Jatropha Genome Database

JcCA0231431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0231431.10 - phase: 0 /TE/partial
         (858 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   431   e-120
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   263   5e-70
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...   157   3e-38
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    97   4e-20

>AT4G23160.1 | Symbols:  | protein kinase family protein |
           chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  431 bits (1107), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/497 (44%), Positives = 315/497 (63%), Gaps = 13/497 (2%)

Query: 306 KEPRTVRQALAHPGWKHAMEEEIAALHKNETWTLVPRHTNMNVIGSKWVFKTKHKSDGTL 365
           KEP T  +A     W  AM++EI A+    TW +     N   IG KWV+K K+ SDGT+
Sbjct: 84  KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTI 143

Query: 366 DRLKARLVAKGFHQVDGQDFTETFSPVIKPGTIRLVLSIALVLKWQIRQLDVKNAFLHGH 425
           +R KARLVAKG+ Q +G DF ETFSPV K  +++L+L+I+ +  + + QLD+ NAFL+G 
Sbjct: 144 ERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGD 203

Query: 426 ITEDLYMAQPSGMI----DSQFPNYVCKLKRALYGLKQAPRAWFDRLSRFLVSYGFVCSL 481
           + E++YM  P G      DS  PN VC LK+++YGLKQA R WF + S  L+ +GFV S 
Sbjct: 204 LDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSH 263

Query: 482 ADPSLFIFQSSKGMIALLIYVDDMLLTGSSAVLLDGFVQLLCKEFAMKDLGQLHHFLGIE 541
           +D + F+  ++   + +L+YVDD+++  ++   +D     L   F ++DLG L +FLG+E
Sbjct: 264 SDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLE 323

Query: 542 VTHTSDGLLLNQFHYALTLLDRFGMIDSKPMSTPSELQPPVTKAAAS----VDATLYRSI 597
           +  ++ G+ + Q  YAL LLD  G++  KP S P  + P VT +A S    VDA  YR +
Sbjct: 324 IARSAAGINICQRKYALDLLDETGLLGCKPSSVP--MDPSVTFSAHSGGDFVDAKAYRRL 381

Query: 598 VGALQYLTLTRPDIAFSVNFVSQFMHDPTVIHMKFVHRILRYVKGTLDHGLHFTSNSTLT 657
           +G L YL +TR DI+F+VN +SQF   P + H + V +IL Y+KGT+  GL ++S + + 
Sbjct: 382 IGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQ 441

Query: 658 LQGFADADWAGCPITRRSTTGYCTFLGSNLISWCAKKQHTVSRSSTEAEYRAMAHTTAEL 717
           LQ F+DA +  C  TRRST GYC FLG++LISW +KKQ  VS+SS EAEYRA++  T E+
Sbjct: 442 LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEM 501

Query: 718 TWLTYLLKEFSIPITVPPILFCDNLSALYLTINPVFHARSKHIELDYHFVRER-VAQGLL 776
            WL    +E  +P++ P +LFCDN +A+++  N VFH R+KHIE D H VRER V Q  L
Sbjct: 502 MWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATL 561

Query: 777 VTKYIPTTQQVADIFTK 793
              +    +Q  D FT+
Sbjct: 562 SYSFQAYDEQ--DGFTE 576


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
           chrM:227709-228431 REVERSE
          Length = 240

 Score =  263 bits (671), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 130/223 (58%), Positives = 163/223 (73%), Gaps = 1/223 (0%)

Query: 498 LLIYVDDMLLTGSSAVLLDGFVQLLCKEFAMKDLGQLHHFLGIEVTHTSDGLLLNQFHYA 557
           LL+YVDD+LLTGSS  LL+  +  L   F+MKDLG +H+FLGI++     GL L+Q  YA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 558 LTLLDRFGMIDSKPMSTPSELQPPVTKAAASV-DATLYRSIVGALQYLTLTRPDIAFSVN 616
             +L+  GM+D KPMSTP  L+   + + A   D + +RSIVGALQYLTLTRPDI+++VN
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 122

Query: 617 FVSQFMHDPTVIHMKFVHRILRYVKGTLDHGLHFTSNSTLTLQGFADADWAGCPITRRST 676
            V Q MH+PT+     + R+LRYVKGT+ HGL+   NS L +Q F D+DWAGC  TRRST
Sbjct: 123 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 182

Query: 677 TGYCTFLGSNLISWCAKKQHTVSRSSTEAEYRAMAHTTAELTW 719
           TG+CTFLG N+ISW AK+Q TVSRSSTE EYRA+A T AELTW
Sbjct: 183 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 75/127 (59%), Positives = 97/127 (76%), Gaps = 2/127 (1%)

Query: 279 MMTRSKSSIVKPNPRYALLTTVDSSIPKEPRTVRQALAHPGWKHAMEEEIAALHKNETWT 338
           M+TRSK+ I K NP+Y+L  T+ ++I KEP++V  AL  PGW  AM+EE+ AL +N+TW 
Sbjct: 1   MLTRSKAGINKLNPKYSL--TITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWI 58

Query: 339 LVPRHTNMNVIGSKWVFKTKHKSDGTLDRLKARLVAKGFHQVDGQDFTETFSPVIKPGTI 398
           LVP   N N++G KWVFKTK  SDGTLDRLKARLVAKGFHQ +G  F ET+SPV++  TI
Sbjct: 59  LVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 118

Query: 399 RLVLSIA 405
           R +L++A
Sbjct: 119 RTILNVA 125


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
           chrM:68918-69253 REVERSE
          Length = 111

 Score = 97.1 bits (240), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 61/88 (69%), Gaps = 5/88 (5%)

Query: 603 YLTLTRPDIAFSVNFVSQFMHDPTVIHMKFVHRILRYVKGTLDHGLHFTSNSTLTLQGFA 662
           YLT+TRPD+ F+VN +SQF        M+ V+++L YVKGT+  GL +++ S L L+ FA
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 663 DADWAGCPITRRSTTGYCT-----FLGS 685
           D+DWA CP TRRS TG+C+     FLG+
Sbjct: 62  DSDWASCPDTRRSVTGFCSLVPLWFLGA 89