYGNLK 630
Query: 263 NAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLIN 322
A+ +Y + G KP D IT +++
Sbjct: 631 EAIALYRSLEGVGLKP----------------------------------DNITITNVLS 656
Query: 323 GYCNSGKIDEAFA-FSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFV 381
++G I++A F+ + + Y +++ L G ++A L++ M F
Sbjct: 657 ACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM---PFK 713
Query: 382 PDYITYTILITSFSKKCSPEEVIKLHDYMVLK 413
PD +I S C+ + +L DY+ K
Sbjct: 714 PD----ARMIQSLVASCNKQRKTELVDYLSRK 741
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 159/417 (38%), Gaps = 75/417 (17%)
Query: 68 PDSITYNCLIGGFCKMGKLTMAEKLKNEM--------------------MEKDIVPNVRT 107
P S +Y + CK G++ A L EM E+D+ +
Sbjct: 33 PSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQI 92
Query: 108 YATLI---DGYSRARSLEEA----FRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM---- 156
+A ++ D Y+R +E + CD + ++ + + V W + G
Sbjct: 93 HARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIG 152
Query: 157 --EGVSLLISSMVDNRIPPDKFT------------YSILTKGL-----------C----- 186
EG + M++N I PD F +S +G+ C
Sbjct: 153 LCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVAS 212
Query: 187 -------RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ G +++A K +I + N A + N L+ ++ A +L + M +
Sbjct: 213 SLADMYGKCGVLDDASKVFDEIPDRN----AVAWNALMVGYVQNGKNEEAIRLFSDMRKQ 268
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
G+ P VT + + G VE Q + + +G + + +L S++N CK
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCK---VGLI 325
Query: 300 XXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
M DV+T+N +I+GY G +++A M+ + + T TL++
Sbjct: 326 EYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA 385
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
+ +++ KE+ I F D + + ++ ++K S + K+ D V K +I
Sbjct: 386 ARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLI 442
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 121/293 (41%), Gaps = 39/293 (13%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
EA+ +FY G+ PNV+T+N+II + G +D A + +M+ + P+ I++
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGII---PNLISWT 515
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRT----------YATL-----IDGY---- 115
++ G + G A +M E + PN + A+L I GY
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN 575
Query: 116 -------SRARSLEEAFRLCDEMMKKGLVMNSVIY------NTVIHWLYVEGDMEGVSLL 162
S SL + + C ++ K V S +Y N +I + G+++ L
Sbjct: 576 LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIAL 635
Query: 163 ISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH-NILINYLC 221
S+ + PD T + + G++N+A + + I+ ++ H ++++ L
Sbjct: 636 YRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLA 695
Query: 222 RSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
+ A +L+ M + PD SL+ K+ E + K+++S
Sbjct: 696 SAGETEKALRLIEEMPFK---PDARMIQSLVASCNKQRKTELVDYLSRKLLES 745
>AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22704630-22706126 REVERSE
Length = 498
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 6/262 (2%)
Query: 32 VVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEK 91
V FN+++ C M A + K+ PD T N L+ GF + G +T E
Sbjct: 176 VDEFNILLRAFCTEREMKEARSIFEKLHS----RFNPDVKTMNILLLGFKEAGDVTATEL 231
Query: 92 LKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLY 151
+EM+++ PN TY IDG+ + R+ EA RL ++M + + I T+IH
Sbjct: 232 FYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSG 291
Query: 152 VEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAF 211
V + L + + PD Y+ L L + G+V+ A K ++ E + D+
Sbjct: 292 VARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSV 351
Query: 212 S-HNILINYL-CRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
+ H++ I + + +G + M R LVP T L+ C G V + +++
Sbjct: 352 TFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWK 411
Query: 270 KMMKSGEKPNLVLYNSVINGLC 291
M++ G P+ + LC
Sbjct: 412 YMLEKGYCPHGHALELLTTALC 433
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 10/280 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
N+++ A C E ++ EA S+F + L P+V T N+++ +G + +++
Sbjct: 180 NILLRAFCTEREMKEARSIFEK-LHSRFNPDVKTMNILL-----LGFKEAGDVTATELFY 233
Query: 59 EVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRA 118
M +P+S+TY I GFCK A +L +M D V+ TLI G A
Sbjct: 234 HEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVA 293
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
R+ +A +L DE+ K+GL + YN ++ L GD+ G ++ M + I PD T+
Sbjct: 294 RNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTF 353
Query: 179 SILTKGLCRNGN--VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
+ G+ ++ N +++ K+ E +L+ + +L+ C + ++ L M
Sbjct: 354 HSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYM 413
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE 276
+G P L C +A + + ++ G
Sbjct: 414 LEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGR 453
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 149/411 (36%), Gaps = 86/411 (20%)
Query: 29 WPNVVTFNMIIDVACKM---GAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGK 85
+PN+++F + + CK+ G+ + L+ KME ++ + +N L+ FC +
Sbjct: 133 YPNLLSFKSMSILLCKIAKFGSYEETLEAFVKME-KEIFRKKFGVDEFNILLRAFCTERE 191
Query: 86 LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNT 145
+ A + E + P+V+T L+ G+ A
Sbjct: 192 MKEARSI-FEKLHSRFNPDVKTMNILLLGFKEA--------------------------- 223
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
GD+ L MV P+ TY I G C+ N EA + +
Sbjct: 224 --------GDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDM---- 271
Query: 206 LIEDAFSHNILINYLCRSNNLSG-------AKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
D +I + L + SG A+QL + RGL PD + +L+ K
Sbjct: 272 ---DRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKC 328
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYN 318
G+V A++V ++M + G +P+ V ++S+ G+ K +
Sbjct: 329 GDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFG--------------------- 367
Query: 319 TLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
NG C + MK + T L+ C G + +L K M+ +
Sbjct: 368 --FNGVCE---------YYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEK 416
Query: 379 GFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
G+ P +L T+ + + + V +G + Y+ + + L
Sbjct: 417 GYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSL 467
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 195/465 (41%), Gaps = 46/465 (9%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+IYAL K +++ VF R HG+ P+ + V ++ A KV ++ +S
Sbjct: 87 LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELS----AFKVGKQIHCVS 142
Query: 63 -VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
V + D+ + + + G++ A K+ + M +KD+V T + L+ Y+R L
Sbjct: 143 CVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVV----TCSALLCAYARKGCL 198
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
EE R+ EM G+ N V +N ++ G + ++ + PD+ T S +
Sbjct: 199 EEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSV 258
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQL--------- 232
+ + +N H +++ L++D + +I+ +S ++ G L
Sbjct: 259 LPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEA 318
Query: 233 -LASMYVRGLVP---------------------DIVTFGSLIDGHCKEGNVENAVQVYEK 270
+ + Y+ GL ++V++ S+I G + G A++++ +
Sbjct: 319 GVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFRE 378
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD-VITYNTLINGYCNSGK 329
M +G KPN V S++ ++L D V + LI+ Y G+
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGR 438
Query: 330 IDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
I+ S + N N +N+L+N G ++ + + ++ PD+I++T
Sbjct: 439 IN----LSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTS 494
Query: 390 LITSFSKKCSPEEVIKLHDYMVLK-GVIPHKQTYKAVVSPLLQEG 433
L+++ + +E K M + G+ P + Y +V+ L + G
Sbjct: 495 LLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539
>AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat
336) | chr1:22865326-22866552 REVERSE
Length = 408
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 15/294 (5%)
Query: 2 VVIYALCKECKLLE-AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+V+YA + +L+ ++ VF K I V + N ++ AC + A D +E+
Sbjct: 123 IVLYA---QANMLDHSLRVFRDLEKFEISRTVKSLNALL-FAC-LVAKDYKEAKRVYIEM 177
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+Y I PD TYN +I FC+ G + + + EM K I PN ++ +I G+
Sbjct: 178 PKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDK 237
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
+E ++ M +G+ + YN I L + L+ M+ + P+ TYS
Sbjct: 238 SDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSH 297
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L G C + EA K ++ D+ + LI YLC+ + A L +
Sbjct: 298 LIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKN 357
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAV----QVYEKMMKSGEKPNLVLYNSVINGL 290
VP SL++G K+ VE A QV EK + N+ L+N V L
Sbjct: 358 WVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTR-----NVELWNEVEAAL 406
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 6/248 (2%)
Query: 48 MDLALKVVSKMEVMSV-YSIRP-DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNV 105
+D +L+V +E + +++ +++ + CL+ K K E K +E P++
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIE----PDL 187
Query: 106 RTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISS 165
TY +I + + S ++ + EM +KG+ NS + +I Y E + V +++
Sbjct: 188 ETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAM 247
Query: 166 MVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNN 225
M D + TY+I + LC+ EA +L + + +++ LI+ C ++
Sbjct: 248 MKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDD 307
Query: 226 LSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNS 285
AK+L M RG PD + +LI CK G+ E A+ + ++ M+ P+ + S
Sbjct: 308 FEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKS 367
Query: 286 VINGLCKE 293
++NGL K+
Sbjct: 368 LVNGLAKD 375
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 1/199 (0%)
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D ++N +I C S + S + ++A M +G+ P+ +FG +I G E + +V
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNS 327
M G + YN I LCK + + + +TY+ LI+G+CN
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
+EA M N G + Y TLI +LCK G + A L K + + +VP +
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIM 365
Query: 388 TILITSFSKKCSPEEVIKL 406
L+ +K EE +L
Sbjct: 366 KSLVNGLAKDSKVEEAKEL 384
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 233 LASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
+ MY G+ PD+ T+ +I C+ G+ ++ + +M + G KPN + +I+G
Sbjct: 177 MPKMY--GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYA 234
Query: 293 EEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHAT 351
E+ + V TYN I C K EA A M +AG+ N T
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT 294
Query: 352 YNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV 411
Y+ LI+ C ++AK+L K+M+ +G PD Y LI K E + L +
Sbjct: 295 YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Query: 412 LKGVIPHKQTYKAVVSPLLQEG 433
K +P K++V+ L ++
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDS 376
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+ I +LCK K EA ++ L G+ PN VT++ +I C + A K+ ++
Sbjct: 261 NIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKL---FKI 317
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M +PDS Y LI CK G A L E MEK+ VP+ +L++G ++
Sbjct: 318 MVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSK 377
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTV 146
+EEA L + +K+ N ++N V
Sbjct: 378 VEEAKELIGQ-VKEKFTRNVELWNEV 402
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 7/270 (2%)
Query: 168 DNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN--NLIEDAFSHNILINYLCRSNN 225
D RI D+ +S + L + + +EN +L + F+ + ++ Y ++N
Sbjct: 75 DCRI--DRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLY-AQANM 131
Query: 226 LSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS-GEKPNLVLYN 284
L + ++ + + + + +L+ + + A +VY +M K G +P+L YN
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 191
Query: 285 SVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNA 343
+I C+ + + ++ +I+G+ K DE MK+
Sbjct: 192 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 251
Query: 344 GIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEV 403
G+ +TYN I LCK ++AK L+ M+ G P+ +TY+ LI F + EE
Sbjct: 252 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 311
Query: 404 IKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
KL MV +G P + Y ++ L + G
Sbjct: 312 KKLFKIMVNRGCKPDSECYFTLIYYLCKGG 341
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 164/377 (43%), Gaps = 52/377 (13%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+I K+ LEA+ ++++ + GI P+ T ++ + + L V +E
Sbjct: 201 NVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIER 260
Query: 61 MS-VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
VYS + I N L+ + K + +A++ + M +KD+ R++ T++ G+ R
Sbjct: 261 RGPVYS--SNLILSNALLDMYFKCKESGLAKRAFDAMKKKDM----RSWNTMVVGFVRLG 314
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEG-DMEGVSLLISSM-VDNRIPPDKFT 177
+E A + D+M K+ LV +N+++ +G D V L M + ++ PD+ T
Sbjct: 315 DMEAAQAVFDQMPKRDLVS----WNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVT 370
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
L G NG ++ H ++ L DAF + LI+ C+ + A + +
Sbjct: 371 MVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT 430
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
+ D+ + S+I G GN + A+Q++ +M + G PN V
Sbjct: 431 EK----DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNV---------------- 470
Query: 298 XXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNA-GIAANHATYNTLI 356
T ++ +SG ++E MK+ G Y +L+
Sbjct: 471 ------------------TLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLV 512
Query: 357 NFLCKLGHIQQAKELMK 373
+ LC+ G +++AK++++
Sbjct: 513 DLLCRAGRVEEAKDIVQ 529
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 134/304 (44%), Gaps = 29/304 (9%)
Query: 139 NSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFH 198
N +YNT+I V L SSM+ +R+ PD+ T+ L K + ++E + H
Sbjct: 99 NVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKA---SSFLSEVKQIH 153
Query: 199 SKILENNLIE-DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK 257
I+ + + + N L+ + N A+++ A M PD+ +F +I G+ K
Sbjct: 154 CHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPH----PDVSSFNVMIVGYAK 209
Query: 258 EGNVENAVQVYEKMMKSGEKPNLVLYNSVI---NGLCKEEXXXXXXXXXXXXXXMNLFDV 314
+G A+++Y KM+ G +P+ S++ L + ++
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 315 ITYNTLINGY--C-NSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
I N L++ Y C SG AF AMK + ++NT++ +LG ++ A+ +
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFD---AMKKKDM----RSWNTMVVGFVRLGDMEAAQAV 322
Query: 372 MKVMILQGFVPDYITYTILITSFSKKCSPEEVIK--LHDYMVLKGVIPHKQTYKAVVSPL 429
M + D +++ L+ +SKK + ++ ++ +++ V P + T +++S
Sbjct: 323 FDQMPKR----DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGA 378
Query: 430 LQEG 433
G
Sbjct: 379 ANNG 382
>AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30285358-30286704 REVERSE
Length = 448
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 9/293 (3%)
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIP-PDKFTYSILTKGLCRNGNVNE 193
G + +N VI L + E LI+ M+ N P+ T+ I+ K V E
Sbjct: 76 GFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQE 135
Query: 194 AFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG---LVPDIVTFGS 250
A + K+ + NL ++ +N L++ LC ++ A++L V G V +
Sbjct: 136 AIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNL 194
Query: 251 LIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN 310
++ G K G + ++KM G +L Y+ ++ +CK
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 311 L-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
+ DV+ YNT+I S ++ M+ G N AT+NT+I LC+ G ++ A
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 314
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
++ M +G PD ITY L FS+ P E++ L M+ GV P TY
Sbjct: 315 RMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTY 364
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 153/352 (43%), Gaps = 8/352 (2%)
Query: 34 TFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLK 93
TFN +ID+ K +++ ++++M + + S+ P+ +T+ + + + A
Sbjct: 83 TFNRVIDILGKYFEFEISWALINRM-IGNTESV-PNHVTFRIVFKRYVTAHLVQEAIDAY 140
Query: 94 NEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC--DEMMKKGL-VMNSVIYNTVIHWL 150
+++ + ++ Y L+D + + EA LC ++ G V N+ I+N ++
Sbjct: 141 DKLDDFNLRDETSFY-NLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGW 199
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
G M + D F+YSI +C++G +A K + ++ + D
Sbjct: 200 SKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDV 259
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
++N +I + S + ++ M RG P++ T ++I C++G + +A ++ ++
Sbjct: 260 VAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDE 319
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKI 330
M K G +P+ + Y + + L K D TY L+ + G +
Sbjct: 320 MPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMD--TYVMLMRKFERWGFL 377
Query: 331 DEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
MK +G + A YN +I+ L + G + A+E + MI +G P
Sbjct: 378 QPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 115/271 (42%), Gaps = 19/271 (7%)
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFS------HNILINYLCRSNNLS 227
D+ ++ L LC + +V EA + N+I + FS HN+++ +
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEEL---CFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWG 206
Query: 228 GAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI 287
K+ M G+ D+ ++ +D CK G AV++Y++M K ++V YN+VI
Sbjct: 207 KCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVI 266
Query: 288 NGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIA 346
+ + +V T+NT+I C G++ +A+ M G
Sbjct: 267 RAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQ 326
Query: 347 ANHATYNTLINFLCKLGHIQQAKELMKV---MILQGFVPDYITYTILITSFSKKCSPEEV 403
+ TY +C +++ E++ + MI G P TY +L+ F + + V
Sbjct: 327 PDSITY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPV 380
Query: 404 IKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
+ + M G P Y AV+ L+Q+G+
Sbjct: 381 LYVWKTMKESGDTPDSAAYNAVIDALIQKGM 411
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 112/267 (41%), Gaps = 10/267 (3%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
N N+I+ K+G + KM+ V D +Y+ + CK GK A
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTK---DLFSYSIYMDIMCKSGKPWKAV 244
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
KL EM + + +V Y T+I ++ +E R+ EM ++G N +NT+I L
Sbjct: 245 KLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLL 304
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
+G M ++ M PD TY L R +E +++ + +
Sbjct: 305 CEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKM 361
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
++ +L+ R L + +M G PD + ++ID ++G ++ A + E+
Sbjct: 362 DTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEE 421
Query: 271 MMKSG----EKPNLVLYNSVINGLCKE 293
M++ G +P LV + +C+E
Sbjct: 422 MIERGLSPRRRPELVEKSLDETLVCRE 448
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 159/360 (44%), Gaps = 52/360 (14%)
Query: 57 KMEVMSVYS-----IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATL 111
KME + +++ R DS T +I +G L +++ + ++ ++ +TL
Sbjct: 300 KMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTL 359
Query: 112 IDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRI 171
+D YS+ S EA +L E+ ++++ N++I + G ++ + + + +
Sbjct: 360 LDMYSKCGSPMEACKLFSEVES----YDTILLNSMIKVYFSCGRIDDAKRVFERIENKSL 415
Query: 172 PPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQ 231
+++ +T G +NG E ++ ++ + +L D S + +I+ ++L +Q
Sbjct: 416 ----ISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQ 471
Query: 232 LLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC 291
+ A + GL D V SLID +CK G VE+ +V++ M+KS E P
Sbjct: 472 VFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVP------------- 518
Query: 292 KEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHAT 351
+N++I+GY +G+ EA M AGI T
Sbjct: 519 -------------------------WNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQIT 553
Query: 352 YNTLINFLCKLGHIQQAKELMKVM-ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYM 410
+ ++ G +++ ++L + M + GFVPD ++ ++ ++ EE I L + M
Sbjct: 554 FMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEM 613
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 113/522 (21%), Positives = 203/522 (38%), Gaps = 125/522 (23%)
Query: 17 MSVFYRSLKHGIWPNVV---------TFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIR 67
+ ++ RS K GI N+ ++N +I+ G +L+ M
Sbjct: 69 LQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMP-------E 121
Query: 68 PDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRL 127
D ++N ++ GF K G+L++A +L N M EKD+V T +L+ GY EEA RL
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVV----TLNSLLHGYILNGYAEEALRL 177
Query: 128 CDEM------------MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMV-------D 168
E+ +K + ++ IH + G +E S + SS+V D
Sbjct: 178 FKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD 237
Query: 169 NRIP---------PDKFTYSILTKGLCRNGNVNEAFKFHSK------ILENNLIEDAFSH 213
R+ PD + S L G G VNE+ + IL N++I ++
Sbjct: 238 LRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIAN 297
Query: 214 NILINYLCRSNN------------------------LSGAKQLLASMYVRGLVPDIVTFG 249
N+ + L N L KQ+ GL+ DIV
Sbjct: 298 NMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAS 357
Query: 250 SLIDGHCKEGN-------------------------------VENAVQVYEKMMKSGEKP 278
+L+D + K G+ +++A +V+E++ E
Sbjct: 358 TLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERI----ENK 413
Query: 279 NLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFS 337
+L+ +NS+ NG + ++L D ++ +++I+ C S E
Sbjct: 414 SLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISA-CASISSLELGEQV 472
Query: 338 FAMKN-AGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
FA G+ ++ ++LI+ CK G ++ + + M+ VP + +I+ ++
Sbjct: 473 FARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVP----WNSMISGYAT 528
Query: 397 KCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSP-----LLQEG 433
E I L M + G+ P + T+ V++ L++EG
Sbjct: 529 NGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEG 570
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 175/396 (44%), Gaps = 31/396 (7%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
I LC + L EA+ + R+ K P T+ +I V + A++ KV E +
Sbjct: 60 AIDVLCGQKLLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKV---HEHIR 112
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
P + +N L+ + K G L A K+ +EM +D+ ++ +++GY+ LE
Sbjct: 113 TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLC----SWNVMVNGYAEVGLLE 168
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIP---PDKFTYS 179
EA +L DEM +K +S + ++ YV+ D +L++ S++ R+P P+ FT S
Sbjct: 169 EARKLFDEMTEK----DSYSWTAMVT-GYVKKDQPEEALVLYSLM-QRVPNSRPNIFTVS 222
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
I + + H I+ L D + L++ + + A+ + + +
Sbjct: 223 IAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK 282
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
D+V++ S+ID + K ++ +++ S E+PN + V+N C +
Sbjct: 283 ----DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNA-CADLTTEEL 337
Query: 300 XXXXXXXXXMNLFDVITY--NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
FD ++ ++L++ Y G I+ A + + + ++ +LI
Sbjct: 338 GKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKH----VVDGCPKPDLVSWTSLIG 393
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
+ G +A + +++ G PD++T+ ++++
Sbjct: 394 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSA 429
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 168/432 (38%), Gaps = 85/432 (19%)
Query: 35 FNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKN 94
F IDV C + A++++ + + +P + TY LI + L +K+
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAK-------KPPASTYCNLIQVCSQTRALEEGKKVHE 109
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH------ 148
+ VP + + L+ Y++ SL +A ++ DEM + L +V+ N
Sbjct: 110 HIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEE 169
Query: 149 ---------------WL-----YVEGDMEGVSLLISSMVDNRIP---PDKFTYSILTKGL 185
W YV+ D +L++ S++ R+P P+ FT SI
Sbjct: 170 ARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLM-QRVPNSRPNIFTVSIAVAAA 228
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
+ + H I+ L D + L++ + + A+ + + + D+
Sbjct: 229 AAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK----DV 284
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXX 305
V++ S+ID + K ++ +++ S E+PN + V+N
Sbjct: 285 VSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACA-------------- 330
Query: 306 XXXMNLFDVIT--YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLG 363
D+ T ++GY D +SFA ++L++ K G
Sbjct: 331 -------DLTTEELGKQVHGYMTRVGFD---PYSFAS------------SSLVDMYTKCG 368
Query: 364 HIQQAKELMKVMILQGFV-PDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTY 422
+I+ AK ++ G PD +++T LI ++ P+E +K D ++ G P T+
Sbjct: 369 NIESAKH-----VVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTF 423
Query: 423 KAVVSPLLQEGV 434
V+S G+
Sbjct: 424 VNVLSACTHAGL 435
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 150/384 (39%), Gaps = 51/384 (13%)
Query: 24 LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
++ G+ + V ++ ++D+ K G +D A + K+ + D +++ +I + K
Sbjct: 245 VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-------VEKDVVSWTSMIDRYFKS 297
Query: 84 GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIY 143
+ L +E++ PN T+A +++ + + E ++ M + G S
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFAS 357
Query: 144 NTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILE 203
++++ G++E +VD PD +++ L G +NG +EA K+ +L+
Sbjct: 358 SSLVDMYTKCGNIESAK----HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 413
Query: 204 NNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV----RGLVPDIVTFGSLIDGHCKEG 259
+ D H +N L + ++ L Y L + L+D + G
Sbjct: 414 SGTKPD---HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSG 470
Query: 260 NVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNT 319
