Jatropha Genome Database
- JcCA0237721.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0237721.10 - phase: 1 /partial
(357 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07610.1 | Symbols: | F-box family protein | chr5:2406068-24... 201 6e-52
AT5G49610.1 | Symbols: | F-box family protein | chr5:20131448-2... 74 1e-13
AT5G18160.1 | Symbols: | F-box family protein | chr5:6002770-60... 59 4e-09
AT5G03970.2 | Symbols: | F-box family protein | chr5:1071721-10... 59 6e-09
AT5G03970.1 | Symbols: | F-box family protein | chr5:1071721-10... 59 6e-09
AT1G30790.1 | Symbols: | F-box family protein | chr1:10932713-1... 58 7e-09
AT1G19160.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 1e-08
AT3G08750.1 | Symbols: | F-box family protein | chr3:2656716-26... 57 2e-08
AT3G06240.1 | Symbols: | F-box family protein | chr3:1887336-18... 56 4e-08
AT3G52320.1 | Symbols: | F-box family protein | chr3:19403020-1... 55 5e-08
AT4G09190.1 | Symbols: | F-box family protein | chr4:5855176-58... 55 6e-08
AT3G17280.1 | Symbols: | F-box family protein | chr3:5903453-59... 55 9e-08
AT3G10240.1 | Symbols: | F-box protein-related | chr3:3166698-3... 54 2e-07
AT4G04690.1 | Symbols: | F-box family protein (FBX15) | chr4:23... 54 2e-07
AT5G62510.1 | Symbols: | F-box family protein | chr5:25095373-2... 53 4e-07
AT4G19940.1 | Symbols: | F-box family protein | chr4:10806195-1... 52 5e-07
AT3G17540.1 | Symbols: | F-box family protein | chr3:6002783-60... 52 6e-07
AT3G23880.1 | Symbols: | F-box family protein | chr3:8622061-86... 50 2e-06
AT3G23260.1 | Symbols: | F-box family protein | chr3:8313334-83... 50 3e-06
AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483... 50 3e-06
AT1G60370.1 | Symbols: | F-box family protein | chr1:22244963-2... 49 4e-06
AT2G16810.1 | Symbols: | F-box family protein (FBX8) | chr2:728... 49 5e-06
AT5G42430.1 | Symbols: | F-box family protein | chr5:16971312-1... 49 5e-06
>AT5G07610.1 | Symbols: | F-box family protein |
chr5:2406068-2407330 FORWARD
Length = 420
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 197/373 (52%), Gaps = 44/373 (11%)
Query: 11 LIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSPCAL--FVRKSFRLENEFD 68
LIQIL LPIK+L +FK VSK WLSLITNP+FS R+ N P + F S R E ++
Sbjct: 38 LIQILSFLPIKTLLRFKRVSKRWLSLITNPVFSNRVIKSNHPLPISGFFLHSPR-EIKYS 96
Query: 69 FIMIDD-----KYSIDAPFKTLEFIDDTIRIIQSCNGLLLC-----SSVQFYLPEAKYYV 118
F+ +DD + S P + D I I+QS NGLLLC SS F YYV
Sbjct: 97 FVSLDDDATNQRISSSLPLWFTDHQTDMI-IMQSTNGLLLCKCSCASSNHF---NTNYYV 152
Query: 119 YNPTTNQYAILPPLTGSADEICGLYLAFDPLKSPNYKVI----RLLQSEISEPD---FQI 171
YNPTT QY +L + G L LAFDP +SP+YKV R S S D + I
Sbjct: 153 YNPTTKQYTLLHQIAGH----IALSLAFDPSRSPHYKVFCLRGRSNNSFSSASDSELYHI 208
Query: 172 EIYSSKINHEWKVSNAGFTLESLDIGTHDGVFCNGAIHWYT-DFGPSFYFDVDKEQVKEM 230
E+YSS W+ T S I VF NGA++WY FD++ +++K +
Sbjct: 209 EVYSSN-EGLWRRVVPVPTSPSTFIEFSYSVFWNGAVNWYGFSSRDCLSFDINTQEIKIL 267
Query: 231 AMPATPEEWYR----RRVLYFRECRGHLYLVEIYNAPSTKFNVWEMEKDYSGWIVKYRID 286
+P E R +++ E +G+LY +E+ N S+ V+EME + S W VKY +D
Sbjct: 268 PLPDHEHEDEPLPDPRILMFLDESQGNLYYIEVNNQSSSNLRVYEMESNSSSWSVKYNVD 327
