Jatropha Genome Database
- JcCA0242371.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0242371.10 - phase: 0 /pseudo/partial
(147 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-L... 247 2e-66
AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | R... 244 2e-65
AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5 | ARAC6... 243 3e-65
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC... 243 3e-65
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC... 243 3e-65
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | ROP2 (RHO-R... 243 4e-65
AT5G45970.1 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2 (ARAB... 241 1e-64
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3 (ARAB... 241 1e-64
AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11 | ARAC10; GTP bi... 228 9e-61
AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | ROP10 (RH... 226 3e-60
AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 ... 224 1e-59
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding ... 221 1e-58
AT1G16920.1 | Symbols: RAB11, ATRABA1B | ATRABA1B (ARABIDOPSIS R... 82 1e-16
AT3G54840.2 | Symbols: ARA6, RABF1 | ARA6; GTP binding / GTPase ... 82 1e-16
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | ARA6; GTP... 82 1e-16
AT3G53610.3 | Symbols: ATRAB8 | ATRAB8; GTP binding | chr3:19876... 81 2e-16
AT3G53610.2 | Symbols: ATRAB8 | ATRAB8; GTP binding | chr3:19876... 81 2e-16
AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a | ATRAB8; GTP b... 81 2e-16
AT3G46060.3 | Symbols: ARA3 | ATRAB8A; GTP binding | chr3:169179... 81 2e-16
AT3G46060.2 | Symbols: ARA3 | ATRAB8A; GTP binding | chr3:169179... 81 2e-16
AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A | ATRAB8A;... 81 2e-16
AT5G59840.1 | Symbols: | Ras-related GTP-binding family protein... 81 2e-16
AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A | ... 81 2e-16
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RABA4D (RAB GTPASE HOM... 80 4e-16
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A | ATRAB1A; GTP binding ... 79 1e-15
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | ATFP8; GTP bindin... 79 1e-15
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | ATRAB1C; GTP b... 79 1e-15
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | ARA-2; ... 78 2e-15
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C | ATGB2 (GTP-BIN... 77 3e-15
AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, A... 77 4e-15
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A... 77 4e-15
AT1G43890.3 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18 (ARABID... 77 5e-15
AT1G43890.2 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18 (ARABID... 77 5e-15
AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 77 5e-15
AT1G18200.1 | Symbols: AtRABA6b | AtRABA6b (Arabidopsis Rab GTPa... 77 5e-15
AT1G73640.1 | Symbols: AtRABA6a | AtRABA6a (Arabidopsis Rab GTPa... 76 9e-15
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A | ... 76 9e-15
AT2G33870.1 | Symbols: ArRABA1h | ArRABA1h (Arabidopsis Rab GTPa... 75 1e-14
AT5G47960.1 | Symbols: SMG1, ATRABA4C | ATRABA4C; GTP binding | ... 75 1e-14
AT5G45750.1 | Symbols: AtRABA1c | AtRABA1c (Arabidopsis Rab GTPa... 75 1e-14
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B | ATRABA2B (... 75 2e-14
AT4G18430.1 | Symbols: AtRABA1e | AtRABA1e (Arabidopsis Rab GTPa... 75 2e-14
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D | ATRABA2D (HOARABIDO... 74 3e-14
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D | ATRABA1D (A... 74 3e-14
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3 | ATRABA3 (ARABIDOPSIS ... 74 3e-14
AT3G15060.1 | Symbols: AtRABA1g | AtRABA1g (Arabidopsis Rab GTPa... 74 4e-14
AT1G28550.1 | Symbols: AtRABA1i | AtRABA1i (Arabidopsis Rab GTPa... 73 6e-14
AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6 | AT... 72 1e-13
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C | ... 72 1e-13
AT2G31680.1 | Symbols: AtRABA5d | AtRABA5d (Arabidopsis Rab GTPa... 72 1e-13
AT5G60860.1 | Symbols: AtRABA1f | AtRABA1f (Arabidopsis Rab GTPa... 72 2e-13
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ... 72 2e-13
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |... 72 2e-13
AT4G39890.1 | Symbols: AtRABH1c | AtRABH1c (Arabidopsis Rab GTPa... 71 2e-13
AT5G65270.1 | Symbols: AtRABA4a | AtRABA4a (Arabidopsis Rab GTPa... 71 2e-13
AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | RAB6A; G... 71 2e-13
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C... 71 3e-13
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RABA4... 70 5e-13
AT3G07410.1 | Symbols: AtRABA5b | AtRABA5b (Arabidopsis Rab GTPa... 70 5e-13
AT5G10260.1 | Symbols: AtRABH1e | AtRABH1e (Arabidopsis Rab GTPa... 70 6e-13
AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, R... 70 7e-13
AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RABG3B; G... 69 8e-13
AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D | A... 69 1e-12
AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E | ATRABE1E (ARABIDOPSIS... 69 1e-12
AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A | ATRABB1A (ARABIDOPSIS... 68 2e-12
AT5G64990.1 | Symbols: AtRABH1a | AtRABH1a (Arabidopsis Rab GTPa... 68 3e-12
AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |... 67 3e-12
AT2G21880.1 | Symbols: ATRAB7A, ATRABG2 | ATRAB7A; GTP binding |... 67 4e-12