E V +M KP+ L+ SV+ G + + +TY T
Sbjct: 471 RFEQLKSVISEMPM---KPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVT 527
Query: 320 LINGYCNSGKIDEAFAFSFAMKNAG-------------------IAAN--HATYNTLINF 358
+ N Y +GK +E M+ G IAA+ H YN ++ F
Sbjct: 528 MANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEF 587
Query: 359 LCKLGHIQQAKELMKVMILQGFVP 382
L +EL K M +G+VP
Sbjct: 588 L---------RELRKKMKEEGYVP 602
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 142/317 (44%), Gaps = 19/317 (5%)
Query: 118 ARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFT 177
AR + + +C G V + ++N VI D LL+ M++N + DKF+
Sbjct: 59 ARCVFHEYHVCS--FSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFS 116
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
S++ K R G V + H + + L D F N LI + L ++Q+ M
Sbjct: 117 LSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMP 176
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
R D V++ S+IDG+ K G + +A ++++ M E NL+ +NS+I+G +
Sbjct: 177 KR----DSVSYNSMIDGYVKCGLIVSARELFDLM--PMEMKNLISWNSMISGYA--QTSD 228
Query: 298 XXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
M D+I++N++I+GY G+I++A M + T+ T+I+
Sbjct: 229 GVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV----VTWATMID 284
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKG-VI 416
KLG + AK L M + D + Y ++ + + E +++ M + ++
Sbjct: 285 GYAKLGFVHHAKTLFDQMPHR----DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLL 340
Query: 417 PHKQTYKAVVSPLLQEG 433
P T V+ + Q G
Sbjct: 341 PDDTTLVIVLPAIAQLG 357
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 171/384 (44%), Gaps = 65/384 (16%)
Query: 31 NVVTFN-MIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
N++++N MI A +D+A K+ + M D I++N +I G+ K G++ A
Sbjct: 212 NLISWNSMISGYAQTSDGVDIASKLFADMP-------EKDLISWNSMIDGYVKHGRIEDA 264
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
+ L + M +D+V T+AT+IDGY++ + A L D+M + + V YN+++
Sbjct: 265 KGLFDVMPRRDVV----TWATMIDGYAKLGFVHHAKTLFDQMPHR----DVVAYNSMMAG 316
Query: 150 LYVEGD--MEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI 207
YV+ ME + + ++ + PD T I+ + + G +++A H I+E
Sbjct: 317 -YVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQF- 374
Query: 208 EDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQV 267
YL G K +A LID + K G++++A+ V
Sbjct: 375 -----------YL-------GGKLGVA----------------LIDMYSKCGSIQHAMLV 400
Query: 268 YEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCN 326
+E + E ++ +N++I GL ++L D IT+ ++N +
Sbjct: 401 FEGI----ENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSH 456
Query: 327 SGKIDEA-FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
SG + E F + I Y +++ L + G I+ AK L++ M ++ P+ +
Sbjct: 457 SGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVE---PNDV 513
Query: 386 TYTILITSFS--KKCSPEEVIKLH 407
+ +T+ S K+ E++ H
Sbjct: 514 IWRTFLTACSHHKEFETGELVAKH 537
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 144/338 (42%), Gaps = 48/338 (14%)
Query: 131 MMKKGLVMNSVIY-NTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
M++ V+NS Y N+ I+ L GD + V SSM+ N++ PD FT+ L K
Sbjct: 1 MIRTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQ 60
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
++ H ++L N D + + L+N + L+ A+++ M R D+V +
Sbjct: 61 RLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRER----DVVHWT 116
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKP------------------------------- 278
++I + + G V A + +M G KP
Sbjct: 117 AMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFD 176
Query: 279 -NLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFS 337
++ + NS++N CK + M D++++NT+I+GY + G + E
Sbjct: 177 CDIAVMNSMLNLYCKCD---HVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLL 233
Query: 338 FAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKK 397
+ M+ G+ + T+ ++ + ++ + L ++ GF D T LIT + K
Sbjct: 234 YRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMY-LK 292
Query: 398 CSPEEVIKLHDYMVLKGVIPHKQT--YKAVVSPLLQEG 433
C EE Y VL+ IP+K + ++S L++ G
Sbjct: 293 CGKEEA----SYRVLE-TIPNKDVVCWTVMISGLMRLG 325
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 157/384 (40%), Gaps = 21/384 (5%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
+ +S F L + + P+ TF ++ + + L + ++ V S D +
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSS---DFYISS 85
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
L+ + K G L A K+ EM E+D+V + +I YSRA + EA L +EM +
Sbjct: 86 SLVNLYAKFGLLAHARKVFEEMRERDVVH----WTAMIGCYSRAGIVGEACSLVNEMRFQ 141
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
G+ V T++ L ++ + L V D + + C+ +V +A
Sbjct: 142 GIKPGPV---TLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDA 198
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
++ + +++ S N +I+ N+S +LL M GL PD TFG+ +
Sbjct: 199 KDLFDQMEQRDMV----SWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV 254
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL--CKEEXXXXXXXXXXXXXXMNLF 312
++E ++ +++K+G ++ L ++I C +E
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK----- 309
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
DV+ + +I+G G+ ++A M +G + +++ +LG +
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 373 KVMILQGFVPDYITYTILITSFSK 396
++ G+ D LIT ++K
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAK 393
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 152/374 (40%), Gaps = 80/374 (21%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
V+I L + + +A+ VF L+ G + ++ ++G+ DL V + +
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYV-L 373
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
Y++ D+ N LI + K G L + + M E+D+V ++ +I GY++
Sbjct: 374 RHGYTL--DTPALNSLITMYAKCGHLDKSLVIFERMNERDLV----SWNAIISGYAQNVD 427
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L +A L +EM K + V TV VSLL + +P K + I
Sbjct: 428 LCKALLLFEEMKFK--TVQQVDSFTV------------VSLLQACSSAGALPVGKLIHCI 473
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+ + R +L++ A L++ + L A++ S+ +
Sbjct: 474 VIRSFIR---------------PCSLVDTA-----LVDMYSKCGYLEAAQRCFDSISWK- 512
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
D+V++G LI G+ G + A+++Y + + SG +PN V++ +V++ C
Sbjct: 513 ---DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS-CSH------- 561
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSG-KIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
NG G KI FS +++ G+ NH +++ L
Sbjct: 562 ---------------------NGMVQQGLKI-----FSSMVRDFGVEPNHEHLACVVDLL 595
Query: 360 CKLGHIQQAKELMK 373
C+ I+ A + K
Sbjct: 596 CRAKRIEDAFKFYK 609
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G46100.1); Has
11639 Blast hits to 3936 proteins in 180 species: Archae
- 0; Bacteria - 2; Metazoa - 206; Fungi - 141; Plants -
11004; Viruses - 0; Other Eukaryotes - 286 (source: NCBI
BLink). | chr4:573098-577243 REVERSE
Length = 1110
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 12/234 (5%)
Query: 2 VVIYALCKECKLLE-AMSVFYRSLKHGIWPNVVTFNMIIDV-ACKMGAMDLALKVVSKME 59
+ +YA E KL E +S FY+ L+ P N I+DV G + A ++
Sbjct: 126 IKVYA---EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSR 182
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+ + + P++ +YN L+ FC L++A +L +M+E+D+VP+V +Y LI G+ R
Sbjct: 183 L---HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+ A L D+M+ KG V + T+I L +G + + M+ P +
Sbjct: 240 QVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSN 295
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
L KG C G V EA +++N + + ++I +C + K L
Sbjct: 296 CLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFL 349
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 5/201 (2%)
Query: 95 EMMEKDIVPNVRTYATLIDGYSRARS-LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE 153
+M+E + P + ++D R L++AF L G++ N+ YN ++ +
Sbjct: 144 KMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLN 203
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
D+ L M++ + PD +Y IL +G CR G VN A + +L + D
Sbjct: 204 DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD---- 259
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
LI LC K+ L M +G P L+ G C G VE A V E +MK
Sbjct: 260 RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 319
Query: 274 SGEKPNLVLYNSVINGLCKEE 294
+GE + + VI +C E+
Sbjct: 320 NGETLHSDTWEMVIPLICNED 340
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 141/331 (42%), Gaps = 61/331 (18%)
Query: 77 IGGFCKMGKLTMAEKLKNEMMEKDIV------PNVR----TYATLIDGYSRARSLEEAFR 126
IG ++ KL ++ + ++ K+I PN R ++ LI R R F
Sbjct: 48 IGSPTRVQKLIASQS--DPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGR----YFN 101
Query: 127 LCDEMMKK----GLVMNSVIYNTVIHWLYVEGDM-EGVSLLISSMVD-NRIPPDKFTYSI 180
L D+++ K G + I+ +I +Y E + E V M++ N P K I
Sbjct: 102 LIDDVLAKHRSSGYPLTGEIFTYLIK-VYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRI 160
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
L + G + +AF+ + ++ + S+N+L+ C +++LS A QL M R
Sbjct: 161 LDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERD 220
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+VPD+ ++ LI G C++G V A+++ + M+ G P+
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD--------------------- 259
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
TLI G C+ G DE + M + G + + + N L+ C
Sbjct: 260 -----------------RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFC 302
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILI 391
G +++A ++++V++ G T+ ++I
Sbjct: 303 SFGKVEEACDVVEVVMKNGETLHSDTWEMVI 333
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 7/174 (4%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N+++ A C L A +F + L+ + P+V ++ ++I C+ G ++ A++++ M
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDM-- 251
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
+ + LIGG C G +K EM+ K P+ L+ G+
Sbjct: 252 -----LNKGFVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 306
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPD 174
+EEA + + +MK G ++S + VI + E + E + L + V I D
Sbjct: 307 VEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 40/232 (17%)
Query: 200 KILENNLIEDAFSHNILINYLCRSNN-LSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
K+LE N N +++ L L A +L S + G++P+ ++ L+ C
Sbjct: 144 KMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLN 203
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYN 318
++ A Q++ KM++ P DV +Y
Sbjct: 204 DDLSIAYQLFGKMLERDVVP----------------------------------DVDSYK 229
Query: 319 TLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
LI G+C G+++ A M N G + TLI LC G + K+ ++ MI +
Sbjct: 230 ILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISK 285
Query: 379 GFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLL 430
GF P + L+ F EE + + ++ G H T++ V+ PL+
Sbjct: 286 GFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI-PLI 336
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 12/230 (5%)
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG--LVPDIVTFGS 250
E F + S+ + N SH ILI L R + +LA G L +I T+
Sbjct: 69 EIFDYASQ--QPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTY-- 124
Query: 251 LIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN 310
LI + + E + + KM++ P N +++ L ++
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH 184
Query: 311 --LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQA 368
+ + +YN L+ +C + + A+ M + + +Y LI C+ G + A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 369 KELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
EL+ M+ +GFVPD LI + +E K + M+ KG PH
Sbjct: 245 MELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 290
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 161/389 (41%), Gaps = 68/389 (17%)
Query: 2 VVIYALCKE----CKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSK 57
V Y +C E CK+ M V +VV++ II + G AL SK
Sbjct: 148 VHFYGVCGESRNACKVFGEMPV----------RDVVSWTGIITGFTRTGLYKEALDTFSK 197
Query: 58 MEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR 117
M+V P+ TY C++ ++G L++ + + ++++ + ++ T LID Y +
Sbjct: 198 MDV------EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVK 251
Query: 118 ARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL-YVEGDMEGVSLLISSMVDNRIPPDKF 176
L +A R+ E+ KK + V +N++I L + E E + L + I PD
Sbjct: 252 CEQLSDAMRVFGELEKK----DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
+ + G V+ H IL + D +++ + + A ++ +
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI 367
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXX 296
+ ++ T+ +L+ G G+ +++ +E+M+K G KPNLV
Sbjct: 368 RSK----NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLV--------------- 408
Query: 297 XXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNA--GIAANHATYNT 354
T+ +N C++G +DE + MK+ + Y
Sbjct: 409 -------------------TFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGC 449
Query: 355 LINFLCKLGHIQQAKELMKVMILQGFVPD 383
+I+ LC+ G + +A EL+K M ++ PD
Sbjct: 450 MIDLLCRAGLLDEALELVKAMPVK---PD 475
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 122/293 (41%), Gaps = 15/293 (5%)
Query: 137 VMNSVIYNTVIHWLYVEGDMEGVSLLI-SSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
V++S YNT++ Y D V++ + V N PD FT+ + K + + E
Sbjct: 68 VLSSFSYNTLLS-SYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 196 KFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGH 255
+ H + + +D + N L+++ A ++ M VR D+V++ +I G
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVR----DVVSWTGIITGF 182
Query: 256 CKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE-XXXXXXXXXXXXXXMNLFDV 314
+ G + A+ + KM +PNL Y V+ + +L +
Sbjct: 183 TRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISL 239
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
T N LI+ Y ++ +A ++ + ++N++I+ L ++A +L +
Sbjct: 240 ETGNALIDMYVKCEQLSDAMRVFGELEK----KDKVSWNSMISGLVHCERSKEAIDLFSL 295
Query: 375 M-ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
M G PD T ++++ + + + +H+Y++ G+ A+V
Sbjct: 296 MQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIV 348
>AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750) |
chr3:1956658-1958240 REVERSE
Length = 486
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 162/383 (42%), Gaps = 15/383 (3%)
Query: 22 RSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFC 81
R K W N VT + D+ K + AL+V + + Y +P TY L+
Sbjct: 80 RRSKANGWVNTVT-ETLSDLIAKKQWLQ-ALEVFDMLREQTFY--QPKEGTYMKLLVLLG 135
Query: 82 KMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSV 141
K G+ A+KL +EM+E+ + P V Y L+ Y+R+ +++AF + D+M V
Sbjct: 136 KSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDV 195
Query: 142 I-YNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSK 200
Y+T++ + V L M + I P+ T +I+ G R G ++ K S
Sbjct: 196 FTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSD 255
Query: 201 ILENNLIE-DAFSHNILINYLCRSNNLSGAKQLLASMYVR----GLVPDIVTFGSLIDGH 255
+L + + D ++ NI+++ N+ G ++ S Y + G+ P+ TF LI +
Sbjct: 256 MLVSTACKPDVWTMNIILSVF---GNM-GKIDMMESWYEKFRNFGIEPETRTFNILIGSY 311
Query: 256 CKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDV 314
K+ + V E M K YN++I + D
Sbjct: 312 GKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADT 371
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
T+ LINGY N+G + + I N A YN +I+ K + + + +
Sbjct: 372 KTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIR 431
Query: 375 MILQGFVPDYITYTILITSFSKK 397
M + V D T+ I++ ++ K+
Sbjct: 432 MKERQCVCDSRTFEIMVEAYEKE 454
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 17/260 (6%)
Query: 8 CKECKLLEAMSVFYRSLKHG-IWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSI 66
C + + + Y+ + I PN VT N+++ ++G D KV+S M V + +
Sbjct: 205 CVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVST--AC 262
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
+PD T N ++ F MGK+ M E + I P RT+ LI Y + R ++
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSS 322
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLC 186
+ + M K + YN +I GD + + L M + D T+ L G
Sbjct: 323 VMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYA 382
Query: 187 RNG-------NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
G +V A KF I EN AF +N +I+ ++++L +++ M R
Sbjct: 383 NAGLFHKVISSVQLAAKFE--IPENT----AF-YNAVISACAKADDLIEMERVYIRMKER 435
Query: 240 GLVPDIVTFGSLIDGHCKEG 259
V D TF +++ + KEG
Sbjct: 436 QCVCDSRTFEIMVEAYEKEG 455
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 111/282 (39%), Gaps = 7/282 (2%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
A +F L+ G+ P V + ++ + +D A ++ KM+ S +PD TY+
Sbjct: 143 AQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMK--SFPQCQPDVFTYST 200
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
L+ + + + L EM E+ I PN T ++ GY R ++ ++ +M+
Sbjct: 201 LLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVST 260
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNR---IPPDKFTYSILTKGLCRNGNVN 192
V +I L V G+M + ++ S R I P+ T++IL + +
Sbjct: 261 ACKPDVWTMNII--LSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYD 318
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
+ + + ++N +I + + M G+ D TF LI
Sbjct: 319 KMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLI 378
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
+G+ G + + K N YN+VI+ K +
Sbjct: 379 NGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKAD 420
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 100/253 (39%), Gaps = 3/253 (1%)
Query: 173 PDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQL 232
P + TY L L ++G N A K ++LE L + L+ RSN + A +
Sbjct: 122 PKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSI 181
Query: 233 LASM-YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC 291
L M PD+ T+ +L+ + +Y++M + PN V N V++G
Sbjct: 182 LDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYG 241
Query: 292 KEEXXXXXXXXXXXXXXMNL--FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
+ DV T N +++ + N GKID ++ +N GI
Sbjct: 242 RVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPET 301
Query: 350 ATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDY 409
T+N LI K + +M+ M F TY +I +F+ + + D
Sbjct: 302 RTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQ 361
Query: 410 MVLKGVIPHKQTY 422
M +G+ +T+
Sbjct: 362 MRSEGMKADTKTF 374
>AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: glutamine biosynthetic process; LOCATED IN:
nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G48730.1); Has
17188 Blast hits to 5538 proteins in 167 species: Archae
- 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants -
16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI
BLink). | chr3:19704729-19706417 REVERSE
Length = 497
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 146/378 (38%), Gaps = 38/378 (10%)
Query: 4 IYALCKECKLLEAMSVFYRS-LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
++ + CK + S+ + L G+ P + + +I V K +D A + M+ S
Sbjct: 150 LFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMK--S 207
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
V +PD T+ LI CK+G+ + + + EM + + TY T+IDGY +A E
Sbjct: 208 VSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFE 267
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
E M SV+ + + +G SL PD T + +
Sbjct: 268 E--------------MESVLADMI---------EDGDSL-----------PDVCTLNSII 293
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
N+ + ++S+ + D + NILI ++ ++ M R
Sbjct: 294 GSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFS 353
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
VT+ +I+ K G +E V+ KM G KPN + Y S++N K
Sbjct: 354 LTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSV 413
Query: 303 XXXXXXMN-LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
+ + D +N +IN Y +G + M+ + T+ T+I
Sbjct: 414 LRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTA 473
Query: 362 LGHIQQAKELMKVMILQG 379
G +EL K MI G
Sbjct: 474 HGIFDAVQELEKQMISSG 491
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 35/281 (12%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSV------YSI----------------- 66
P+V TF ++I CK+G DL +V +M + V Y+
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 67 ----------RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYS 116
PD T N +IG + + E + + P++ T+ LI +
Sbjct: 273 LADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFG 332
Query: 117 RARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKF 176
+A ++ + D M K+ + +V YN VI G +E + + M + P+
Sbjct: 333 KAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSI 392
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
TY L + G V + +I+ ++++ D N +IN ++ +L+ K+L M
Sbjct: 393 TYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQM 452
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK-MMKSGE 276
R PD +TF ++I + G + +AVQ EK M+ SGE
Sbjct: 453 EERKCKPDKITFATMIKTYTAHG-IFDAVQELEKQMISSGE 492
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 159/412 (38%), Gaps = 46/412 (11%)
Query: 28 IWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLT 87
+WP V +D A K ALK+ + + Y R + T + G CK +
Sbjct: 106 LWPKAVL--EALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCK--QPD 161
Query: 88 MAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVI 147
A L M+ + + P + Y +LI Y ++ L++AF + M
Sbjct: 162 QASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYM---------------- 205
Query: 148 HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI 207
S+ D + PD FT+++L C+ G + S +LE + +
Sbjct: 206 ----------------KSVSDCK--PDVFTFTVLISCCCKLGRFDLV---KSIVLEMSYL 244
Query: 208 E---DAFSHNILINYLCRSNNLSGAKQLLASMYVRG-LVPDIVTFGSLIDGHCKEGNVEN 263
++N +I+ ++ + +LA M G +PD+ T S+I + N+
Sbjct: 245 GVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRK 304
Query: 264 AVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLIN 322
Y + G +P++ +N +I K +TYN +I
Sbjct: 305 MESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIE 364
Query: 323 GYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
+ +G+I++ MK G+ N TY +L+N K G + + +++ ++ V
Sbjct: 365 TFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVL 424
Query: 383 DYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
D + +I ++ + + +L+ M + P K T+ ++ G+
Sbjct: 425 DTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGI 476
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 5/136 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKH-GIWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
N+VI K ++ E M +R +K+ G+ PN +T+ +++ K G L +K+ S +
Sbjct: 360 NIVIETFGKAGRI-EKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAG---LVVKIDSVLR 415
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+ + D+ +NC+I + + G L ++L +M E+ P+ T+AT+I Y+
Sbjct: 416 QIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHG 475
Query: 120 SLEEAFRLCDEMMKKG 135
+ L +M+ G
Sbjct: 476 IFDAVQELEKQMISSG 491
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 156/355 (43%), Gaps = 34/355 (9%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
N V++N ++ + G +D A +V K+ D++++N +I + K G + A
Sbjct: 438 NTVSWNSLLHGYLESGELDEARRVFDKIP-------EKDAVSWNLIISSYAKKGDMGNAC 490
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
L + M K ++ LI GY R ++ A D M +K N V + T+I
Sbjct: 491 SLFSAMPLKSPA----SWNILIGGYVNCREMKLARTYFDAMPQK----NGVSWITMISGY 542
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN--LIE 208
GD++ L M DK Y + +NG +A K +++LE N +
Sbjct: 543 TKLGDVQSAEELFRLMSKK----DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 598
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D + + +++ + N S + + + G+ D + SLID + K G+ A +++
Sbjct: 599 DEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMF 658
Query: 269 EKMMKSGEKPNLVLYNSVI-----NGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLING 323
+ K + V Y+++I NG+ E +V+T+ L++
Sbjct: 659 SNL----NKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPP----NVVTFTGLLSA 710
Query: 324 YCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
Y +SG + E + +MK+ + + Y +++ L + G +++A EL+K M +Q
Sbjct: 711 YSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQ 765
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 115/230 (50%), Gaps = 8/230 (3%)
Query: 33 VTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKL 92
+ ++ +I + G ALK+ ++M + Y I+PD IT + ++ ++G + +
Sbjct: 564 LVYDAMIACYTQNGKPKDALKLFAQMLERNSY-IQPDEITLSSVVSANSQLGNTSFGTWV 622
Query: 93 KNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYV 152
++ + E I + +LID Y + +AF++ + KK ++V Y+ +I +
Sbjct: 623 ESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK----DTVSYSAMIMGCGI 678
Query: 153 EGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFS 212
G + L ++M++ +IPP+ T++ L +G V E +K + + ++NL A
Sbjct: 679 NGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADH 738
Query: 213 HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVE 262
+ I+++ L R+ L A +L+ SM ++ P+ +G+L+ NVE
Sbjct: 739 YGIMVDMLGRAGRLEEAYELIKSMPMQ---PNAGVWGALLLASGLHNNVE 785
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 166 MVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNN 225
M ++ IPP + + + + N+ + H++ L+N L + L+ R
Sbjct: 364 MHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGY 423
Query: 226 LSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNS 285
+ AK+ + + + V++ SL+ G+ + G ++ A +V++K+ + + V +N
Sbjct: 424 IELAKKAFDDIAEK----NTVSWNSLLHGYLESGELDEARRVFDKI----PEKDAVSWNL 475
Query: 286 VINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGI 345
+I+ K+ M L ++N LI GY N ++ A + AM
Sbjct: 476 IISSYAKK---GDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQ--- 529
Query: 346 AANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIK 405
N ++ T+I+ KLG +Q A+EL ++M + D + Y +I +++ P++ +K
Sbjct: 530 -KNGVSWITMISGYTKLGDVQSAEELFRLMSKK----DKLVYDAMIACYTQNGKPKDALK 584
Query: 406 LHDYMVLKG--VIPHKQTYKAVVSPLLQEG 433
L M+ + + P + T +VVS Q G
Sbjct: 585 LFAQMLERNSYIQPDEITLSSVVSANSQLG 614
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 25 KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMG 84
+HGI + + +ID+ K G A K+ S + + D+++Y+ +I G G
Sbjct: 628 EHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-------KKDTVSYSAMIMGCGING 680
Query: 85 KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYN 144
T A L M+EK I PNV T+ L+ YS + ++E ++ + M L ++ Y
Sbjct: 681 MATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYG 740