Query: 287 LDGIVRAFPGMIRS--YLDPSALNYYVFQIMYIVKGXXXXXXXXXGSYLVLHIPTKIIRY 344
L+ + AFP MIR+ Y D Y F ++ VK SY++LHIP + ++Y
Sbjct: 328 LEPLAAAFPEMIRTEYYTD---RRIYAFSVIGFVK-----EETDAASYILLHIPNQAVKY 379
Query: 345 NLKDKSFKKLCDF 357
N DK+FKKLCDF
Sbjct: 380 NFIDKTFKKLCDF 392
>AT5G49610.1 | Symbols: | F-box family protein |
chr5:20131448-20132527 REVERSE
Length = 359
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 135/302 (44%), Gaps = 28/302 (9%)
Query: 11 LIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSPCALFVRKSFRLENEFDFI 70
++QIL LP+KSLF+FKSV K W L ++ F+ + L V + + + I
Sbjct: 14 ILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLSVKEQLLVAE---VSDSSSLI 70
Query: 71 MIDDKYSIDAPFKTLEFIDDTIRIIQSCNGLLLCSSVQFYLPE-AKYYVYNPTTNQYAIL 129
+D+ + +L+F+ D +RI S NGLL CSS+ PE YYV NP+T +Y L
Sbjct: 71 CVDNLRGVSE--LSLDFVRDRVRIRVSSNGLLCCSSI----PEKGVYYVCNPSTREYRKL 124
Query: 130 P-----PLTG--SADEICGLYLAFDPLKSP-NYKVIRLLQSEISEPD--FQIEIYSSKIN 179
P P+T E + LA D K+ N + +S PD F ++ S+ N
Sbjct: 125 PKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFGQRPDGSFICLVFDSESN 184
Query: 180 HEWKVSNAGFTLESLDIGTHDGVFCNGAIHW-YTDFGPSFYFDVDKEQVKEMAMPATPE- 237
K + + + VF NG +HW + DV+ + +++++P
Sbjct: 185 KWRKFVSVLEECSFTHMSKNQVVFVNGMLHWLMSGLCYILALDVEHDVWRKISLPDEIRI 244
Query: 238 -EWYRRRVLYFRECRGHLYLVEIYNAPSTKFNVWEM-EKDYSGWIVKYRIDLDGIVRAFP 295
RV Y E G L ++++ + +W+M E + W V I L I P
Sbjct: 245 GNGGGNRV-YLLESDGFLSVIQLSD---VWMKIWKMSEYETETWSVVDSISLRCIKGLVP 300
Query: 296 GM 297
G+
Sbjct: 301 GI 302
>AT5G18160.1 | Symbols: | F-box family protein |
chr5:6002770-6003909 FORWARD
Length = 379
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 48/278 (17%)
Query: 12 IQILLCLPIKSLFKFKSVSKHWLSLITNPLF-SRRLFPFNSPCALFV-RKSFRL------ 63
I+IL LP KS+ + +SVSK W S+ T P F R + PC L + RK +L
Sbjct: 40 IEILSRLPAKSIVRSRSVSKLWSSITTTPEFIKHRSKKTSPPCVLLIFRKHDKLIVFSSP 99
Query: 64 ENEFDFIMIDDKYSIDAPFKTLEFIDDTIRIIQSCNGLLLCSSVQFYLPEAKYYVYNPTT 123
+++ + + D Y I+ P IR + S +GL+ + + + NPT
Sbjct: 100 QHQNTYSHVQD-YHIEIPKNGF------IRRLDSVHGLICLEGSK------QLVICNPTL 146
Query: 124 NQYAILPPLTGSADEI-CGLYLAFDPLKSPNYKVIRLLQSEISEPDFQIEIYSSKINHEW 182
++ LP G+ DE G +L ++P++ YK + +++ + ++ + +I W
Sbjct: 147 KRFFPLPEPQGTGDEYNVGGFLGYEPIEG-KYKALCIVRG------WNTQVLTLEIQESW 199
Query: 183 KVSNAGFTLESLDIGTHDGVFC-NGAIHWYT---DFGPS---FYFDVDKEQVKEMAMPAT 235
+V+ G+T T D C NG I++ D P F FD+ E+ + P
Sbjct: 200 RVTKPGYT----HWPTKDTGRCINGVIYYKAIIFDRVPRHVIFGFDLRYEEFTHIEFPMR 255
Query: 236 PEEWYRRRVLYFRECRGHLYLVEIYNAPSTKFNVWEME 273
Y R ++ E G L L+ ++ S+ +W +E
Sbjct: 256 N---YDRFLMVSYE--GRLALI---SSTSSVVEIWSLE 285
>AT5G03970.2 | Symbols: | F-box family protein |
chr5:1071721-1072941 REVERSE
Length = 406
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 26/237 (10%)
Query: 10 SLIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSP----CALFVRKSFRLEN 65
++ +IL+ LP ++++K VSK WL +I +P F P FV S L
Sbjct: 16 TMCEILILLPPETIYKLILVSKRWLEIIASPCFRHTYLAKWKPNFELIGFFVCSSMYLGR 75
Query: 66 EFDFIMIDDKYSIDAPFKTLEFIDDTIR----------IIQSCNGLLLCSSVQFYLPEAK 115
D + P + I D I I S +GLLLC P+A
Sbjct: 76 RIDGTR-RPRAEPSLPLLSTSSIGDEIESSGILKKLGYYIDSADGLLLCGR----HPKA- 129