AT1G52280.1 | Symbols: AtRABG3d | AtRABG3d (Arabidopsis Rab GTPa... 65 2e-11
AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB GT... 64 3e-11
AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB GT... 64 3e-11
AT5G55080.1 | Symbols: AtRAN4 | AtRAN4 (Ras-related nuclear prot... 64 3e-11
AT4G09720.1 | Symbols: ATRABG3A | Ras-related GTP-binding protei... 64 4e-11
AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D | ATRABG3C (ARABIDOPSIS... 64 4e-11
AT5G47520.1 | Symbols: AtRABA5a | AtRABA5a (Arabidopsis Rab GTPa... 61 2e-10
AT5G20020.1 | Symbols: RAN2 | RAN2; GTP binding / GTPase/ protei... 59 8e-10
AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAN-1; GTP binding ... 59 1e-09
AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN3 (RAN GTPASE 3); GTP b... 59 1e-09
AT4G09720.3 | Symbols: ATRABG3A | Ras-related GTP-binding protei... 58 2e-09
AT5G39620.1 | Symbols: AtRABG1 | AtRABG1 (Arabidopsis Rab GTPase... 57 3e-09
AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B | ATRABC2B (ARABIDOPSI... 56 6e-09
AT5G27540.2 | Symbols: MIRO1 | MIRO1 (Miro-related GTP-ase 1); G... 55 1e-08
AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO1 (Miro-related GTP-... 55 1e-08
AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C | ATGB2 (GTP-BIN... 54 3e-08
AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO2 (MIRO-RELATED GTP-AS... 54 4e-08
AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D | A... 54 5e-08
>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-LIKE
GTP BINDING PROTEIN 5); GTP binding / GTPase |
chr1:28475964-28477377 FORWARD
Length = 196
Score = 247 bits (630), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/139 (87%), Positives = 127/139 (91%), Gaps = 3/139 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL+HYAPGVP+ILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
Query: 121 ---GNVTVAIDHLHGIDIS 136
+ IDH + I+
Sbjct: 121 DLRDDKQFFIDHPGAVPIT 139
>AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | ROP1
(RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding /
GTPase activating protein binding / GTPase/ protein
binding | chr3:19043197-19044215 FORWARD
Length = 197
Score = 244 bits (622), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/139 (84%), Positives = 127/139 (91%), Gaps = 3/139 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1 MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPELKHYAPGVP++LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 ---GNVTVAIDHLHGIDIS 136
+ IDH + I+
Sbjct: 121 DLRDDKQFFIDHPGAVPIT 139
>AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5 | ARAC6
(ARABIDOPSIS RAC-LIKE 6); GTP binding |
chr4:17024051-17025514 REVERSE
Length = 197
Score = 243 bits (620), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/139 (84%), Positives = 127/139 (91%), Gaps = 3/139 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPELKHYAPGVP++LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 ---GNVTVAIDHLHGIDIS 136
+ IDH + I+
Sbjct: 121 DLRDDKQFFIDHPGAVPIT 139
>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1;
GTP binding | chr2:7740313-7741942 FORWARD
Length = 197
Score = 243 bits (620), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/139 (84%), Positives = 127/139 (91%), Gaps = 3/139 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPELKHYAPGVP++LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 ---GNVTVAIDHLHGIDIS 136
+ IDH + I+
Sbjct: 121 DLRDDKQFFIDHPGAVPIT 139
>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1;
GTP binding | chr2:7740313-7741942 FORWARD
Length = 197
Score = 243 bits (620), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/139 (84%), Positives = 127/139 (91%), Gaps = 3/139 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPELKHYAPGVP++LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 ---GNVTVAIDHLHGIDIS 136
+ IDH + I+
Sbjct: 121 DLRDDKQFFIDHPGAVPIT 139
>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | ROP2
(RHO-RELATED PROTEIN FROM PLANTS 2); GTP binding |
chr1:6967223-6968603 FORWARD
Length = 195
Score = 243 bits (620), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/137 (86%), Positives = 125/137 (91%), Gaps = 3/137 (2%)
Query: 3 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTA 62
ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWDTA
Sbjct: 2 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTA 61
Query: 63 GQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL-- 120
GQEDYNRLRPLSYRGADVFILAFSLISKASYEN+AKKWIPEL+HYAPGVP+ILVGTKL
Sbjct: 62 GQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDL 121
Query: 121 -GNVTVAIDHLHGIDIS 136
+ IDH + I+
Sbjct: 122 RDDKQFFIDHPGAVPIT 138
>AT5G45970.1 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2
(ARABIDOPSIS RAC-LIKE 2); GTP binding |
chr5:18643761-18645758 FORWARD
Length = 201
Score = 241 bits (615), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/120 (92%), Positives = 118/120 (98%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+ KKW+PELKHYAPG+P++LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKL 120
>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3
(ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase |
chr4:16673176-16674540 FORWARD
Length = 198
Score = 241 bits (614), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 110/120 (91%), Positives = 120/120 (100%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENV+KKW+PEL+HYAPGVP+ILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
>AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11 | ARAC10; GTP
binding | chr5:25237236-25238939 FORWARD
Length = 215
Score = 228 bits (581), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 104/119 (87%), Positives = 116/119 (97%)
Query: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
SAS+FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVVV+G+TVNLGLWDT
Sbjct: 4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
AGQEDYNRLRPLSYRGADVF+L+FSL+S+ASYENV KKWIPEL+H+APGVP++LVGTKL
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLSFSLVSRASYENVFKKWIPELQHFAPGVPLVLVGTKL 122
>AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | ROP10
(RHO-RELATED PROTEIN FROM PLANTS 10); GTP binding /
GTPase | chr3:17731561-17733241 FORWARD
Length = 208
Score = 226 bits (577), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 104/119 (87%), Positives = 114/119 (95%)
Query: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
SAS+FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFS NVVV+G TVNLGLWDT
Sbjct: 4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
AGQEDYNRLRPLSYRGADVF+LAFSLIS+ASYENV KKWIPEL+H+APGVP++LVGTK+
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLAFSLISRASYENVFKKWIPELQHFAPGVPIVLVGTKM 122
>AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9
(RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding |
chr4:14278289-14279705 FORWARD
Length = 209
Score = 224 bits (572), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 102/120 (85%), Positives = 112/120 (93%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSAS+FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANV VDG VNLGLWD
Sbjct: 1 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
TAGQEDY+RLRPLSYRGAD+F+LAFSLISKASYENV KKW+PEL+ +AP VP++LVGTKL
Sbjct: 61 TAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKL 120
>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding |
chr2:18429276-18430636 FORWARD
Length = 209
Score = 221 bits (563), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 100/114 (87%), Positives = 111/114 (97%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQE 65
FIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNF+ANV+VDG TVNLGLWDTAGQE
Sbjct: 18 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAGQE 77
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTK 119
DYNR+RPLSYRGADVFILAFSLIS+ S+EN+AKKW+PEL+HYAP VP++LVGTK
Sbjct: 78 DYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPELRHYAPTVPIVLVGTK 131
>AT1G16920.1 | Symbols: RAB11, ATRABA1B | ATRABA1B (ARABIDOPSIS RAB
GTPASE HOMOLOG A1B); GTP binding | chr1:5787489-5789147
REVERSE
Length = 216
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VDG V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E Y + YRGA +L + + +A++ENV +W+ ELK H P + V+LVG K
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFENV-DRWLKELKNHTDPNIVVMLVGNK 127
>AT3G54840.2 | Symbols: ARA6, RABF1 | ARA6; GTP binding / GTPase |
chr3:20318597-20320737 FORWARD
Length = 193
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAGQ 64
+K V +GD VGK+C+++ + F TV +F + + D +TV +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E Y+ L PL YRGA V ++ + + S S++ A+ W+ EL KH +P + + LVG K
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKK-AQYWVKELQKHGSPDIVMALVGNK 148
>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | ARA6; GTP
binding / GTPase | chr3:20318597-20320782 FORWARD
Length = 202
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAGQ 64
+K V +GD VGK+C+++ + F TV +F + + D +TV +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E Y+ L PL YRGA V ++ + + S S++ A+ W+ EL KH +P + + LVG K
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKK-AQYWVKELQKHGSPDIVMALVGNK 148
>AT3G53610.3 | Symbols: ATRAB8 | ATRAB8; GTP binding |
chr3:19876531-19878264 REVERSE
Length = 216
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNK 129
>AT3G53610.2 | Symbols: ATRAB8 | ATRAB8; GTP binding |
chr3:19876531-19878264 REVERSE
Length = 216
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNK 129
>AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a | ATRAB8; GTP
binding | chr3:19876531-19878264 REVERSE
Length = 216
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNK 129
>AT3G46060.3 | Symbols: ARA3 | ATRAB8A; GTP binding |
chr3:16917908-16919740 FORWARD
Length = 216
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNK 129
>AT3G46060.2 | Symbols: ARA3 | ATRAB8A; GTP binding |
chr3:16917908-16919740 FORWARD
Length = 216
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNK 129
>AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A | ATRAB8A;
GTP binding | chr3:16917908-16919740 FORWARD
Length = 216
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNK 129
>AT5G59840.1 | Symbols: | Ras-related GTP-binding family protein |
chr5:24107450-24109049 REVERSE
Length = 216
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNK 129
>AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A |
ARA-5 (ARABIDOPSIS RAS 5); GTP binding |
chr1:400350-401788 REVERSE
Length = 203
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ ++ +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAP-GVPVILVGTK 119
E + + YRGA I+ + + + S+ NV K+W+ E+ YA V +LVG K
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNK 122
>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RABA4D (RAB GTPASE
HOMOLOG A4D); GTP binding | chr3:3879495-3880437 REVERSE
Length = 222
