Jatropha Genome Database
- JcCA0216321.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0216321.10 - phase: 0
(133 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38880.3 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNI... 205 8e-54
AT2G38880.5 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNI... 204 1e-53
AT2G38880.1 | Symbols: ATNF-YB1, HAP3, ATHAP3, HAP3A, NF-YB1 | N... 204 1e-53
AT2G38880.2 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNI... 204 1e-53
AT2G38880.6 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNI... 204 1e-53
AT2G38880.4 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNI... 204 1e-53
AT2G37060.3 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNI... 202 3e-53
AT2G37060.2 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNI... 202 3e-53
AT2G37060.1 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNI... 202 3e-53
AT3G53340.1 | Symbols: NF-YB10 | NF-YB10 (NUCLEAR FACTOR Y, SUBU... 186 4e-48
AT4G14540.1 | Symbols: NF-YB3 | NF-YB3 (NUCLEAR FACTOR Y, SUBUNI... 184 1e-47
AT5G47640.1 | Symbols: NF-YB2 | NF-YB2 (NUCLEAR FACTOR Y, SUBUNI... 176 3e-45
AT2G13570.1 | Symbols: NF-YB7 | NF-YB7 (NUCLEAR FACTOR Y, SUBUNI... 165 6e-42
AT2G47810.1 | Symbols: NF-YB5 | NF-YB5 (NUCLEAR FACTOR Y, SUBUNI... 149 4e-37
AT5G47670.1 | Symbols: NF-YB6 | NF-YB6 (NUCLEAR FACTOR Y, SUBUNI... 148 1e-36
AT5G47670.2 | Symbols: NF-YB6 | NF-YB6 (NUCLEAR FACTOR Y, SUBUNI... 148 1e-36
AT1G21970.1 | Symbols: LEC1, EMB 212, EMB212, NF-YB9 | LEC1 (LEA... 144 2e-35
AT1G09030.1 | Symbols: NF-YB4 | NF-YB4 (NUCLEAR FACTOR Y, SUBUNI... 128 1e-30
AT5G08190.2 | Symbols: NF-YB12 | NF-YB12 (NUCLEAR FACTOR Y, SUBU... 78 2e-15
AT5G23090.4 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBU... 78 2e-15
AT5G08190.1 | Symbols: NF-YB12 | NF-YB12 (NUCLEAR FACTOR Y, SUBU... 78 2e-15
AT5G23090.1 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBU... 78 2e-15
AT5G23090.2 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBU... 78 2e-15
AT5G23090.3 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBU... 64 2e-11
AT2G27470.1 | Symbols: NF-YB11 | NF-YB11 (NUCLEAR FACTOR Y, SUBU... 52 9e-08
>AT2G38880.3 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT
B1); transcription factor | chr2:16238685-16240225
FORWARD
Length = 140
Score = 205 bits (521), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 98/117 (83%), Positives = 104/117 (88%), Gaps = 6/117 (5%)
Query: 1 MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
MA+ P+SPAG ESGG VREQDRYLPIANISRIMKKALP NGKI KDAKDTVQ
Sbjct: 1 MADTPSSPAGDGGESGGS------VREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQ 54
Query: 61 ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
ECVSEFISFITSEASDKCQKEKRKT+NGDDLLWAMATLGFEDY+EPLK+YLARYRE+
Sbjct: 55 ECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREL 111
>AT2G38880.5 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT
B1); transcription factor | chr2:16238685-16240316
FORWARD
Length = 141
Score = 204 bits (519), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/117 (83%), Positives = 104/117 (88%), Gaps = 6/117 (5%)
Query: 1 MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
MA+ P+SPAG ESGG VREQDRYLPIANISRIMKKALP NGKI KDAKDTVQ
Sbjct: 1 MADTPSSPAGDGGESGGS------VREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQ 54
Query: 61 ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
ECVSEFISFITSEASDKCQKEKRKT+NGDDLLWAMATLGFEDY+EPLK+YLARYRE+
Sbjct: 55 ECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREL 111
>AT2G38880.1 | Symbols: ATNF-YB1, HAP3, ATHAP3, HAP3A, NF-YB1 |
NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1); transcription
factor | chr2:16238685-16240316 FORWARD
Length = 141
Score = 204 bits (519), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/117 (83%), Positives = 104/117 (88%), Gaps = 6/117 (5%)
Query: 1 MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
MA+ P+SPAG ESGG VREQDRYLPIANISRIMKKALP NGKI KDAKDTVQ
Sbjct: 1 MADTPSSPAGDGGESGGS------VREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQ 54
Query: 61 ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
ECVSEFISFITSEASDKCQKEKRKT+NGDDLLWAMATLGFEDY+EPLK+YLARYRE+
Sbjct: 55 ECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREL 111
>AT2G38880.2 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT
B1); transcription factor | chr2:16238685-16240316
FORWARD
Length = 141