Query: 116 YYVYNPTTNQYAILPPLTGSADEICGLYLAFD-PLKSPNYKVIR--LLQSEISEPDFQIE 172
YY+++P+T + LP +E+C ++ D P + +YKV+R + ++ ++E
Sbjct: 130 YYLWDPSTQKQQQLPRPRVHFEELCMSLISEDSPDQGFSYKVVRAECVAFPVNSTKVKVE 189
Query: 173 IYSSKINHEWKVSNAGFTLESLDIGTHD-GVFCNGAIHWYTDFGPSFYFDVDKEQVK 228
+SSK + W S LE L + G G ++W+ G +D + E+ +
Sbjct: 190 TFSSKTS-TWSYSEL-ICLEPLSLSPWTPGRVIKGVVYWHARGGKIAIYDSNSEEKR 244
>AT5G03970.1 | Symbols: | F-box family protein |
chr5:1071721-1072977 REVERSE
Length = 418
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 26/237 (10%)
Query: 10 SLIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSP----CALFVRKSFRLEN 65
++ +IL+ LP ++++K VSK WL +I +P F P FV S L
Sbjct: 28 TMCEILILLPPETIYKLILVSKRWLEIIASPCFRHTYLAKWKPNFELIGFFVCSSMYLGR 87
Query: 66 EFDFIMIDDKYSIDAPFKTLEFIDDTIR----------IIQSCNGLLLCSSVQFYLPEAK 115
D + P + I D I I S +GLLLC P+A
Sbjct: 88 RIDGTR-RPRAEPSLPLLSTSSIGDEIESSGILKKLGYYIDSADGLLLCGR----HPKA- 141
Query: 116 YYVYNPTTNQYAILPPLTGSADEICGLYLAFD-PLKSPNYKVIR--LLQSEISEPDFQIE 172
YY+++P+T + LP +E+C ++ D P + +YKV+R + ++ ++E
Sbjct: 142 YYLWDPSTQKQQQLPRPRVHFEELCMSLISEDSPDQGFSYKVVRAECVAFPVNSTKVKVE 201
Query: 173 IYSSKINHEWKVSNAGFTLESLDIGTHD-GVFCNGAIHWYTDFGPSFYFDVDKEQVK 228
+SSK + W S LE L + G G ++W+ G +D + E+ +
Sbjct: 202 TFSSKTS-TWSYSEL-ICLEPLSLSPWTPGRVIKGVVYWHARGGKIAIYDSNSEEKR 256
>AT1G30790.1 | Symbols: | F-box family protein |
chr1:10932713-10933912 FORWARD
Length = 399
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 141/340 (41%), Gaps = 39/340 (11%)
Query: 12 IQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSPCALFV----RKSFRLENEF 67
++IL LP KSL KFK VSK W S+I N F + +S F+ SF + E
Sbjct: 15 VEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRFIVAFSNGSFPSDKEK 74
Query: 68 D-FIMIDDKYSIDAPFKTLEFIDDTIRIIQSCNGLL-LCSSVQFYLPEA---KYYVYNPT 122
FI ++ + +D TI + N L C SV ++ + ++ + NP+
Sbjct: 75 RLFIFSSSHEGHESSSSVITNLDTTIPSLTVSNNLASRCISVNGFIACSLYTRFTICNPS 134
Query: 123 TNQYAILPPL-TGSADEICGLYLAFDPLKSPNYKVIRLLQSEISEPDFQIE-----IYSS 176
T Q +LP L +G A ++ + +DP+ +K + L+ S I D +E +
Sbjct: 135 TRQVIVLPILPSGRAPDMRSTCIGYDPVDD-QFKALALISSCIPNKDSTVEHLVLTLKGD 193
Query: 177 KINHEWKVSNAGFTLESLDIGTHDGVFCNGAIHWYTDFGPS-------FYFDVDKEQVKE 229
K N+ W+ + T C + +Y + P FDV E++
Sbjct: 194 KKNYSWRQIQGNNNIPPYSPVTMR--VCINGVVYYGAWTPRQSMNAVIVCFDVRSEKITF 251
Query: 230 MAMPATPEEWYRRRVLYFRECRGHLY-LVEIYNAPSTKFNVWEME----KDYSGWIVKYR 284
+ P W +L E +G L +V + F++W +E +++S +
Sbjct: 252 IKTPKDVVRWCNDSILM--EYKGKLASIVRNRYSRFDTFDLWVLEDIEKQEWSKQTCEIP 309
Query: 285 I----DLDGIVRAFPGMIR---SYLDPSALNYYVFQIMYI 317
+ ++ +FPG+ + L P+ L+ Y + YI
Sbjct: 310 LSVWDSVENFNMSFPGINKFGEIILAPTCLSGYHLRSFYI 349
>AT1G19160.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
type 3 (InterPro:IPR013187), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT5G52610.1); Has
1084 Blast hits to 1065 proteins in 39 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1084;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:6614162-6615214 REVERSE
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 20/229 (8%)
Query: 11 LIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSPCALFVRKSFRLENEFDFI 70