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD AVGKT +L + N F D T+ F + +V+D TV +WDTAGQE
Sbjct: 17 KVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQER 76
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
Y + YRGA +L + + + S++++A KW+ EL+ H + ++L+G K
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA-KWLEELRGHADKNIVIMLIGNK 129
>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A | ATRAB1A; GTP binding |
chr5:19167029-19168718 FORWARD
Length = 202
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVILVGTK 119
E + + YRGA I+ + + S+ NV K+W+ E+ YA V +LVG K
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNK 122
>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | ATFP8; GTP binding /
GTP-dependent protein binding / myosin XI tail binding |
chr3:3709490-3711397 REVERSE
Length = 205
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD +VGK+C+L+ + + + Y+ T+ +F + DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVILVGTK 119
E + + YRGA I+ + S+ NV K+W+ E+ YA V +L+G K
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDCTEMESFNNV-KQWLSEIDRYANESVCKLLIGNK 122
>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | ATRAB1C; GTP
binding | chr4:9773721-9775424 REVERSE
Length = 202
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVILVGTK 119
E + + YRGA I+ + + S+ NV K+W+ E+ YA V +LVG K
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNK 122
>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | ARA-2; GTP
binding | chr1:1951089-1952686 REVERSE
Length = 216
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ V+G V +WDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E Y + YRGA +L + + A++EN A +W+ EL+ H P + V+L+G K
Sbjct: 73 ERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNK 127
>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C | ATGB2
(GTP-BINDING 2); GTP binding | chr4:16987118-16988839
REVERSE
Length = 211
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS K + +GD VGK+C+L+ +T F + T+ F A +V VDG + L +W
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVILVGT 118
DTAGQE + + YRGA +L + + + ++ ++A W+ + + +A P + ++L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANPNMSIMLIGN 119
Query: 119 K 119
K
Sbjct: 120 K 120
>AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B,
ATRAB-F2B, RAB-F2B | ARA7; GTP binding |
chr4:10687441-10689449 REVERSE
Length = 200
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVILVGTK 119
Y+ L P+ YRGA I+ F + ++AS+E AKKW+ EL+ P + + L G K
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNK 124
>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
ATRAB-F2A, RAB-F2A | RHA1 (RAB HOMOLOG 1); GTP binding |
chr5:18244495-18246060 FORWARD
Length = 200
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVILVGTK 119
Y+ L P+ YRGA I+ F + ++AS+E AKKW+ EL+ P + + L G K
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDITNQASFER-AKKWVQELQAQGNPNMVMALAGNK 124
>AT1G43890.3 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18
(ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding |
chr1:16646934-16648395 FORWARD
Length = 212
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQ 64
K + +GD VGK+ +L+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVI--LVGTKLGN 122
E + L YRGA I+ + + + ++ N++ W E+ Y+ I LVG K+
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 VTV-AIDHLHGIDIS 136
+ A+ GID +
Sbjct: 132 ESERAVSKKEGIDFA 146
>AT1G43890.2 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18
(ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding |
chr1:16646934-16648395 FORWARD
Length = 212
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQ 64
K + +GD VGK+ +L+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVI--LVGTKLGN 122
E + L YRGA I+ + + + ++ N++ W E+ Y+ I LVG K+
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 VTV-AIDHLHGIDIS 136
+ A+ GID +
Sbjct: 132 ESERAVSKKEGIDFA 146
>AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1 |
ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP
binding | chr1:16646934-16648395 FORWARD
Length = 212
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQ 64
K + +GD VGK+ +L+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVI--LVGTKLGN 122
E + L YRGA I+ + + + ++ N++ W E+ Y+ I LVG K+
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 VTV-AIDHLHGIDIS 136
+ A+ GID +
Sbjct: 132 ESERAVSKKEGIDFA 146
>AT1G18200.1 | Symbols: AtRABA6b | AtRABA6b (Arabidopsis Rab GTPase
homolog A6b); GTP binding / GTPase/ protein binding |
chr1:6265416-6266659 REVERSE
Length = 229
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L ++ + F D PT+ +F+ NV V T+ +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHY-APGVPVILVGTK 119
E + + YRGA +L + + + +++N+ +KW+ EL+ + +P V+LVG K
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRITFKNI-EKWLSELRGFSSPETVVVLVGNK 127
>AT1G73640.1 | Symbols: AtRABA6a | AtRABA6a (Arabidopsis Rab GTPase
homolog A6a); GTP binding | chr1:27687033-27687987
FORWARD
Length = 233
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L ++ + F D PT+ F+ NV V + +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVILVGTK 119
E + + YRGA +L + + + +++N+ KKW+ EL+ +A P V+LVG K
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRTTFDNI-KKWLFELRDFANPETVVVLVGNK 127
>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A |
ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding |
chr1:3118350-3119571 REVERSE
Length = 217
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKLGNVT 124