Query: 145 TVIHWLYVEGDMEGVSLLISSM 166
++ L G +E LI SM
Sbjct: 741 IMVDMLGRAGRLEEAYELIKSM 762
>AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19763152-19765136 FORWARD
Length = 495
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 138/330 (41%), Gaps = 25/330 (7%)
Query: 103 PNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLL 162
PNV Y LI + + E+A L EM+ +G V+N +Y ++ G + L
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 163 ISSMVDNR-IPPDKFTYSILTKGLCRNGNVNEAFKFHSKI--------------LENNLI 207
+ M + PD TYSIL K + ++ S + +E+ LI
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITFVEMESTLI 267
Query: 208 E-----DAFSHNILINYLCRSNNLSGAKQLLASMYVR----GLVPDIVTFGSLIDGHCKE 258
+ D + +N R+ +G +++ + Y + G+ P+I TF L+D + K
Sbjct: 268 QMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKS 327
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITY 317
GN + V E M K +V YN VI+ + +F +T
Sbjct: 328 GNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTL 387
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
+L+ Y + K D+ ++N+ I + +N L++ ++ + K ++++M
Sbjct: 388 CSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEK 447
Query: 378 QGFVPDYITYTILITSFSKKCSPEEVIKLH 407
+GF PD ITY ++ ++ V +LH
Sbjct: 448 KGFKPDKITYRTMVKAYRISGMTTHVKELH 477
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 27/255 (10%)
Query: 4 IYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSV 63
++A K LL M + GI PN +TF + +M D
Sbjct: 234 VFAFDKVQDLLSDMR------RQGIRPNTITFVEMESTLIQMLGED-------------- 273
Query: 64 YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEE 123
+PDS T N + F G++ M E + I PN+RT+ L+D Y ++ + ++
Sbjct: 274 -DCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKK 332
Query: 124 AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
+ + M K V YN VI GD++ + L M RI P T L +
Sbjct: 333 MSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVR 392
Query: 184 GLCRNGNVNEAFKFHS--KILENNLIE-DAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
G ++A K + +EN+ I D N L++ R + K +L M +G
Sbjct: 393 AY---GRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKG 449
Query: 241 LVPDIVTFGSLIDGH 255
PD +T+ +++ +
Sbjct: 450 FKPDKITYRTMVKAY 464
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 126/312 (40%), Gaps = 28/312 (8%)
Query: 73 YNCLIGGFCKMGKL----TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
Y L+ + + G+ T+ E++K+ + P+V TY+ LI + + + ++ L
Sbjct: 188 YTALVSAYSRSGRFDAAFTLLERMKSS---HNCQPDVHTYSILIKSFLQVFAFDKVQDLL 244
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
+M ++G+ N++ + +E S LI + ++ PD +T + + N
Sbjct: 245 SDMRRQGIRPNTITF------------VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGN 292
Query: 189 GNV----NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD 244
G + N KF S +E N+ + NIL++ +S N ++ M
Sbjct: 293 GQIEMMENCYEKFQSSGIEPNI----RTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWT 348
Query: 245 IVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXX 304
IVT+ +ID + G+++ ++ M P+ V S++ +
Sbjct: 349 IVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLR 408
Query: 305 XXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLG 363
++ D++ +N L++ Y K E M+ G + TY T++ G
Sbjct: 409 FIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISG 468
Query: 364 HIQQAKELMKVM 375
KEL V+
Sbjct: 469 MTTHVKELHGVV 480
>AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3913168-3914385 REVERSE
Length = 405
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 2/270 (0%)
Query: 21 YRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGF 80
+R+L+ P V + AC M A D +E+ +Y I PD TYN +I
Sbjct: 134 FRNLEQYEIPRTVKSLNALLFACLM-AKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVL 192
Query: 81 CKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNS 140
C+ G + + + EM K I P ++ +IDG+ + +E ++ M + G+ +
Sbjct: 193 CESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGV 252
Query: 141 VIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSK 200
YN +I L LI ++ R+ P+ TYS+L G C N++EA
Sbjct: 253 ATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEV 312
Query: 201 ILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGN 260
++ N D+ + LI+ LC+ + A L + VP L++G
Sbjct: 313 MVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSK 372
Query: 261 VENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
V+ A ++ ++K N+ L+N V L
Sbjct: 373 VDEAKELI-AVVKEKFTRNVDLWNEVEAAL 401
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 1/199 (0%)
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
D ++N +I LC S + S + ++A M + + P +FG +IDG KE + +V
Sbjct: 181 DLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVM 240
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNS 327
M + G + YN +I LCK + + + +TY+ LI+G+C+
Sbjct: 241 RMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSE 300
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
+DEA M G + Y TLI+ LCK G + A L + + + +VP +
Sbjct: 301 ENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVM 360
Query: 388 TILITSFSKKCSPEEVIKL 406
L+ + + +E +L
Sbjct: 361 KWLVNGLASRSKVDEAKEL 379
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 11/275 (4%)
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEK----LKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
+PD + + + G+ M ++ +N + + +I V++ L+ A+ +
Sbjct: 105 QPDPKSESFAVRAIILYGRANMLDRSIQTFRN-LEQYEIPRTVKSLNALLFACLMAKDYK 163
Query: 123 EAFRLCDEMMKK-GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
EA R+ EM K G+ + YN +I L G +++ M I P ++ ++
Sbjct: 164 EANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLM 223
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
G + +E K + E + ++NI+I LC+ + AK L+ + +
Sbjct: 224 IDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRM 283
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE---EXXXX 298
P+ VT+ LI G C E N++ A+ ++E M+ +G KP+ Y ++I+ LCK E
Sbjct: 284 RPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALI 343
Query: 299 XXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEA 333
+ F V+ + L+NG + K+DEA
Sbjct: 344 LCRESMEKNWVPSFSVMKW--LVNGLASRSKVDEA 376
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 9/215 (4%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I LC+ + S+ + I P +F ++ID K D KV M +
Sbjct: 186 NRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKV---MRM 242
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M + + TYN +I CK K A+ L + +M + PN TY+ LI G+ +
Sbjct: 243 MDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEEN 302
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L+EA L + M+ G +S Y T+IH L GD E +L ++ P
Sbjct: 303 LDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKW 362
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI 215
L GL V+EA + + ++++ F+ N+
Sbjct: 363 LVNGLASRSKVDEAKELIA------VVKEKFTRNV 391
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 11/299 (3%)
Query: 138 MNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN---EA 194
++ +I++ + L E VS L+ + N+ PD + S + + G N +
Sbjct: 73 VDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQ--PDPKSESFAVRAIILYGRANMLDRS 130
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQL---LASMYVRGLVPDIVTFGSL 251
+ + + + S N L+ + + A ++ + MY G+ PD+ T+ +
Sbjct: 131 IQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMY--GIEPDLETYNRM 188
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL 311
I C+ G+ ++ + +M + KP + +I+G KEE +
Sbjct: 189 IRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGV 248
Query: 312 -FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
V TYN +I C K EA A + + + N TY+ LI+ C ++ +A
Sbjct: 249 HVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMN 308
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPL 429
L +VM+ G+ PD Y LI K E + L + K +P K +V+ L
Sbjct: 309 LFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGL 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 5/264 (1%)
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILEN--NLIEDAFSHNILINYLCRSNNLSGAKQ 231
D+ +S+ L R + + ++N + ++F+ +I Y R+N L + Q
Sbjct: 74 DRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILY-GRANMLDRSIQ 132
Query: 232 LLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS-GEKPNLVLYNSVINGL 290
++ + + + +L+ + + A +VY +M K G +P+L YN +I L
Sbjct: 133 TFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVL 192
Query: 291 CKEEXXXXXXXXXXXXXXMNLFDVI-TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
C+ + ++ +I+G+ K DE M G+
Sbjct: 193 CESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGV 252
Query: 350 ATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDY 409
ATYN +I LCK +AK L+ ++ P+ +TY++LI F + + +E + L +
Sbjct: 253 ATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEV 312
Query: 410 MVLKGVIPHKQTYKAVVSPLLQEG 433
MV G P + Y ++ L + G
Sbjct: 313 MVCNGYKPDSECYFTLIHCLCKGG 336
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N++I LCK K EA ++ + + PN VT++++I C +D A+ + EV
Sbjct: 256 NIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNL---FEV 312
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M +PDS Y LI CK G A L E MEK+ VP+ L++G +
Sbjct: 313 MVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSK 372
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTV 146
++EA L ++K+ N ++N V
Sbjct: 373 VDEAKELI-AVVKEKFTRNVDLWNEV 397
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 165/406 (40%), Gaps = 30/406 (7%)
Query: 8 CKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIR 67
C KLLE S +K + + N I +DLA+ +++M+
Sbjct: 38 CSTPKLLE--SALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQ-------E 88
Query: 68 PDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRL 127
P+ YN L GF + +L M+ + P+ TY++L+ S A E+ +
Sbjct: 89 PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQA 148
Query: 128 CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR 187
+ K G + I T+I + G + + M + D ++ + R
Sbjct: 149 --HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----DDIAWTTMVSAYRR 202
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
+++ A +++ E N + N LIN NL A+ L M V+ DI++
Sbjct: 203 VLDMDSANSLANQMSEKN----EATSNCLINGYMGLGNLEQAESLFNQMPVK----DIIS 254
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXX 307
+ ++I G+ + A+ V+ KMM+ G P+ V ++VI+ C
Sbjct: 255 WTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISA-CAHLGVLEIGKEVHMYT 313
Query: 308 XMNLF--DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
N F DV + L++ Y G ++ A F + N +N++I L G
Sbjct: 314 LQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPK----KNLFCWNSIIEGLAAHGFA 369
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV 411
Q+A ++ M ++ P+ +T+ + T+ + +E +++ M+
Sbjct: 370 QEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMI 415
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 49/276 (17%)
Query: 159 VSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILIN 218
+ L +S+M + P+ F Y+ L KG + + + + ++L +++ +++++ L+
Sbjct: 76 LDLAVSTMTQMQ-EPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVK 134
Query: 219 YLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKP 278
++ + L A ++ G + +LID + G + A +V+++M +
Sbjct: 135 ASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER---- 188
Query: 279 NLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSF 338
D I + T+++ Y +D A + +
Sbjct: 189 ----------------------------------DDIAWTTMVSAYRRVLDMDSANSLAN 214
Query: 339 AMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKC 398
M N AT N LIN LG+++QA+ L M V D I++T +I +S+
Sbjct: 215 QMSEK----NEATSNCLINGYMGLGNLEQAESLFNQMP----VKDIISWTTMIKGYSQNK 266
Query: 399 SPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
E I + M+ +G+IP + T V+S GV
Sbjct: 267 RYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGV 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
I PD +T + +I +G L + +++ ++ V +V + L+D YS+ SLE A
Sbjct: 283 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 342
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
+ + KK L +N++I L G + + + M + P+ T+ +
Sbjct: 343 LVFFNLPKKNL----FCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTAC 398
Query: 186 CRNGNVNEAFKFHSKILEN-NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD 244
G V+E + + ++++ +++ + + +++ ++ + A +L+ +M P+
Sbjct: 399 THAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE---PN 455
Query: 245 IVTFGSLIDGHCKEGNVENAVQVYEKMM 272
V +G+L+DG N+ A + K+M
Sbjct: 456 AVIWGALLDGCRIHKNLVIAEIAFNKLM 483
>AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4857361-4858959 FORWARD
Length = 532
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 5/194 (2%)
Query: 13 LLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSIT 72
L + + +F R K I P+ +N ++ K + A ++ ME I P+ +T
Sbjct: 278 LNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTME--EEKGIEPNVVT 335
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
YN LI CK K A+++ +EM+EK + P +RTY + R+ EE F L +M
Sbjct: 336 YNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM---RILRTGEEVFELLAKMR 392
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
K G Y +I L D + V LL M + + PD +Y ++ GL NG +
Sbjct: 393 KMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIE 452
Query: 193 EAFKFHSKILENNL 206
EA+ ++ ++ + +
Sbjct: 453 EAYGYYKEMKDKGM 466
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 173/406 (42%), Gaps = 25/406 (6%)
Query: 25 KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMG 84
+ G +V ++ +I + KM D A ++ +M S + +S T +I +C +
Sbjct: 114 QQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLV--NSQTLLIMIRKYCAVH 171
Query: 85 KLTMA-------EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRL--CDEMMKKG 135
+ A ++ K EM + + +L+ R +++ +A L C+ K
Sbjct: 172 DVGKAINTFHAYKRFKLEM-------GIDDFQSLLSALCRYKNVSDAGHLIFCN---KDK 221
Query: 136 LVMNSVIYNTVIH-WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
++ +N V++ W V G + M + + D +YS + + G++N+
Sbjct: 222 YPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKV 281
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV-RGLVPDIVTFGSLID 253
K ++ + + D +N +++ L +++ +S A+ L+ +M +G+ P++VT+ SLI
Sbjct: 282 LKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIK 341
Query: 254 GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD 313
CK E A QV+++M++ G P + Y++ + L E
Sbjct: 342 PLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPT-- 399
Query: 314 VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMK 373
V TY LI C D MK + + ++Y +I+ L G I++A K
Sbjct: 400 VETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYK 459
Query: 374 VMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
M +G P+ ++ + FS K E+ I V KG I K
Sbjct: 460 EMKDKGMRPNENVEDMIQSWFSGKQYAEQRITDSKGEVNKGAIVKK 505
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 154/343 (44%), Gaps = 22/343 (6%)
Query: 102 VPNVRTYATLIDGYSRARSLEEAFRLCDEMMK--KGLVMNSVIYNTVIHWLYVEGDMEGV 159
V +VR Y ++I + R + A+ L DEM K LV + + + + V + +
Sbjct: 118 VRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAI 177
Query: 160 SLLIS-SMVDNRIPPDKFTYSILTKGLCRNGNVNEA--FKFHSKILENNLIEDAFSHNIL 216
+ + + D F S+L+ LCR NV++A F +K + DA S NI+
Sbjct: 178 NTFHAYKRFKLEMGIDDFQ-SLLS-ALCRYKNVSDAGHLIFCNK---DKYPFDAKSFNIV 232
Query: 217 INYLCRSNNLSGAKQLLASMYVR----GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMM 272
+N C N+ G+ + +++ G+ D+V++ S+I + K G++ ++++++M
Sbjct: 233 LNGWC---NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMK 289
Query: 273 KSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD--VITYNTLINGYCNSGKI 330
K +P+ +YN+V++ L K + V+TYN+LI C + K
Sbjct: 290 KECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKT 349
Query: 331 DEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
+EA M G+ TY+ + L + G ++ EL+ M G P TY +L
Sbjct: 350 EEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVETYIML 406
Query: 391 ITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
I + + V+ L D M K V P +Y ++ L G
Sbjct: 407 IRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNG 449
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I LCK K EA VF L+ G++P + T++ + + + + ++++KM
Sbjct: 337 NSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRI---LRTGEEVFELLAKMRK 393
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M P TY LI C+ L +EM EK + P++ +Y +I G
Sbjct: 394 MGC---EPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGK 450
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
+EEA+ EM KG+ N + + + W
Sbjct: 451 IEEAYGYYKEMKDKGMRPNENVEDMIQSWF 480
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 162/374 (43%), Gaps = 24/374 (6%)
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
+PD N ++ G + K L EM ++ + P+ T+ ++ S+ F
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFA 133
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLC 186
++++ G V+N + N +I + GD+ G++ S + D+ K +S +T G
Sbjct: 134 FHGKVVRHGFVLNEYVKNALILFHANCGDL-GIA---SELFDDSAKAHKVAWSSMTSGYA 189
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
+ G ++EA ++ + +D + N++I + + A++L + R D+V
Sbjct: 190 KRGKIDEAM----RLFDEMPYKDQVAWNVMITGCLKCKEMDSAREL----FDRFTEKDVV 241
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNS------VINGLCKEEXXXXXX 300
T+ ++I G+ G + A+ ++++M +GE P++V S V+ L +
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
+N LI+ Y G ID A +K+ + +T+NTLI L
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL----STWNTLIVGLA 357
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV-LKGVIPHK 419
L H + + E+ + M P+ +T+ +I + S +E K M + + P+
Sbjct: 358 -LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNI 416
Query: 420 QTYKAVVSPLLQEG 433
+ Y +V L + G
Sbjct: 417 KHYGCMVDMLGRAG 430
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 19/254 (7%)
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+L+ A +L DE+ K + I N V+ E L + M + PD++T++
Sbjct: 61 ALKYAHKLFDEIPKPDVS----ICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFT 116
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ K + + F FH K++ + + + + N LI + +L A +L
Sbjct: 117 FVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDD---- 172
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL--CKEEXXX 297
V + S+ G+ K G ++ A++++++M + V +N +I G CKE
Sbjct: 173 SAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQ----VAWNVMITGCLKCKEMDSA 228
Query: 298 XXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
DV+T+N +I+GY N G EA M++AG + T +L++
Sbjct: 229 RELFDRFTEK-----DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 283
Query: 358 FLCKLGHIQQAKEL 371
LG ++ K L
Sbjct: 284 ACAVLGDLETGKRL 297
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 163/401 (40%), Gaps = 36/401 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKM----GAMDLALKVVS 56
N V+ + K + +S++ K G+ P+ TF ++ K+ KVV
Sbjct: 81 NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 140
Query: 57 KMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYS 116
V++ Y N LI G L +A +L ++ + V ++++ GY+
Sbjct: 141 HGFVLNEY-------VKNALILFHANCGDLGIASELFDDSAKAHKV----AWSSMTSGYA 189
Query: 117 RARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKF 176
+ ++EA RL DEM K + V +N +I +M+ L + D
Sbjct: 190 KRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRFTEK----DVV 241
Query: 177 TYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASM 236
T++ + G G EA ++ + D + L++ +L K+L +
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 237 YVRGLVPDIVTFGS-----LIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC 291
V + G+ LID + K G+++ A++V+ + + +L +N++I GL
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV----KDRDLSTWNTLIVGLA 357
Query: 292 KEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNA-GIAANHA 350
+ +T+ +I +SG++DE + M++ I N
Sbjct: 358 LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIK 417
Query: 351 TYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
Y +++ L + G +++A ++ M ++ P+ I + L+
Sbjct: 418 HYGCMVDMLGRAGQLEEAFMFVESMKIE---PNAIVWRTLL 455
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 209/470 (44%), Gaps = 61/470 (12%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
V++ ALC + + +A+ +F + NVV++N ++ + G M+ A +V M
Sbjct: 143 VMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMP-- 196
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
D +++N +I G+ + + A+ L +M EK++V T+ +++ GY R +
Sbjct: 197 -----SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV----TWTSMVYGYCRYGDV 247
Query: 122 EEAFRLCDEM----------MKKGLVMNSVIYNTVIHWLYVEGDMEGVS----LLISSM- 166
EA+RL EM M G N + ++ +L ++ D++ VS LIS
Sbjct: 248 REAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAY 307
Query: 167 ------VDNRIPPDKFTYSILTKG---LCRNGNVNEAF--KFHSKIL---ENNLIEDAF- 211
V+ R ++ +++ G + +G + ++ + S L +L+ ++F
Sbjct: 308 ACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFD 367
Query: 212 --SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
S NI+IN ++ +L A+ L V+ L D V++ S+IDG+ + G+V A +++
Sbjct: 368 LQSCNIIINRYLKNGDLERAETLFER--VKSL-HDKVSWTSMIDGYLEAGDVSRAFGLFQ 424
Query: 270 KMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDV-ITYNTLINGYCNSG 328
K+ + V + +I+GL + E L + TY+ L++ +
Sbjct: 425 KL----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATS 480
Query: 329 KIDEAFAFS--FAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYIT 386
+D+ A A + N+L++ K G I+ A E+ M+ + D ++
Sbjct: 481 NLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVS 536
Query: 387 YTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGVET 436
+ +I S ++ + L M+ G P+ T+ V+S G+ T
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLIT 586
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 117/258 (45%), Gaps = 24/258 (9%)
Query: 84 GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIY 143
G L A L +++ ++ + V + +L+ Y++ L+EA L + M ++ +V + +
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 144 NTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILE 203
+ + E +L +P + +++++ LC +G +A + ++ E
Sbjct: 116 TGYVKCRRMN---EAWTLF------REMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPE 166
Query: 204 NNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVEN 263
N++ S N L+ L R+ ++ AKQ+ +M R D+V++ ++I G+ + +E
Sbjct: 167 RNVV----SWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEE 218
Query: 264 AVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLING 323
A ++ M + N+V + S++ G C+ M +++++ +I+G
Sbjct: 219 AKLLFGDM----SEKNVVTWTSMVYGYCR---YGDVREAYRLFCEMPERNIVSWTAMISG 271
Query: 324 YCNSGKIDEAFAFSFAMK 341
+ + EA MK
Sbjct: 272 FAWNELYREALMLFLEMK 289
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 129/293 (44%), Gaps = 42/293 (14%)
Query: 13 LLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSIT 72
+LE ++ +++ G P++V +ID+ + G + A + +M +V I+
Sbjct: 346 ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNV-------IS 398
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
+N +I + + GK A +L E+ + +VP+ T A+++ Y+ + SL E + ++
Sbjct: 399 WNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIV 458
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVS-------------------------------L 161
K N++I N+++H + GD+E
Sbjct: 459 KSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVW 518
Query: 162 LISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH-NILINYL 220
L S M+ +R+ P+K T++ L +G V+E +++ + I+ H +++ +
Sbjct: 519 LFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLI 578
Query: 221 CRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
R+ N S AK+ L M VP +GSL++ ++ A E++ K
Sbjct: 579 GRTGNFSAAKRFLEEM---PFVPTARIWGSLLNASRNHKDITIAEFAAEQIFK 628
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 150/345 (43%), Gaps = 28/345 (8%)
Query: 79 GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK-KGLV 137
G K +L + ++ K + K + T A + G++ +R +E+A +L DEM K +
Sbjct: 43 GISKPARLVLRDRYK---VTKQVNDPALTRA--LRGFADSRLMEDALQLFDEMNKADAFL 97
Query: 138 MNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKF 197
N +I LY+E S MV + D FTY + K + ++ E K
Sbjct: 98 WNVMIKGFTSCGLYIEAVQ-----FYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKI 152
Query: 198 HSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK 257
H+ +++ + D + N LI+ + A+++ M R DIV++ S+I G+
Sbjct: 153 HAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER----DIVSWNSMISGYLA 208
Query: 258 EGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE---EXXXXXXXXXXXXXXMNLFDV 314
G+ +++ ++++M+K G KP+ S + G C + DV
Sbjct: 209 LGDGFSSLMLFKEMLKCGFKPDRFSTMSAL-GACSHVYSPKMGKEIHCHAVRSRIETGDV 267
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
+ ++++ Y G++ +++ + N I N +N +I + G + A +
Sbjct: 268 MVMTSILDMYSKYGEV----SYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQK 323
Query: 375 MILQ-GFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPH 418
M Q G PD IT L+ + + E +H Y + +G +PH
Sbjct: 324 MSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPH 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/441 (19%), Positives = 184/441 (41%), Gaps = 31/441 (7%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
VI ++ L E + +K G +V N +I + K+G A KV +M
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP--- 192
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
D +++N +I G+ +G + L EM++ P+ + + + S S +
Sbjct: 193 ----ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPK 248
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVE-GDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+ ++ + V+ T I +Y + G++ + + M+ I ++++
Sbjct: 249 MGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNI----VAWNVM 304
Query: 182 TKGLCRNGNVNEAFKFHSKILENN-LIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
RNG V +AF K+ E N L D + IN L S L G + + RG
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITS---INLLPASAILEG-RTIHGYAMRRG 360
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+P +V +LID + + G +++A ++++M + N++ +NS+I +
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRM----AEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 301 XXXXXXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
+L D T +++ Y S + E + + +N N+L++
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 476
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHK 419
G ++ A++ ++L+ D +++ +I +++ + L M+ V P+K
Sbjct: 477 AMCGDLEDARKCFNHILLK----DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNK 532