L++ILL LP+KSL +F VSK S+I + F S V +FR N F
Sbjct: 7 LVEILLRLPVKSLARFLCVSKRCYSIIRSRHFINLYQSRASTRESRVMFAFRDTNTF--- 63
Query: 71 MIDDKYSIDAPFKTLEFIDDTIRIIQSCNGLLLCSSVQFYLPEAKYYVYNPTTNQYAILP 130
+ +S+ P ++ ID T + C L+C F L ++ NP T + + P
Sbjct: 64 FRWNFFSLSQPPSSVTNIDSTSYCMPVCVNGLICVEHMFRL-----WICNPVTKKITLFP 118
Query: 131 PLTGSADEICGLYLAFDPLKSPNYKVIRLLQSEISEPDFQIEIYSSKINHEWKVSNAG-- 188
G + Y+ +DP+ YKV+ L + + P + +E+++ W++ A
Sbjct: 119 D-CGPRKQFTTWYMGYDPINY-QYKVLYLSREHLIAP-YIVEVFTFGDEGSWRMIEADEN 175
Query: 189 -FTLESLDIGTHDGVFCNGAIHWYTDFGPSFY-FDVDKEQV-KEMAMPA 234
+ E+ + TH GV GA YT G FDV E+ K + MPA
Sbjct: 176 FHSPETRGVCTH-GVLYYGA---YTGDGAKIVRFDVRTEKFGKFIEMPA 220
>AT3G08750.1 | Symbols: | F-box family protein |
chr3:2656716-2657825 REVERSE
Length = 369
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 35/244 (14%)
Query: 4 LPTTMISLIQ-ILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSPCALFVRKSFR 62
LP+ LI+ IL +P +SL +FKS K W +LIT F SP F+R
Sbjct: 9 LPSLPFELIEEILYKIPAESLIRFKSTCKKWYNLITEKRFMYNHLDHYSP-ERFIRT--- 64
Query: 63 LENEFDFIMIDDKYSI--DAPFKTLEFIDD-TIRIIQSCNGLLLCSSVQFYLPEAKYYVY 119
+D +ID I DA EF D I + C+GL+LC+ ++ + V+
Sbjct: 65 ----YDQQIIDPVTEILSDALIPD-EFRDLYPIYSMVHCDGLMLCTCRKW---DNSLAVW 116
Query: 120 NPTTNQYAILPPLTGSADEICGLYLAF------DPLKSPNYKVIRLLQS--EISEPDFQI 171
NP + + P +C L+ + D + NYK+++LL + + D
Sbjct: 117 NPVLREIKWIKP------SVCYLHTDYVGIGYDDNVSRDNYKILKLLGRLPKDDDSDPNC 170
Query: 172 EIYSSKINHEWKVSNAGFTLESLDIGTHDGVFCNGAIHWYTDFGPSFY---FDVDKEQVK 228
EIY K + WK A F + +DI ++GV G ++W F FD E K
Sbjct: 171 EIYEFK-SDSWKTLVAKFDWD-IDIRCNNGVSVKGKMYWIAKKKEDFTIIRFDFSTETFK 228
Query: 229 EMAM 232
E+ +
Sbjct: 229 EICV 232
>AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD
Length = 427
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 116/293 (39%), Gaps = 68/293 (23%)
Query: 4 LPTTMISLIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSR---RLFPFNSPCALFVRKS 60
LP +I+ +ILL LP KS+ +F+ VSK + +L ++P F++ L N RK
Sbjct: 36 LPPEIIT--EILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKL 93
Query: 61 FRLENEF-------------DFIMIDDKYSI-DAPFKTLEFI---------DDT------ 91
+ D ++ Y + D P E I DD
Sbjct: 94 IVSSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKL 153
Query: 92 ---------IRIIQSCNGLLLCSSVQFYLPEAKYYVYNPTTNQYAILP------PLTGSA 136
+ I+ S NGL+ S E ++YNPTT LP +
Sbjct: 154 NAKSYRRNWVEIVGSSNGLVCISP-----GEGAVFLYNPTTGDSKRLPENFRPKSVEYER 208
Query: 137 DEICGLYLAFDPLKSPNYKVIRLLQSEISEPDFQIEIYSSKINHEWKVSNAGFTLESLDI 196
D FD L + +YK+++L+ + SE +YS K + ++ N + E D
Sbjct: 209 DNFQTYGFGFDGL-TDDYKLVKLVAT--SEDILDASVYSLKADSWRRICNLNY--EHNDG 263
Query: 197 GTHDGVFCNGAIHWYTDFGPSFY-------FDVDKEQVKEMAMPATPEEWYRR 242
GV NGAIHW F S + FD+ E+ +EM +P E+ R
Sbjct: 264 SYTSGVHFNGAIHWV--FTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHR 314
>AT3G52320.1 | Symbols: | F-box family protein |
chr3:19403020-19404192 REVERSE
Length = 390
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 1 LRQLPTTMISLIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSPCALFVRKS 60
L ++P M LI IL+ LP KSL +FK VSK WLSLIT+ F+ R F +SP LF