E Y + YRGA +L + + ++ENV+ +W+ EL+ +A VI++ +GN T
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVS-RWLKELRDHADSNIVIML---IGNKT 127
Query: 125 VAIDHLHGI 133
+ HL +
Sbjct: 128 -DLKHLRAV 135
>AT2G33870.1 | Symbols: ArRABA1h | ArRABA1h (Arabidopsis Rab GTPase
homolog A1h); GTP binding | chr2:14337366-14338251
REVERSE
Length = 218
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V GD VGK+ +L +T N F D T+ F+ ++ VD V +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTKLGNV 123
E Y + YRGA +L + + ++ENV ++W+ EL+ H ++LVG K
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANTVIMLVGNK---- 127
Query: 124 TVAIDHLHGIDISEL 138
++HL I E+
Sbjct: 128 -ADLNHLRAISTEEV 141
>AT5G47960.1 | Symbols: SMG1, ATRABA4C | ATRABA4C; GTP binding |
chr5:19421533-19422473 REVERSE
Length = 223
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD AVGK+ +L ++ N F + T+ F + +D T+ +WDTAGQE
Sbjct: 17 KVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTAGQER 76
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
Y + YRGA +L + + + S+++VA +W+ EL+ H + ++L+G K
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDITKRQSFDHVA-RWLEELRGHADKNIVIMLIGNK 129
>AT5G45750.1 | Symbols: AtRABA1c | AtRABA1c (Arabidopsis Rab GTPase
homolog A1c); GTP binding | chr5:18559318-18560639
FORWARD
Length = 216
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD + +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E Y + YRGA +L + + +++ENV + W+ EL+ H P + V+LVG K
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ETWLKELRNHTDPNIVVMLVGNK 127
>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B | ATRABA2B
(ARABIDOPSIS RAB GTPASE HOMOLOG A2B); GTP binding /
GTPase/ protein binding | chr1:2276270-2277154 FORWARD
Length = 214
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKLGNVT 124
E Y + YRGA +L + + + ++ENV +W+ EL+ +A VI++ GN +
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENVL-RWLRELRDHADSNIVIMMA---GNKS 127
Query: 125 VAIDHLHGI 133
++HL +
Sbjct: 128 -DLNHLRSV 135
>AT4G18430.1 | Symbols: AtRABA1e | AtRABA1e (Arabidopsis Rab GTPase
homolog A1e); GTP binding | chr4:10183903-10185223
REVERSE
Length = 217
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ V VD + LWDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTKLGNV 123
E Y + YRGA +L + + ++ENV ++W+ EL+ H V ++LVG K
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDITRHITFENV-ERWLKELRDHTDANVVIMLVGNK---- 127
Query: 124 TVAIDHLHGIDISE 137
+ HL + E
Sbjct: 128 -ADLRHLRAVPTEE 140
>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D | ATRABA2D
(HOARABIDOPSIS RAB GTPASE HOMOLOG A2D); GTP binding |
chr5:23876858-23878244 FORWARD
Length = 217
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGKT +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKLGNVT 124
E Y + YRGA +L + + + +++NV +W+ EL+ +A VI++ GN
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHADSNIVIMMA---GN-K 126
Query: 125 VAIDHLHGI 133
++HL +
Sbjct: 127 ADLNHLRSV 135
>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D | ATRABA1D
(ARABIDOPSIS RAB GTPASE HOMOLOG A1D); GTP binding |
chr4:10320156-10321339 REVERSE
Length = 214
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+ + +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E Y + YRGA +L + + +++ENV ++W+ EL+ H P + V+LVG K
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLRELRDHTDPNIVVMLVGNK 127
>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3 | ATRABA3 (ARABIDOPSIS RAB
GTPASE HOMOLOG A3); GTP binding | chr1:86715-88145
REVERSE
Length = 237
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD AVGKT +L +T N F D T+ F + + G V +WDTAGQE
Sbjct: 30 KVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQER 89
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVI-LVGTK 119
Y + YRGA ++ + + + S+++VA +W+ EL+ +A VI LVG K
Sbjct: 90 YRAVTSAYYRGALGAMVVYDITKRLSFDHVA-RWVEELRAHADDSAVIMLVGNK 142
>AT3G15060.1 | Symbols: AtRABA1g | AtRABA1g (Arabidopsis Rab GTPase
homolog A1g); GTP binding | chr3:5069239-5070025 FORWARD
Length = 217
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQE
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQER 74
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
Y + YRGA +L + + ++ENV ++W+ EL+ H + ++LVG K
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTEANIVIMLVGNK 127
>AT1G28550.1 | Symbols: AtRABA1i | AtRABA1i (Arabidopsis Rab GTPase
homolog A1i); GTP binding | chr1:10036966-10037698
REVERSE
Length = 218
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V GD VGK+ +L +T N F D T+ F+ ++ D V +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTKLGNV 123
E Y + YRGA +L + + ++ENV ++W+ EL+ H + ++LVG K
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNK---- 127
Query: 124 TVAIDHLHGIDISE 137
+ HL I E
Sbjct: 128 -ADLRHLRAISTEE 140
>AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6 |
ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D); GTP
binding | chr2:9466568-9467688 FORWARD
Length = 207
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPG-VPVILVGTK 119
+ L P R + V ++ + + ++ S+ N + KWI E+++ G V ++LVG K
Sbjct: 71 FRSLIPSYIRDSSVAVVVYDVANRLSFLNTS-KWIEEVRNERAGDVIIVLVGNK 123
>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C |
ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C); GTP
binding | chr3:17246699-17248362 REVERSE
Length = 217
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ V+G T+ +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKLGNVT 124
