Jatropha Genome Database

JcCA0237741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0237741.10 - phase: 0 /pseudo/partial
         (457 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G43670.1 | Symbols:  | transport protein, putative | chr5:175...   467   e-132
AT3G23660.1 | Symbols:  | transport protein, putative | chr3:851...   284   8e-77
AT1G05520.1 | Symbols:  | transport protein, putative | chr1:163...   284   1e-76
AT4G14160.2 | Symbols:  | transport protein, putative | chr4:816...   271   9e-73
AT4G14160.1 | Symbols:  | transport protein, putative | chr4:816...   270   1e-72
AT4G14160.3 | Symbols:  | transport protein, putative | chr4:816...   250   1e-66
AT2G21630.1 | Symbols:  | transport protein, putative | chr2:925...   243   1e-64

>AT5G43670.1 | Symbols:  | transport protein, putative |
           chr5:17539025-17541733 REVERSE
          Length = 794

 Score =  467 bits (1201), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 213/302 (70%), Positives = 258/302 (85%), Gaps = 2/302 (0%)

Query: 1   GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
           G+IVDS L+N+IRTHRD+I G   Y+DKSC FY +L++RL D+S+VLD+FACSLDQVG A
Sbjct: 335 GIIVDSDLSNSIRTHRDIITGHVSYYDKSCGFYKKLAKRLCDSSVVLDVFACSLDQVGAA 394

Query: 61  ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICG 120
           EL+  VE SGGF++LGE FES+QF+KCLRHIF R  DG+L MYFD ++EV+TT+D++ICG
Sbjct: 395 ELRYAVEMSGGFLLLGETFESEQFKKCLRHIFIRDADGNLSMYFDVSLEVVTTKDMRICG 454

Query: 121 ALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQ--KAHPGSAFF 178
           ALGP VSL +KND+VS+ E G+GGTY WK  T+TNKTC++FFF V +EQ  K  PGSAFF
Sbjct: 455 ALGPVVSLRQKNDIVSETEIGEGGTYMWKTSTVTNKTCVSFFFHVSNEQNRKPQPGSAFF 514

Query: 179 IQFITRYRHGNMGIQKRVTTAARRWVGNKSAEITAGFDQEAAASVMARLAIHRAETCYAR 238
           IQFITRYR+GN  ++KRVTT ARRWV  KS EI++ FDQE AASVMARLAI+RAE C+AR
Sbjct: 515 IQFITRYRYGNGAMRKRVTTVARRWVAGKSPEISSSFDQETAASVMARLAINRAEECHAR 574

Query: 239 DVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSSPDET 298
           DVI WLD+ LIRFAS+FGDYIQEDPS+FRL+ NFSLYPQFM+YLRRSQF+DVFN+SPDET
Sbjct: 575 DVITWLDNGLIRFASRFGDYIQEDPSSFRLTPNFSLYPQFMFYLRRSQFLDVFNNSPDET 634

Query: 299 AF 300
            F
Sbjct: 635 GF 636


>AT3G23660.1 | Symbols:  | transport protein, putative |
           chr3:8513666-8517729 REVERSE
          Length = 765

 Score =  284 bits (727), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 141/305 (46%), Positives = 199/305 (65%), Gaps = 6/305 (1%)

Query: 1   GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
           G IV   L++ +R+H+DL    APY+ K+  FY+ ++++L     VLDLFA +LDQVGVA
Sbjct: 302 GTIVSKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQLVTQGHVLDLFASALDQVGVA 361

Query: 61  ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICG 120
           E+K  VER+GG ++L E F    F+   + +F  G D +L + F+ T+E+  ++D+KI G
Sbjct: 362 EMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDG-DQALGLCFNGTLEICCSQDIKIQG 420

Query: 121 ALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQKAHPGSA---F 177
           A+GPC SL KK   V+D   G+G T AW+L  L   TC+  FF++       PG+A   F
Sbjct: 421 AIGPCSSLEKKGASVADTVIGEGNTSAWRLCGLDKTTCLTIFFDISSSGSNTPGAANPQF 480

Query: 178 FIQFITRYRHGNMGIQKRVTTAARRWVGN--KSAEITAGFDQEAAASVMARLAIHRAETC 235
           ++QF+T Y++       RVTT  R+W+ +   S E+  GFDQE AA VMARLA  + E+ 
Sbjct: 481 YLQFLTSYQNPEGQTLLRVTTVCRQWIDSAVSSEELVQGFDQETAAVVMARLASLKMESE 540

Query: 236 YARDVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSSP 295
              D  RWLD NLIR  SKFGDY ++DP++F L+  FSL+PQF++ LRRSQF+ VFN+SP
Sbjct: 541 EGFDATRWLDRNLIRLCSKFGDYRKDDPASFTLNPYFSLFPQFIFNLRRSQFVQVFNNSP 600

Query: 296 DETAF 300
           DETA+
Sbjct: 601 DETAY 605


>AT1G05520.1 | Symbols:  | transport protein, putative |
           chr1:1631126-1635703 REVERSE
          Length = 783

