Jatropha Genome Database
- JcCA0247261.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0247261.10 + phase: 0 /pseudo/partial
(642 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G53540.1 | Symbols: | unknown protein | chr3:19846805-198506... 72 1e-12
AT2G20240.1 | Symbols: | unknown protein | chr2:8727778-8730086... 70 6e-12
AT1G63670.3 | Symbols: | unknown protein | chr1:23607527-236100... 64 4e-10
AT1G63670.2 | Symbols: | unknown protein | chr1:23607527-236100... 64 4e-10
AT1G63670.1 | Symbols: | unknown protein | chr1:23607527-236100... 64 4e-10
AT4G28760.2 | Symbols: | unknown protein | chr4:14208640-142118... 61 3e-09
AT4G28760.1 | Symbols: | unknown protein | chr4:14208640-142118... 61 3e-09
AT4G00440.2 | Symbols: | unknown protein | chr4:195176-198225 F... 52 1e-06
AT4G00440.3 | Symbols: | unknown protein | chr4:195176-198221 F... 52 1e-06
AT4G00440.1 | Symbols: | unknown protein | chr4:195176-198119 F... 52 1e-06
>AT3G53540.1 | Symbols: | unknown protein | chr3:19846805-19850670
REVERSE
Length = 924
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
Query: 126 KSIDSVVSAEVQVHTNENCMHHERPNEINLQVNMNEATEAFINQKLIDGKHLIADGASHQ 185
K + V+ A++ +N N H R N N+ +A AFI QK ++ K L D
Sbjct: 135 KDVFEVLDAKM-AESNRNLYHQGRVN-----ANLTQAEMAFIRQKFMEAKRLSTDDKLRH 188
Query: 186 SKNFLDALKILNSNKDLFIKLLQDPNSLLVKHIEDLRDSQTK 227
SK F DAL+ L+SNKDL +K LQ P+SL KH+ DL+ + K
Sbjct: 189 SKEFNDALEALDSNKDLLLKFLQHPDSLFTKHLHDLQSTPHK 230
>AT2G20240.1 | Symbols: | unknown protein | chr2:8727778-8730086
REVERSE
Length = 713
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 86/155 (55%), Gaps = 11/155 (7%)
Query: 131 VVSAEVQVHTNENCMHHERPNEINLQVNMNEATEAFINQKLIDGKHLIADGASHQSKNFL 190
V S E H E+ ++ + ++ + +M++ + +K ++ KHL+ D H+S
Sbjct: 69 VGSKEAGKHHREDETWDQKASNLSSKASMSDKQMDLVRRKFMEAKHLVTDDRLHRSSELQ 128
Query: 191 DALKILNSNKDLFIKLLQDPNSLLVKHIEDLR------DSQTKKLQNKSFARGGLSECQT 244
+AL++L+SNKDLF+K LQ+ NSL +H+ D + D++ + S A G+ +C
Sbjct: 129 EALQVLSSNKDLFVKFLQESNSLFPQHLSDFQPVPPHPDAKRITVLRPSKAV-GVQKCLA 187
Query: 245 RNTRK-CNLLMETGDFQPLE--KIVVFRPS-SKSL 275
+++K +L ETG ++ +IVV +PS KSL
Sbjct: 188 EDSKKPASLNQETGWIDAVQPTRIVVLKPSPGKSL 222
>AT1G63670.3 | Symbols: | unknown protein | chr1:23607527-23610003
REVERSE
Length = 689
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 151 NEINLQVNMNEATEAFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDP 210
+EINLQ +NEA E FI K + +SK F++AL IL+SNK+LFI LLQDP
Sbjct: 172 SEINLQACVNEAAETFICSK-------AEEKGKDRSKQFMEALDILSSNKELFITLLQDP 224
Query: 211 NSLLVKHIEDLRDSQTKKLQNKS 233
+S K DL S+ K+ ++KS
Sbjct: 225 HSFSAKKSLDLEGSKVKEPRDKS 247
>AT1G63670.2 | Symbols: | unknown protein | chr1:23607527-23610003
REVERSE
Length = 689
