Jatropha Genome Database

JcCA0224821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0224821.10 + phase: 0 
         (164 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G62660.1 | Symbols:  | beta-fructosidase (BFRUCT3) / beta-fru...    68   2e-12
AT1G12240.1 | Symbols: ATBETAFRUCT4, VAC-INV | ATBETAFRUCT4; bet...    67   4e-12

>AT1G62660.1 | Symbols:  | beta-fructosidase (BFRUCT3) /
           beta-fructofuranosidase / invertase, vacuolar |
           chr1:23199949-23203515 FORWARD
          Length = 648

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 5/69 (7%)

Query: 79  SLGTSQDTAKPEILRPVSRGVSAGVSQKAN----LISSHSESPDYPWNNSMLSWQRTAFH 134
           +L  + D +K EI    SR   AGVS+K+N    + S   +   +PWNN++LSWQRTAFH
Sbjct: 52  TLIVTHDGSKAEIATE-SRPRMAGVSEKSNDGVWISSDDGKVEAFPWNNTILSWQRTAFH 110

Query: 135 FQPEKNWMN 143
           FQPEKNWMN
Sbjct: 111 FQPEKNWMN 119


>AT1G12240.1 | Symbols: ATBETAFRUCT4, VAC-INV | ATBETAFRUCT4;
           beta-fructofuranosidase/ hydrolase, hydrolyzing
           O-glycosyl compounds | chr1:4153699-4157457 FORWARD
          Length = 664

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 83  SQDTAKPEILRPVSRGVSAGVSQKAN----LISSHSESPDYPWNNSMLSWQRTAFHFQPE 138
           S D    E     SR   AGVS+K N     +S    +P + WNNSMLSWQRTAFHFQPE
Sbjct: 70  SNDEGIDETETITSRARLAGVSEKRNDGLWKLSGDRNTPAFEWNNSMLSWQRTAFHFQPE 129

Query: 139 KNWMN 143
           +NWMN
Sbjct: 130 QNWMN 134