Score = 204 bits (519), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/117 (83%), Positives = 104/117 (88%), Gaps = 6/117 (5%)
Query: 1 MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
MA+ P+SPAG ESGG VREQDRYLPIANISRIMKKALP NGKI KDAKDTVQ
Sbjct: 1 MADTPSSPAGDGGESGGS------VREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQ 54
Query: 61 ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
ECVSEFISFITSEASDKCQKEKRKT+NGDDLLWAMATLGFEDY+EPLK+YLARYRE+
Sbjct: 55 ECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREL 111
>AT2G38880.6 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT
B1); transcription factor | chr2:16238685-16240143
FORWARD
Length = 112
Score = 204 bits (519), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/117 (84%), Positives = 104/117 (88%), Gaps = 6/117 (5%)
Query: 1 MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
MA+ P+SPAG ESGG VREQDRYLPIANISRIMKKALP NGKI KDAKDTVQ
Sbjct: 1 MADTPSSPAGDGGESGGS------VREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQ 54
Query: 61 ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
ECVSEFISFITSEASDKCQKEKRKT+NGDDLLWAMATLGFEDY+EPLK+YLARYREV
Sbjct: 55 ECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREV 111
>AT2G38880.4 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT
B1); transcription factor | chr2:16238685-16240143
FORWARD
Length = 112
Score = 204 bits (519), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/117 (84%), Positives = 104/117 (88%), Gaps = 6/117 (5%)
Query: 1 MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
MA+ P+SPAG ESGG VREQDRYLPIANISRIMKKALP NGKI KDAKDTVQ
Sbjct: 1 MADTPSSPAGDGGESGGS------VREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQ 54
Query: 61 ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
ECVSEFISFITSEASDKCQKEKRKT+NGDDLLWAMATLGFEDY+EPLK+YLARYREV
Sbjct: 55 ECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREV 111
>AT2G37060.3 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT
B8); transcription factor | chr2:15576336-15577660
FORWARD
Length = 173
Score = 202 bits (515), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/120 (83%), Positives = 109/120 (90%), Gaps = 3/120 (2%)
Query: 1 MAENPT-SPAG-GSHESGGEQSPHS-GVREQDRYLPIANISRIMKKALPANGKIAKDAKD 57
MAE+ SP G GSHESGG+QSP S VREQDR+LPIANISRIMK+ LPANGKIAKDAK+
Sbjct: 1 MAESQAKSPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKE 60
Query: 58 TVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
VQECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFEDY+EPLKVYL RYRE+
Sbjct: 61 IVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREM 120
>AT2G37060.2 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT
B8); transcription factor | chr2:15576336-15577660
FORWARD
Length = 173
Score = 202 bits (515), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/120 (83%), Positives = 109/120 (90%), Gaps = 3/120 (2%)
Query: 1 MAENPT-SPAG-GSHESGGEQSPHS-GVREQDRYLPIANISRIMKKALPANGKIAKDAKD 57
MAE+ SP G GSHESGG+QSP S VREQDR+LPIANISRIMK+ LPANGKIAKDAK+
Sbjct: 1 MAESQAKSPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKE 60
Query: 58 TVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
VQECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFEDY+EPLKVYL RYRE+
Sbjct: 61 IVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREM 120
>AT2G37060.1 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT
B8); transcription factor | chr2:15576336-15577660
FORWARD
Length = 173
Score = 202 bits (515), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/120 (83%), Positives = 109/120 (90%), Gaps = 3/120 (2%)
Query: 1 MAENPT-SPAG-GSHESGGEQSPHS-GVREQDRYLPIANISRIMKKALPANGKIAKDAKD 57
MAE+ SP G GSHESGG+QSP S VREQDR+LPIANISRIMK+ LPANGKIAKDAK+
Sbjct: 1 MAESQAKSPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKE 60
Query: 58 TVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
VQECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFEDY+EPLKVYL RYRE+
Sbjct: 61 IVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREM 120
>AT3G53340.1 | Symbols: NF-YB10 | NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT
B10); transcription factor | chr3:19774667-19775991
REVERSE
Length = 176
Score = 186 bits (472), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 86/101 (85%), Positives = 95/101 (94%), Gaps = 1/101 (0%)
Query: 18 EQSPHS-GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASD 76
+QSP S VREQDR+LPIANISRIMK+ LP NGKIAKDAK+T+QECVSEFISF+TSEASD