 Score =  284 bits (726), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 142/307 (46%), Positives = 201/307 (65%), Gaps = 7/307 (2%)

Query: 1   GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
           G IV   L+  +R+H+DL    AP++ K+  FY+ L+ +L +   VLDLFA +LDQVGVA
Sbjct: 319 GTIVSKDLSEPLRSHKDLDKDAAPFYKKAEKFYDALANQLVNQGHVLDLFASALDQVGVA 378

Query: 61  ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICG 120
           E+KA VER+GG ++L E F    F+   + +F  GE+ SL + F+ T+E+  ++D+KI G
Sbjct: 379 EMKAAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEE-SLGLCFNGTLEICCSKDIKIQG 437

Query: 121 ALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGD-EQKAHPGSA--- 176
            +GPC SL KK   V+D   G+G T  WK+  L  +TC+  FF++   +Q + PG     
Sbjct: 438 IIGPCASLQKKGPSVADTVIGEGNTTQWKMCGLDKRTCLTVFFDLSSSDQSSAPGGVNNQ 497

Query: 177 FFIQFITRYRHGNMGIQKRVTTAARRWV--GNKSAEITAGFDQEAAASVMARLAIHRAET 234
            ++QF+T Y++      +RVTT  R+WV  G  + E+  GFDQE AA V+ARLA  + ET
Sbjct: 498 LYLQFMTSYQNSKGKTLQRVTTVTRQWVDTGLSTEELVQGFDQETAAVVVARLASLKMET 557

Query: 235 CYARDVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSS 294
               D  RWLD NLIR  SKFGDY ++DP++F L+ NFSL+PQF + LRRSQF+ VFN+S
Sbjct: 558 EEGFDATRWLDRNLIRLCSKFGDYRKDDPASFTLNPNFSLFPQFTFNLRRSQFVQVFNNS 617

Query: 295 PDETAFS 301
           PDETA++
Sbjct: 618 PDETAYN 624


>AT4G14160.2 | Symbols:  | transport protein, putative |
           chr4:8167574-8173026 FORWARD
          Length = 772

 Score =  271 bits (692), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 136/305 (44%), Positives = 190/305 (62%), Gaps = 6/305 (1%)

Query: 1   GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
           G I+   L++ +R+H+DL    APY+ K+  FY+ ++++L     VLDLFA +LDQVGVA
Sbjct: 309 GTIISKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQLVAQGHVLDLFASALDQVGVA 368

Query: 61  ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICG 120
           E+K  VE +GG ++L E F    F+   + +F  GE  SL + F+ T+E+  ++D+KI G
Sbjct: 369 EMKVAVESTGGLVVLSESFGHSVFKDSFKRMFEDGEH-SLGLCFNGTLEINCSKDIKIQG 427

Query: 121 ALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQKAHPGS---AF 177
            +GPC SL KK   V+D   G+G T AWKL  L   TC+  FF++       PG+     
Sbjct: 428 VIGPCSSLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCLTVFFDLSSTGSTAPGALNQQL 487

Query: 178 FIQFITRYRHGNMGIQKRVTTAARRWVGN--KSAEITAGFDQEAAASVMARLAIHRAETC 235
           ++QFITRY++       RVTT  R+WV     +  +  GFDQE AA VMARL   + ET 
Sbjct: 488 YLQFITRYQNSEGKSLARVTTLTRQWVDTAVSTENLVQGFDQETAAVVMARLTSLKMETE 547

Query: 236 YARDVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSSP 295
              D  RWLD  LIR  SKFG+Y ++DP++F L    +L+PQFM+ LRRSQF+ VFN+SP
Sbjct: 548 EGFDATRWLDRTLIRLCSKFGEYRKDDPTSFTLKPYLTLFPQFMFNLRRSQFVQVFNNSP 607

Query: 296 DETAF 300
           DETA+
Sbjct: 608 DETAY 612


>AT4G14160.1 | Symbols:  | transport protein, putative |
           chr4:8167574-8173026 FORWARD
          Length = 773

 Score =  270 bits (690), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 136/306 (44%), Positives = 190/306 (62%), Gaps = 7/306 (2%)

Query: 1   GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
           G I+   L++ +R+H+DL    APY+ K+  FY+ ++++L     VLDLFA +LDQVGVA
Sbjct: 309 GTIISKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQLVAQGHVLDLFASALDQVGVA 368

Query: 61  ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICG 120
           E+K  VE +GG ++L E F    F+   + +F  GE  SL + F+ T+E+  ++D+KI G
Sbjct: 369 EMKVAVESTGGLVVLSESFGHSVFKDSFKRMFEDGEH-SLGLCFNGTLEINCSKDIKIQG 427

Query: 121 ALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQKAHPGS---AF 177
            +GPC SL KK   V+D   G+G T AWKL  L   TC+  FF++       PG+     
Sbjct: 428 VIGPCSSLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCLTVFFDLSSTGSTAPGALNQQL 487

