Jatropha Genome Database

JcCA0224581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0224581.10 - phase: 0 /partial
         (319 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08980.1 | Symbols: ATAMI1, AMI1, ATTOC64-I | AMI1 (AMIDASE 1...   325   2e-89
AT3G17970.1 | Symbols: atToc64-III | atToc64-III (Arabidopsis th...   269   2e-72
AT5G09420.1 | Symbols: ATTOC64-V, MTOM64 | ATTOC64-V (ARABIDOPSI...   258   3e-69
AT3G25660.1 | Symbols:  | glutamyl-tRNA(Gln) amidotransferase, p...    75   6e-14
AT5G07360.1 | Symbols:  | amidase family protein | chr5:2326925-...    67   2e-11
AT5G64440.1 | Symbols: AtFAAH | AtFAAH (Arabidopsis thaliana fat...    65   5e-11

>AT1G08980.1 | Symbols: ATAMI1, AMI1, ATTOC64-I | AMI1 (AMIDASE 1);
           amidase/ hydrolase, acting on carbon-nitrogen (but not
           peptide) bonds / indoleacetamide hydrolase |
           chr1:2884455-2886430 FORWARD
          Length = 425

 Score =  325 bits (834), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 176/322 (54%), Positives = 210/322 (65%), Gaps = 32/322 (9%)

Query: 1   MARNPDYGAFMEKFVLKPTNSSDELP-LNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAA 59
           MA N D+GAF+EK  + PT++S   P L GLTFA+KDIFDV+G VTGFGNPDW RTH AA
Sbjct: 1   MATNNDFGAFIEKVTISPTSTSSSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAA 60

Query: 60  TSTAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXX 119
           TSTAP V ++L  GAT +G T+MDEMAYSINGEN HYGTP NP A D VP          
Sbjct: 61  TSTAPVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVA 120

Query: 120 XXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARNPV 179
              +LVDFS+GTDTGGSVRVPASYC I GFRPSHG VST G+ P+AQSFDTVGWFAR+  
Sbjct: 121 VAARLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTA 180

Query: 180 ILNHVGRVLLQLPDLDLVRPSQIIIAEDCFQLSSIPNGRVSQILVKSVEKLFGGQFSVIY 239
            L  VG VLLQ   L+ + PSQ+IIA+DCF+L S+P+  + Q LV SVEK FGG      
Sbjct: 181 TLKRVGCVLLQQHHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLVGSVEKSFGG------ 234

Query: 240 ELFWNPADSLGILRNIYMFRNGPSHVVKHLTLGDYVENKVPSLKHFMSKE--IKEQXYXI 297
                                  + VVK + LG+Y+   VPSLKHFM+ +    +Q + I
Sbjct: 235 -----------------------NTVVKKVNLGEYIGQNVPSLKHFMTSDDVTTQQEFCI 271

Query: 298 XXXXXXXXXMRLLERYEFKNNH 319
                    MRLL+R+EFK NH
Sbjct: 272 PSLMALSSSMRLLQRHEFKINH 293


>AT3G17970.1 | Symbols: atToc64-III | atToc64-III (Arabidopsis
           thaliana translocon at the outer membrane of
           chloroplasts 64-III); binding / carbon-nitrogen ligase,
           with glutamine as amido-N-donor | chr3:6148030-6151794
           FORWARD
          Length = 589

 Score =  269 bits (688), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 139/292 (47%), Positives = 175/292 (59%), Gaps = 33/292 (11%)

Query: 29  GLTFAVKDIFDVDGYVTGFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDEMAYS 88
           GLTFAV D+FD+ GYVTGFG+PDW RTH AA+ST+P V  ++  GATC+GKTV+DE A+S
Sbjct: 60  GLTFAVSDVFDITGYVTGFGHPDWVRTHEAASSTSPVVSTLVEGGATCVGKTVVDEFAFS 119

Query: 89  INGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYCSILG 148
           I+GENKHY +P NP AP  +P               VDF+LG DT G VRVPA YC +LG
Sbjct: 120 ISGENKHYDSPTNPAAPTRIPGGACSGAAVAVATNAVDFALGIDTVGGVRVPAGYCGVLG 179

Query: 149 FRPSHGVVSTAGVIPLAQSFDTVGWFARNPVILNHVGRVLLQLPDLDLVRPSQIIIAEDC 208
           F+ S+G +S  G+IP++ S D+VGWFAR+P  L  VG VLLQLP      P QII+A+DC
Sbjct: 180 FKSSYGAISNTGIIPVSSSLDSVGWFARDPNTLRRVGHVLLQLPFATQRNPRQIILADDC 239

Query: 209 FQLSSIPNGRVSQILVKSVEKLFGGQFSVIYELFWNPADSLGILRNIYMFRNGPSHVVKH 268
           FQL  IP  R++Q++ KS EKLFG Q                              ++KH
Sbjct: 240 FQLLKIPVDRITQVVTKSAEKLFGRQ------------------------------LLKH 269

Query: 269 LTLGDYVENKVPSLKHFM-SKEIKEQXYXIXXXXXXXXXMRLLERYEFKNNH 319
             L  Y E KVPSLK F  +K I      +         M+LL+R+EF  NH
Sbjct: 270 QNLETYFETKVPSLKEFARTKAIANT--KVSTSRLLANVMQLLQRHEFLQNH 319