Query: 420 QTYKAV-----VSPLLQEGVE 435
T+ ++ +S ++ EG E
Sbjct: 533 STFASLLAACSISGMVDEGWE 553
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 140/356 (39%), Gaps = 52/356 (14%)
Query: 28 IWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLT 87
I N+V +N++I + G + A KM + ++PD IT L+ +
Sbjct: 294 IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQN--GLQPDVITSINLLPA----SAIL 347
Query: 88 MAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVI 147
+ M + +P++ LID Y L+ A + D M +K N + +N++I
Sbjct: 348 EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK----NVISWNSII 403
Query: 148 HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLI 207
G L + D+ + PD T + + + +++E + H+ I+++
Sbjct: 404 AAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW 463
Query: 208 EDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQV 267
+ N L++ +L A++ + L+ D+V++ S+I + G +V +
Sbjct: 464 SNTIILNSLVHMYAMCGDLEDARKCFNHI----LLKDVVSWNSIIMAYAVHGFGRISVWL 519
Query: 268 YEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNS 327
+ +M+ S PN T+ +L+ S
Sbjct: 520 FSEMIASRVNPNKS----------------------------------TFASLLAACSIS 545
Query: 328 GKIDEAFAFSFAMKNA-GIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVP 382
G +DE + + +MK GI Y +++ + + G+ AK ++ M FVP
Sbjct: 546 GMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM---PFVP 598
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 152/365 (41%), Gaps = 19/365 (5%)
Query: 50 LALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYA 109
L ++ V M ++ D+ TY +I + L +K+ +++ V +V
Sbjct: 110 LYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCN 169
Query: 110 TLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDN 169
+LI Y + +A ++ +EM ++ +V +N++I GD +L M+
Sbjct: 170 SLISLYMKLGCAWDAEKVFEEMPERDIVS----WNSMISGYLALGDGFSSLMLFKEMLKC 225
Query: 170 RIPPDKFTYSILTKGLCRNGNVNEAFK-FHSKILENNL-IEDAFSHNILINYLCRSNNLS 227
PD+F+ ++ G C + + K H + + + D +++ + +S
Sbjct: 226 GFKPDRFS-TMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVS 284
Query: 228 GAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMM-KSGEKPNLVLYNSV 286
A+++ M R +IV + +I + + G V +A ++KM ++G +P+++ +
Sbjct: 285 YAERIFNGMIQR----NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI---TS 337
Query: 287 INGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIA 346
IN L L ++ LI+ Y G++ A M
Sbjct: 338 INLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK--- 394
Query: 347 ANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKL 406
N ++N++I + G A EL + + VPD T ++ ++++ S E ++
Sbjct: 395 -NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREI 453
Query: 407 HDYMV 411
H Y+V
Sbjct: 454 HAYIV 458
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 160/384 (41%), Gaps = 61/384 (15%)
Query: 33 VTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKL 92
V++ +I + G +DLA K+ +M + D + YN ++ GF K G +T A +L
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQMPHVK------DVVIYNAMMDGFVKSGDMTSARRL 198
Query: 93 KNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVI-HWLY 151
+EM K ++ T+ T+I GY + ++ A +L D M ++ LV +NT+I +
Sbjct: 199 FDEMTHKTVI----TWTTMIHGYCNIKDIDAARKLFDAMPERNLVS----WNTMIGGYCQ 250
Query: 152 VEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAF 211
+ EG+ L + PD T + + G ++ H + L +
Sbjct: 251 NKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVK 310
Query: 212 SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
+++ + + AK++ M + + ++ ++I G+ GN A+ ++ M
Sbjct: 311 VCTAILDMYSKCGEIEKAKRIFDEMPEK----QVASWNAMIHGYALNGNARAALDLFVTM 366
Query: 272 MKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKID 331
M EKP D IT +I + G ++
Sbjct: 367 MIE-EKP----------------------------------DEITMLAVITACNHGGLVE 391
Query: 332 EAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
E + M+ G+ A Y +++ L + G +++A++L+ M F P+ I++
Sbjct: 392 EGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM---PFEPN----GIIL 444
Query: 392 TSFSKKCSPEEVIKLHDYMVLKGV 415
+SF C + I+ + ++ K V
Sbjct: 445 SSFLSACGQYKDIERAERILKKAV 468
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 132/308 (42%), Gaps = 31/308 (10%)
Query: 96 MMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH-WLYVEG 154
M+ I NV+ + + + A + A +L D+ ++ +S + N++I +L
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRD---DSFLSNSMIKAYLETRQ 57
Query: 155 DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHN 214
+ +L + PD FT++ LTK + V + + HS+I D +
Sbjct: 58 YPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVST 117
Query: 215 ILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
+++ + + A+ M R V ++ +LI G+ + G ++ A +++++M
Sbjct: 118 GVVDMYAKFGKMGCARNAFDEMPHRSEV----SWTALISGYIRCGELDLASKLFDQM--- 170
Query: 275 GEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD------VITYNTLINGYCNSG 328
++V+YN++++G K LFD VIT+ T+I+GYCN
Sbjct: 171 PHVKDVVIYNAMMDGFVKS---------GDMTSARRLFDEMTHKTVITWTTMIHGYCNIK 221
Query: 329 KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM-ILQGFVPDYITY 387
ID A AM N ++NT+I C+ Q+ L + M PD +T
Sbjct: 222 DIDAARKLFDAMPE----RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTI 277
Query: 388 TILITSFS 395
++ + S
Sbjct: 278 LSVLPAIS 285
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 111/241 (46%), Gaps = 12/241 (4%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
N+V++N +I C+ +++ +M+ + S+ PD +T ++ G L++ E
Sbjct: 237 NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATT--SLDPDDVTILSVLPAISDTGALSLGE 294
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
+ K + V+ ++D YS+ +E+A R+ DEM +K + +N +IH
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS----WNAMIHGY 350
Query: 151 YVEGDME-GVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
+ G+ + L ++ M++ + PD+ T + G V E K+ + E L
Sbjct: 351 ALNGNARAALDLFVTMMIEEK--PDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAK 408
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
+ +++ L R+ +L A+ L+ +M P+ + S + + ++E A ++ +
Sbjct: 409 IEHYGCMVDLLGRAGSLKEAEDLITNM---PFEPNGIILSSFLSACGQYKDIERAERILK 465
Query: 270 K 270
K
Sbjct: 466 K 466
>AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11938265-11939653 REVERSE
Length = 462
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 13/276 (4%)
Query: 9 KECKLLE-AMSVFYRSLKHGIWPNVVT---FNMIIDVACKMGAMDLALKVVSKMEVMSVY 64
K C +E A F ++ GI +VVT +++ V C G + A ++V +M + V
Sbjct: 185 KRCDQMELARDFFSLMVESGI--DVVTVYSLTVVVTVLCCNGEITRARELVEEMGL--VK 240
Query: 65 SIRPDSITYNCLIGGFCKMGKLTMAE-KLKNEMMEKD-IVPNVRTYATLIDGYSRARSLE 122
++ + +T+ +IG C + + E L ++MEK+ ++ ++ +Y LIDG++ +E
Sbjct: 241 GVKANIVTFKSMIG--CCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVE 298
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
EA RL M K L + S +YN +++ G +E V L S M + P+K TY +L
Sbjct: 299 EAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLM 358
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
GLC+ G V EA F +++ N D ++ L R + + +++A M G +
Sbjct: 359 NGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFI 418
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKP 278
P L D E N + A + ++K G KP
Sbjct: 419 PGATICERLADSLF-EVNRKEAQMLITIVVKCGIKP 453
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 126/295 (42%), Gaps = 9/295 (3%)
Query: 143 YNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKIL 202
+N++I G V + M +N + D+ T ++ L R + A F S ++
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 203 ENNL-IEDAFSHNILINYLCRSNNLSGAKQLLASM-YVRGLVPDIVTFGSLIDGHCKEGN 260
E+ + + +S +++ LC + ++ A++L+ M V+G+ +IVTF S+I K +
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261
Query: 261 VENAVQVYEKMMKSGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVIT 316
E V + M K +L Y +I+G EE + +
Sbjct: 262 FEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESY---L 318
Query: 317 YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
YN ++NGY G +++ M + G+ N TY L+N LCK G + +A + +
Sbjct: 319 YNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELR 378
Query: 377 LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
+ F D Y+ L + ++ +++ M+ G IP + + L +
Sbjct: 379 VNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFE 433
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 114/242 (47%), Gaps = 8/242 (3%)
Query: 50 LALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEM-MEKDIVPNVRTY 108
+L V S ++V++VYS+ ++ C G++T A +L EM + K + N+ T+
Sbjct: 197 FSLMVESGIDVVTVYSL-------TVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTF 249
Query: 109 ATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVD 168
++I + EE + M K+ ++++ Y +I G +E L+ M D
Sbjct: 250 KSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHD 309
Query: 169 NRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSG 228
++ + + Y+++ G R G V + + +S++ + + ++ +L+N LC++ +
Sbjct: 310 KKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCE 369
Query: 229 AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN 288
A L + V D + +L + + G ++ +++V +M++ G P + + +
Sbjct: 370 AMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLAD 429
Query: 289 GL 290
L
Sbjct: 430 SL 431
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 146/344 (42%), Gaps = 28/344 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I E KL EA + R G+ ++VT+N I + G AL V M
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRN 313
Query: 61 MSVYSIRPDSITY-----NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
+V R S+ C G K GK+ +++ DI NVR +LI Y
Sbjct: 314 CNV---RIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDI-DNVRN--SLITMY 367
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
SR L AF + ++ L +N++I E S L+ M+ + P+
Sbjct: 368 SRCSDLRHAFIVFQQVEANSLS----TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNH 423
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFS-HNILINYLCRSNNLSGAKQLLA 234
T + + R GN+ +FH IL +D N L++ +S + AK++
Sbjct: 424 ITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING----- 289
SM R D VT+ SLIDG+ + G E A+ ++ M +SG KP+ V +V++
Sbjct: 484 SMRKR----DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSN 539
Query: 290 LCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEA 333
L +E + L Y+ +++ YC +G +D+A
Sbjct: 540 LVREGHWLFTKMEHVFGIRLRLEH---YSCMVDLYCRAGYLDKA 580
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 175/421 (41%), Gaps = 31/421 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+I + + + E++SV+ R + GI + T+ +I + +D A V +
Sbjct: 153 NVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAAL--LDFAYGRVVHGSI 210
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
V S R + N LI + + GK+ +A +L + M E+D V ++ +I+ Y+
Sbjct: 211 -EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAV----SWNAIINCYTSEEK 265
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L EAF+L D M G+ + V +NT+ G+ G + M + +
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI------LINYLCRSNNLSGAKQLLA 234
K G + FH ++ + +FSH+I LI R ++L A +
Sbjct: 326 GLKACSHIGALKWGKVFHCLVIRSC----SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQ 381
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
+ L T+ S+I G E + ++M+ SG PN + S++ +
Sbjct: 382 QVEANSL----STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 295 XXXXXXXXXXXXXXMNLFD--VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
+ +I +N+L++ Y SG+I A +M+ + TY
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRK----RDKVTY 493
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVL 412
+LI+ +LG + A K M G PD++T ++++ CS +++ ++
Sbjct: 494 TSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA----CSHSNLVREGHWLFT 549
Query: 413 K 413
K
Sbjct: 550 K 550
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 146/344 (42%), Gaps = 28/344 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I E KL EA + R G+ ++VT+N I + G AL V M
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRN 313
Query: 61 MSVYSIRPDSITY-----NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGY 115
+V R S+ C G K GK+ +++ DI NVR +LI Y
Sbjct: 314 CNV---RIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDI-DNVRN--SLITMY 367
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
SR L AF + ++ L +N++I E S L+ M+ + P+
Sbjct: 368 SRCSDLRHAFIVFQQVEANSLS----TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNH 423
Query: 176 FTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFS-HNILINYLCRSNNLSGAKQLLA 234
T + + R GN+ +FH IL +D N L++ +S + AK++
Sbjct: 424 ITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING----- 289
SM R D VT+ SLIDG+ + G E A+ ++ M +SG KP+ V +V++
Sbjct: 484 SMRKR----DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSN 539
Query: 290 LCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEA 333
L +E + L Y+ +++ YC +G +D+A
Sbjct: 540 LVREGHWLFTKMEHVFGIRLRLEH---YSCMVDLYCRAGYLDKA 580
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 175/421 (41%), Gaps = 31/421 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+I + + + E++SV+ R + GI + T+ +I + +D A V +
Sbjct: 153 NVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAAL--LDFAYGRVVHGSI 210
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
V S R + N LI + + GK+ +A +L + M E+D V ++ +I+ Y+
Sbjct: 211 -EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAV----SWNAIINCYTSEEK 265
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
L EAF+L D M G+ + V +NT+ G+ G + M + +
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI------LINYLCRSNNLSGAKQLLA 234
K G + FH ++ + +FSH+I LI R ++L A +
Sbjct: 326 GLKACSHIGALKWGKVFHCLVIRSC----SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQ 381
Query: 235 SMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
+ L T+ S+I G E + ++M+ SG PN + S++ +
Sbjct: 382 QVEANSL----STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 295 XXXXXXXXXXXXXXMNLFD--VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
+ +I +N+L++ Y SG+I A +M+ + TY
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRK----RDKVTY 493
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVL 412
+LI+ +LG + A K M G PD++T ++++ CS +++ ++
Sbjct: 494 TSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA----CSHSNLVREGHWLFT 549
Query: 413 K 413
K
Sbjct: 550 K 550
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 187/435 (42%), Gaps = 54/435 (12%)
Query: 22 RSLKHGIW------------PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPD 69
+SLK G W PN + N +I + K G A KV +M + ++YS
Sbjct: 60 KSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYS---- 115
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
+N ++ G+ K G L A + + M E+D+V ++ T++ GY++ +L EA
Sbjct: 116 ---WNNMVSGYVKSGMLVRARVVFDSMPERDVV----SWNTMVIGYAQDGNLHEALWFYK 168
Query: 130 EMMKKGLVMNSVIYNTVI------HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
E + G+ N + ++ L + G +L++ + N + + SI+
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHG-QVLVAGFLSNVV----LSCSIID- 222
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
+ G + A + + ++D LI+ + ++ A++L M +
Sbjct: 223 AYAKCGQMESA----KRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEK---- 274
Query: 244 DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXX 303
+ V++ +LI G+ ++G+ A+ ++ KM+ G KP ++S LC
Sbjct: 275 NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSC---LCASASIASLRHGK 331
Query: 304 XXXXXMNLFDV----ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFL 359
M +V I ++LI+ Y SG ++ A + + +NT+I+ L
Sbjct: 332 EIHGYMIRTNVRPNAIVISSLIDMYSKSGSLE---ASERVFRICDDKHDCVFWNTMISAL 388
Query: 360 CKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLK-GVIPH 418
+ G +A ++ MI P+ T +++ + S EE ++ + M ++ G++P
Sbjct: 389 AQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPD 448
Query: 419 KQTYKAVVSPLLQEG 433
++ Y ++ L + G
Sbjct: 449 QEHYACLIDLLGRAG 463
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 150/355 (42%), Gaps = 19/355 (5%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
+VV++N ++ + G + AL + I+ + ++ L+ K +L +
Sbjct: 143 DVVSWNTMVIGYAQDGNLHEALWFYKEFRR---SGIKFNEFSFAGLLTACVKSRQLQLNR 199
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
+ +++ + NV ++ID Y++ +E A R DEM K + I+ T+I
Sbjct: 200 QAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI----HIWTTLISGY 255
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
GDME L M + + +++ L G R G+ N A K++ + +
Sbjct: 256 AKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQ 311
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
F+ + + +L K++ M + P+ + SLID + K G++E + +V+
Sbjct: 312 FTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR- 370
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGK 329
+K + V +N++I+ L + + + T ++N +SG
Sbjct: 371 --ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGL 428
Query: 330 IDEAFAFSFAMK-NAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPD 383
++E + +M GI + Y LI+ L + G KELM+ + F PD
Sbjct: 429 VEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCF---KELMRKIEEMPFEPD 480
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 118/248 (47%), Gaps = 18/248 (7%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
N V++ +I + G+ + AL + KM + V +P+ T++ + + L +
Sbjct: 275 NPVSWTALIAGYVRQGSGNRALDLFRKMIALGV---KPEQFTFSSCLCASASIASLRHGK 331
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEA---FRLCDEMMKKGLVMNSVIYNTVI 147
++ M+ ++ PN ++LID YS++ SLE + FR+CD+ + V +NT+I
Sbjct: 332 EIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK------HDCVFWNTMI 385
Query: 148 HWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFK-FHSKILENNL 206
L G ++ M+ R+ P++ T ++ +G V E + F S +++ +
Sbjct: 386 SALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGI 445
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCK-EGNVENAV 265
+ D + LI+ L R+ K+L+ + PD + +++ G C+ GN E
Sbjct: 446 VPDQEHYACLIDLLGRAGCF---KELMRKIEEMPFEPDKHIWNAIL-GVCRIHGNEELGK 501
Query: 266 QVYEKMMK 273
+ ++++K
Sbjct: 502 KAADELIK 509
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 188/449 (41%), Gaps = 71/449 (15%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+I K KL +AMS+F R + + V++N +I ++GA + L +++KM
Sbjct: 187 NVLIDMYSKCGKLDQAMSLFDRCDER----DQVSWNSLISGYVRVGAAEEPLNLLAKMHR 242
Query: 61 ----MSVYSIRPDSITYNCLIG---GFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLID 113
++ Y++ S+ C I GF + G K M E DIV VRT L+D
Sbjct: 243 DGLNLTTYAL--GSVLKACCINLNEGFIEKGMAIHCYTAKLGM-EFDIV--VRT--ALLD 295
Query: 114 GYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYV------EGDMEGVSLLISSMV 167
Y++ SL+EA +L M K N V YN +I E E L + M
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSK----NVVTYNAMISGFLQMDEITDEASSEAFKLFMD-MQ 350
Query: 168 DNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLS 227
+ P T+S++ K + + H+ I +NN D F + LI +
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTE 410
Query: 228 GAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI 287
Q AS + DI ++ S+ID H + +E+A ++ ++ S +P S++
Sbjct: 411 DGMQCFASTSKQ----DIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTV-SLM 465
Query: 288 NGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAA 347
C + F ++ I GY A+K +GI A
Sbjct: 466 MSACAD------------------FAALSSGEQIQGY--------------AIK-SGIDA 492
Query: 348 NHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLH 407
+ + I+ K G++ A ++ ++ PD TY+ +I+S ++ S E + +
Sbjct: 493 FTSVKTSSISMYAKSGNMPLANQV----FIEVQNPDVATYSAMISSLAQHGSANEALNIF 548
Query: 408 DYMVLKGVIPHKQTYKAVVSPLLQEGVET 436
+ M G+ P++Q + V+ G+ T
Sbjct: 549 ESMKTHGIKPNQQAFLGVLIACCHGGLVT 577
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 139/331 (41%), Gaps = 19/331 (5%)
Query: 80 FCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMN 139
+CK +L A +L + M E++I+ ++ +LI GY++ E+A L E + L ++
Sbjct: 92 YCKCRELGFARQLFDRMPERNII----SFNSLISGYTQMGFYEQAMELFLEAREANLKLD 147
Query: 140 SVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHS 199
Y + + D++ LL +V N + F ++L + G +++A
Sbjct: 148 KFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFD 207
Query: 200 KILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHC--- 256
+ E D S N LI+ R LLA M+ GL GS++ C
Sbjct: 208 RCDE----RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINL 263
Query: 257 KEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVIT 316
EG +E + ++ K G + ++V+ ++++ K N V+T
Sbjct: 264 NEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKN---VVT 320
Query: 317 YNTLINGYCNSGKI-----DEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
YN +I+G+ +I EAF M+ G+ + +T++ ++ ++ +++
Sbjct: 321 YNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Query: 372 MKVMILQGFVPDYITYTILITSFSKKCSPEE 402
++ F D + LI ++ S E+
Sbjct: 381 HALICKNNFQSDEFIGSALIELYALMGSTED 411
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 43/293 (14%)
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
D Y IL + ++G+V H +++++L + N L+N C+ L A+QL
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 234 ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS----------------GEK 277
M R +I++F SLI G+ + G E A++++ + ++ GE+
Sbjct: 106 DRMPER----NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 278 PNLVLYN-----SVINGLCKEEXXXXXXXXXXXX-----XXMNLF------DVITYNTLI 321
+L L V+NGL ++ M+LF D +++N+LI
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221
Query: 322 NGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC---KLGHIQQAKELMKVMILQ 378
+GY G +E M G+ +++ C G I++ +
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 379 GFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQ 431
G D + T L+ ++K S +E IKL M K V+ TY A++S LQ
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVV----TYNAMISGFLQ 330
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 171/387 (44%), Gaps = 13/387 (3%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
+VV FN +I+ ++G + ++ M IRP +T+ L+ + L +++
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSK 474
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
++ M + + ++ + LID YS L+++ + DEM K L VI+N++
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDL----VIWNSMFAGY 530
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
+ + E L + +R PD+FT++ + +V +FH ++L+ L +
Sbjct: 531 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 590
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
+ N L++ + + A + S R D+V + S+I + G + A+Q+ EK
Sbjct: 591 YITNALLDMYAKCGSPEDAHKAFDSAASR----DVVCWNSVISSYANHGEGKKALQMLEK 646
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGK 329
MM G +PN + + V++ + + Y +++ +G+
Sbjct: 647 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGR 706
Query: 330 IDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
+++A M A + +L++ K G+++ A+ ++ IL D ++T+
Sbjct: 707 LNKARELIEKMPTKPAA---IVWRSLLSGCAKAGNVELAEHAAEMAILSD-PKDSGSFTM 762
Query: 390 LITSFSKKCSPEEVIKLHDYMVLKGVI 416
L ++ K E K+ + M ++GV+
Sbjct: 763 LSNIYASKGMWTEAKKVRERMKVEGVV 789
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 88/490 (17%), Positives = 190/490 (38%), Gaps = 89/490 (18%)
Query: 24 LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
+K G +V ++ID K G +D A V + S ++T+ +I G KM
Sbjct: 175 VKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS-------TVTWTTMISGCVKM 227
Query: 84 GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIY 143
G+ ++ +L ++ME ++VP+ +T++ S LE ++ +++ GL M++ +
Sbjct: 228 GRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 144 NT-------------------------VIHWLYVEGDMEGVSL------LISSMVDNRIP 172
N +I W + + +L L +SM +
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 173 PDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQL 232
PD + S + + + H+ ++ NL D++ N LI+ + + L+ A+++
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 233 LASMYVRGLVPDIVTFGSLIDGHCKEGN---VENAVQVYEKMMKSGEKPNLVLYNSVIN- 288
D+V F ++I+G+ + G + A+ ++ M +P+L+ + S++
Sbjct: 408 FDIF----AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Query: 289 -------GLCKE------------------------EXXXXXXXXXXXXXXMNLFDVITY 317
GL K+ M + D++ +
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW 523
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
N++ GY + +EA ++ + + T+ ++ L +Q +E ++
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK 583
Query: 378 QGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI----------PHKQTYKAV-- 425
+G + L+ ++K SPE+ K D + V+ H + KA+
Sbjct: 584 RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQM 643
Query: 426 VSPLLQEGVE 435
+ ++ EG+E
Sbjct: 644 LEKMMSEGIE 653
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 180/428 (42%), Gaps = 64/428 (14%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRP----DS 70
EAM +F K G+ P++ + I+ + A+ +V Y+I+ DS
Sbjct: 333 EAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV-------HAYTIKANLGNDS 385
Query: 71 ITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSR---ARSLEEAFRL 127
N LI + K LT A K+ + D+V + +I+GYSR L EA +
Sbjct: 386 YVTNSLIDMYAKCDCLTDARKVFDIFAAADVV----LFNAMIEGYSRLGTQWELHEALNI 441
Query: 128 CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCR 187
+M + L+ S+ + VSLL +S S+ + GL +
Sbjct: 442 FRDMRFR-LIRPSL--------------LTFVSLLRASA------------SLTSLGLSK 474
Query: 188 NGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVT 247
+ H + + L D F+ + LI+ L ++ + M V+ D+V
Sbjct: 475 --------QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK----DLVI 522
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXX 307
+ S+ G+ ++ E A+ ++ ++ S E+P+ + +++
Sbjct: 523 WNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLL 582
Query: 308 XMNL-FDVITYNTLINGYCNSGKIDEAF-AFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
L + N L++ Y G ++A AF ++ + + +N++I+ G
Sbjct: 583 KRGLECNPYITNALLDMYAKCGSPEDAHKAF-----DSAASRDVVCWNSVISSYANHGEG 637
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
++A ++++ M+ +G P+YIT+ ++++ S E+ +K + M+ G+ P + Y +
Sbjct: 638 KKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCM 697
Query: 426 VSPLLQEG 433
VS L + G
Sbjct: 698 VSLLGRAG 705
>AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) |
chr5:9605650-9609625 FORWARD
Length = 1038
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 134/347 (38%), Gaps = 37/347 (10%)
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
S N +I F + G ++ AE + + ++ + T ATLI Y R L+EA RL
Sbjct: 635 SSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYL 694
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