Sbjct: 24 LPEIPEEM--LIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCLFAYLV 81
Query: 61 FRLENEFDFIMID--DKYSIDAPFKTLEFIDD--TIRI-----IQSCNGLLLCSSVQFYL 111
R EN+ ++++ D ++ ID TI I + + GLL Y
Sbjct: 82 DR-ENQSKYLLLQSSSSSRHDHSDTSVSVIDQHSTIPIMGGYLVNAARGLLC------YR 134
Query: 112 PEAKYYVYNPTTNQYAILPPLTGSADEICGLYLAFDPLKSPNYKVIRL 159
+ V NP+T Q LP + + + DP YKV+ L
Sbjct: 135 TGRRVKVCNPSTRQIVELPIMRSKTN--VWNWFGHDPFHD-EYKVLSL 179
>AT4G09190.1 | Symbols: | F-box family protein |
chr4:5855176-5856327 FORWARD
Length = 383
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 135/342 (39%), Gaps = 63/342 (18%)
Query: 11 LIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFP---FNSPCALFVRKSFRLENEF 67
+++I+ LP KS+ +F+SVSK W S+IT P F+ + + PC L +
Sbjct: 27 IVEIVSSLPAKSIVRFRSVSKLWSSIITTPDFTSSVVTRSLSSRPCVLLI---------- 76
Query: 68 DFIMIDDKYSIDAPF---KTLEFIDDTIRIIQSCNGLLLCSSVQ--FYLPEAK--YYVYN 120
F D + +P KT +++ I + L C SV YL + ++ N
Sbjct: 77 -FQKHDKLFFFASPVHQKKTCPNVENFQYTIPNNGKLQRCESVHGLIYLETSTNVMFIRN 135
Query: 121 PTTNQYAILPPLTGSADEICGLYLAFDPLKSPNYKVIRLLQSEISEPDFQIEIYSSKINH 180
P T + LP L +L +DP+ YKV+ +L+ +I I +
Sbjct: 136 PITKSFFTLPKLDSKEGRPLTGFLGYDPING-KYKVLCILKER-----NKIGILTLGAQE 189
Query: 181 EWKVSNAGFTLESLDIGTHDGVFCNGAIHWYTDFGPSFY-------FDVDKEQVKEMAMP 233
W++ + GF G + +G I++ FG FD+ E+ + P
Sbjct: 190 SWRILSKGFLSHYKVTGYAKCI--DGVIYYEGSFGDGLRQELAIMSFDLRSEKFSLIKHP 247
Query: 234 ATPEEWYRRRVLYFRECRGHLYLVEIYNAPSTKFNVWEME--KDYSGWI----------V 281
+ G L LV ++ ++ ++W +E ++ WI +
Sbjct: 248 KKSSI-----ATCWSSYEGRLALV---SSIASGVSLWILEDADNHKQWIYKHFPSHREFI 299
Query: 282 KYRIDLDGIVRAFPGMIRSYLDPSALN------YYVFQIMYI 317
K R L G+ R + SY LN Y F+I+Y+
Sbjct: 300 KERWKLKGVTRTGEFIYTSY-RAYVLNVEGRVLYQWFRILYV 340
>AT3G17280.1 | Symbols: | F-box family protein |
chr3:5903453-5904613 REVERSE
Length = 386
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 87/213 (40%), Gaps = 27/213 (12%)
Query: 11 LIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSPCALFVRKSFRLENEFDFI 70
L +IL LP KS+ K K+ K W +L +P F + + +F+ D
Sbjct: 12 LPEILSRLPTKSIPKLKTTCKKWYALFKDPKFVEKKLGKAARETVFLMNHEVNSISVDIH 71
Query: 71 MIDDKYSIDAPFKTL----EFIDDTIRIIQSCNGLLLCSSVQFYLPEAKYYVYNPTTNQY 126
I YS+ F E D I I CNGL LC+++ L V+NP T Q
Sbjct: 72 GIPKGYSVSMDFTGTLTIPEGSDLEIFRIHHCNGLFLCATMNCRL-----VVWNPCTGQI 126
Query: 127 A-ILPPLTGSADEICGLYLAFDPLKS-PNYKVIRLLQSEISEPDFQIEIYSSKINHEWKV 184
I+P +D+I L D S +YK++R +P +I +SS W+V
Sbjct: 127 TWIIPRTRYDSDDIYALGCGDDKSSSLHSYKILRCCDDNQKKPVSEIYDFSSS---SWRV 183
Query: 185 SNAGFTLESLDIGTHDGVFCNG-----AIHWYT 212
+ G T + CNG + +WY
Sbjct: 184 LD-GVTANCF-------IECNGVALKESAYWYA 208
>AT3G10240.1 | Symbols: | F-box protein-related |
chr3:3166698-3167867 FORWARD
Length = 389
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 29/165 (17%)
Query: 4 LPTTMISLIQILLCLPIKSLFKFKSVSKHWLSLITNPLF--------SRRLFPFNSPCAL 55
+P ++S +ILL LP KS+ +F+ VSK W S+ T P F R L F +
Sbjct: 27 IPLDLVS--EILLRLPEKSVARFRCVSKPWSSITTEPYFINLLTTRSPRLLLCFKANEKF 84
Query: 56 FV------RKSFRLENE-FDFIMIDDKYSIDAPFKTLEFIDDTIRIIQSCNGLLLCSSVQ 108
FV R++F N+ + + D+Y ++ + + + T +S NGL+