>AT5G09420.1 | Symbols: ATTOC64-V, MTOM64 | ATTOC64-V (ARABIDOPSIS
           THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF
           CHLOROPLASTS 64-V); amidase/ binding / carbon-nitrogen
           ligase, with glutamine as amido-N-donor |
           chr5:2928316-2931750 FORWARD
          Length = 603

 Score =  258 bits (660), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 137/321 (42%), Positives = 180/321 (56%), Gaps = 35/321 (10%)

Query: 3   RNPDYGAFMEKFVL----KPTNSSDELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHLA 58
           R  D+GAF+++F L     P   + +  L+GLTF++ D FDV  Y+TGFG P W +TH A
Sbjct: 43  REEDFGAFLDRFELLPFPPPPPPAAKQSLSGLTFSISDAFDVKDYITGFGCPQWKKTHEA 102

Query: 59  ATSTAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXX 118
           A  TA  V  +L+ GATC+GKT+MDE+ + I GENKHYGTPINP  PD VP         
Sbjct: 103 AEKTAVVVTTLLKNGATCVGKTIMDELGFGIIGENKHYGTPINPLMPDNVPGGCSSGSAV 162

Query: 119 XXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARNP 178
               +LVDFSLG DT G VRVPA++C ILGFRPS G VS+ GV+P +QS +TVGWFA +P
Sbjct: 163 SVGAELVDFSLGIDTTGGVRVPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVGWFASDP 222

Query: 179 VILNHVGRVLLQLPDLDLVRPSQIIIAEDCFQLSSIPNGRVSQILVKSVEKLFGGQFSVI 238
            +L  VG  LL L  +   R   +I A+D F+LS IP  +  Q++ K++E L G      
Sbjct: 223 SVLCQVGHALLNLSAVTHRRQRSLIFADDLFELSDIPKQKSVQVVRKAIENLSG------ 276

Query: 239 YELFWNPADSLGILRNIYMFRNGPSHVVKHLTLGDYVENKVPSLKHFMSKEIKEQXYXIX 298
              +  P                     KH+ +G YV + VPSL  F  +  K Q     
Sbjct: 277 ---YKTP---------------------KHVNVGQYVASNVPSLAEFCEQSGKSQN-SAS 311

Query: 299 XXXXXXXXMRLLERYEFKNNH 319
                   M  ++R+EFK NH
Sbjct: 312 TLRALSSVMLAIQRHEFKTNH 332


>AT3G25660.1 | Symbols:  | glutamyl-tRNA(Gln) amidotransferase,
           putative | chr3:9339640-9342044 REVERSE
          Length = 537

 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 67/154 (43%), Gaps = 10/154 (6%)

Query: 26  PLNGLTFAVKDIFDVDGYVTGFGNPDWART----HLAATSTAPAVLAILREGATCIGKTV 81
           PL G+   VKD       +   G P  A +    H      A AV  I   G   +GKT 
Sbjct: 107 PLAGVLIGVKD------NICTQGMPSTAASRILEHYRPPFDATAVKKIKELGGIVVGKTN 160

Query: 82  MDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPA 141
           MDE       E   +    NP     VP             +    SLG+DTGGSVR PA
Sbjct: 161 MDEFGMGSTTEASAFQVTANPWDLSRVPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQPA 220

Query: 142 SYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFA 175
           S+C ++G +P++G VS  G++  A S D +G F 
Sbjct: 221 SFCGVVGLKPTYGRVSRFGLMAYASSLDVIGCFG 254


>AT5G07360.1 | Symbols:  | amidase family protein |
           chr5:2326925-2330011 REVERSE
          Length = 659

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 13/176 (7%)

Query: 10  FMEKFVLKPTNSSDEL--------PLNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAATS 61
           + E+   K    +D+L        PL+G+ + +KDI  V GY T +G+  +    L   +
Sbjct: 243 YTEELAYKQAKEADDLLSQGTYLGPLHGIPYGLKDIVAVPGYKTTWGSTSFKDQFLDIEA 302

Query: 62  TAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXX 121
                L     GA  + K V   MAY    +    G   NP   +               
Sbjct: 303 WVYKRLKA--SGAVLVAKLVTGSMAYD---DIWFGGRTRNPWNIEEFSTGSSAGPAASTS 357

Query: 122 XKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARN 177
             +V F++G++T GS+  PA+ C I   RP+ G V   GV+ +++S D +G F R 
Sbjct: 358 AGMVPFAIGSETAGSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRT 413


>AT5G64440.1 | Symbols: AtFAAH | AtFAAH (Arabidopsis thaliana fatty
           acid amide hydrolase); N-(long-chain-acyl)ethanolamine
           deacylase/ amidase | chr5:25766229-25770260 FORWARD
          Length = 607

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 1/149 (0%)

Query: 27  LNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDEMA 86
           L+G+   +KD  D   + T  G   W     +    +  V  +   GA  +GK  M E+ 
Sbjct: 197 LDGIFVTIKDDIDCLPHPTN-GGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKANMHELG 255

Query: 87  YSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYCSI 146
               G N +YGT  NP  P                  L   +LGTD GGSVR+P++ C I
Sbjct: 256 MGTTGNNSNYGTTRNPHDPKRYTGGSSSGSAAIVAAGLCSAALGTDGGGSVRIPSALCGI 315

Query: 147 LGFRPSHGVVSTAGVIPLAQSFDTVGWFA 175
            G + ++G     G +    + + +G  A
Sbjct: 316 TGLKTTYGRTDMTGSLCEGGTVEIIGPLA 344