E Y + YRGA +L + + + +++NV +W+ EL+ +A VI++ GN +
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHADSNIVIMMA---GNKS 127
Query: 125 VAIDHLHGI 133
++HL +
Sbjct: 128 -DLNHLRSV 135
>AT2G31680.1 | Symbols: AtRABA5d | AtRABA5d (Arabidopsis Rab GTPase
homolog A5d); GTP binding | chr2:13473781-13474957
REVERSE
Length = 219
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L Y N F T+ F + N+ ++G V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E + + YRGA ++ + + ++++E+V +W+ ELK H V +LVG K
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDISRRSTFESVG-RWLDELKTHSDTTVARMLVGNK 126
>AT5G60860.1 | Symbols: AtRABA1f | AtRABA1f (Arabidopsis Rab GTPase
homolog A1f); GTP binding | chr5:24484750-24485565
FORWARD
Length = 217
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E Y + YRGA +L + + ++ENV ++W+ EL+ H + ++ VG K
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMFVGNK 127
>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E |
RABA5E (RAB GTPASE HOMOLOG A5E); GTP binding |
chr1:1748314-1749350 FORWARD
Length = 261
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L Y N F + T+ F + ++ ++G V +WDTAGQ
Sbjct: 55 LFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQ 114
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E + + YRGA ++ + + + ++E+V +W+ ELK H V +LVG K
Sbjct: 115 ERFRAVTSAYYRGAVGALVVYDITRRTTFESVG-RWLDELKIHSDTTVARMLVGNK 169
>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
ARA4; GTP binding / GTPase/ protein binding |
chr2:17929899-17930904 REVERSE
Length = 214
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L Y N F + T+ F + ++++DG V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E + + YRGA ++ + + +++ENV +W+ EL H V +L+G K
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDITRSSTFENVG-RWLDELNTHSDTTVAKMLIGNK 126
>AT4G39890.1 | Symbols: AtRABH1c | AtRABH1c (Arabidopsis Rab GTPase
homolog H1c); GTP binding / protein binding |
chr4:18506112-18507459 FORWARD
Length = 214
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 6/116 (5%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y PT+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPG---VPVILVGTK 119
+ L P R + V I+ + + ++ ++ N + KWI ++ H G V ++LVG K
Sbjct: 71 FRSLIPSYIRDSSVAIVVYDVSNRQTFLNTS-KWIEDV-HRERGQSNVIIVLVGNK 124
>AT5G65270.1 | Symbols: AtRABA4a | AtRABA4a (Arabidopsis Rab GTPase
homolog A4a); GTP binding | chr5:26083437-26084550
FORWARD
Length = 226
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQED 66
K V +GD AVGK+ +L Y + F D T+ F +V+D +V +WDTAGQE
Sbjct: 19 KVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQER 78
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
Y + YRGA +L + + + +++++ +W+ EL+ H + +IL+G K
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDITRRQTFDHIP-RWLEELRAHADKNIVIILIGNK 131
>AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | RAB6A; GTP
binding / protein binding | chr2:18411778-18413883
REVERSE
Length = 208
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
+ L P R + V ++ + + S+ S+ N KWI E++ V V+LVG K
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQSFLNTT-KWIDEVRTERGSDVIVVLVGNK 123
>AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C,
ATRAB-B1B, RAB-B1B | RABB1C (ARABIDOPSIS RAB GTPASE
HOMOLOG B1C); GTP binding / GTPase |
chr4:9644908-9646220 REVERSE
Length = 211
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+C+L+ +T F + T+ F A ++ +D + L +W
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA-PGVPVILVGT 118
DTAGQE + + YRGA +L + + + ++ ++A W+ + + +A + ++L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANANMTIMLIGN 119
Query: 119 K 119
K
Sbjct: 120 K 120
>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RABA4B
(RAB GTPASE HOMOLOG A4B); GTP binding |
chr4:18542722-18543779 FORWARD
Length = 224
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD AVGK+ +L + + F D T+ F + ++ ++ +WDTAGQE
Sbjct: 19 KVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQER 78
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
Y + YRGA +L + + + ++E++ +W+ EL+ H + +IL+G K
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDMTKRETFEHIP-RWLEELRAHADKNIVIILIGNK 131
>AT3G07410.1 | Symbols: AtRABA5b | AtRABA5b (Arabidopsis Rab GTPase
homolog A5b); GTP binding | chr3:2372485-2373482 REVERSE
Length = 217
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L ++ + F T+ T+ F +V ++G V +WDTAGQ
Sbjct: 12 LFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E + + YRGA ++ + + ++E+V K+W+ EL H V +LVG K
Sbjct: 72 ERFRAVTSAYYRGAFGALIVYDITRGDTFESV-KRWLQELNTHCDTAVAQMLVGNK 126
>AT5G10260.1 | Symbols: AtRABH1e | AtRABH1e (Arabidopsis Rab GTPase
homolog H1e); GTP binding | chr5:3219991-3221301 FORWARD
Length = 207
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
+ L P R + V ++ + + ++ S+ N + KWI +++ V ++LVG K
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTS-KWIEDVRTERGSDVIIVLVGNK 123
>AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A,
RABC2A | RABC2A (RAB GTPASE HOMOLOG C2A); GTP binding /
GTP-dependent protein binding / myosin XI tail binding |
chr5:885741-887061 REVERSE
Length = 210
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQED 66
K + +GD VGK+ +L+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLVSFISSSVE-DLAPTIGVDFKIKQLTVGGKRLKLTIWDTAGQER 73
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVI--LVGTKL 120
+ L YRGA IL + + + ++ N+ W E++ Y+ + LVG K+
Sbjct: 74 FRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKV 129
>AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RABG3B; GTP