Sbjct: 85 FVSSIPQHRQTFETWNKSHSYSQLIDRYHMEFS-EEMNYFPPT----ESVNGLIC----- 134
Query: 109 FYLPEAKYYVYNPTTNQYAILPPLTGSADEICGLYLAFDPLKSPN 153
+ A+ V+NP+T Q ILP G+++++ ++L +DP++ +
Sbjct: 135 -FQESARLIVWNPSTRQLLILPKPNGNSNDLT-IFLGYDPVEGKH 177
>AT4G04690.1 | Symbols: | F-box family protein (FBX15) |
chr4:2373999-2375135 REVERSE
Length = 378
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
Query: 2 RQLPTTMISLIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSPCALFVRKSF 61
R LP ++ +IL P +SL +FKS K W +IT+ F +SP +
Sbjct: 9 RSLPFELVE--EILKKTPAESLNRFKSTCKQWYGIITSKRFMYNHLD-HSP-----ERFI 60
Query: 62 RLENEFDFIMIDDKYSI--DAPFKTLEFIDDTIRIIQSCNGLLLC---SSVQFYLPEAKY 116
R+++ ++D I D+P + + + C+GL+LC S EA
Sbjct: 61 RIDDHKTVQIMDPMTGIFSDSPVPDVFRSPHSFASMVHCDGLMLCICSDSSYERTREANL 120
Query: 117 YVYNPTTNQYAILPPLTGSADEICGLYLAFDPLKSPNYKVIRLLQSEISEPDFQIEIYSS 176
V+NP T + + PL S E + +D NYK++R +S D + EIY
Sbjct: 121 AVWNPVTKKIKWIEPL-DSYYETDYFGIGYDNTCRENYKIVR-FSGPMSFDDTECEIYEF 178
Query: 177 KINHEWKVSNAGFTLESLDIGTH-DGVFCNGAIHWYTDFGPSF--YFDVDKEQVKEMAM 232
K + W+ + + D+ T GV G ++W D F FD E K + +
Sbjct: 179 K-SDSWRTLDTKY----WDVYTQCRGVSVKGNMYWIADTKEKFILRFDFSMETFKNVCV 232
>AT5G62510.1 | Symbols: | F-box family protein |
chr5:25095373-25096635 REVERSE
Length = 420
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 98/247 (39%), Gaps = 36/247 (14%)
Query: 11 LIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSPCALFVRKSFRLENEFDFI 70
LI+IL LP KSL +FK VSK W SLI + FS R SP + RL
Sbjct: 49 LIEILTRLPHKSLMRFKCVSKQWSSLIRSRFFSNRYLTVASPL-----RPHRLYISLVDH 103
Query: 71 MIDDKYSIDAPFK-------TLEFIDDTIRIIQSCNGLLLCS--SVQFYLPEAKYYVYNP 121
D + +P + + D + +Q GL + + + Y+ K +YNP
Sbjct: 104 KCDSREVCHSPRESVLLSFSSPSSFDQDLTTMQGMGGLHMVTLRGLILYIVCGKACLYNP 163
Query: 122 TTNQYAILPPLT----GSADEICGLY-LAFDPLKSPNYKVIRLLQSEISEPDFQIEI--- 173
TT Q LP + +E LY L DP+ YKV+ S S+ D + I
Sbjct: 164 TTRQSVTLPAIKFNIFVQGNEHSLLYFLGHDPVLD-QYKVVCTFVSSSSQ-DLETIISEH 221
Query: 174 --YSSKINHEWKVSNAGFTLESLDIGTHDGVFCNGAIHWYTDFGPSFY-----FDVDKEQ 226
+ ++ WK + T G+ C G + +Y F F FDV E+
Sbjct: 222 WVFVLEVGGSWK----RIEFDQPHTPTRSGL-CIGGVIYYLAFTSMFQDIVVTFDVRSEE 276
Query: 227 VKEMAMP 233
+ P
Sbjct: 277 FNIIQAP 283
>AT4G19940.1 | Symbols: | F-box family protein |
chr4:10806195-10807430 FORWARD
Length = 411
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 11 LIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSPCALFVRKSFRLENEFDFI 70
+I+IL LP KSL +FKSVSK W SLI + F+ RL +SP LF+ S + +
Sbjct: 40 VIEILTRLPAKSLMRFKSVSKLWSSLICSRNFTNRLLKLSSPPRLFMCLSSSDNSHLKTV 99
Query: 71 MIDDKYSIDAPFKTLEFIDDTIRIIQSCNGLLLC---SSVQFYLPEAKYYVYNPTTNQYA 127
++ D+ + D + G + + + ++ +YN TT Q
Sbjct: 100 LLSLSSPPDSDITMSSSVIDQDLTMPGMKGYQISHVFRGLMCLVKKSSAQIYNTTTRQLV 159
Query: 128 ILPPLTGSA 136
+LP + S
Sbjct: 160 VLPDIEEST 168
>AT3G17540.1 | Symbols: | F-box family protein |
chr3:6002783-6003973 FORWARD
Length = 396
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 51/249 (20%)
Query: 13 QILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSPCALFVRKSFRLENEFDFIMI 72
+IL +P KSL K + K W +L +P F ++ F S L + +F + + +
Sbjct: 17 EILSRVPTKSLAKLHTTCKRWYALFRDPRFVKKNFG-KSERRLMLHSNFGV-----YKIT 70
