Jatropha Genome Database

JcCA0225051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0225051.10 + phase: 0 
         (204 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G02070.1 | Symbols:  | protein kinase-related | chr5:405895-4...   147   5e-36
AT3G53840.1 | Symbols:  | protein kinase family protein | chr3:1...   146   1e-35
AT1G11915.1 | Symbols:  | unknown protein | chr1:4021830-4023084...    53   1e-07
AT1G10380.1 | Symbols:  | unknown protein | chr1:3400706-3402110...    50   1e-06

>AT5G02070.1 | Symbols:  | protein kinase-related |
           chr5:405895-408220 REVERSE
          Length = 657

 Score =  147 bits (371), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 82/190 (43%), Positives = 114/190 (60%), Gaps = 9/190 (4%)

Query: 21  CPKCGSMEVPYPLSTGENCGNPNYRIYCNDGALKFLSSQGFYYKILSINPSSYKLVIEPP 80
           CP CG M VPYPLSTG  CG+  YRI C  G L F +  G  Y I SIN  + ++V+ PP
Sbjct: 43  CPNCGPMVVPYPLSTGPTCGDQAYRINCVGGKLYFGALHGSSYVITSINSVTQRIVLRPP 102

Query: 81  -LIQKNTCYSSDLGVGGLMLDENLPFNISTHNTVMLFNCSETILLSPLNCTSSSYCRRFE 139
            L    +C S+D+   GL LD +LPF+I++ NT++L NCS+ +L +P++C+ +S C  + 
Sbjct: 103 GLASSVSCISADVSKQGLELDPHLPFSITSSNTILLLNCSQAMLQAPIDCSPTSLCYSYI 162

Query: 140 EGNREGSGC-KGTLCCHFLKDASMTSHRVRVRVGGCTAYTSVVDI---KSIDPI-DAW-N 193
           + N   S C K  LCC F  D S T++ +R+  GGC AY S V +   K + P    W +
Sbjct: 163 KNN--ASPCSKAPLCCTFRTDGSQTAYTIRINGGGCLAYQSFVGLNPNKEVPPPGKKWPD 220

Query: 194 YGIELQWVPP 203
            G+ELQW  P
Sbjct: 221 TGLELQWALP 230


>AT3G53840.1 | Symbols:  | protein kinase family protein |
           chr3:19945571-19947719 FORWARD
          Length = 639

 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 120/210 (57%), Gaps = 9/210 (4%)

Query: 3   FLVYFLLGLVTRVSAFNACPKCGSMEVPYPLSTGENCGNPNYRIYCND-GALKFLSSQGF 61
           F +  L+   +   AF  CP CGS  VPYPLSTG +CG+P YRI C++ G+L F +  G 
Sbjct: 11  FTLSLLIYFSSTTQAFKRCPNCGSTRVPYPLSTGLDCGDPGYRIRCDNYGSLWFDTLNGS 70

Query: 62  YYKILSINPSSYKLVIEPPLIQKNTCYSSDLGVGGLMLDENLPFNISTHNTVMLFNCSET 121
              I +I+PS  + V+ PP  ++N C S D+   G+ LD NLPFN+S  NTV++ NC++ 
Sbjct: 71  TNPIKTIDPSGQRFVLRPPGFEQNKCVSVDIKYHGIQLDLNLPFNVSCSNTVIIMNCTKD 130

Query: 122 ILLS----PLNCTSSSYCRRFEEGNREGSG-CKG-TLCCHFLKDASMTSHRV-RVRVGGC 174
            L +      NC+ +S C +F   N E  G C+G T CC +   AS+ +++V R R   C
Sbjct: 131 GLDAYSSQGFNCSDNSLCHKFLNANLEARGNCRGVTSCCWYKTGASVNTYKVYRARPDMC 190

Query: 175 TAYTSVVDIKSIDPIDAWNY-GIELQWVPP 203
           +AY S +++    P+  W    +E+ W  P
Sbjct: 191 SAYQSFMNLDLTIPVSKWGEPAVEILWEAP 220


>AT1G11915.1 | Symbols:  | unknown protein | chr1:4021830-4023084
           FORWARD
          Length = 329

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 21/174 (12%)

Query: 24  CGSMEVPYPLSTGENCGNPNYR--IYCNDGALKF-LSSQGFYYKILSINPSSYKLVIEPP 80
           CG++ + YP S  + CG+P YR  + C+D   K  L +    Y + SI+ S   L++  P
Sbjct: 35  CGNIPINYPFSIDDGCGSPYYRHMLICSDNDTKLELRTPSGKYPVKSISYSDPHLLVSDP 94

Query: 81  LIQKNTCYSSDLGVGGLMLDENLPFNISTHNTVMLFNC-SETILLSPLNCTSSSYCRRFE 139
            +       +        +D +  F +S  N  + FNC ++ +++ P       +C RF 
Sbjct: 95  FMWNCQDRDNFRPTRSFSIDSSTHFTVSPQNDYLFFNCNTDKVIVEP----KPLFCERFP 150

Query: 140 EGNREGSGCKGTLCCHFLKDASMTSHRV-------------RVRVGGCTAYTSV 180
           +           LC H  +  S    RV             R+ +  C  YTSV
Sbjct: 151 DRCDSSCDSSSYLCRHLPECGSALGSRVSCCSYYPKATQSLRLMLQDCATYTSV 204


>AT1G10380.1 | Symbols:  | unknown protein | chr1:3400706-3402110
           FORWARD
          Length = 305

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 25/203 (12%)

Query: 19  NACPK-CGSMEVPYPLSTGENCGNPNYRIY--CN-DGALKFLSSQGFYYKILSINPSSYK 74
            AC K CG + + YPL TG  CG+P +  Y  C+ D     L++    Y I S++ +  +
Sbjct: 27  QACQKTCGQIPIKYPLGTGSGCGDPRFTRYITCDPDQQTLTLTTHTGSYPITSVDYAKQE 86

Query: 75  LVIEPPLIQKNTCYSSDLGVGGLMLDENLPFNISTHNTVMLFNCS--ETILLSPL----- 127
           + +  P +    C     G G   LD + PF+        L +CS  E+ + +PL     
Sbjct: 87  IYVTDPSMSTCACTRPSHGFG---LDWDAPFSFHDDTVFTLLDCSVDESPVFTPLSNGSG 143

Query: 128 -----NCTSSSYCRRFEEGNREGS--GCKGTLCCHFLKDASMTSHRVRVRVGGCTAYTSV 180
                +  SSS C       R  S    + + CC ++      S  + +    C++Y+  
Sbjct: 144 RVSLCDRQSSSICTFLYSNCRAISLINLQVSTCCVYVPLDLGPSFEMDLNKLKCSSYSGF 203

Query: 181 VDI---KSIDPIDAWNYGIELQW 200
            ++   +   P + WNYGI L++
Sbjct: 204 YNLGPGQESHP-ENWNYGIALKY 225