Sbjct: 19 DQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASD 78
Query: 77 KCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
KCQ+EKRKTINGDDLLWAMATLGFEDYI+PLKVYL RYRE+
Sbjct: 79 KCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREM 119
>AT4G14540.1 | Symbols: NF-YB3 | NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT
B3); transcription factor | chr4:8344663-8345148 FORWARD
Length = 161
Score = 184 bits (468), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 94/107 (87%), Gaps = 4/107 (3%)
Query: 11 GSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFI 70
G H+ GG S REQDR+LPIAN+SRIMKKALPAN KI+KDAK+TVQECVSEFISFI
Sbjct: 9 GGHKDGGNAS----TREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFI 64
Query: 71 TSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
T EASDKCQ+EKRKTINGDDLLWAM TLGFEDY+EPLKVYL +YREV
Sbjct: 65 TGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREV 111
>AT5G47640.1 | Symbols: NF-YB2 | NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT
B2); transcription factor | chr5:19309414-19309986
FORWARD
Length = 190
Score = 176 bits (447), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 79/92 (85%), Positives = 88/92 (95%)
Query: 26 REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKT 85
REQDR+LPIAN+SRIMKKALPAN KI+KDAK+T+QECVSEFISF+T EASDKCQKEKRKT
Sbjct: 26 REQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKT 85
Query: 86 INGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
INGDDLLWAM TLGFEDY+EPLKVYL R+RE+
Sbjct: 86 INGDDLLWAMTTLGFEDYVEPLKVYLQRFREI 117
>AT2G13570.1 | Symbols: NF-YB7 | NF-YB7 (NUCLEAR FACTOR Y, SUBUNIT
B7); transcription factor | chr2:5655842-5656489 REVERSE
Length = 215
Score = 165 bits (418), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 84/92 (91%)
Query: 26 REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKT 85
+EQDR+LPIAN+ RIMKK LP NGKI+KDAK+TVQECVSEFISF+T EASDKCQ+EKRKT
Sbjct: 35 KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKT 94
Query: 86 INGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
INGDD++WA+ TLGFEDY+ PLKVYL +YR+
Sbjct: 95 INGDDIIWAITTLGFEDYVAPLKVYLCKYRDT 126
>AT2G47810.1 | Symbols: NF-YB5 | NF-YB5 (NUCLEAR FACTOR Y, SUBUNIT
B5); transcription factor | chr2:19582938-19583420
REVERSE
Length = 160
Score = 149 bits (377), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 77/91 (84%)
Query: 25 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRK 84
V+EQDR LPIAN+ RIMK LPAN K++K+AK+T+QECVSEFISF+T EASDKC KEKRK
Sbjct: 49 VKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRK 108
Query: 85 TINGDDLLWAMATLGFEDYIEPLKVYLARYR 115
T+NGDD+ WAMA LGF+DY LK YL RYR
Sbjct: 109 TVNGDDICWAMANLGFDDYAAQLKKYLHRYR 139
>AT5G47670.1 | Symbols: NF-YB6 | NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT
B6); transcription activator/ transcription activator
binding / transcription factor | chr5:19315061-19315975
FORWARD
Length = 234
Score = 148 bits (373), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 88/103 (85%), Gaps = 2/103 (1%)
Query: 15 SGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEA 74
+GGE+ VREQDR++PIAN+ RIM++ LPA+ KI+ D+K+T+QECVSE+ISFIT EA
Sbjct: 48 NGGEEE--CTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEA 105
Query: 75 SDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
+++CQ+E+RKTI +D+LWAM+ LGF+DYIEPL +YL RYRE+
Sbjct: 106 NERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYREL 148
>AT5G47670.2 | Symbols: NF-YB6 | NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT
B6); transcription activator/ transcription activator
binding / transcription factor | chr5:19315358-19315975
FORWARD
Length = 205
Score = 148 bits (373), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 88/103 (85%), Gaps = 2/103 (1%)
Query: 15 SGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEA 74
+GGE+ VREQDR++PIAN+ RIM++ LPA+ KI+ D+K+T+QECVSE+ISFIT EA
Sbjct: 19 NGGEEE--CTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEA 76
Query: 75 SDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
+++CQ+E+RKTI +D+LWAM+ LGF+DYIEPL +YL RYRE+
Sbjct: 77 NERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYREL 119
>AT1G21970.1 | Symbols: LEC1, EMB 212, EMB212, NF-YB9 | LEC1 (LEAFY
COTYLEDON 1); transcription activator/ transcription
factor | chr1:7727750-7729571 REVERSE
Length = 238
Score = 144 bits (363), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 85/100 (85%)
Query: 18 EQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDK 77