binding | chr1:8049247-8050494 FORWARD
Length = 203
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
MS R +K + +GD VGKT ++ Y +N F Y T+ +F + + +D V L
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LKHYAP----GVP 112
+WDTAGQE + L YRGAD +L + + S+E++ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESL-DNWHNEFLTRASPRDPMAFP 119
Query: 113 VILVGTKL 120
IL+G K+
Sbjct: 120 FILLGNKV 127
>AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D |
ATRAB8C; GTP binding | chr5:883679-885158 FORWARD
Length = 216
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +TF T ++ T+ +F V +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA +L + + ++S+ N+ + W+ + +H + V ILVG K
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDNVNKILVGNK 129
>AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E | ATRABE1E (ARABIDOPSIS
RAB GTPASE HOMOLOG E1E); GTP binding |
chr3:3034687-3036379 FORWARD
Length = 218
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +TF T ++ T+ +F V +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-KHYAPGVPVILVGTK 119
E + + YRGA +L + + ++S+ N+ + W+ + +H + V ILVG K
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDSVNKILVGNK 129
>AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A | ATRABB1A (ARABIDOPSIS
RAB GTPASE HOMOLOG B1A); GTP binding |
chr4:9641980-9643541 REVERSE
Length = 205
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+C+L+ +T F + T+ F A + +D + L +W
Sbjct: 1 MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGT 118
DTAGQE + + YRG +L + + + ++ ++A W+ E + H + + +L+G
Sbjct: 61 DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLA-SWLEEARQHASENMTTMLIGN 119
Query: 119 K 119
K
Sbjct: 120 K 120
>AT5G64990.1 | Symbols: AtRABH1a | AtRABH1a (Arabidopsis Rab GTPase
homolog H1a); GTP binding | chr5:25963562-25964792
REVERSE
Length = 206
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD VGKT ++ + F T Y T+ D S + T L LWDTAGQE
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQER 68
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
+ L P R + V ++ + + SK S+ N + KWI E++ V ++LVG K
Sbjct: 69 FKSLVPSYIRDSSVAVIVYDVASKQSFINTS-KWIEEVRAERGSYVIIVLVGNK 121
>AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |
ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F); GTP
binding | chr3:6484266-6486005 FORWARD
Length = 206
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LKHYAP----GVPVILVGTK 119
E + L YRGAD +L + + S S+EN+ W E L +P P +L+G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFENL-NNWREEFLIQASPSDPENFPFVLIGNK 126
Query: 120 L 120
+
Sbjct: 127 V 127
>AT2G21880.1 | Symbols: ATRAB7A, ATRABG2 | ATRAB7A; GTP binding |
chr2:9324899-9326170 REVERSE
Length = 212
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F Y T+ +F + + +D +V L +WDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQ 68
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LKHYAP----GVPVILVGTK 119
E + L YRGAD +L + + + S+E + W E LK P P +L+G K
Sbjct: 69 ERFQSLGAAFYRGADCCVLVYDVNNLKSFETL-NNWHTEFLKQANPMEPETFPFVLIGNK 127
>AT1G52280.1 | Symbols: AtRABG3d | AtRABG3d (Arabidopsis Rab GTPase
homolog G3d); GTP binding | chr1:19468150-19469449
REVERSE
Length = 206
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
MS+ R +K + +GD VGKT ++ + + F Y T+ +F + V +D L
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LKHYAPGVPVILV 116
+WDTAGQE + L YRGAD +L + + S++N+ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNL-NNWREEFLIQASPSDPENFP 119
Query: 117 GTKLGNVT 124
LGN T
Sbjct: 120 FVVLGNKT 127
>AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB
GTPASE HOMOLOG G3E); GTP binding |
chr1:18234842-18236968 FORWARD
Length = 206
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LKHYAP----GVPVILVGTK 119
E + L YRGAD +L + + S S+E++ W E L +P P +++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSAKSFEDL-NNWREEFLIQASPSDPENFPFVVIGNK 126
Query: 120 L 120
+
Sbjct: 127 I 127
>AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB
GTPASE HOMOLOG G3E); GTP binding |
chr1:18234842-18236968 FORWARD
Length = 206
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LKHYAP----GVPVILVGTK 119
E + L YRGAD +L + + S S+E++ W E L +P P +++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSAKSFEDL-NNWREEFLIQASPSDPENFPFVVIGNK 126
Query: 120 L 120
+
Sbjct: 127 I 127
>AT5G55080.1 | Symbols: AtRAN4 | AtRAN4 (Ras-related nuclear protein
4); GTP binding / GTPase/ protein binding |
chr5:22351576-22353058 REVERSE
Length = 222
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K + VGDG GKT L + + F + PT+ D + + + + WDTAGQE
Sbjct: 14 FKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKLGNVTV 125
Y+ L+ Y I+ F + ++ +Y N+ +W +L+ +P++L G K+ +
Sbjct: 74 KYSGLKDAYYIHGQCAIIMFDVTARHTYMNI-DRWYRDLRRVCKNIPIVLCGNKVDVPSR 132
Query: 126 AIDHLH 131
I H
Sbjct: 133 QIKPKH 138
>AT4G09720.1 | Symbols: ATRABG3A | Ras-related GTP-binding protein,
putative | chr4:6133101-6134959 FORWARD
Length = 206
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F Y T+ +F + + + V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LKHYAPG----VPVILVGTK 119
E + L YRGAD L + + S++N+ + W E LK +P P I++G K
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQASPSDPKTFPFIVLGNK 126
Query: 120 L 120
+
Sbjct: 127 I 127
>AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D | ATRABG3C (ARABIDOPSIS
RAB GTPASE HOMOLOG G3C); GTP binding |
chr3:5459270-5460556 FORWARD
Length = 206
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