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 151 NEINLQVNMNEATEAFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDP 210
+EINLQ +NEA E FI K + +SK F++AL IL+SNK+LFI LLQDP
Sbjct: 172 SEINLQACVNEAAETFICSK-------AEEKGKDRSKQFMEALDILSSNKELFITLLQDP 224
Query: 211 NSLLVKHIEDLRDSQTKKLQNKS 233
+S K DL S+ K+ ++KS
Sbjct: 225 HSFSAKKSLDLEGSKVKEPRDKS 247
>AT1G63670.1 | Symbols: | unknown protein | chr1:23607527-23610003
REVERSE
Length = 689
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 151 NEINLQVNMNEATEAFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDP 210
+EINLQ +NEA E FI K + +SK F++AL IL+SNK+LFI LLQDP
Sbjct: 172 SEINLQACVNEAAETFICSK-------AEEKGKDRSKQFMEALDILSSNKELFITLLQDP 224
Query: 211 NSLLVKHIEDLRDSQTKKLQNKS 233
+S K DL S+ K+ ++KS
Sbjct: 225 HSFSAKKSLDLEGSKVKEPRDKS 247
>AT4G28760.2 | Symbols: | unknown protein | chr4:14208640-14211811
FORWARD
Length = 924
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 33/156 (21%)
Query: 165 AFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDPNSLLVKHIEDL--- 221
A + QK + K L+ D + HQSK F DAL++L+SNKDLF++ LQ+ NS +++ D
Sbjct: 201 ALVRQKFSEAKRLVTDDSLHQSKEFQDALEVLSSNKDLFVQFLQESNSFSQQNLSDFHHV 260
Query: 222 ----------------------------RDSQTKKLQNKSFARGGLSECQTRNTRKCNLL 253
R+ Q KKL + S G + + N
Sbjct: 261 PPHSEAKRITVLRPSKAGETEKYVVQGRRNKQVKKLASSSQETGWGNRDLGYPSPYVNRG 320
Query: 254 METGDFQPLEKIVVFRPS-SKSLQNHADRTSNDSPQ 288
E QP +IVV +PS KSL A +S SP+
Sbjct: 321 TEEHTVQPT-RIVVLKPSLGKSLDIKAVSSSQSSPR 355
>AT4G28760.1 | Symbols: | unknown protein | chr4:14208640-14211811
FORWARD
Length = 924
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 33/156 (21%)
Query: 165 AFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDPNSLLVKHIEDL--- 221
A + QK + K L+ D + HQSK F DAL++L+SNKDLF++ LQ+ NS +++ D
Sbjct: 201 ALVRQKFSEAKRLVTDDSLHQSKEFQDALEVLSSNKDLFVQFLQESNSFSQQNLSDFHHV 260
Query: 222 ----------------------------RDSQTKKLQNKSFARGGLSECQTRNTRKCNLL 253
R+ Q KKL + S G + + N
Sbjct: 261 PPHSEAKRITVLRPSKAGETEKYVVQGRRNKQVKKLASSSQETGWGNRDLGYPSPYVNRG 320
Query: 254 METGDFQPLEKIVVFRPS-SKSLQNHADRTSNDSPQ 288
E QP +IVV +PS KSL A +S SP+
Sbjct: 321 TEEHTVQPT-RIVVLKPSLGKSLDIKAVSSSQSSPR 355
>AT4G00440.2 | Symbols: | unknown protein | chr4:195176-198225
FORWARD
Length = 835
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 45/296 (15%)
Query: 45 VKKITGEDVSIEQEIKKKITTAKVENVQSDSELVDDRSRNHRKAPKSQRSRRLPIYGCYD 104
VKK+ E++SI++EIKK+ A+ + SDSEL R +N R+ K+++ C +
Sbjct: 85 VKKLIAEELSIDKEIKKQRENAEAGQL-SDSELEGRRRKNQRRKNKTRKK------SCDN 137
Query: 105 VSTVDHGEIPHQNLAGSD---------RSSKSID-SVVSAEVQVHTNENCMHHERPNEIN 154
S H NL S+ RS++S+D + E + H + N+ +
Sbjct: 138 FS--------HMNLVDSEEPLVQRRNRRSARSVDIDNMIEEFYSEIHRRSTSHAK-NDED 188
Query: 155 LQVNMNEATEAFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDPNSLL 214
