Jatropha Genome Database

JcCA0239311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0239311.10 + phase: 0 /TE
         (1286 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   305   2e-82
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   139   2e-32
AT3G29785.1 | Symbols:  | unknown protein | chr3:11612357-116126...   108   2e-23
ATMG00710.1 | Symbols: ORF120 | hypothetical protein | chrM:2075...    85   3e-16
ATMG00300.1 | Symbols: ORF145A | hypothetical protein | chrM:896...    78   3e-14
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    59   1e-08

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  305 bits (780), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 269/492 (54%), Gaps = 32/492 (6%)

Query: 772  YMNYLL-LTDGGEPECFEEACQTADASKWELAMKDEIKSLISNQTWELAELPVGKKALHN 830
            Y ++L+ +    EP  + EA    +   W  AM DEI ++ +  TWE+  LP  KK +  
Sbjct: 73   YHSFLVCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGC 129

Query: 831  KWVYRVKEEHDGS-------------KQKEGVDYTEIFAPVVKLNTIRSVLSIVASEGLY 877
            KWVY++K   DG+              Q+EG+D+ E F+PV KL +++ +L+I A     
Sbjct: 130  KWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189

Query: 878  LEQLDVKTAFLHGDLDKEIYMYQPEGFSEKGKE----NMVCKLKKSLYGLKQAPRQWYRK 933
            L QLD+  AFL+GDLD+EIYM  P G++ +  +    N VC LKKS+YGLKQA RQW+ K
Sbjct: 190  LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLK 249

Query: 934  FDGFMHREGFQRCNADHCCYFKRFKTSYIILLLYVDDMLVAGPDINEIKNLKKQLSKEFD 993
            F   +   GF + ++DH  + K   T ++ +L+YVDD+++   +   +  LK QL   F 
Sbjct: 250  FSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFK 309

Query: 994  MKDLGLAKKILGMQITRDKQKQVLQLSQAEYINRVLQRFNMNEAKPVSTPLASHFRLSKD 1053
            ++DLG  K  LG++I R      + + Q +Y   +L    +   KP S P+      S  
Sbjct: 310  LRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 367

Query: 1054 QSPQTEEERKDMAKIPYASAIGSLMYAMVCTRPDIGHAVGVVSRYMSKPGKTHWEAVKWI 1113
                  + +       Y   IG LMY  + TR DI  AV  +S++   P   H +AV  I
Sbjct: 368  SGGDFVDAKA------YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKI 420

Query: 1114 LRYLRGTTEKCLYF-GKGELKVQGYVDADYGGDIDHRRSTTCYIFTVGTTAVCWMSQVQK 1172
            L Y++GT  + L++  + E+++Q + DA +    D RRST  Y   +GT+ + W S+ Q+
Sbjct: 421  LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 480

Query: 1173 IVALSTTEAEYVAVTXASKEMIWLQGLLTELGF-MRKKNILYSDSQSAIHLAKNSTFHSR 1231
            +V+ S+ EAEY A++ A+ EM+WL     EL   + K  +L+ D+ +AIH+A N+ FH R
Sbjct: 481  VVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHER 540

Query: 1232 TKHIGLRYHFIR 1243
            TKHI    H +R
Sbjct: 541  TKHIESDCHSVR 552


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score =  139 bits (349), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/233 (36%), Positives = 125/233 (53%), Gaps = 11/233 (4%)

Query: 964  LLLYVDDMLVAGPDINEIKNLKKQLSKEFDMKDLGLAKKILGMQITRDKQKQVLQLSQAE 1023
            LLLYVDD+L+ G     +  L  QLS  F MKDLG     LG+QI        L LSQ +
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQTK 60

Query: 1024 YINRVLQRFNMNEAKPVSTPLASHFRLSKDQSPQTEEERKDMAKIPYASAIGSLMYAMVC 1083
            Y  ++L    M + KP+STPL    +L+   S     +  D     + S +G+L Y +  
Sbjct: 61   YAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSD-----FRSIVGALQY-LTL 112