+ SVI + + ++ G +E L + P T SIL L G
Sbjct: 695 AAGESKTPGKSVIRSMIDAYVRC-GWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRG 753
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG 249
EA LE N+ D +N LI + + L A ++ M+ G+ I T+
Sbjct: 754 KHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYN 813
Query: 250 SLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXM 309
++I + + ++ A++++ +SG LY
Sbjct: 814 TMISVYGRGLQLDKAIEIFSNARRSG------LY-------------------------- 841
Query: 310 NLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI-QQA 368
D Y +I Y GK+ EA + M+ GI +YN ++ +C + +
Sbjct: 842 --LDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEV 898
Query: 369 KELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGV 415
EL++ M G D TY LI +++ E K + KG+
Sbjct: 899 DELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 140/320 (43%), Gaps = 2/320 (0%)
Query: 65 SIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEA 124
S RP + Y ++ + ++GK+ MAE+ EM+E P+ T++ Y+R
Sbjct: 183 SYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAM 242
Query: 125 FRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKG 184
+ ++ +++++ +YN ++ L + V L MV+ +PP++FTY+++
Sbjct: 243 LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSS 302
Query: 185 LCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD 244
+ G EA K ++ + + +++ +I+ ++ + A L M +G+VP
Sbjct: 303 YAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPS 362
Query: 245 IVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXX 304
T +++ + K N A+ ++ M ++ + V+ +I K
Sbjct: 363 NYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFE 422
Query: 305 XXXXMNLF-DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLG 363
+NL D TY + + NSG + +A MK I + Y ++ K+
Sbjct: 423 ETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQ 482
Query: 364 HIQQAKELMKVMILQGFVPD 383
++ A+E + + G +PD
Sbjct: 483 NVDCAEEAFRALSKTG-LPD 501
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 156/367 (42%), Gaps = 8/367 (2%)
Query: 55 VSKMEVMS----VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYAT 110
VSK E+++ +R + T LI + + KL A++L E P +
Sbjct: 651 VSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESK-TPGKSVIRS 709
Query: 111 LIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNR 170
+ID Y R LE+A+ L E +KG +V + +++ L G + + ++
Sbjct: 710 MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKN 769
Query: 171 IPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAK 230
I D Y+ L K + G + A + + ++ + + ++N +I+ R L A
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 231 QLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
++ ++ GL D + ++I + K G + A+ ++ +M K G KP YN ++ +
Sbjct: 830 EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-I 888
Query: 291 CKEEXXXXXXXXXXXXXXMN--LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAAN 348
C N D+ TY TLI Y S + EA +K GI +
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLS 948
Query: 349 HATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHD 408
H+ +++L++ L K G +++A+ M G PD ++ + E+ I ++
Sbjct: 949 HSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYE 1008
Query: 409 YMVLKGV 415
M+ V
Sbjct: 1009 KMIRSSV 1015
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 14/285 (4%)
Query: 11 CKLLE-AMSVFYRSLKHGIWPNVVTFNMIIDVACKMG----AMDLALKVVSKMEVMSVYS 65
C LE A +F S + G P VT +++++ G A ++ + K +
Sbjct: 717 CGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEK-------N 769
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
I D++ YN LI + GKL A ++ M + +++TY T+I Y R L++A
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
+ + GL ++ IY +I G M L S M I P +Y+++ K +
Sbjct: 830 EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-I 888
Query: 186 CRNGNV-NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD 244
C + +E + + N D ++ LI S+ + A++ + + +G+
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLS 948
Query: 245 IVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING 289
F SL+ K G +E A + Y KM ++G P+ +++ G
Sbjct: 949 HSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKG 993
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 145/383 (37%), Gaps = 25/383 (6%)
Query: 12 KLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMG---AMDLALKVVSKMEVMSVYSIRP 68
K+ A F L+ G P+ V ++ + G AM K V + ++ S+
Sbjct: 203 KIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSV-- 260
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
YN ++ K L EM+E+ + PN TY ++ Y++ EEA +
Sbjct: 261 ----YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAF 316
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
EM G V V Y++VI GD E L M I P +T + + +
Sbjct: 317 GEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKT 376
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
N +A + + N + D ++I + A+ + L+ D T+
Sbjct: 377 ENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTY 436
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKP--------NLVLYNSVINGLCKEEXXXXXX 300
++ H GNV A+ V E MMK+ + P L Y + N C EE
Sbjct: 437 LAMSQVHLNSGNVVKALDVIE-MMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALS 495
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
L D + N ++N Y ++A F + + + Y T + C
Sbjct: 496 KT-------GLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYC 548
Query: 361 KLGHIQQAKELMKVMILQGFVPD 383
K G + +A++L+ M + V D
Sbjct: 549 KEGMVAEAQDLIVKMGREARVKD 571
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 4/242 (1%)
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQL-LASMYVRGLVPDI 245
R G+V++A I+ L + + LI R + L AK+L LA+ + P
Sbjct: 647 REGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESK--TPGK 704
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXX 305
S+ID + + G +E+A ++ + + G P V + ++N L
Sbjct: 705 SVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRT 764
Query: 306 XXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGH 364
N+ D + YNTLI +GK+ A M +G+ + TYNT+I+ +
Sbjct: 765 CLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQ 824
Query: 365 IQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKA 424
+ +A E+ G D YT +I + K E + L M KG+ P +Y
Sbjct: 825 LDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNM 884
Query: 425 VV 426
+V
Sbjct: 885 MV 886
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 61/121 (50%)
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
D + T++ Y G+ F A++ I + + YN +++ L K + +L
Sbjct: 222 DAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLW 281
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
M+ +G P+ TYT++++S++K+ EE +K M G +P + TY +V+S ++
Sbjct: 282 LEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKA 341
Query: 433 G 433
G
Sbjct: 342 G 342
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 105/251 (41%), Gaps = 38/251 (15%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I A+ + KL A ++ R G+ ++ T+N +I V + +D A+++ S
Sbjct: 778 NTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARR 837
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVP----------------- 103
+Y D Y +I + K GK++ A L +EM +K I P
Sbjct: 838 SGLYL---DEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRL 894
Query: 104 ------------------NVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNT 145
++ TY TLI Y+ + EA + + +KG+ ++ +++
Sbjct: 895 HHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSS 954
Query: 146 VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENN 205
++ L G ME M + I PD + KG G+ + F+ K++ ++
Sbjct: 955 LLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSS 1014
Query: 206 LIEDAFSHNIL 216
+ +D F +++
Sbjct: 1015 VEDDRFVSSVV 1025
>AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17292479-17293717 REVERSE
Length = 412
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 113/284 (39%), Gaps = 33/284 (11%)
Query: 108 YATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMV 167
Y+TLI Y +A A R ++M + G ++V +N +++ + + V L +
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI- 163
Query: 168 DNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLS 227
P ++ N +I D S+ ILI C S
Sbjct: 164 -----PQRY---------------------------NKIIPDKISYGILIKSYCDSGTPE 191
Query: 228 GAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI 287
A +++ M +G+ + F +++ K+G +E A ++ +M+K G + + YN I
Sbjct: 192 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI 251
Query: 288 NGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAA 347
KE D I+YN L+ YC G +DEA ++ A
Sbjct: 252 MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAP 311
Query: 348 NHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
N AT+ TLI LC +Q + K + +PD+ T L+
Sbjct: 312 NAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLV 355
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 4/240 (1%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYS-IRPDSITYN 74
AM F + ++G + V+FN +++ D ++ E+ Y+ I PD I+Y
Sbjct: 121 AMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFD--EIPQRYNKIIPDKISYG 178
Query: 75 CLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKK 134
LI +C G A ++ +M K + + T++ + LE A L +EM+KK
Sbjct: 179 ILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKK 238
Query: 135 GLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEA 194
G +++ YN I E E V LI M + PD +Y+ L C G ++EA
Sbjct: 239 GCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEA 297
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
K + + NN +A + LI +LC S + +PD T L+ G
Sbjct: 298 KKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVG 357
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 119/265 (44%), Gaps = 6/265 (2%)
Query: 175 KFTYSILTKGLCRNGNVNEAFKFHSKILENNL--IEDAFSHNILINYLCRSNNLSGAKQL 232
K + S L + + ++A K ++ + +++ + ++ + + L + S + L
Sbjct: 30 KISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETL 89
Query: 233 LASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING-LC 291
+ S + + + +LI + + +A++ +E+M + G + V +N+++N L
Sbjct: 90 IESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLH 149
Query: 292 KEEXXXXXXXXXXXXXXMN--LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANH 349
+ N + D I+Y LI YC+SG ++A M+ G+
Sbjct: 150 SKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTT 209
Query: 350 ATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDY 409
+ T+++ L K G ++ A L M+ +G D Y + I S ++K SPE V +L +
Sbjct: 210 IAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEE 268
Query: 410 MVLKGVIPHKQTYKAVVSPLLQEGV 434
M G+ P +Y +++ + G+
Sbjct: 269 MSSMGLKPDTISYNYLMTAYCERGM 293
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 7/237 (2%)
Query: 58 MEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEK--DIVPNVRTYATLIDGY 115
E M Y ++++N L+ +L +E+ ++ I+P+ +Y LI Y
Sbjct: 125 FEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSY 184
Query: 116 SRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDK 175
+ + E+A + +M KG+ + ++ + T++ LY +G++E L + MV D
Sbjct: 185 CDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDN 244
Query: 176 FTYSILTKGLCRNG--NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
Y++ + V E + S + L D S+N L+ C L AK++
Sbjct: 245 AAYNVRIMSAQKESPERVKELIEEMSSM---GLKPDTISYNYLMTAYCERGMLDEAKKVY 301
Query: 234 ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
+ P+ TF +LI C E +++K + + P+ ++ GL
Sbjct: 302 EGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGL 358
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
++ +L K+ +L A +++ +K G + +N+ I A K + +V +E M
Sbjct: 214 TILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK----ESPERVKELIEEM 269
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
S ++PD+I+YN L+ +C+ G L A+K+ + + PN T+ TLI +R
Sbjct: 270 SSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLY 329
Query: 122 EEAFRLCDEMMKKGLVMNSVI-YNTVIHWL--YVEGDMEGVSLLISSMVDNRIPP 173
E+ + + KK + M+ + +NT+ H + VE + + V + PP
Sbjct: 330 EQGYAI----FKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPP 380
>AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30395194-30396921 REVERSE
Length = 540
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 5/219 (2%)
Query: 73 YNCLIGGFCKMG-KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEM 131
+N ++ G+C + +T A+++ EM I PN +Y+ +I +S+ +L ++ RL DEM
Sbjct: 261 FNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEM 320
Query: 132 MKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNV 191
K+GL +YN++++ L E + L+ + + + PD TY+ + + LC G +
Sbjct: 321 KKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKL 380
Query: 192 NEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
+ A + ++ NL + + + + N ++L M + L P TF +
Sbjct: 381 DVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLI 436
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGL 290
+ K ENA++++ +M + N LY + I GL
Sbjct: 437 LGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGL 475
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 128/271 (47%), Gaps = 9/271 (3%)
Query: 6 ALCKECKLLEAMSVFYRSLKHGIWP-NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVY 64
ALC+ + +A S K ++P +V FN+I++ C + K + + M Y
Sbjct: 233 ALCRHGHIEKAEEFMLASKK--LFPVDVEGFNVILNGWCNIWTDVTEAKRIWRE--MGNY 288
Query: 65 SIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEA 124
I P+ +Y+ +I F K+G L + +L +EM ++ + P + Y +L+ +R +EA
Sbjct: 289 CITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEA 348
Query: 125 FRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKG 184
+L ++ ++GL +SV YN++I L G ++ ++++M+ + P T+ +
Sbjct: 349 MKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEA 408
Query: 185 LCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD 244
+ N + + ++ ++L + +++ L + A ++ A M +V +
Sbjct: 409 V----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVAN 464
Query: 245 IVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
+ + I G G +E A ++Y +M G
Sbjct: 465 PALYLATIQGLLSCGWLEKAREIYSEMKSKG 495
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 44/251 (17%)
Query: 184 GLCRNGNVNEA--FKFHSKILENNLIEDAFSHNILINYLCR-SNNLSGAKQLLASMYVRG 240
LCR+G++ +A F SK L D N+++N C +++ AK++ M
Sbjct: 233 ALCRHGHIEKAEEFMLASKKL---FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYC 289
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ P+ ++ +I K GN+ +++++Y++M K G P + +YNS++ L +E+
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTRED------ 343
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
C DEA + G+ + TYN++I LC
Sbjct: 344 ------------------------C----FDEAMKLMKKLNEEGLKPDSVTYNSMIRPLC 375
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
+ G + A+ ++ MI + P T+ +F + + E+ +++ M + + P ++
Sbjct: 376 EAGKLDVARNVLATMISENLSPTVDTF----HAFLEAVNFEKTLEVLGQMKISDLGPTEE 431
Query: 421 TYKAVVSPLLQ 431
T+ ++ L +
Sbjct: 432 TFLLILGKLFK 442
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 12/244 (4%)
Query: 143 YNTVIH-WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
+N +++ W + D+ + M + I P+K +YS + + GN+ ++ + + ++
Sbjct: 261 FNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEM 320
Query: 202 LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNV 261
+ L +N L+ L R + A +L+ + GL PD VT+ S+I C+ G +
Sbjct: 321 KKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKL 380
Query: 262 ENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDV-ITYNT- 319
+ A V M+ P + +++ + + E+ M + D+ T T
Sbjct: 381 DVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQ-------MKISDLGPTEETF 433
Query: 320 -LINGYCNSGKIDE-AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
LI G GK E A M I AN A Y I L G +++A+E+ M
Sbjct: 434 LLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKS 493
Query: 378 QGFV 381
+GFV
Sbjct: 494 KGFV 497
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 28/170 (16%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
N ++Y L +E EAM + + + G+ P+ VT+N +I C+ G +D+A V++ M
Sbjct: 333 NSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMIS 392
Query: 59 -----------------------EV---MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKL 92
EV M + + P T+ ++G K + A K+
Sbjct: 393 ENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKI 452
Query: 93 KNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVI 142
EM +IV N Y I G LE+A + EM KG V N ++
Sbjct: 453 WAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPML 502
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 175/400 (43%), Gaps = 30/400 (7%)
Query: 14 LEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITY 73
+++++ F RS V N + C+ G ++ A+K++ V + I P ++
Sbjct: 51 VDSITTFDRS--------VTDANTQLRRFCESGNLENAVKLLC---VSGKWDIDPRTL-- 97
Query: 74 NCLIGGFCKMGK-LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
C + C K L +++ N + V + + L Y+ L+EA R+ DE+
Sbjct: 98 -CSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK 156
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
+ ++ +N +++ L GD G L M+ + + D +T+S ++K +V+
Sbjct: 157 ----IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
+ H IL++ E N L+ + ++ + A+++ M R D++++ S+I
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSII 268
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF 312
+G+ G E + V+ +M+ SG + +L SV G C + F
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG-CADSRLISLGRAVHSIGVKACF 327
Query: 313 DVITY--NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
NTL++ Y G +D A A M + + +Y ++I + G +A +
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV----VSYTSMIAGYAREGLAGEAVK 383
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYM 410
L + M +G PD T T ++ ++ +E ++H+++
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 51/285 (17%)
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
G++ EA S++ + IE A NIL+N L +S + SG+ L M G+ D TF
Sbjct: 143 GDLKEA----SRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 249 GSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXX 308
+ +V Q++ ++KSG + NS++ K +
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE--- 255
Query: 309 MNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY---------------- 352
M DVI++N++INGY ++G ++ + M +GI + AT
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 353 -------------------NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITS 393
NTL++ K G + AK + + M + V +YT +I
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV----SYTSMIAG 371
Query: 394 FSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS-----PLLQEG 433
++++ E +KL + M +G+ P T AV++ LL EG
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 150/390 (38%), Gaps = 83/390 (21%)
Query: 36 NMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNE 95
N ++D+ K G +D A V +M SV ++Y +I G+ + G A KL E
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSV-------VSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 96 MMEKDIVPNVRTYATLIDGYSRARSLEEAFRL-------------------------CDE 130
M E+ I P+V T +++ +R R L+E R+ C
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGDM-------EGVSLLISSMVDNRIPPDKFTYSILTK 183
M + LV + + +I W + G E +SL + + R PD+ T + +
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP 243
++ + H I+ N D N L++ + L LLA M +
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL-----LLAHMLFDDIAS 562
Query: 244 -DIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXX 302
D+V++ +I G+ G + A+ ++ +M ++G +
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEA------------------------ 598
Query: 303 XXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKN-AGIAANHATYNTLINFLCK 361
D I++ +L+ +SG +DE + F M++ I Y +++ L +
Sbjct: 599 ----------DEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Query: 362 LGHIQQAKELMKVMILQGFVPDYITYTILI 391
G + +A ++ M + PD + L+
Sbjct: 649 TGDLIKAYRFIENMPIP---PDATIWGALL 675
>AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17160224-17162221 REVERSE
Length = 665
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 20/270 (7%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPN-------VVTFNMIIDVACKMGAMDLALK 53
N +I+ + K K A+ ++ L G PN V FN+++ A K G ++
Sbjct: 385 NHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVR 444
Query: 54 VVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLID 113
+++KME ++P +N ++ K + T A ++ M++ P V +Y L+
Sbjct: 445 LLNKMEDKG---LKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLS 501
Query: 114 GYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPP 173
+ + +EAFR+ + M+K G+ N Y T+ L + + L+ M I P
Sbjct: 502 ALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEP 561
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQL- 232
T++ + G RNG A+++ ++ N+ + ++ +LI L A +L
Sbjct: 562 SVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELH 621
Query: 233 ---------LASMYVRGLVPDIVTFGSLID 253
L+S +V T+G+ ID
Sbjct: 622 VKAQNEGLKLSSKPYDAVVKSAETYGATID 651
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 186/457 (40%), Gaps = 63/457 (13%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYN 74
EA + + GI PN+VT+N ++ + + G LK + +++ P+ ITY+
Sbjct: 202 EAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEF---LKALGILDLTKEKGFEPNPITYS 258
Query: 75 CLIGGFCKM----GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE--EAF--R 126
+ + +M G L +L+ + +++I +V GY E F R
Sbjct: 259 TALLVYRRMEDGMGALEFFVELREKYAKREIGNDV--------GYDWEFEFVKLENFIGR 310
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVS------------------LLISSMVD 168
+C ++M++ LV + V+ L D GV ++ +
Sbjct: 311 ICYQVMRRWLVKDDNWTTRVLKLLNAM-DSAGVRPSREEHERLIWACTREEHYIVGKELY 369
Query: 169 NRIPPDKFTYSILTKGLCRN-----GNVNE---AFKFHSKILE-----NNL-IEDAFSH- 213
RI + +S ++ +C + G + A + + +L+ NNL E SH
Sbjct: 370 KRI---RERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHF 426
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
NIL++ + +LL M +GL P + +++ K A+Q+++ M+
Sbjct: 427 NILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVD 486
Query: 274 SGEKPNLVLYNSVINGLCK----EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGK 329
+GEKP ++ Y ++++ L K +E NL+ T +++ G
Sbjct: 487 NGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNL 546
Query: 330 IDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTI 389
+D M + GI + T+N +I+ + G A E M + P+ ITY +
Sbjct: 547 LDTLLK---EMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEM 603
Query: 390 LITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
LI + + P +LH +G+ + Y AVV
Sbjct: 604 LIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 161/402 (40%), Gaps = 35/402 (8%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKM----GAMDLALKVVS 56
N ++ +E + L+A+ + + + G PN +T++ + V +M GA++ +++
Sbjct: 223 NTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELRE 282
Query: 57 KMEVMSV-----YSIRPDSITYNCLIGGFCKM----------GKLTMAEKLKNEMMEKDI 101
K + Y + + IG C T KL N M +
Sbjct: 283 KYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGV 342
Query: 102 VPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIH---WLYVEGDMEG 158
P+ + LI +R EE + + E+ K+ S I +V + WL +
Sbjct: 343 RPSREEHERLIWACTR----EEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWW 398
Query: 159 VSLLI-SSMVDNRIPPDKFTY-------SILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
+L I ++D P+ +Y +IL + G + +K+ + L
Sbjct: 399 AALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQR 458
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
N ++ +++ + A Q+ +M G P ++++G+L+ K + A +V+
Sbjct: 459 RHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNH 518
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGK 329
M+K G +PNL Y ++ + L ++ + V+T+N +I+G +G
Sbjct: 519 MIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGL 578
Query: 330 IDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL 371
A+ + MK+ + N TY LI L + A EL
Sbjct: 579 SGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYEL 620
>AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17870064-17871929 REVERSE
Length = 621
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 5/198 (2%)
Query: 68 PDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRL 127
PD+ITY+ L+ G CK +L A + ++M + P+++T+ LI G+ + L++A
Sbjct: 403 PDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALAC 462
Query: 128 CDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDN-RIPPDKFTYSILTKGLC 186
M++KG ++S + + +I + EG S+ + MV N + P + TY +L L
Sbjct: 463 FANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLL 522
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
+ EA + + N A + + YL + L AK+ L + + P
Sbjct: 523 KIKKSEEALDLLQMMKKQNYPAYAEAFD---GYLAKFGTLEDAKKFLDVLSSKD-SPSFA 578
Query: 247 TFGSLIDGHCKEGNVENA 264
+ +I+ +EG + +A
Sbjct: 579 AYFHVIEAFYREGRLTDA 596
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 138/357 (38%), Gaps = 76/357 (21%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
+ VT+N + V + ++ VV +M+ Y + D TY + F K +
Sbjct: 262 STVTYNAALRVLARPNSVAEFWSVVDEMKTAG-YDMDLD--TYIKVSRQFQKSRMMAETV 318
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARS--LEEAFRLCDEMMKKGLVMNSVIYNTVIH 148
KL MM+ P+++ + L+ S + + L+ FR+ + G ++ +Y+ +
Sbjct: 319 KLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHR 378
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIE 208
L G + + +M + PD TYS L GL
Sbjct: 379 SLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGL----------------------- 415
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
C++ L A+ +L M +G PDI T+ LI GHCK ++ A+ +
Sbjct: 416 ------------CKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACF 463
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG 328
M++ G NL DV LI+G+
Sbjct: 464 ANMLEKG-----------------------------FDIDSNLLDV-----LIDGFVIHN 489
Query: 329 KIDEAFAFSFAM-KNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
K + A F M KNA + +TY LI+ L K+ ++A +L+++M Q + P Y
Sbjct: 490 KFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNY-PAY 545
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 3/206 (1%)
Query: 212 SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
++N + L R N+++ ++ M G D+ T+ + K + V++YE M
Sbjct: 265 TYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYM 324
Query: 272 MKSGEKPNL---VLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG 328
M KP++ L ++G + Y+ + + G
Sbjct: 325 MDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVG 384
Query: 329 KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYT 388
