Jatropha Genome Database

JcCA0254131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0254131.10 + phase: 0 /pseudo/partial
         (136 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G04955.1 | Symbols: ATALN | ATALN (Arabidopsis allantoinase);...   105   6e-24

>AT4G04955.1 | Symbols: ATALN | ATALN (Arabidopsis allantoinase);
           allantoinase/ hydrolase | chr4:2522301-2525259 REVERSE
          Length = 506

 Score =  105 bits (263), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 46/65 (70%), Positives = 56/65 (86%)

Query: 71  DIVIWEPSTVFDLNNDLPIYFKHPSISAYMGTKLSGKVLATFVRGNLVYKEGKHASAACG 130
           D+V+WEP   FD++ D PI+FKHPSISAY+G +LSGKV++TFVRGNLV+ EGKHAS ACG
Sbjct: 440 DLVVWEPEAEFDVDEDHPIHFKHPSISAYLGRRLSGKVVSTFVRGNLVFGEGKHASDACG 499

Query: 131 SLILA 135
           SL LA
Sbjct: 500 SLQLA 504