+ + E + I+QKL+ G + SK+ ++ +IL S+++LF+KLLQDP L+
Sbjct: 189 YKEKLRELVKFLISQKLLHGNRPRGNSEILTSKDLMEVFQILGSDEELFLKLLQDPEILV 248
Query: 215 V--KHIEDLR--DSQTKKLQNKSFARGGLSECQTRNTRKCNLLMETGDFQPLEKIVVFRP 270
K E L +S+ L +K ++ + +C E D +I + +P
Sbjct: 249 PREKGAESLSLVESEQSSLADKKWS--SFFRRKDEPQEEC----EASD-----RIFILKP 297
Query: 271 SSKSLQN-HADRTSNDSPQIHYSLRSVHQSVKPIRFPFKQMKRTLMHAIGVSRKEQ 325
S S + + SP H + + ++KR L HAI +KEQ
Sbjct: 298 RSASFSSPDIGNSRGSSPDSHLMGNKLQNERNSSHYFLSEIKRKLKHAI---KKEQ 350
>AT4G00440.3 | Symbols: | unknown protein | chr4:195176-198221
FORWARD
Length = 832
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 45/296 (15%)
Query: 45 VKKITGEDVSIEQEIKKKITTAKVENVQSDSELVDDRSRNHRKAPKSQRSRRLPIYGCYD 104
VKK+ E++SI++EIKK+ A+ + SDSEL R +N R+ K+++ C +
Sbjct: 85 VKKLIAEELSIDKEIKKQRENAEAGQL-SDSELEGRRRKNQRRKNKTRKK------SCDN 137
Query: 105 VSTVDHGEIPHQNLAGSD---------RSSKSID-SVVSAEVQVHTNENCMHHERPNEIN 154
S H NL S+ RS++S+D + E + H + N+ +
Sbjct: 138 FS--------HMNLVDSEEPLVQRRNRRSARSVDIDNMIEEFYSEIHRRSTSHAK-NDED 188
Query: 155 LQVNMNEATEAFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDPNSLL 214
+ + E + I+QKL+ G + SK+ ++ +IL S+++LF+KLLQDP L+
Sbjct: 189 YKEKLRELVKFLISQKLLHGNRPRGNSEILTSKDLMEVFQILGSDEELFLKLLQDPEILV 248
Query: 215 V--KHIEDLR--DSQTKKLQNKSFARGGLSECQTRNTRKCNLLMETGDFQPLEKIVVFRP 270
K E L +S+ L +K ++ + +C E D +I + +P
Sbjct: 249 PREKGAESLSLVESEQSSLADKKWS--SFFRRKDEPQEEC----EASD-----RIFILKP 297
Query: 271 SSKSLQN-HADRTSNDSPQIHYSLRSVHQSVKPIRFPFKQMKRTLMHAIGVSRKEQ 325
S S + + SP H + + ++KR L HAI +KEQ
Sbjct: 298 RSASFSSPDIGNSRGSSPDSHLMGNKLQNERNSSHYFLSEIKRKLKHAI---KKEQ 350
>AT4G00440.1 | Symbols: | unknown protein | chr4:195176-198119
FORWARD
Length = 831
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 45/296 (15%)
Query: 45 VKKITGEDVSIEQEIKKKITTAKVENVQSDSELVDDRSRNHRKAPKSQRSRRLPIYGCYD 104
VKK+ E++SI++EIKK+ A+ + SDSEL R +N R+ K+++ C +
Sbjct: 85 VKKLIAEELSIDKEIKKQRENAEAGQL-SDSELEGRRRKNQRRKNKTRKK------SCDN 137
Query: 105 VSTVDHGEIPHQNLAGSD---------RSSKSID-SVVSAEVQVHTNENCMHHERPNEIN 154
S H NL S+ RS++S+D + E + H + N+ +
Sbjct: 138 FS--------HMNLVDSEEPLVQRRNRRSARSVDIDNMIEEFYSEIHRRSTSHAK-NDED 188
Query: 155 LQVNMNEATEAFINQKLIDGKHLIADGASHQSKNFLDALKILNSNKDLFIKLLQDPNSLL 214
+ + E + I+QKL+ G + SK+ ++ +IL S+++LF+KLLQDP L+
Sbjct: 189 YKEKLRELVKFLISQKLLHGNRPRGNSEILTSKDLMEVFQILGSDEELFLKLLQDPEILV 248
Query: 215 V--KHIEDLR--DSQTKKLQNKSFARGGLSECQTRNTRKCNLLMETGDFQPLEKIVVFRP 270
K E L +S+ L +K ++ + +C E D +I + +P
Sbjct: 249 PREKGAESLSLVESEQSSLADKKWS--SFFRRKDEPQEEC----EASD-----RIFILKP 297
Query: 271 SSKSLQN-HADRTSNDSPQIHYSLRSVHQSVKPIRFPFKQMKRTLMHAIGVSRKEQ 325
S S + + SP H + + ++KR L HAI +KEQ
Sbjct: 298 RSASFSSPDIGNSRGSSPDSHLMGNKLQNERNSSHYFLSEIKRKLKHAI---KKEQ 350