Query: 73 DDKYSI-DAPFKTLEFI----------DDTIRIIQSCNGLLLCSSVQFYLPEAKYYVYNP 121
DD + I ++ +LEF D TI I C+GL+LCS+ + + V+NP
Sbjct: 71 DDLHGILNSGDPSLEFTSKLSNLKISEDLTITKIFHCDGLILCSTKE----NTRLVVWNP 126
Query: 122 TTNQYAILPPLT--GSADEICGLYLAFDPLKSP--NYKVIRLL----QSEISEPDFQIEI 173
T Q + P S D C L + KS NYK++R + +F+I
Sbjct: 127 CTGQTRWIKPSKRYRSDDSYC---LGYVNSKSSYHNYKILRYCFYYNDQDACVSEFEIYD 183
Query: 174 YSSKINHEWKVSNAGFTLESLDIGTHDGVFCNG-AIHWYTDFGPS--------FYFDVDK 224
+SS+ W+V + T E G+FC+G ++ T F YFD
Sbjct: 184 FSSE---SWRVLDDYCTREW-------GLFCHGMSLKGNTYFVAGEKETGFFMLYFDFKT 233
Query: 225 EQVKEMAMP 233
E+ + + +P
Sbjct: 234 ERFERLPLP 242
>AT3G23880.1 | Symbols: | F-box family protein |
chr3:8622061-8623155 REVERSE
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 24/249 (9%)
Query: 2 RQLPTTMISLIQILLCLPIKSLFKFKSVSKHWLSLITNPLF----------SRRLFPFNS 51
LP M+ +ILL LP+KSL +FK V W SLI+ LF S+ S
Sbjct: 12 HNLPLEMME--EILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKS 69
Query: 52 PCALFVRKSFRLENEFDFIMIDDKYSIDAPFKTLEFIDDTIRIIQSCNGLLLCSSVQFYL 111
P + + L++ + + + D +++ +C+G L+C V +
Sbjct: 70 PYGVITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHG-LVCFHVDY-- 126
Query: 112 PEAKYYVYNPTTN-QYAILPPLTGSADEICGLYLAFDPLKSP-NYKVIRLLQSEISEPDF 169
+ Y++NPT Q + ++D+ C + F +S +YKV+ LLQ +
Sbjct: 127 -DKSLYLWNPTIKLQQRLSSSDLETSDDECVVTYGFGYDESEDDYKVVALLQQR-HQVKI 184
Query: 170 QIEIYSSKINHEWKVSNAGFTLESLDIGTHDGVFCNGAIH----WYTDFGPSFYFDVDKE 225
+ +IYS++ W+ + + + + + G++ NG ++ + +D+ ++
Sbjct: 185 ETKIYSTR-QKLWRSNTSFPSGVVVADKSRSGIYINGTLNWAATSSSSSWTIISYDMSRD 243
Query: 226 QVKEMAMPA 234
+ KE+ P
Sbjct: 244 EFKELPGPV 252
>AT3G23260.1 | Symbols: | F-box family protein |
chr3:8313334-8314422 FORWARD
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 116/280 (41%), Gaps = 22/280 (7%)
Query: 2 RQLPTTMISLIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRR--LFPFNSPCALFVRK 59
R LP + +IL +P K L + +S SK W +L F+++ P + ++
Sbjct: 4 RSLPVELQE--EILSRVPAKYLARLRSTSKQWNALSKTGSFAKKHSANATKEPLIIMLKD 61
Query: 60 SFRLENEFDFIMIDDKYSIDAPFKTLEFIDD-TIRIIQSCNGLLLCSSVQFYLPEAKYYV 118
S + + + + + ++ D I + C+GLLL S++ E V
Sbjct: 62 SRVYLASVNLHGVHNNVAQSFELGSRLYLKDPHISNVFHCDGLLLLCSIK----ENTLEV 117
Query: 119 YNPTTNQYAILPPLTGSADEICGLYLAFDPLKS-PNYKVIRLLQSEISEPDFQI--EIYS 175
+NP + + ++ P E L +D S YKV+R++ + DF+I EIY
Sbjct: 118 WNPCSGEAKLIKPRHSYYKESDFYALGYDNKSSCKKYKVLRVISQVHVQGDFKIEYEIYD 177
Query: 176 SKINHEWKVSNAGFTLESLDIGTHDGVFCNGAIHW-----YTDFGPSFYFDVDKEQVKEM 230
N W+V G T E L I V G+ +W Y + FD E+ + +
Sbjct: 178 F-TNDSWRVH--GATTE-LSIRQKHPVSVKGSTYWVVRNRYFPYKYFLSFDFSTERFQSL 233
Query: 231 AMPATPEEWYRRRVLYFRECRGHLYLVEIYNAPSTKFNVW 270
++P P + + RE + L+ ++ S NVW
Sbjct: 234 SLPQ-PFPYLVTDLSVVREEQLCLFGYYNWSTTSEDLNVW 272
>AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483829
FORWARD
Length = 334
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 13 QILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNSPCA---LFVRKSF--RLENE- 66
+IL+ LP+KSL +F++VSKHW +LIT+ F +R LFV F R E+
Sbjct: 46 EILVRLPVKSLTRFQTVSKHWRTLITSKYFGKRHMALEKSKGCKLLFVCDDFVDRAEDTL 105
Query: 67 -FDFIMIDDKYSIDAPFKTLEF--IDDTIRIIQSCNGLLLCSSVQFYLPEAKYYVYNPTT 123