+Q P REQD+Y+PIAN+ RIM+K LP++ KI+ DAK+T+QECVSE+ISF+T EA+++
Sbjct: 50 QQQPPCVAREQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANER 109
Query: 78 CQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
CQ+E+RKTI +D+LWAM+ LGF++Y++PL V++ RYRE+
Sbjct: 110 CQREQRKTITAEDILWAMSKLGFDNYVDPLTVFINRYREI 149
>AT1G09030.1 | Symbols: NF-YB4 | NF-YB4 (NUCLEAR FACTOR Y, SUBUNIT
B4); transcription factor | chr1:2908611-2909030 REVERSE
Length = 139
Score = 128 bits (321), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 74/90 (82%)
Query: 27 EQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTI 86
++DR LPIAN+ R+MK+ LP+N KI+K+AK TVQEC +EFISF+T EAS+KC +E RKT+
Sbjct: 3 DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTV 62
Query: 87 NGDDLLWAMATLGFEDYIEPLKVYLARYRE 116
NGDD+ WA++TLG ++Y + + +L +YRE
Sbjct: 63 NGDDIWWALSTLGLDNYADAVGRHLHKYRE 92
>AT5G08190.2 | Symbols: NF-YB12 | NF-YB12 (NUCLEAR FACTOR Y, SUBUNIT
B12); DNA binding / transcription factor |
chr5:2636204-2637125 FORWARD
Length = 162
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 24 GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKR 83
G ++D LP A +++I+K+ LPA+ ++A+DA+D + EC EFI+ I+SE+++ C KE +
Sbjct: 8 GKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDK 67
Query: 84 KTINGDDLLWAMATLGFEDYIEPLKVYLA 112
+TI + +L A+ LGF +Y+E +VY A
Sbjct: 68 RTIAPEHVLKALQVLGFGEYVE--EVYAA 94
>AT5G23090.4 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT
B13); transcription factor | chr5:7749391-7750203
FORWARD
Length = 158
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 24 GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKR 83
G ++D LP A +++I+K+ LP + ++A+DA+D + EC EFI+ ++SE++D C KE +
Sbjct: 8 GKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDK 67
Query: 84 KTINGDDLLWAMATLGFEDYIEPLKVYLA 112
+TI + +L A+ LGF +YIE +VY A
Sbjct: 68 RTIAPEHVLKALQVLGFGEYIE--EVYAA 94
>AT5G08190.1 | Symbols: NF-YB12 | NF-YB12 (NUCLEAR FACTOR Y, SUBUNIT
B12); DNA binding / transcription factor |
chr5:2636204-2637125 FORWARD
Length = 163
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 24 GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKR 83
G ++D LP A +++I+K+ LPA+ ++A+DA+D + EC EFI+ I+SE+++ C KE +
Sbjct: 8 GKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDK 67
Query: 84 KTINGDDLLWAMATLGFEDYIEPLKVYLA 112
+TI + +L A+ LGF +Y+E +VY A
Sbjct: 68 RTIAPEHVLKALQVLGFGEYVE--EVYAA 94
>AT5G23090.1 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT
B13); transcription factor | chr5:7749391-7750203
FORWARD
Length = 159
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 24 GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKR 83
G ++D LP A +++I+K+ LP + ++A+DA+D + EC EFI+ ++SE++D C KE +
Sbjct: 8 GKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDK 67
Query: 84 KTINGDDLLWAMATLGFEDYIEPLKVYLA 112
+TI + +L A+ LGF +YIE +VY A
Sbjct: 68 RTIAPEHVLKALQVLGFGEYIE--EVYAA 94
>AT5G23090.2 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT
B13); transcription factor | chr5:7749391-7750203
FORWARD
Length = 159
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 24 GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKR 83
G ++D LP A +++I+K+ LP + ++A+DA+D + EC EFI+ ++SE++D C KE +
Sbjct: 8 GKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDK 67
Query: 84 KTINGDDLLWAMATLGFEDYIEPLKVYLA 112
+TI + +L A+ LGF +YIE +VY A
Sbjct: 68 RTIAPEHVLKALQVLGFGEYIE--EVYAA 94
>AT5G23090.3 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT
B13); transcription factor | chr5:7749391-7750203
FORWARD
Length = 146
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 44 ALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDY 103
+LP + ++A+DA+D + EC EFI+ ++SE++D C KE ++TI + +L A+ LGF +Y
Sbjct: 15 SLPKDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIAPEHVLKALQVLGFGEY 74
Query: 104 IEPLKVYLA 112
IE +VY A
Sbjct: 75 IE--EVYAA 81
>AT2G27470.1 | Symbols: NF-YB11 | NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT
B11); transcription factor | chr2:11745196-11746375
REVERSE
Length = 275
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 32 LPIANISRIMKKALPA-----NGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTI 86
LP+A + R++KK L + I K+A E FI ++++ A+D C+ +R+T+
Sbjct: 11 LPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATANDFCKDARRQTM 70
Query: 87 NGDDLLWAMATLGFEDYIEPLKVYLARY 114
DD+ A+ + F +++EPLK L +
Sbjct: 71 KADDVFKALEEMDFSEFLEPLKSSLEDF 98