Query: 178 FIQFITRYRHGNMGIQKRVTTAARRWVG---NKSAEITAGFDQEAAASVMARLAIHRAET 234
           ++QFITRY++       RVTT  R+WV    +    +  GFDQE AA VMARL   + ET
Sbjct: 488 YLQFITRYQNSEGKSLARVTTLTRQWVDTAVSTEVNLVQGFDQETAAVVMARLTSLKMET 547

Query: 235 CYARDVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSS 294
               D  RWLD  LIR  SKFG+Y ++DP++F L    +L+PQFM+ LRRSQF+ VFN+S
Sbjct: 548 EEGFDATRWLDRTLIRLCSKFGEYRKDDPTSFTLKPYLTLFPQFMFNLRRSQFVQVFNNS 607

Query: 295 PDETAF 300
           PDETA+
Sbjct: 608 PDETAY 613


>AT4G14160.3 | Symbols:  | transport protein, putative |
           chr4:8167574-8172266 FORWARD
          Length = 620

 Score =  250 bits (639), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 179/293 (61%), Gaps = 6/293 (2%)

Query: 1   GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
           G I+   L++ +R+H+DL    APY+ K+  FY+ ++++L     VLDLFA +LDQVGVA
Sbjct: 309 GTIISKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQLVAQGHVLDLFASALDQVGVA 368

Query: 61  ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICG 120
           E+K  VE +GG ++L E F    F+   + +F  GE  SL + F+ T+E+  ++D+KI G
Sbjct: 369 EMKVAVESTGGLVVLSESFGHSVFKDSFKRMFEDGEH-SLGLCFNGTLEINCSKDIKIQG 427

Query: 121 ALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQKAHPGS---AF 177
            +GPC SL KK   V+D   G+G T AWKL  L   TC+  FF++       PG+     
Sbjct: 428 VIGPCSSLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCLTVFFDLSSTGSTAPGALNQQL 487

Query: 178 FIQFITRYRHGNMGIQKRVTTAARRWVGN--KSAEITAGFDQEAAASVMARLAIHRAETC 235
           ++QFITRY++       RVTT  R+WV     +  +  GFDQE AA VMARL   + ET 
Sbjct: 488 YLQFITRYQNSEGKSLARVTTLTRQWVDTAVSTENLVQGFDQETAAVVMARLTSLKMETE 547

Query: 236 YARDVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFI 288
              D  RWLD  LIR  SKFG+Y ++DP++F L    +L+PQFM+ LRRSQF+
Sbjct: 548 EGFDATRWLDRTLIRLCSKFGEYRKDDPTSFTLKPYLTLFPQFMFNLRRSQFV 600


>AT2G21630.1 | Symbols:  | transport protein, putative |
           chr2:9250346-9253829 FORWARD
          Length = 761

 Score =  243 bits (621), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/307 (44%), Positives = 191/307 (62%), Gaps = 8/307 (2%)

Query: 1   GMIVDSSLTNAIRTHRDLINGRAPYHDKSCSFYNRLSQRLSDASIVLDLFACSLDQVGVA 60
           G IV   L++ IR+H+D+    A Y+ K+  FY  L+++L     VLD+FA S+DQVG+A
Sbjct: 301 GAIVSRELSDPIRSHKDIDKDSAMYYHKAVEFYEMLAKQLVHQGHVLDVFASSVDQVGIA 360

Query: 61  ELKAPVERSGGFMMLGELFESDQFRKCLRHIFSRGEDGSLKMYFDATIEVITTRDVKICG 120
           ELK  VE++GGF++L E F    FR  L+ +   GE+  L +      E+  ++D+K+ G
Sbjct: 361 ELKVAVEQTGGFVVLAESFGHSVFRDSLKRVCQSGEN-DLGLSSCGIFEINCSKDIKVQG 419

Query: 121 ALGPCVSLHKKNDLVSDRETGQGGTYAWKLGTLTNKTCIAFFFEVGDEQKAH-----PGS 175
            +GPC SL KK  L SD   GQG T AWK+  L N T I   FE+     A        +
Sbjct: 420 IIGPCASLEKKGPLCSDTAIGQGHTSAWKMCGLDNNTSICLVFEIAKIDTADVVLQSQSN 479

Query: 176 AFFIQFITRYRHGNMGIQKRVTTAARRWV-GNKS-AEITAGFDQEAAASVMARLAIHRAE 233
            F+ QF+T Y+H N   + RVTT +RRWV G +S  E++ GFDQEAAA VMARL   + E
Sbjct: 480 QFYFQFLTYYQHSNGQTRLRVTTLSRRWVMGTESLQELSNGFDQEAAAVVMARLISSKME 539

Query: 234 TCYARDVIRWLDDNLIRFASKFGDYIQEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNS 293
           T    +  RW+D  LI   + FGDY + +PS+F LS+  S++PQF+++LRRSQF+ VFN+
Sbjct: 540 TQPEFNPQRWVDKALINLCTWFGDYQKGNPSSFSLSSQLSIFPQFVFHLRRSQFVQVFNN 599

Query: 294 SPDETAF 300
           SPDETA+
Sbjct: 600 SPDETAY 606