+ ++ + + EF + I +SC+GL V FY V NP T
Sbjct: 106 FLKTVALEKTSVSEGDEQAFEFEGYKGFLDISESCDGL-----VCFYDTTRAVEVMNPAT 160
Query: 124 NQYAILPPLTGSADEIC----GLYLAFDPLKSPN 153
+ LP ++C + +P++ PN
Sbjct: 161 TMFIELP--LSRIQQLCIYKPNPEVELEPVQDPN 192
>AT1G60370.1 | Symbols: | F-box family protein |
chr1:22244963-22245814 FORWARD
Length = 283
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 87/179 (48%), Gaps = 25/179 (13%)
Query: 1 LRQLPTTMISLIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNS---PCALFV 57
L +P +I I+I LP +S+ +F+ VSK W S+ P F+ LF S P LFV
Sbjct: 7 LESIPIDLI--IEIHSRLPAESVARFRCVSKLWGSMFRRPYFTE-LFLTRSRARPRLLFV 63
Query: 58 ----RK-SFRLENEFDFIMIDDKYSIDAPFKTLEFIDDTIRIIQSCNGLLLCSSVQFYLP 112
RK SF + + I +K S ++F T SC+GL + F +
Sbjct: 64 LQHNRKWSFSVFSSPQNQNIYEKPSFVVADFHMKFSVSTFPDFHSCSGL-----IHFSMM 118
Query: 113 EAKY---YVYNPTTNQYAILPPLTGSADEICGLYLAFDPLKSPNYKVIRLLQSEISEPD 168
+ Y V NP T QYA+LP LT + E ++ +DP++ K I++L +S+PD
Sbjct: 119 KGAYTVPVVCNPRTGQYAVLPKLTRTRYENSYSFVGYDPIE----KQIKVL--FMSDPD 171
>AT2G16810.1 | Symbols: | F-box family protein (FBX8) |
chr2:7287944-7288831 REVERSE
Length = 295
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 30/242 (12%)
Query: 11 LIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRR--LFPFNSPCALFVRKSFRLENEFD 68
LI+IL LP KS+ +FK VSK W SL+++ F R + P +L++ R
Sbjct: 46 LIEILTRLPPKSVMRFKCVSKFWSSLLSSRYFCNRFLIVPSQPQPSLYMCLLDRYNYSKS 105
Query: 69 FIMIDDKYSIDAPFKTLEFIDDTIRIIQSCNGLLL--CSSVQFYLPEAKYYVYNPTTNQY 126
I+ + +P+ F+ D I+ G L F+ K +YNPTT Q
Sbjct: 106 LILSSAPST--SPY---SFVFDQDLTIRKMGGFFLRILRGFIFFTRNLKARIYNPTTRQL 160
Query: 127 AILPPLTGSADEICG------LYLAFDPLKSPNYKVIRLLQSEISEPDFQ-----IEIYS 175
ILP + S D I G ++ DP+ YK++ + S S+ D Q + I+
Sbjct: 161 VILPTIKES-DIIAGPPYNILYFICHDPVND-RYKLLCTV-SYASDNDLQNLKSELWIFV 217
Query: 176 SKINHEWKVSNAGFTLESLDIGTHDGVFCNGAIHWYTDFGPS----FYFDVDKEQVKEMA 231
+ WK F + +H + NG +++ P FDV E+ M
Sbjct: 218 LEAGGSWKRVANEFPHH---VPSHLDLNMNGVLYFLAWTDPHTCMLVSFDVRSEEFNTMQ 274
Query: 232 MP 233
+P
Sbjct: 275 VP 276
>AT5G42430.1 | Symbols: | F-box family protein |
chr5:16971312-16972499 REVERSE
Length = 395
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 121/271 (44%), Gaps = 29/271 (10%)
Query: 11 LIQILLCLPIKSLFKFKSVSKHWLSLITNPLFSRRLFPFNS--PCALFVRKSFRLENEFD 68
+++IL LP KS+ +F VSK W S++ P F+ +S P LF +F E+
Sbjct: 15 ILEILSRLPAKSITRFHCVSKLWGSMLCRPYFNELFLTISSARPRLLF---AFSKHGEWR 71
Query: 69 FI---MIDDKYSIDAPFKTLEFIDDTIRIIQSCN---GLLLCSSVQFYLPEAKYYVYNPT 122
F + Y + T +F + + CN GL+ S++ ++ +A + NP+
Sbjct: 72 FFSSPQPQNPYGKSSFVATADFHTKFSQNLNICNYTSGLVYFSAM--WITKAD-VICNPS 128
Query: 123 TNQYAILPPLTGSADEICGLYLAFDPLKSPNYKVIRLLQSEISEP-DFQIEIYSSKINHE 181
T YA+LP L + E +L FDP+ +KV+ + + +E D I ++
Sbjct: 129 TGHYAMLPKLLLTYGETRSFFL-FDPV-GKQFKVLLMNKINNNETKDIHILTLGTRKVRW 186
Query: 182 WKVSNAGFTLESLDIGTHDGVFCNGAIHWYT----DF-GPSFYFDVDKEQVKEMAMPATP 236
K+ + I +H+ + NGA+++ DF G FDV E+ K + +
Sbjct: 187 RKIQQCPL----IHIVSHEWICINGALYYIAYNIDDFLGYIVCFDVRSEKFKCLNLNQDC 242
Query: 237 EEWYRRRVLYFRECRGHLYLVEIYNAPSTKF 267
+++Y+ +G L +V + A F
Sbjct: 243 FSERSTKLIYY---KGKLGVVNLKYAHGGGF 270