M++ R +K + +GD VGKT ++ + + F Y T+ +F + V +D L
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LKHYAPGVPVILV 116
+WDTAGQE + L YRGAD +L + S+EN+ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENL-NNWREEFLIQASPSDPENFP 119
Query: 117 GTKLGNVT 124
LGN T
Sbjct: 120 FVVLGNKT 127
>AT5G47520.1 | Symbols: AtRABA5a | AtRABA5a (Arabidopsis Rab GTPase
homolog A5a); GTP binding | chr5:19277596-19278366
REVERSE
Length = 221
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L + + F + T+ F + ++G + +WDTAGQ
Sbjct: 14 LFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQ 73
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELK-HYAPGVPVILVGTK 119
E + + YRGA +L + + + ++ ++ +W+ EL H V ILVG K
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFHSIG-RWLNELHTHSDMNVVTILVGNK 128
>AT5G20020.1 | Symbols: RAN2 | RAN2; GTP binding / GTPase/ protein
binding | chr5:6762817-6764381 FORWARD
Length = 221
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
+ LR Y I+ F + ++ +Y+NV W +L +P++L G K+
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKV 127
>AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAN-1; GTP binding /
GTPase/ protein binding | chr5:6760364-6761747 FORWARD
Length = 221
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
+ LR Y I+ F + ++ +Y+NV W +L +P++L G K+
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKV 127
>AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN3 (RAN GTPASE 3); GTP
binding / GTPase/ protein binding |
chr5:22392285-22393957 FORWARD
Length = 221
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
+ LR Y I+ F + ++ +Y+NV W +L +P++L G K+
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKV 127
>AT4G09720.3 | Symbols: ATRABG3A | Ras-related GTP-binding protein,
putative | chr4:6133101-6134959 FORWARD
Length = 217
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F Y T+ +F + + + V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYA 108
E + L YRGAD L + + S++N+ + W E A
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQA 110
>AT5G39620.1 | Symbols: AtRABG1 | AtRABG1 (Arabidopsis Rab GTPase
homolog G1); GTP binding | chr5:15864166-15865782
REVERSE
Length = 204
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVF-DNFSANVVVDGSTVNLGLWDTAGQE 65
+K + +GD VGKT +L Y F + T++ D + + + V L +WDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LKHYAPGVPVILVGTKLGNVT 124
+ L YR D +L + + + ++E++ W E +K P P +GN T
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESI-DNWHDEFIKQANPETPTKFPFVLMGNKT 124
>AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B | ATRABC2B (ARABIDOPSIS
RAB GTPASE HOMOLOG C2B); ATP binding / GTP binding /
transcription factor binding | chr3:3036864-3038121
REVERSE
Length = 205
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 14 FKILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQE 72
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVI--LVGTKL 120
+ L +RG+ IL + + + ++ N+A W E++ Y+ I LVG K+
Sbjct: 73 KFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKV 129
>AT5G27540.2 | Symbols: MIRO1 | MIRO1 (Miro-related GTP-ase 1); GTP
binding | chr5:9722816-9727112 FORWARD
Length = 648
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 3 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTA 62
+ + ++ V VGD GK+ ++++ +++FP + VP V ++ + + + + DT+
Sbjct: 14 SPKSVRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTS 72
Query: 63 GQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
+ + + + AD +L ++ + E +++ W+PEL+ +P+I+ G KL
Sbjct: 73 SRPEDRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKL 130
>AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO1 (Miro-related GTP-ase
1); GTP binding | chr5:9722816-9727112 FORWARD
Length = 648
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 3 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTA 62
+ + ++ V VGD GK+ ++++ +++FP + VP V ++ + + + + DT+
Sbjct: 14 SPKSVRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTS 72
Query: 63 GQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
+ + + + AD +L ++ + E +++ W+PEL+ +P+I+ G KL
Sbjct: 73 SRPEDRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKL 130
>AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C | ATGB2
(GTP-BINDING 2); GTP binding | chr4:16987118-16988587
REVERSE
Length = 165
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELKH 106
V VDG + L +WDTAGQE + + YRGA +L + + + ++ ++A W+ + +
Sbjct: 2 VTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQ 60
Query: 107 YA-PGVPVILVGTK 119
+A P + ++L+G K
Sbjct: 61 HANPNMSIMLIGNK 74
>AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO2 (MIRO-RELATED GTP-ASE
2); GTPase/ calcium ion binding | chr3:23329200-23332692
REVERSE
Length = 643
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQED 66
++ GD GK+ ++ + S TFP D VP V + + + + DT D
Sbjct: 15 LRVAVAGDKGTGKSSLISAVASETFP-DNVPRVLPPITLPADAFPDYIPITIVDTPSSID 73
Query: 67 YNRLRPLS-YRGADVFILAFSLISKASYENVAKKWIPELKHYAPGVPVILVGTKL 120
NR++ + +R ADV +L ++ ++ + ++ W+PEL+ PVI+VG KL
Sbjct: 74 -NRIKLIEEFRKADVVLLTYACDQPSTLDRLSSYWLPELRRLEIKAPVIVVGCKL 127
>AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D |
ATRAB8C; GTP binding | chr5:883713-885158 FORWARD
Length = 206
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-K 105
V +DG + L +WDTAGQE + + YRGA +L + + ++S+ N+ + W+ + +
Sbjct: 47 VELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQ 105
Query: 106 HYAPGVPVILVGTK 119
H + V ILVG K
Sbjct: 106 HASDNVNKILVGNK 119