+ DEA + AM+NAG ++ TY+ L+ LCK +++A+ ++ M QG PD T+T
Sbjct: 385 RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWT 444
Query: 389 ILITSFSKKCSPEEVIKLHDYMVLKG 414
ILI K ++ + M+ KG
Sbjct: 445 ILIQGHCKNNELDKALACFANMLEKG 470
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 20/213 (9%)
Query: 3 VIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+++ LCK +L EA V + G +P++ T+ ++I CK +D AL + M +
Sbjct: 411 LVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANM-LEK 469
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMME-KDIVPNVRTYATLIDGYSRARSL 121
+ I DS + LI GF K A EM++ ++ P TY LID + +
Sbjct: 470 GFDI--DSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKS 527
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIH-WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
EEA L +MMKK N Y +L G +E + ++ ++ P Y
Sbjct: 528 EEALDLL-QMMKK---QNYPAYAEAFDGYLAKFGTLEDAKKFL-DVLSSKDSPSFAAYFH 582
Query: 181 LTKGLCRNGNVNEA----------FKFHSKILE 203
+ + R G + +A FK H KI E
Sbjct: 583 VIEAFYREGRLTDAKNLLFICPHHFKTHPKISE 615
>AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4445461-4447290 FORWARD
Length = 609
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 154/367 (41%), Gaps = 8/367 (2%)
Query: 27 GIWPNVVTFNMIIDVACKMGAMDLALKVVS--KMEVMSVYSIRPDSITYNCLIGGFCKMG 84
G+ P+ + I++ K+G +++ K + +S + SI Y + K G
Sbjct: 204 GVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSI-YTIVCSSLAKSG 262
Query: 85 KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYN 144
+ A ++ EM +K I + Y+ LI ++ AR + +L E K L+ + +
Sbjct: 263 RAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCL 322
Query: 145 TVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
V+ EG+ME ++++M + + G + EA K + ++
Sbjct: 323 KVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKE 382
Query: 205 NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA 264
++ I IN CR + A+ L M +G +V + +++D + K + +A
Sbjct: 383 ECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDA 442
Query: 265 VQVYEKMMKSGEKPNLVLYNSVINGLCKE-EXXXXXXXXXXXXXXMNLFDVITYNTLING 323
V++ KM + G KPN+ +YNS+I+ + + L D ++Y ++I+
Sbjct: 443 VRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISA 502
Query: 324 YCNSGKIDEAFAF--SFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFV 381
Y S +++ F M I + A ++ K I + L++ M ++G
Sbjct: 503 YNRSKELERCVELYQEFRMNRGKI--DRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTR 560
Query: 382 PDYITYT 388
D Y+
Sbjct: 561 LDARLYS 567
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 121/279 (43%), Gaps = 6/279 (2%)
Query: 142 IYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
IY V L G ++ M D IP YS+L + V K +
Sbjct: 250 IYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEA 309
Query: 202 LENNLIEDA-FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGN 260
L++D +++ Y+ R N+ +++A+M L ++++G K+
Sbjct: 310 GGKKLLKDPEMCLKVVLMYV-REGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG 368
Query: 261 VENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD--VITYN 318
AV+VYE MK + V Y IN C+ E FD V+ Y+
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG-FDKCVVAYS 427
Query: 319 TLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
+++ Y + ++ +A MK G N YN+LI+ + +++A+++ K M
Sbjct: 428 NIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRA 487
Query: 379 GFVPDYITYTILITSFSKKCSPEEVIKLH-DYMVLKGVI 416
+PD ++YT +I+++++ E ++L+ ++ + +G I
Sbjct: 488 KVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKI 526
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%)
Query: 71 ITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDE 130
+TY I +C++ K AE L +EM++K V Y+ ++D Y + R L +A RL +
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 131 MMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGN 190
M ++G N IYN++I D+ + M ++ PDK +Y+ + R+
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 191 VNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGS 250
+ + + + N D I++ +++ + +LL M V G D + S
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSS 568
Query: 251 LIDG 254
++
Sbjct: 569 ALNA 572
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 100/251 (39%), Gaps = 1/251 (0%)
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
Y+I+ L ++G EA + ++ + + E + +++LI + + ++L
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 310
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
+ L+ D ++ + +EGN+E ++V M K+ K + +++NG K+
Sbjct: 311 GKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFA 370
Query: 298 XXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLI 356
+TY IN YC K ++A M G Y+ ++
Sbjct: 371 EAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIM 430
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
+ K + A LM M +G P+ Y LI + K+ M V+
Sbjct: 431 DMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVL 490
Query: 417 PHKQTYKAVVS 427
P K +Y +++S
Sbjct: 491 PDKVSYTSMIS 501
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+ I A C+ K +A +F +K G VV ++ I+D+ K + A+++++KM+
Sbjct: 393 IAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQR 452
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
+P+ YN LI + L AEK+ EM ++P+ +Y ++I Y+R++ L
Sbjct: 453 GC---KPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKEL 509
Query: 122 EEAFRLCDEM-MKKGLV 137
E L E M +G +
Sbjct: 510 ERCVELYQEFRMNRGKI 526
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 150/349 (42%), Gaps = 54/349 (15%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
++VT+N +I + A+ V +M ++ V +PD T+ L+ + L M +
Sbjct: 353 DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV---KPDEFTFGSLLATSLDLDVLEMVQ 409
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
+++ + + LI YS+ +E+A D + ++ L N + +N +I
Sbjct: 410 AC---IIKFGLSSKIEISNALISAYSKNGQIEKA----DLLFERSLRKNLISWNAIISGF 462
Query: 151 YVEG----DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
Y G +E S L+ S V RI PD +T S L ++ + H+ +L +
Sbjct: 463 YHNGFPFEGLERFSCLLESEV--RILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQ 520
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
++ N LIN + + + ++ M + D+V++ SLI + + G ENAV
Sbjct: 521 FKETLIGNALINMYSQCGTIQNSLEVFNQMSEK----DVVSWNSLISAYSRHGEGENAVN 576
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCN 326
Y+ M G+ VI D T++ +++ +
Sbjct: 577 TYKTMQDEGK---------VIP------------------------DAATFSAVLSACSH 603
Query: 327 SGKIDEAFA-FSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
+G ++E F+ ++ G+ N ++ L++ L + GH+ +A+ L+K+
Sbjct: 604 AGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKI 652
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 179/427 (41%), Gaps = 89/427 (20%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMD-----LALKV- 54
NVVI L K E++ VF + L+ + P +TF ++ +C AM LA+K
Sbjct: 261 NVVIDGLAG-FKRDESLLVFRKMLEASLRPTDLTFVSVMG-SCSCAAMGHQVHGLAIKTG 318
Query: 55 -----VSKMEVMSVYSI---------------RPDSITYNCLIGGF--CKMGKLTMAEKL 92
+ M++YS D +T+N +I + K+GK M+ +
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMS--V 376
Query: 93 KNEMMEKDIVPNVRTYATLIDGYSRARSLE----EAFRLCDEMMKKGLVMNSVIYNTVIH 148
M + P+ T+ +L+ A SL+ E + C ++K GL I N +I
Sbjct: 377 YKRMHIIGVKPDEFTFGSLL-----ATSLDLDVLEMVQAC--IIKFGLSSKIEISNALIS 429
Query: 149 WLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN--NL 206
G +E LL + + + +++ + G NG E + S +LE+ +
Sbjct: 430 AYSKNGQIEKADLLF----ERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRI 485
Query: 207 IEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQ 266
+ DA++ + L++ +++L Q A + G + + +LI+ + + G ++N+++
Sbjct: 486 LPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLE 545
Query: 267 VYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCN 326
V+ +M EK DV+++N+LI+ Y
Sbjct: 546 VFNQM---SEK-----------------------------------DVVSWNSLISAYSR 567
Query: 327 SGKIDEAFAFSFAMKNAG-IAANHATYNTLINFLCKLGHIQQAKELMKVMI-LQGFVPDY 384
G+ + A M++ G + + AT++ +++ G +++ E+ M+ G + +
Sbjct: 568 HGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNV 627
Query: 385 ITYTILI 391
++ L+
Sbjct: 628 DHFSCLV 634
>AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4962293-4965976 FORWARD
Length = 1227
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 155/392 (39%), Gaps = 46/392 (11%)
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
YN LI G C K + A + +EM++K +P++ + LI RA AF L ++
Sbjct: 742 YNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQ-- 799
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
+ +S ++ +I L + G M + M+ N + Y+++ +G C+ N
Sbjct: 800 ----IDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWM 855
Query: 193 EAFKFHSKILENNLIEDAFSH------------------------------------NIL 216
+ + ++ N+I S+ N+L
Sbjct: 856 KVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNML 915
Query: 217 INYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE 276
I Y+ R+ N ++L M RG++PD TF L+ G+ + ++++ M+ G
Sbjct: 916 IFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGM 975
Query: 277 KPNLVLYNSVINGLCK--EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAF 334
KPN +V + LC + NL + ++ + G+I +A
Sbjct: 976 KPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAE 1035
Query: 335 AFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
F + G+ A Y+ +I L G++ A L+ M+ +P +Y +I
Sbjct: 1036 DFLTRVTRNGMMA--PNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGL 1093
Query: 395 SKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
+ ++ + H MV G+ P T+ +V
Sbjct: 1094 LRYNQLDKAMDFHTEMVELGLSPSISTWSGLV 1125
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 143/329 (43%), Gaps = 42/329 (12%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKH-GIWPNVVTFNMIIDVACKMGAMDLALKVVSKME 59
N ++++LC+ E V+ L+H G + VTF ++I C G + A+ +S E
Sbjct: 327 NRILHSLCRRFGS-ERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLS--E 383
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+MS +PD +YN ++ G + G + +EM E ++ ++ T+ ++ GY +AR
Sbjct: 384 IMS-KGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKAR 442
Query: 120 SLEEAFRLCDEMMKKGLVMNSVI---------------------------------YNTV 146
EEA R+ ++M GL+ S + ++ +
Sbjct: 443 QFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDL 502
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
+ LY+ D++ ++ ++D + P+ ++ L +G++ A + ++
Sbjct: 503 GNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMARWGQ 559
Query: 207 IEDAFSHNILINYLCRSN-NLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
S +L+ LC S +L + LL D T L+ +CK+G ++
Sbjct: 560 KLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSK 619
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCKEE 294
++ KM++ + V Y S+I CK+E
Sbjct: 620 LIFHKMVQMHHPIDNVTYTSLIRCFCKKE 648
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 7/262 (2%)
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
LIG + A L + M K +VP Y LID R E A+R+C + ++
Sbjct: 189 LIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETR 248
Query: 136 LVMNSVIYNT---VIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
+N + ++ VI L ++ ++ +L +V + YS +T G +
Sbjct: 249 AELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFE 308
Query: 193 EAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLI 252
+ F I E D F N +++ LCR A + + G D VTFG LI
Sbjct: 309 DLLSF---IGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILI 365
Query: 253 DGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN-L 311
C EG+++ AV ++M G KP++ YN++++GL ++ +
Sbjct: 366 GWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMM 425
Query: 312 FDVITYNTLINGYCNSGKIDEA 333
+ T+ ++ GYC + + +EA
Sbjct: 426 LSLSTFKIMVTGYCKARQFEEA 447
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 106/230 (46%), Gaps = 5/230 (2%)
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M + PD T+N L+ G+ + + + + M+ K + PN R+ +
Sbjct: 935 MQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGD 994
Query: 121 LEEAFRLCDEMMKKGLVM-NSVIYNTVIHWLYVEGDMEGVSLLISSMVDN-RIPPDKFTY 178
+++A L M KG + +SV+ ++ L +G++ ++ + N + P+ Y
Sbjct: 995 VKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN---Y 1051
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
+ K L GN++ A + +L+N I + S++ +IN L R N L A M
Sbjct: 1052 DNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVE 1111
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVIN 288
GL P I T+ L+ C+ V + ++ + M+ GE P+ ++ +VI+
Sbjct: 1112 LGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVID 1161
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 147/334 (44%), Gaps = 23/334 (6%)
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE---------E 123
YN + G+CK E++ M+ K+I+ +V++Y Y R LE +
Sbjct: 841 YNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYRE----YVRKMCLEPQSLSAISLK 896
Query: 124 AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
F L E G++ IYN +I +++ + V+ ++ M + PD+ T++ L
Sbjct: 897 EFLLLGESNPGGVI----IYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVH 952
Query: 184 GLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL-V 242
G + + + + ++ S ++ + + S + + LC + ++ A L M +G +
Sbjct: 953 GYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNL 1012
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGE-KPNLVLYNSVINGLC-KEEXXXXXX 300
V +++ +G + A ++ ++G PN Y+++I L +
Sbjct: 1013 GSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVH 1069
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
++ +Y+++ING ++D+A F M G++ + +T++ L++ C
Sbjct: 1070 LLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFC 1129
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSF 394
+ + +++ L+K M+ G P + +I F
Sbjct: 1130 EACQVLESERLIKSMVGLGESPSQEMFKTVIDRF 1163
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 160/418 (38%), Gaps = 27/418 (6%)
Query: 29 WPNVV------TFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRP-DSITYNCLIGGFC 81
WP + T N ++ CK G + + KM M P D++TY LI FC
Sbjct: 590 WPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMH----HPIDNVTYTSLIRCFC 645
Query: 82 KMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSV 141
K L + + +P++ L + R +EE +L + + + S
Sbjct: 646 KKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSE 705
Query: 142 IYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
+ L V G ++ + ++ Y+ L KGLC + AF ++
Sbjct: 706 ACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEM 765
Query: 202 LENNLIEDAFSHNILINYLCRSNNLSGAKQL---LASMYVR-GLVPDIVTFGSLIDGHCK 257
L+ I S +LI LCR+N A L + S YV L+ + G ++D
Sbjct: 766 LDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDA--- 822
Query: 258 EGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVIT 316
EN +++ M+ +G +YN + G CK N+ V +
Sbjct: 823 ----ENQLRI---MLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKS 875
Query: 317 YNTLINGYCNSGKIDEAFAF-SFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM 375
Y + C + A + F + YN LI ++ + + + +++ M
Sbjct: 876 YREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEM 935
Query: 376 ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
+G +PD T+ L+ +S ++ M+ KG+ P+ ++ +AV S L G
Sbjct: 936 QGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNG 993
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 123/330 (37%), Gaps = 38/330 (11%)
Query: 103 PNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLL 162
P+V ++ R E A+ +E+ G + V + +I W EGD++ L
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 163 ISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCR 222
+S ++ PD ++Y+ + GL R G ++ EN ++ + I++ C+
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 223 SNNLSGAKQLLASMYVRGLVP------------DIVTFGSLI-----DGHCKEGNVE--- 262
+ AK+++ M+ GL+ +V F L D E
Sbjct: 441 ARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFD 500
Query: 263 ---NAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVI---- 315
N + ++ + ++ N+VL SV+ + L D +
Sbjct: 501 DLGNGLYLHTDLDAYEQRVNMVLDRSVLPEF--NSLIVRASEDGDLQTALRLLDEMARWG 558
Query: 316 ------TYNTLINGYCNSGKIDEAFAFSFAMKNAGIA--ANHATYNTLINFLCKLGHIQQ 367
++ L+ C S + + S K +A + T N L+ CK G +
Sbjct: 559 QKLSRRSFAVLMRSLCAS-RAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRH 617
Query: 368 AKELMKVMILQGFVPDYITYTILITSFSKK 397
+K + M+ D +TYT LI F KK
Sbjct: 618 SKLIFHKMVQMHHPIDNVTYTSLIRCFCKK 647
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 148/374 (39%), Gaps = 47/374 (12%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
V +Y+ C E L M + + H +VVT+N I + G M+L V + M
Sbjct: 171 VSMYSRCGEWVLAARM---FEKVPH---KSVVTYNAFISGLMENGVMNLVPSVFNLMRKF 224
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
S S P+ +T+ I + L +L +M+K+ LID YS+ R
Sbjct: 225 S--SEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCW 282
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+ A+ + E+ N + +N+VI + + G E L + + PD T++ L
Sbjct: 283 KSAYIVFTELKD---TRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSL 339
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
G + G V EAFKF ++L ++ L++ L K++ +
Sbjct: 340 ISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAA 399
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
DI SLID + K G A +++++ KP
Sbjct: 400 ERDIFVLTSLIDMYMKCGLSSWARRIFDRFEP---KPK---------------------- 434
Query: 302 XXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
D + +N +I+GY G+ + A ++ + + AT+ +++
Sbjct: 435 -----------DPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSH 483
Query: 362 LGHIQQAKELMKVM 375
G++++ ++ ++M
Sbjct: 484 CGNVEKGSQIFRLM 497
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 117/263 (44%), Gaps = 8/263 (3%)
Query: 10 ECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPD 69
+C+ ++ + + LK N++++N +I G + A+++ K++ ++PD
Sbjct: 278 KCRCWKSAYIVFTELKDT--RNLISWNSVISGMMINGQHETAVELFEKLDS---EGLKPD 332
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
S T+N LI GF ++GK+ A K M+ +VP+++ +L+ S +L+ +
Sbjct: 333 SATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHG 392
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
++K + + ++I +Y++ + + I + + P D ++++ G ++G
Sbjct: 393 HVIKAAAERDIFVLTSLID-MYMKCGLSSWARRIFDRFEPK-PKDPVFWNVMISGYGKHG 450
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR-GLVPDIVTF 248
A + + E + + +++ N+ Q+ M G P
Sbjct: 451 ECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHI 510
Query: 249 GSLIDGHCKEGNVENAVQVYEKM 271
G +ID + G + A +V ++M
Sbjct: 511 GCMIDLLGRSGRLREAKEVIDQM 533
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/367 (19%), Positives = 143/367 (38%), Gaps = 16/367 (4%)
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
+ S P+ T+ L+ K+G + L ++++ +V T L+ Y + + +
Sbjct: 24 ILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVT 83
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
+A ++ DEM ++G+ N + L G + D R+ +
Sbjct: 84 DALKVLDEMPERGIAS----VNAAVSGLLENGFCRDAFRMFG---DARVSGSGMNSVTVA 136
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
L G++ + H +++ + + L++ R G L A M+ +
Sbjct: 137 SVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRC----GEWVLAARMFEKVPH 192
Query: 243 PDIVTFGSLIDGHCKEGNVENAVQVYEKMMK-SGEKPNLVLYNSVINGLCKEEXXXXXXX 301
+VT+ + I G + G + V+ M K S E+PN V + + I
Sbjct: 193 KSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQ 252
Query: 302 XXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
F+ + LI+ Y A+ +K+ N ++N++I+ +
Sbjct: 253 LHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDT---RNLISWNSVISGMM 309
Query: 361 KLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQ 420
G + A EL + + +G PD T+ LI+ FS+ E K + M+ ++P +
Sbjct: 310 INGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLK 369
Query: 421 TYKAVVS 427
+++S
Sbjct: 370 CLTSLLS 376
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 98/465 (21%), Positives = 184/465 (39%), Gaps = 81/465 (17%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
PN TF ++ K+G + + +++ V + + + D T L+ + K+ ++T A
Sbjct: 29 PNKFTFPPLLKSCAKLGDV-VQGRILHAQVVKTGFFV--DVFTATALVSMYMKVKQVTDA 85
Query: 90 EKLKNEMMEKDIVP-NVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVI- 147
K+ +EM E+ I N L +G+ R +AFR+ + G MNSV +V+
Sbjct: 86 LKVLDEMPERGIASVNAAVSGLLENGFCR-----DAFRMFGDARVSGSGMNSVTVASVLG 140
Query: 148 -----------HWLYVEGDME-----GVSLL----------ISSMVDNRIPPDKF-TYSI 180
H L ++ E G SL+ +++ + ++P TY+
Sbjct: 141 GCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNA 200
Query: 181 LTKGLCRNGNVN---EAFKFHSKILENNLIEDAFSHNILINYLCRSN-NLSGAKQLLASM 236
GL NG +N F K + F + I C S NL +QL +
Sbjct: 201 FISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITA---CASLLNLQYGRQLHGLV 257
Query: 237 YVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXX 296
+ + + +LID + K ++A V+ ++ + NL+ +NSVI+G+
Sbjct: 258 MKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELK---DTRNLISWNSVISGMMINGQH 314
Query: 297 XXXXXXXXXXXXMNL-FDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTL 355
L D T+N+LI+G+ GK+ EAF F M + + + +L
Sbjct: 315 ETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSL 374
Query: 356 INFLCKL----------GHIQQAKELMKVMILQGFV-----------------------P 382
++ + GH+ +A + +L +
Sbjct: 375 LSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPK 434
Query: 383 DYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
D + + ++I+ + K E I++ + + + V P T+ AV+S
Sbjct: 435 DPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLS 479
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 136/322 (42%), Gaps = 39/322 (12%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM-- 58
N++I + +A + + LK IWP+ +TF +I + +M + + + S++
Sbjct: 86 NLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVR 145
Query: 59 ---------------------------EVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEK 91
+ R D +++ ++ G+CK G + A +
Sbjct: 146 FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR-DVVSWTSMVAGYCKCGMVENARE 204
Query: 92 LKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLY 151
+ +EM + N+ T++ +I+GY++ E+A L + M ++G+V N + +VI
Sbjct: 205 MFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCA 260
Query: 152 VEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAF 211
G +E +V + + + + L R G++ +A + E D+
Sbjct: 261 HLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET----DSL 316
Query: 212 SHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKM 271
S + +I L + A + M G +P VTF +++ G VE +++YE M
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Query: 272 MKS-GEKPNLVLYNSVINGLCK 292
K G +P L Y +++ L +
Sbjct: 377 KKDHGIEPRLEHYGCIVDMLGR 398
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 120/297 (40%), Gaps = 52/297 (17%)
Query: 139 NSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFH 198
N ++N +I + + M+ +RI PD T+ L K V + H
Sbjct: 81 NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTH 140
Query: 199 SKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
S+I+ D + N L++ ++ A ++ M R D+V++ S++ G+CK
Sbjct: 141 SQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR----DVVSWTSMVAGYCKC 196
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYN 318
G VENA +++++M P+ NLF T++
Sbjct: 197 GMVENAREMFDEM------PH-----------------------------RNLF---TWS 218
Query: 319 TLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
+INGY + ++A MK G+ AN ++I+ LG ++ + + ++
Sbjct: 219 IMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKS 278
Query: 379 GFVPDYITYTILITSFSKKCSPEEVIKLHDYM----------VLKGVIPHKQTYKAV 425
+ I T L+ F + E+ I + + + ++KG+ H +KA+
Sbjct: 279 HMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAM 335
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 161/372 (43%), Gaps = 32/372 (8%)
Query: 14 LEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITY 73
LE++S F GIW + T+ ++ + DL E++ R I
Sbjct: 84 LESLSFFSSMKSRGIWADEYTYAPLLKSCSSLS--DLRFGKCVHGELIRTGFHRLGKIRI 141
Query: 74 NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK 133
++ + G++ A+K+ +EM E+++V + +I G+ + +E L +M +
Sbjct: 142 G-VVELYTSGGRMGDAQKVFDEMSERNVV----VWNLMIRGFCDSGDVERGLHLFKQMSE 196
Query: 134 KGLVMNSVIYNTVIHWLYVEG-DMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVN 192
+ +V +N++I L G D E + L M+D PD+ T + G ++
Sbjct: 197 RSIVS----WNSMISSLSKCGRDREALELFCE-MIDQGFDPDEATVVTVLPISASLGVLD 251
Query: 193 EAFKFHSKILENNLIEDAFS-HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSL 251
HS + L +D + N L+++ C+S +L A + M R ++V++ +L
Sbjct: 252 TGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR----NVVSWNTL 307
Query: 252 IDGHCKEGNVENAVQVYEKMMKSGE-KPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMN 310
I G G E + +++ M++ G+ PN + V+ C M
Sbjct: 308 ISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVL--ACCSYTGQVERGEELFGLMME 365
Query: 311 LFDVIT----YNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
F + Y +++ SG+I EAF F +KN + AN A + +L++ G ++
Sbjct: 366 RFKLEARTEHYGAMVDLMSRSGRITEAFKF---LKNMPVNANAAMWGSLLSACRSHGDVK 422
Query: 367 QAK----ELMKV 374
A+ EL+K+
Sbjct: 423 LAEVAAMELVKI 434
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 143/349 (40%), Gaps = 51/349 (14%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
PNV+ FN +I +G +L S M+ +++ D TY L+ + L
Sbjct: 65 PNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWA---DEYTYAPLLKSCSSLSDLRFG 121
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
+ + E++ + +++ Y+ + +A ++ DEM ++ N V++N +I
Sbjct: 122 KCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSER----NVVVWNLMIRG 177
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
GD+E L M + I +++ + L + G EA + ++++ D
Sbjct: 178 FCDSGDVERGLHLFKQMSERSI----VSWNSMISSLSKCGRDREALELFCEMIDQGFDPD 233
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFG-SLIDGHCKEGNVENAVQVY 268
+ ++ L K + ++ GL D +T G +L+D +CK G++E A ++
Sbjct: 234 EATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIF 293
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG 328
KM + +V+++NTLI+G +G
Sbjct: 294 RKMQRR--------------------------------------NVVSWNTLISGSAVNG 315
Query: 329 KIDEAFAFSFAMKNAG-IAANHATYNTLINFLCKLGHIQQAKELMKVMI 376
K + AM G +A N AT+ ++ G +++ +EL +M+
Sbjct: 316 KGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMM 364
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I +L K + EA+ +F + G P+ T ++ ++ +G +D + S E
Sbjct: 203 NSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAES 262
Query: 61 MSVYSIRPDSITY-NCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
++ D IT N L+ +CK G L A + +M +++V ++ TLI G +