Query: 1084 TRPDIGHAVGVVSRYMSKPGKTHWEAVKWILRYLRGTTEKCLYFGK-GELKVQGYVDADY 1142
            TRPDI +AV +V + M +P    ++ +K +LRY++GT    LY  K  +L VQ + D+D+
Sbjct: 113  TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 172

Query: 1143 GGDIDHRRSTTCYIFTVGTTAVCWMSQVQKIVALSTTEAEYVAVTXASKEMIW 1195
             G    RRSTT +   +G   + W ++ Q  V+ S+TE EY A+   + E+ W
Sbjct: 173  AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>AT3G29785.1 | Symbols:  | unknown protein | chr3:11612357-11612686
           REVERSE
          Length = 109

 Score =  108 bits (270), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/90 (56%), Positives = 66/90 (73%), Gaps = 1/90 (1%)

Query: 11  EKFDGADFGFWKMQIEDYLYQKGLFQPLSGTKPEAMKEEDWNLLDRQALGVIRLTLSRNV 70
           +K DG  + F +M+IEDYLY K L QPL G K E M ++DWN+L RQ L VIRLT+S+N+
Sbjct: 7   DKVDGTSYSFCRMKIEDYLYGKKLHQPL-GKKVETMSQDDWNILYRQVLDVIRLTISKNI 65

Query: 71  AFNIAKEKTTAGLMAALSNMYEKPSAANKV 100
           A N+AKEK+  GLM  LS++Y+KPS  N V
Sbjct: 66  AHNVAKEKSPDGLMKVLSDIYKKPSTNNTV 95


>ATMG00710.1 | Symbols: ORF120 | hypothetical protein |
           chrM:207553-207915 REVERSE
          Length = 120

 Score = 85.1 bits (209), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 3/86 (3%)

Query: 585 MNRTLTERARSLRVQSGLPKXFWAEAVNTAAYLINRGPSVPLEHKIPEEVWSGKEVKLSH 644
           MNRT+ E+ RS+  + GLPK F A+A NTA ++IN+ PS  +   +P+EVW       S+
Sbjct: 1   MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60

Query: 645 LRVFGCVAYVHISDHGRNKLDPKSKK 670
           LR FGCVAY+H  D G  KL P++KK
Sbjct: 61  LRRFGCVAYIH-CDEG--KLKPRAKK 83


>ATMG00300.1 | Symbols: ORF145A | hypothetical protein |
           chrM:89617-90054 REVERSE
          Length = 145

 Score = 78.2 bits (191), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 6/114 (5%)

Query: 382 KITKDAMMVARGSKSGTLYSTGGA----SYFIAVAANSETPNIWHQRLGHMSMKGMKILH 437
           K+ K    + +G++  +LY   G+       +A  A  ET  +WH RL HMS +GM++L 
Sbjct: 30  KVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDET-RLWHSRLAHMSQRGMELLV 88

Query: 438 SQGKLPGLQSIEIDMCEDCIFGKQKRVSFQTNRRTPKKEKLELVHSDVWGPTTV 491
            +G L   +   +  CEDCI+GK  RV+F T + T  K  L+ VHSD+WG  +V
Sbjct: 89  KKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHT-TKNPLDYVHSDLWGAPSV 141


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 16/117 (13%)

Query: 767 KPNRKYMNYLLLTDGGEPECFEEACQTADASKWELAMKDEIKSLISNQTWELAELPVGKK 826
           K N KY   +  T   EP+    A +      W  AM++E+ +L  N+TW L   PV + 
Sbjct: 11  KLNPKYSLTITTTIKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQN 67

Query: 827 ALHNKWVYRVKEEHDGS-------------KQKEGVDYTEIFAPVVKLNTIRSVLSI 870
            L  KWV++ K   DG+              Q+EG+ + E ++PVV+  TIR++L++
Sbjct: 68  ILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124