Sbjct: 263 SGLF---KDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVV----SWNTLISGSAVNG 315
Query: 120 SLEEAFRLCDEMMKKGLVM-NSVIYNTVIHWLYVEGDMEGVSLLISSMVDN-RIPPDKFT 177
E L D M+++G V N + V+ G +E L M++ ++
Sbjct: 316 KGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEH 375
Query: 178 YSILTKGLCRNGNVNEAFKF 197
Y + + R+G + EAFKF
Sbjct: 376 YGAMVDLMSRSGRITEAFKF 395
>AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9158380-9159897 FORWARD
Length = 505
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 9/256 (3%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
+V+ L +L + ++ F+ G NV T N ++ CK ++ A V K++
Sbjct: 150 RIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKE 209
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
I+PD ITY +I GFC +G L A KL N MM++ ++ +++ +
Sbjct: 210 F----IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQ 265
Query: 121 LEEAFRLCDEMM-KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS 179
+EA ++ M+ K+G ++ Y +I WL G ++ + M + + D T++
Sbjct: 266 FDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWA 325
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
L GL V EA+ ++E D ++ LI L + S A ++ M R
Sbjct: 326 SLIYGLLVKRRVVEAY----GLVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQR 381
Query: 240 GLVPDIVTFGSLIDGH 255
G P + T+ L+ GH
Sbjct: 382 GCEPIMHTYLMLLQGH 397
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 15/195 (7%)
Query: 101 IVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVS 160
I P+ TY T+I G+ L EA +L + MM +G ++ ++ L + + S
Sbjct: 211 IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEAS 270
Query: 161 LLISSMVDNRIPP-DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINY 219
+ MV R D Y ++ LC+NG ++ A K ++ E + D + LI
Sbjct: 271 KVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYG 330
Query: 220 LCRSNNLSGAKQLLASMYVRGLV-----PDIVTFGSLIDGHCKEGNVENAVQVYEKMMKS 274
L K+ + Y GLV PDI + LI G K A +V+ KM++
Sbjct: 331 LL-------VKRRVVEAY--GLVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQR 381
Query: 275 GEKPNLVLYNSVING 289
G +P + Y ++ G
Sbjct: 382 GCEPIMHTYLMLLQG 396
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 46/265 (17%)
Query: 68 PD----SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEE 123
PD S T N ++ + + +L E+ ++ +V N +T+ ++ + AR L++
Sbjct: 106 PDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLV-NDKTFRIVLKTLASARELKK 164
Query: 124 AFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTK 183
M G + N N + L E +E + + + I PD+ TY + +
Sbjct: 165 CVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEF-IKPDEITYRTMIQ 223
Query: 184 GLCRNGNVNEAFKFHS---------------KILENNLIEDAFS---------------- 212
G C G++ EA K + KI+E L ++ F
Sbjct: 224 GFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGD 283
Query: 213 -----HNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQV 267
+ ++I++LC++ + A+++ M RG+ D +T+ SLI G + V A +
Sbjct: 284 LDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGL 343
Query: 268 YEKMMKSGEKPNLVLYNSVINGLCK 292
E + E P++ +Y+ +I GL K
Sbjct: 344 VEGV----ENPDISIYHGLIKGLVK 364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 94/237 (39%), Gaps = 2/237 (0%)
Query: 195 FKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDG 254
F +S+ + + + N ++ + S N+ +L + RGLV D TF ++
Sbjct: 97 FFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVND-KTFRIVLKT 155
Query: 255 HCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDV 314
++ V + M G N+ N + LCKE+ D
Sbjct: 156 LASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDE 215
Query: 315 ITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
ITY T+I G+C+ G + EA M + G + ++ L K +A ++ V
Sbjct: 216 ITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYV 275
Query: 375 MI-LQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLL 430
M+ +G D Y ++I K + K+ D M +GV T+ +++ LL
Sbjct: 276 MVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLL 332
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 158/378 (41%), Gaps = 18/378 (4%)
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
M + + P TY+ ++ G K+G ++ + + ++ D + ++ L+D Y
Sbjct: 291 MLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGD 350
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIP-PDKFTYS 179
+ EAF + + LV +N++I G E L+ ++ P PD++T+S
Sbjct: 351 MREAFYVFGRIHNPNLVS----WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFS 406
Query: 180 ILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
H ++ + F L++ ++ A+++ M R
Sbjct: 407 AAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKER 466
Query: 240 GLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXX 299
D+V + +I GH + GN E AVQ + +M + + + +SVI G C +
Sbjct: 467 ----DVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVI-GACSDMAMLRQ 521
Query: 300 XXXXXXXXXMNLFDVITY--NTLINGYCNSGKIDEAFA-FSFAMKNAGIAANHATYNTLI 356
FD + L++ Y +GK + A FS A + +N+++
Sbjct: 522 GEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN-----PDLKCWNSML 576
Query: 357 NFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVI 416
+ G +++A + ++ GF+PD +TY L+ + S + S + L + M +G+
Sbjct: 577 GAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIK 636
Query: 417 PHKQTYKAVVSPLLQEGV 434
+ Y +V+ + + G+
Sbjct: 637 AGFKHYSCMVNLVSKAGL 654
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 133/288 (46%), Gaps = 18/288 (6%)
Query: 10 ECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPD 69
C LE + + H NVV++N + + D A M+ ++P+
Sbjct: 144 RCGSLEQARKVFDKMPH---RNVVSYNALYSAYSR--NPDFASYAFPLTTHMAFEYVKPN 198
Query: 70 SITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCD 129
S T+ L+ + + M L +++++ NV +++ YS LE A R+ D
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
Query: 130 EMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNG 189
+ + ++V +NT+I +E + +M+ + + P +FTYSI+ G + G
Sbjct: 259 CVNNR----DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
Query: 190 NVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV--PDIVT 247
+ + H++I+ ++ + D N L++ C ++ A YV G + P++V+
Sbjct: 315 SYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA------FYVFGRIHNPNLVS 368
Query: 248 FGSLIDGHCKEGNVENAVQVYEKMMK-SGEKPNLVLYNSVINGLCKEE 294
+ S+I G + G E A+ +Y ++++ S +P+ +++ I+ + E
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPE 416
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 122/296 (41%), Gaps = 16/296 (5%)
Query: 111 LIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSL-LISSMVDN 169
LI Y R SLE+A ++ D+M + N V YN + D + L + M
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHR----NVVSYNALYSAYSRNPDFASYAFPLTTHMAFE 193
Query: 170 RIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGA 229
+ P+ T++ L + +V +S+I++ ++ ++ +L A
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 230 KQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVING 289
+++ + R D V + ++I G K +E+ + + M+ SG P Y+ V+NG
Sbjct: 254 RRIFDCVNNR----DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNG 309
Query: 290 LCK-EEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAAN 348
K +L D+ N L++ YC+ G + EAF + N N
Sbjct: 310 CSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHN----PN 365
Query: 349 HATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVI 404
++N++I+ + G +QA LM +L+ P YT + S PE +
Sbjct: 366 LVSWNSIISGCSENGFGEQAM-LMYRRLLRMSTPRPDEYT-FSAAISATAEPERFV 419
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 144/318 (45%), Gaps = 20/318 (6%)
Query: 85 KLTMAEKLKNEMMEKDIVPNVRTYATL----IDGYSRARSLEEAFRLCDEMMKKGLVMNS 140
+L +A ++ + K ++ + + L +D Y++ + A + D + K NS
Sbjct: 71 RLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTAWNS 130
Query: 141 VI--YNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFH 198
++ Y+++ G V S+ +N+I P+KFT+SI+ R NV + H
Sbjct: 131 MLSMYSSI-------GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 199 SKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
+++ L +++ L++ + + +S A+++ + + P+ V + L G+ K
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI----VDPNTVCWTCLFSGYVKA 239
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYN 318
G E AV V+E+M G +P+ + + +VIN + M+ DV+ +N
Sbjct: 240 GLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIR---LGKLKDARLLFGEMSSPDVVAWN 296
Query: 319 TLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQ 378
+I+G+ G A + F M+ + + + +T ++++ + + ++ + I
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL 356
Query: 379 GFVPDYITYTILITSFSK 396
G + + L++ +SK
Sbjct: 357 GLASNIYVGSSLVSMYSK 374
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 170/399 (42%), Gaps = 54/399 (13%)
Query: 30 PNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMA 89
P+VV +N++I K G +A++ M SV S R T ++ + L +
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRS---TLGSVLSAIGIVANLDLG 346
Query: 90 EKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHW 149
+ E ++ + N+ ++L+ YS+ +E A ++ + + +K N V +N +I
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK----NDVFWNAMIRG 402
Query: 150 LYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIED 209
G+ V L M + D FT++ L + ++ +FHS I++ L ++
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 210 AFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
F N L++ + L A+Q+ M R D VT+ ++I + ++ N A +++
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDR----DNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 270 KMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGK 329
+M G V +G C L + T ++G +
Sbjct: 519 RMNLCG---------IVSDGAC-------------------LASTLKACTHVHGLYQGKQ 550
Query: 330 IDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY--ITY 387
+ ++K G+ + T ++LI+ K G I+ A+++ + P++ ++
Sbjct: 551 V-----HCLSVK-CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL------PEWSVVSM 598
Query: 388 TILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV 426
LI +S+ + EE + L M+ +GV P + T+ +V
Sbjct: 599 NALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIV 636
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 165/413 (39%), Gaps = 82/413 (19%)
Query: 13 LLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSIT 72
L + V S+K G+ ++ T + +ID+ K G + A KV S + SV S+
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM------ 598
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
N LI G+ + L A L EM+ + + P+ T+AT+++ + SL + ++
Sbjct: 599 -NALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 656
Query: 133 KKG--------------LVMNS-------------------VIYNTVIHWLYVEGDMEGV 159
K+G + MNS V++ ++ G E
Sbjct: 657 KRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716
Query: 160 SLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINY 219
M + + PD+ T+ + + ++ E HS I D + N LI+
Sbjct: 717 LKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDM 776
Query: 220 LCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPN 279
+ ++ G+ Q+ M R ++V++ SLI+G+ K G E+A+++++ M +S P
Sbjct: 777 YAKCGDMKGSSQVFDEMRRR---SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMP- 832
Query: 280 LVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFA-FSF 338
D IT+ ++ ++GK+ + F
Sbjct: 833 ---------------------------------DEITFLGVLTACSHAGKVSDGRKIFEM 859
Query: 339 AMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILI 391
+ GI A +++ L + G++Q+A + ++ Q PD ++ L+
Sbjct: 860 MIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEA---QNLKPDARLWSSLL 909
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/467 (19%), Positives = 191/467 (40%), Gaps = 60/467 (12%)
Query: 4 IYALCKECKLLEAMSVFYRSL-KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMS 62
+ + C LE S F+ + K + N+ N ++D+ K GA++ A ++ +M
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM---- 489
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVP------------------- 103
D++T+N +IG + + + A L M IV
Sbjct: 490 ---CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLY 546
Query: 104 ----------------NVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLV-MNSVIYNTV 146
++ T ++LID YS+ +++A ++ + + +V MN++I
Sbjct: 547 QGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG-- 604
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNL 206
Y + ++E +L M+ + P + T++ + + + ++ +FH +I +
Sbjct: 605 ----YSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF 660
Query: 207 IEDAFSHNI-LINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAV 265
+ I L+ S ++ A L + + IV + ++ GH + G E A+
Sbjct: 661 SSEGEYLGISLLGMYMNSRGMTEACALFSEL---SSPKSIVLWTGMMSGHSQNGFYEEAL 717
Query: 266 QVYEKMMKSGEKPNLVLYNSVINGLCK--EEXXXXXXXXXXXXXXMNLFDVITYNTLING 323
+ Y++M G P+ + +V+ +C + D +T NTLI+
Sbjct: 718 KFYKEMRHDGVLPDQATFVTVLR-VCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDM 776
Query: 324 YCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPD 383
Y G + + M+ +N ++N+LIN K G+ + A ++ M +PD
Sbjct: 777 YAKCGDMKGSSQVFDEMRR---RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPD 833
Query: 384 YITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLL 430
IT+ ++T+ S + K+ + M+ + I + + A + LL
Sbjct: 834 EITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 155/398 (38%), Gaps = 23/398 (5%)
Query: 18 SVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLI 77
+V +SL GI N I+D+ K + A K +E D +N ++
Sbjct: 81 AVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE--------KDVTAWNSML 132
Query: 78 GGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLV 137
+ +GK + + E I PN T++ ++ +R ++E ++ M+K GL
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 138 MNSVIYNTVIHWLYVEGD-MEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFK 196
NS ++ +Y + D + + +VD P+ ++ L G + G EA
Sbjct: 193 RNSYCGGALVD-MYAKCDRISDARRVFEWIVD----PNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 197 FHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHC 256
++ + D + +IN R L A+ L M PD+V + +I GH
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDVVAWNVMISGHG 303
Query: 257 KEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVI 315
K G A++ + M KS K SV++ + + L ++
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY 363
Query: 316 TYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVM 375
++L++ Y K++ A A++ N +N +I G + EL M
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEE----KNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 376 ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLK 413
G+ D T+T L+++ + E + H ++ K
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/399 (19%), Positives = 176/399 (44%), Gaps = 18/399 (4%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
+ VT+N +I+ + G + A+++ +M + + PDS T L+ G L +
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDG---LEPDSNTLASLVVACSADGTLFRGQ 409
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWL 150
+L + N + L++ Y++ +E A + + V N V++N ++
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL----DYFLETEVENVVLWNVMLVAY 465
Query: 151 YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
+ D+ + M I P+++TY + K R G++ + HS+I++ N +A
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
+ ++LI+ + L A +L +R D+V++ ++I G+ + + A+ + +
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDIL----IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF--DVITYNTLINGYCNSG 328
M+ G + + V + ++ C ++ F D+ N L+ Y G
Sbjct: 582 MLDRGIRSDEVGLTNAVSA-CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 329 KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYT 388
KI+E++ +F AG ++ +N L++ + G+ ++A + M +G + T+
Sbjct: 641 KIEESY-LAFEQTEAG---DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Query: 389 ILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVS 427
+ + S+ + ++ ++H + G + A++S
Sbjct: 697 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALIS 735
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 161/370 (43%), Gaps = 25/370 (6%)
Query: 66 IRPDSITYNCLIGGFCKM-GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEA 124
IRP+ T L+ G K G L KL +++++ + N L D Y L A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 125 FRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKG 184
F++ DEM ++ + +N +I L + V L MV + P++ T+S + +
Sbjct: 140 FKVFDEMPERTIF----TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA 195
Query: 185 LCRNGNVNEAF----KFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
CR G+V AF + H++IL L + N LI+ R+ + A+++ + ++
Sbjct: 196 -CRGGSV--AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK- 251
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
D ++ ++I G K A++++ M G P ++SV++ K E
Sbjct: 252 ---DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308
Query: 301 XXXXXXXXMNLFDVITY--NTLINGYCNSGK-IDEAFAFSFAMKNAGIAANHATYNTLIN 357
+ F TY N L++ Y + G I FS + + TYNTLIN
Sbjct: 309 QLHGLVLKLG-FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV-----TYNTLIN 362
Query: 358 FLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIP 417
L + G+ ++A EL K M L G PD T L+ + S + +LH Y G
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 418 HKQTYKAVVS 427
+ + A+++
Sbjct: 423 NNKIEGALLN 432
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 167/403 (41%), Gaps = 27/403 (6%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
N +I L + E +F R + + PN TF+ +++ AC+ G+ +A VV ++
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE-ACRGGS--VAFDVVEQIHA 211
Query: 61 MSVYS-IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+Y +R ++ N LI + + G + +A ++ + + KD ++ +I G S+
Sbjct: 212 RILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD----HSSWVAMISGLSKNE 267
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTV------IHWLYVEGDMEGVSLLISSMVDNRIPP 173
EA RL +M G++ +++V I L + + G+ L +
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG------FSS 321
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
D + + L GN+ A I N DA ++N LIN L + A +L
Sbjct: 322 DTYVCNALVSLYFHLGNLISA----EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 234 ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
M++ GL PD T SL+ +G + Q++ K G N + +++N K
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 294 EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYN 353
N V+ +N ++ Y + +F M+ I N TY
Sbjct: 438 ADIETALDYFLETEVEN---VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 354 TLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSK 396
+++ +LG ++ +++ +I F + ++LI ++K
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 537
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 154/365 (42%), Gaps = 21/365 (5%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
+V Y L + L + +F + I PN T+ I+ ++G ++L ++ S++ +
Sbjct: 462 LVAYGLLDD--LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI-IK 518
Query: 62 SVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
+ + + ++ + LI + K+GKL A + KD+V ++ T+I GY++
Sbjct: 519 TNFQL--NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV----SWTTMIAGYTQYNFD 572
Query: 122 EEAFRLCDEMMKKGLVMNSV-IYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
++A +M+ +G+ + V + N V ++ EG + + V F ++
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNAL 632
Query: 181 LTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
+T R G + E++ E D + N L++ +S N A ++ M G
Sbjct: 633 VTL-YSRCGKIEESYL----AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 687
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXX 300
+ + TFGS + + N++ QV+ + K+G + N++I+ K
Sbjct: 688 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 747
Query: 301 XXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLC 360
N +++N +IN Y G EA M ++ + NH TL+ L
Sbjct: 748 KQFLEVSTKN---EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHV---TLVGVLS 801
Query: 361 KLGHI 365
HI
Sbjct: 802 ACSHI 806
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 170/415 (40%), Gaps = 43/415 (10%)
Query: 1 NVVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEV 60
NV+I + K E ++ + R + GI P+ T+ ++ AC +D+A V +
Sbjct: 113 NVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLK-ACGE-TLDVAFGRVVHGSI 170
Query: 61 MSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARS 120
V S + N LI + + + +A +L + M E+D V ++ +I+ Y+
Sbjct: 171 -EVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAV----SWNAVINCYASEGM 225
Query: 121 LEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSI 180
EAF L D+M G+ ++ + +N + G+ G LIS M + D I
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 181 LTK-----GLCRNGNVNEAFKFHSKI-----LENNLIE-----DAFSHNILI------NY 219
K G R G HS + N LI H +++ N
Sbjct: 286 GLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENS 345
Query: 220 LCRSNNL-SG---------AKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYE 269
LC N++ SG A LL M V G P+ +T S++ + N+++ + +
Sbjct: 346 LCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHC 405
Query: 270 KMMKSG-EKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSG 328
+++ K +L+NS+++ K M+ D +TY +LI+GY N G
Sbjct: 406 YILRRKCFKDYTMLWNSLVDVYAKS---GKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQG 462
Query: 329 KIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKEL-MKVMILQGFVP 382
+ A A M +GI +H T +++ + + + L MK+ G P
Sbjct: 463 EGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRP 517
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 92/192 (47%), Gaps = 17/192 (8%)
Query: 101 IVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDM-EGV 159
+VP + T+ + + ++ A+S+ ++ +++ + +N +I Y + ++ E V
Sbjct: 80 LVPKLVTFYSAFNLHNEAQSI----------IENSDILHPLPWNVLIA-SYAKNELFEEV 128
Query: 160 SLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINY 219
MV I PD FTY + K +V H I ++ + N LI+
Sbjct: 129 IAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISM 188
Query: 220 LCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPN 279
R N+ A++L M+ R D V++ ++I+ + EG A ++++KM SG + +
Sbjct: 189 YKRFRNMGIARRLFDRMFER----DAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVS 244
Query: 280 LVLYNSVINGLC 291
++ +N +I+G C
Sbjct: 245 VITWN-IISGGC 255
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 122/254 (48%), Gaps = 19/254 (7%)
Query: 36 NMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNE 95
N ++ + K+G M A V M+ DS+++N LI G + +++ A +L +
Sbjct: 314 NSLMSMYSKLGYMGEAKAVFGVMK-------NKDSVSWNSLITGLVQRKQISEAYELFEK 366
Query: 96 MMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGD 155
M KD+V ++ +I G+S + + L M +K +++ + +I G
Sbjct: 367 MPGKDMV----SWTDMIKGFSGKGEISKCVELFGMMPEK----DNITWTAMISAFVSNGY 418
Query: 156 MEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNI 215
E M+ + P+ +T+S + ++ E + H ++++ N++ D N
Sbjct: 419 YEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNS 478
Query: 216 LINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
L++ C+ N + A ++ + + P+IV++ ++I G+ G + A++++ + SG
Sbjct: 479 LVSMYCKCGNTNDAYKIFSCIS----EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSG 534
Query: 276 EKPNLVLYNSVING 289
++PN V + ++++
Sbjct: 535 KEPNGVTFLALLSA 548
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 183/409 (44%), Gaps = 37/409 (9%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMGKLTMAE 90
+ V N+++ + G + A++V M V V ++ + ++ G+CKMG++ A
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEV-------VSCSSMVHGYCKMGRIVDAR 228
Query: 91 KLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLV-MNS----VIYNT 145
L + M E++++ T+ +IDGY +A E+ F L M ++G V +NS V++
Sbjct: 229 SLFDRMTERNVI----TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKA 284
Query: 146 VIHWL-YVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
++ Y EG + L+S M + D F + L + G + EA K +++N
Sbjct: 285 CRDFVRYREGSQ--IHGLVSRMP---LEFDLFLGNSLMSMYSKLGYMGEA-KAVFGVMKN 338
Query: 205 NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENA 264
+D+ S N LI L + +S A +L M + D+V++ +I G +G +
Sbjct: 339 ---KDSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKC 391
Query: 265 VQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGY 324
V+++ M + + ++ ++ EE N + T++++++
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSY---TFSSVLSAT 448
Query: 325 CNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDY 384
+ + E + I + + N+L++ CK G+ A ++ + P+
Sbjct: 449 ASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS----EPNI 504
Query: 385 ITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEG 433
++Y +I+ +S ++ +KL + G P+ T+ A++S + G
Sbjct: 505 VSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 171/418 (40%), Gaps = 76/418 (18%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWP----NVVTFNMIIDVACKMGAMDLALKVVSK 57
+ +YA C+ +L A +VF G+ P +V++ I+ + G AL++ S+
Sbjct: 161 IALYAKCR--RLGSARTVF-----EGL-PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 58 MEVMSVYSIRPDSITYNCLIGGFC-----KMGKLTMAEKLKNEM-MEKDIVPNVRTYATL 111
M M V +PD + ++ F K G+ A +K + +E D++ ++ T
Sbjct: 213 MRKMDV---KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM--- 266
Query: 112 IDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRI 171
Y++ + A L D+M L++ +N +I G + M++ +
Sbjct: 267 ---YAKCGQVATAKILFDKMKSPNLIL----WNAMISGYAKNGYAREAIDMFHEMINKDV 319
Query: 172 PPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQ 231
PD + + + G++ +A + + ++ +D F + LI+ + ++ GA+
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 232 LLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLC 291
+ + R L D+V + ++I G+ G A+ +Y M + G PN V
Sbjct: 380 V----FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV---------- 425
Query: 292 KEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHAT 351
T+ L+ +SG + E + F M + I
Sbjct: 426 ------------------------TFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQH 461
Query: 352 YNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDY 409
Y +I+ L + GH+ QA E++K M +Q P + L+++ C ++L +Y
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQ---PGVTVWGALLSA----CKKHRHVELGEY 512
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 135/341 (39%), Gaps = 56/341 (16%)
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
LI G +T A ++ +++ I P + +I GYSR ++A
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFP----WNAIIRGYSRNNHFQDAL---------- 104
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
L+ S+M R+ PD FT+ L K ++
Sbjct: 105 -------------------------LMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGR 139
Query: 196 KFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPD--IVTFGSLID 253
H+++ D F N LI + L A+ + + +P+ IV++ +++
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL----PLPERTIVSWTAIVS 195
Query: 254 GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFD 313
+ + G A++++ +M K KP+ V SV+N + M L
Sbjct: 196 AYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI 255
Query: 314 ----VITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAK 369
+I+ NT+ Y G++ A MK + N +N +I+ K G+ ++A
Sbjct: 256 EPDLLISLNTM---YAKCGQVATAKILFDKMK----SPNLILWNAMISGYAKNGYAREAI 308
Query: 370 ELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYM 410
++ MI + PD I+ T I++ ++ S E+ +++Y+
Sbjct: 309 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
>AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:172256-174137 FORWARD
Length = 577
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%)
Query: 107 TYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSM 166
TY T++D + A ++ + + M +KG+++++V Y ++IHW+ GD++G L M
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 167 VDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNL 226
DN P +Y+ K L +G V EA + + ++L + + + ++ +L+ YL +
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 227 SGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSG 275
A + M G+ PD LI K G +V M ++G
Sbjct: 244 EEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENG 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%)
Query: 69 DSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLC 128
D TY ++ F + G++ + + M EK ++ + TY +LI S + ++ A RL
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 129 DEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRN 188
+EM G V Y + L+ +G +E + + M+ +R+ P+ TY++L + L
Sbjct: 181 EEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVAT 240
Query: 189 GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLV 242
G EA K+ E + D + NILI + S ++L M G+V
Sbjct: 241 GKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVV 294
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 90/232 (38%), Gaps = 34/232 (14%)
Query: 174 DKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLL 233
D FTY+ + G + + + E ++ D ++ LI+++ S ++ GA +L
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 234 ASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKE 293
M G P +V++ + + +G VE A +VY++M++S PN C
Sbjct: 181 EEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPN-----------CH- 228
Query: 294 EXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYN 353
TY L+ +GK +EA F M+ G+ + A N
Sbjct: 229 ----------------------TYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACN 266
Query: 354 TLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIK 405
LI K G ++ M G V Y + + + +++++
Sbjct: 267 ILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLR 318
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%)
Query: 311 LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKE 370
L D +TY +LI+ +SG +D A M++ G +Y + L G +++A E
Sbjct: 154 LIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATE 213
Query: 371 LMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLL 430
+ K M+ P+ TYT+L+ EE + + M GV P K +++ L
Sbjct: 214 VYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKAL 273
Query: 431 QEG 433
+ G
Sbjct: 274 KFG 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 313 DVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELM 372
D TY T+++ + +G+I ++ MK G+ + TY +LI+++ G + A L
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 373 KVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQE 432
+ M G P ++YT + EE +++ M+ V P+ TY ++ L+
Sbjct: 181 EEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVAT 240
Query: 433 G 433
G
Sbjct: 241 G 241
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 24/287 (8%)
Query: 7 LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSI 66
L + +L EA F G+ PN +TF +A G D + +++ Y+
Sbjct: 46 LTRNGRLAEAAKEFSDMTLAGVEPNHITF-----IALLSGCGDFTSGSEALGDLLHGYAC 100
Query: 67 -----RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSL 121
R + +IG + K G+ A + + M +K+ V T+ T+IDGY R+ +
Sbjct: 101 KLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSV----TWNTMIDGYMRSGQV 156
Query: 122 EEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSIL 181
+ A ++ D+M ++ L+ + + N + +G E L M + + PD + I
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVK----KGYQEEALLWFREMQISGVKPD-YVAIIA 211
Query: 182 TKGLCRN-GNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRG 240
C N G ++ H +L + + N LI+ CR + A+Q+ +M R
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR- 270
Query: 241 LVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVI 287
+V++ S+I G GN ++ + KM + G KP+ V + +
Sbjct: 271 ---TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGAL 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 144/353 (40%), Gaps = 15/353 (4%)
Query: 65 SIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEA 124
S ++++ I + G+L A K ++M + PN T+ L+ G S EA
Sbjct: 31 STSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEA 90
Query: 125 FR--LCDEMMKKGLVMNSVIYNTVIHWLYVE-GDMEGVSLLISSMVDNRIPPDKFTYSIL 181
L K GL N V+ T I +Y + G + L+ M D + T++ +
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK----NSVTWNTM 146
Query: 182 TKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGL 241
G R+G V+ A K K+ E +LI S +IN + A M + G+
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLI----SWTAMINGFVKKGYQEEALLWFREMQISGV 202
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXX 301
PD V + ++ G + + V+ ++ K N+ + NS+I+ C+
Sbjct: 203 KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCR---CGCVEF 259
Query: 302 XXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCK 361
M V+++N++I G+ +G E+ + M+ G + T+ +
Sbjct: 260 ARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSH 319
Query: 362 LGHIQQAKELMKVMILQGFV-PDYITYTILITSFSKKCSPEEVIKLHDYMVLK 413
+G +++ ++M + P Y L+ +S+ E+ +KL M +K
Sbjct: 320 VGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 107/272 (39%), Gaps = 39/272 (14%)
Query: 31 NVVTFNMIIDVACKMGAMDLALKVVSKM----------------------------EVMS 62
N VT+N +ID + G +D A K+ KM M
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQ 198
Query: 63 VYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLE 122
+ ++PD + + +G L+ + ++ +D NVR +LID Y R +E
Sbjct: 199 ISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVE 258
Query: 123 EAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILT 182
A ++ M K+ +V +N+VI G+ + M + PD T++
Sbjct: 259 FARQVFYNMEKRTVVS----WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGAL 314
Query: 183 KGLCRNGNVNEAFKFHSKILENNLIEDAFSH-NILINYLCRSNNLSGAKQLLASMYVRGL 241
G V E ++ + + I H L++ R+ L A +L+ SM ++
Sbjct: 315 TACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK-- 372
Query: 242 VPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
P+ V GSL+ G N + + E++MK
Sbjct: 373 -PNEVVIGSLLAACSNHG---NNIVLAERLMK 400
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 15/250 (6%)
Query: 22 RSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFC 81
++L+ G+ ++ T N +I V + +D AL++ + + + D +TYN LI G
Sbjct: 142 QALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDE-------NPQRDVVTYNVLIDGLV 194
Query: 82 KMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSV 141
K ++ A +L + M +D+V ++ +LI GY++ EA +L DEM+ GL ++V
Sbjct: 195 KAREIVRARELFDSMPLRDLV----SWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNV 250
Query: 142 IYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKI 201
+ + GD + + R+ D F + L + G ++ A +
Sbjct: 251 AIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELC 310
Query: 202 LENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNV 261
+ L F+ N +I L N M G+ PD VTF S++ G G V
Sbjct: 311 SDKTL----FTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 262 ENAVQVYEKM 271
+ A ++++M
Sbjct: 367 DEARNLFDQM 376
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 13/258 (5%)
Query: 154 GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSH 213
GD+ V L + + D FT + L + ++ A + + + N D ++
Sbjct: 131 GDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQ----LFDENPQRDVVTY 186
Query: 214 NILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMK 273
N+LI+ L ++ + A++L SM +R D+V++ SLI G+ + + A++++++M+
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDEMVA 242
Query: 274 SGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLF-DVITYNTLINGYCNSGKIDE 332
G KP+ V S ++ + LF D L++ Y G ID
Sbjct: 243 LGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDT 302
Query: 333 AFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILIT 392
A + + T+N +I L G+ + + + M+ G PD +T+ ++
Sbjct: 303 AMEIFELCSDKTLF----TWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLV 358
Query: 393 SFSKKCSPEEVIKLHDYM 410
S +E L D M
Sbjct: 359 GCSHSGLVDEARNLFDQM 376
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 107/261 (40%), Gaps = 22/261 (8%)
Query: 185 LCRNGNVNEAFKFHSKILENNLIEDAFSHN-----ILINYLCRSNNLSGAKQLL--ASMY 237
LCR + +FH++ + + I + F N +L S + S +K+++ A+
Sbjct: 13 LCRT--LKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSV 70
Query: 238 VRGLV-PDIVTFGSLID-GHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEX 295
R + P F ++I E + ++ + + +M + P+ + V ++
Sbjct: 71 FRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKN 130
Query: 296 XXXXXXXXXXXXXMN---LFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY 352
+ L D+ T NTLI Y ID A + + + TY
Sbjct: 131 GDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQ----LFDENPQRDVVTY 186
Query: 353 NTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVL 412
N LI+ L K I +A+EL M L+ D +++ LI+ +++ E IKL D MV
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDEMVA 242
Query: 413 KGVIPHKQTYKAVVSPLLQEG 433
G+ P + +S Q G
Sbjct: 243 LGLKPDNVAIVSTLSACAQSG 263
>AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30148738-30149931 FORWARD
Length = 397
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 80/190 (42%), Gaps = 1/190 (0%)
Query: 209 DAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVY 268
DA S NI I C L GA + M GL PD+VT+ +LI K ++
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 269 EKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNL-FDVITYNTLINGYCNS 327
M+ G KPNL +N I L + + D ITYN +I G+ +
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 328 GKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITY 387
D A AM G N Y T+I++LCK G+ A + K + + + P+ T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 388 TILITSFSKK 397
+L+ KK
Sbjct: 356 EMLLKGLVKK 365
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 14/261 (5%)
Query: 15 EAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKM--EVMSVYSIRPDSIT 72
+A+ F+ +G +V +FN + V + + L + + + S Y I D+++
Sbjct: 124 QALDTFFNMDLYGCKRSVKSFNAALQVL----SFNPDLHTIWEFLHDAPSKYGIDIDAVS 179
Query: 73 YNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMM 132
+N I FC++G L A EM + + P+V TY TLI + L + M+
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMV 239
Query: 133 KKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKG--LCRNGN 190
KG N +N I +L + L+ M ++ PD TY+++ KG L R +
Sbjct: 240 LKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPD 299
Query: 191 VNEAF--KFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTF 248
+ E H K + NL + +I+YLC++ N A + + P++ T
Sbjct: 300 MAERVYTAMHGKGYKPNLK----IYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 249 GSLIDGHCKEGNVENAVQVYE 269
L+ G K+G ++ A + E
Sbjct: 356 EMLLKGLVKKGQLDQAKSIME 376
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 3/215 (1%)
Query: 25 KHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKMG 84
K+GI + V+FN+ I C++G +D A + +ME + PD +TY LI K
Sbjct: 170 KYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSG---LTPDVVTYTTLISALYKHE 226
Query: 85 KLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYN 144
+ + L N M+ K PN+ T+ I R +A L M K + +S+ YN
Sbjct: 227 RCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYN 286
Query: 145 TVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILEN 204
VI ++ + + ++M P+ Y + LC+ GN + A+ +
Sbjct: 287 MVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRK 346
Query: 205 NLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVR 239
+ + +L+ L + L AK ++ ++ R
Sbjct: 347 KWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 27 GIWPNVVTFNM----IIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCK 82
G PN+ TFN+ +++ A DL L +M + PDSITYN +I GF
Sbjct: 242 GCKPNLTTFNVRIQFLVNRRRAWDANDLLL-------LMPKLQVEPDSITYNMVIKGFFL 294
Query: 83 MGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVI 142
MAE++ M K PN++ Y T+I +A + + A+ +C + M+K N
Sbjct: 295 ARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDT 354
Query: 143 YNTVIHWLYVEGDMEGVSLLISSMVDNRIPP 173
++ L +G ++ I +V R+PP
Sbjct: 355 VEMLLKGLVKKGQLDQAK-SIMELVHRRVPP 384
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 164/405 (40%), Gaps = 20/405 (4%)
Query: 7 LCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSI 66
LC + L AM HG+W + T++ +I A+ + +
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH---LYFNGH 92
Query: 67 RPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFR 126
RP N LI + K L A +L ++M +++++ ++ T+I YS+ + ++A
Sbjct: 93 RPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKALE 148
Query: 127 LCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLC 186
L M++ + N Y++V L M V +L ++ + D F S L
Sbjct: 149 LLVLMLRDNVRPNVYTYSSV---LRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFA 205
Query: 187 RNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIV 246
+ G +A + + + DA N +I +++ A +L M G + +
Sbjct: 206 KLGEPEDAL----SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261
Query: 247 TFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXX 306
T S++ +E +Q + ++K + +L+L N++++ CK
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVKYDQ--DLILNNALVDMYCK---CGSLEDALRVF 316
Query: 307 XXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQ 366
M DVIT++T+I+G +G EA MK++G N+ T ++ G ++
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 367 QAKELMKVM-ILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYM 410
+ M L G P Y +I K ++ +KL + M
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 141/327 (43%), Gaps = 25/327 (7%)
Query: 24 LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
+K G+ +V + +IDV K+G + AL V +M + D+I +N +IGGF +
Sbjct: 186 IKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM-------VTGDAIVWNSIIGGFAQN 238
Query: 84 GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMK--KGLVMNSV 141
+ +A +L M + T +++ + LE + ++K + L++N+
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNA 298
Query: 142 IYNTVIHWLYVE-GDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSK 200
+ + +Y + G +E + + M + D T+S + GL +NG EA K +
Sbjct: 299 LVD-----MYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLFER 349
Query: 201 ILENNLIEDAFSHNILINYLCRSNNL--SGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
++++ + + + + + C L G + + G+ P +G +ID K
Sbjct: 350 -MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 259 GNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYN 318
G +++AV++ +M +P+ V + +++ + ++ D TY
Sbjct: 409 GKLDDAVKLLNEMEC---EPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYT 465
Query: 319 TLINGYCNSGKIDEAFAFSFAMKNAGI 345
L N Y NS K D M++ GI
Sbjct: 466 LLSNIYANSQKWDSVEEIRTRMRDRGI 492
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 138/353 (39%), Gaps = 52/353 (14%)
Query: 119 RSLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTY 178
R L A + D + GL +S Y+ +I + +L+ + N P F
Sbjct: 40 RDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLV 99
Query: 179 SILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYV 238
++L + +N+A + ++ + N+I S +I+ + A +LL M
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 239 RGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXX 298
+ P++ T+ S++ C + + ++ ++K G + ++ + +++I+ K
Sbjct: 156 DNVRPNVYTYSSVLRS-C--NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAK---LGE 209
Query: 299 XXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATY------ 352
M D I +N++I G+ + + D A MK AG A AT
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 353 ---------------------------NTLINFLCKLGHIQQAKELMKVMILQGFVPDYI 385
N L++ CK G ++ A + M + D I
Sbjct: 270 CTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVI 325
Query: 386 TYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVV-----SPLLQEG 433
T++ +I+ ++ +E +KL + M G P+ T V+ + LL++G
Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 195/480 (40%), Gaps = 67/480 (13%)
Query: 2 VVIYALCKECKLLEAMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVM 61
V +Y+ C+ L +A VF + +W +VV++N II+ K+G +AL++ S+M
Sbjct: 169 VAMYSRCRS--LSDARKVFD---EMSVW-DVVSWNSIIESYAKLGKPKVALEMFSRM--T 220
Query: 62 SVYSIRPDSITY-----------------------------------NCLIGGFCKMGKL 86
+ + RPD+IT NCL+ + K G +
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMM 280
Query: 87 TMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIYNTV 146
A + + M KD+V ++ ++ GYS+ E+A RL ++M ++ + M+ V ++
Sbjct: 281 DEANTVFSNMSVKDVV----SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 147 IHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNE-------AFKFHS 199
I G + M+ + I P++ T + G G + A K+
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 200 KILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEG 259
+ +N ++ N LI+ + + A+ + S+ + D+VT+ +I G+ + G
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER--DVVTWTVMIGGYSQHG 454
Query: 260 NVENAVQVYEKMMKSG--EKPNLVLYNSVINGLCKEEXXX--XXXXXXXXXXXMNLFDVI 315
+ A+++ +M + +PN + + N +
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 316 TYNTLINGYCNSGKIDEA-FAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKV 374
N LI+ Y G I +A F M A N T+ +L+ G+ ++A +
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMM-----AKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 375 MILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYM-VLKGVIPHKQTYKAVVSPLLQEG 433
M GF D +T +++ + S ++ ++ + M + GV P + Y +V L + G
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 131/314 (41%), Gaps = 45/314 (14%)
Query: 60 VMSVYSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRAR 119
+M S PD+ T+ + ++ + E + + NV L+ YSR R
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 120 SLEEAFRLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRI--PPDKFT 177
SL +A ++ DEM V + V +N++I Y + V+L + S + N PD T
Sbjct: 177 SLSDARKVFDEMS----VWDVVSWNSIIE-SYAKLGKPKVALEMFSRMTNEFGCRPDNIT 231
Query: 178 YSILTKGLCRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMY 237
+ G + + H + + +I++ F N L++ + + A + ++M
Sbjct: 232 LVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS 291
Query: 238 VRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXX 297
V+ D+V++ +++ G+ + G E+AV+++EKM + K
Sbjct: 292 VK----DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK-------------------- 327
Query: 298 XXXXXXXXXXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLIN 357
DV+T++ I+GY G EA M ++GI N T ++++
Sbjct: 328 --------------MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 358 FLCKLGHIQQAKEL 371
+G + KE+
Sbjct: 374 GCASVGALMHGKEI 387
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 181/424 (42%), Gaps = 36/424 (8%)
Query: 24 LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
+K G+ NV N ++++ K G +A V +M V + S +N +I ++
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISS-------WNAMIALHMQV 225
Query: 84 GKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNSVIY 143
G++ +A +M E+DIV T+ ++I G+++ A + +M++ L+ S
Sbjct: 226 GQMDLAMAQFEQMAERDIV----TWNSMISGFNQRGYDLRALDIFSKMLRDSLL--SPDR 279
Query: 144 NTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYS-----ILTKGLCRNGNVNEAFKFH 198
T+ L ++E L I + + I F S L R G V A +
Sbjct: 280 FTLASVLSACANLE--KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337
Query: 199 SKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKE 258
+ +L + F+ L++ + +++ AK + S+ R D+V + ++I G+ +
Sbjct: 338 EQRGTKDLKIEGFT--ALLDGYIKLGDMNQAKNIFVSLKDR----DVVAWTAMIVGYEQH 391
Query: 259 GNVENAVQVYEKMMKSGEKPN-LVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITY 317
G+ A+ ++ M+ G++PN L + ++ V
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 318 NTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMIL 377
N LI Y +G I A S A + ++ ++I L + GH ++A EL + M++
Sbjct: 452 NALITMYAKAGNITSA---SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 508
Query: 378 QGFVPDYITYTILITSFSKKCSPEEVIKLHDYMV-LKGVIPHKQTYKAVV-----SPLLQ 431
+G PD+ITY + ++ + + + D M + +IP Y +V + LLQ
Sbjct: 509 EGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQ 568
Query: 432 EGVE 435
E E
Sbjct: 569 EAQE 572
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 165/442 (37%), Gaps = 87/442 (19%)
Query: 16 AMSVFYRSLKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNC 75
A V R +K G+ +V N +++V K G A K+ +M + + +S +N
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFS-------WNT 85
Query: 76 LIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKG 135
++ + K G + + +++ ++D V ++ T+I GY +A R+ +M+K+G
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSV----SWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 136 LVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAF 195
I P +FT + + + +
Sbjct: 142 -----------------------------------IEPTQFTLTNVLASVAATRCMETGK 166
Query: 196 KFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVP------------ 243
K HS I++ L + N L+N + + AK + M VR +
Sbjct: 167 KVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVG 226
Query: 244 ---------------DIVTFGSLIDGHCKEGNVENAVQVYEKMMK-SGEKPNLVLYNSVI 287
DIVT+ S+I G + G A+ ++ KM++ S P+ SV+
Sbjct: 227 QMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVL 286
Query: 288 NGLCKEEXXXXXXXXXXXXXXMNLFDV--ITYNTLINGYCNSGKIDEAFAF--SFAMKNA 343
+ C FD+ I N LI+ Y G ++ A K+
Sbjct: 287 SA-CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 344 GIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEV 403
I + L++ KLG + QAK + + + D + +T +I + + S E
Sbjct: 346 KIEG----FTALLDGYIKLGDMNQAKNIFVSLKDR----DVVAWTAMIVGYEQHGSYGEA 397
Query: 404 IKLHDYMVLKGVIPHKQTYKAV 425
I L MV G P+ T A+
Sbjct: 398 INLFRSMVGGGQRPNSYTLAAM 419
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 141/362 (38%), Gaps = 14/362 (3%)
Query: 66 IRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAF 125
R D + N L+ + K G L A K+ +M ++D V T+ TLI GYS+ +A
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFV----TWTTLISGYSQHDRPCDAL 146
Query: 126 RLCDEMMKKGLVMNSVIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGL 185
++M++ G N ++VI E L V + S L
Sbjct: 147 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Query: 186 CRNGNVNEAFKFHSKILENNLIEDAFSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDI 245
R G +++A + N + S N LI R + A +L M G P
Sbjct: 207 TRYGLMDDAQLVFDALESRNDV----SWNALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 246 VTFGSLIDGHCKEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXX 305
++ SL G +E V+ M+KSGEK N++++ K
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 306 XXXMNLFDVITYNTLINGYCNSGKIDEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHI 365
DV+++N+L+ Y G EA + M+ GI N ++ +++ G +
Sbjct: 323 LAKR---DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLL 379
Query: 366 QQAKELMKVMILQGFVPDYITYTILITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAV 425
+ ++M G VP+ Y ++ + ++ + M ++ P +KA+
Sbjct: 380 DEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIE---PTAAIWKAL 436
Query: 426 VS 427
++
Sbjct: 437 LN 438
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/404 (19%), Positives = 167/404 (41%), Gaps = 45/404 (11%)
Query: 64 YSIRPDSITYNCLIGGFCKMGKLTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEE 123
Y + I LI + + G + A L +EM ++D+V + +I GY+ +
Sbjct: 39 YKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVV----AWTAMITGYASSNYNAR 94
Query: 124 AFRLCDEMMKKG-----LVMNSVI----------YNTVIHWLYVEGDMEGVSLLISSMV- 167
A+ EM+K+G ++SV+ Y ++H + V+ MEG + ++M+
Sbjct: 95 AWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMN 154
Query: 168 -----------------DNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSKILENNLIEDA 210
D ++ D T++ L G G+ K + ++L N
Sbjct: 155 MYATCSVTMEAACLIFRDIKVKND-VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP 213
Query: 211 FSHNILINYLCRSNNLSGAKQLLASMYVRGLVPDIVTFGSLIDGHCKEGNVENAVQVYEK 270
+ I + ++++ KQ+ AS+ RG ++ S++D +C+ G + A + +
Sbjct: 214 YCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHE 273
Query: 271 MMKSGEKPNLVLYNSVINGLCKEEXXXXXXXXXXXXXXMNLFDVITYNTLINGYCNSGKI 330
M E +L+ +N++I+ L + + + + T+ +L+ N +
Sbjct: 274 M----EDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAAL 329
Query: 331 DEAFAFSFAMKNAGIAANHATYNTLINFLCKLGHIQQAKELMKVMILQGFVPDYITYTIL 390
+ + G N N LI+ K G+I ++ + ++ + + +++T +
Sbjct: 330 NCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR---RNLVSWTSM 386
Query: 391 ITSFSKKCSPEEVIKLHDYMVLKGVIPHKQTYKAVVSPLLQEGV 434
+ + E ++L D MV G+ P + + AV+S G+
Sbjct: 387 MIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGL 430
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 119/276 (43%), Gaps = 28/276 (10%)
Query: 24 LKHGIWPNVVTFNMIIDVACKMGAMDLALKVVSKMEVMSVYSIRPDSITYNCLIGGFCKM 83
+K G N+ N I+D+ C+ G + A +ME D IT+N LI +
Sbjct: 240 IKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-------DKDLITWNTLISELERS 292
Query: 84 GK---LTMAEKLKNEMMEKDIVPNVRTYATLIDGYSRARSLEEAFRLCDEMMKKGLVMNS 140
L M ++ +++ VPN T+ +L+ + +L +L + ++G N
Sbjct: 293 DSSEALLMFQRFESQ----GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNV 348
Query: 141 VIYNTVIHWLYVEGDMEGVSLLISSMVDNRIPPDKFTYSILTKGLCRNGNVNEAFKFHSK 200
+ N +I G++ + +VD R + +++ + G +G EA + K
Sbjct: 349 ELANALIDMYAKCGNIPDSQRVFGEIVDRR---NLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 201 ILENNLIEDAFSHNILINYLCRSNNL--SGAK--QLLASMYVRGLVPDIVTFGSLIDGHC 256
++ + + D +++ CR L G K ++ S Y G+ PD + ++D
Sbjct: 406 MVSSGIRPDRIVFMAVLS-ACRHAGLVEKGLKYFNVMESEY--GINPDRDIYNCVVDLLG 462
Query: 257 KEGNVENAVQVYEKMMKSGEKPNLVLYNSVINGLCK 292
+ G + A ++ E+M KP+ + +++ G CK
Sbjct: 463 RAGKIGEAYELVERM---PFKPDESTWGAIL-GACK 494