Jatropha Genome Database

JcCA0206521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0206521.10 + phase: 0 
         (251 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G01240.1 | Symbols:  | amino acid permease, putative | chr5:9...   432   e-121
AT2G38120.1 | Symbols: AUX1, WAV5, PIR1, MAP1 | AUX1 (AUXIN RESI...   422   e-119
AT2G21050.1 | Symbols:  | amino acid permease, putative | chr2:9...   415   e-116
AT1G77690.1 | Symbols: LAX3 | LAX3 (LIKE AUX1 3); amino acid tra...   400   e-112
AT5G01240.2 | Symbols:  | amino acid permease, putative | chr5:9...   340   5e-94

>AT5G01240.1 | Symbols:  | amino acid permease, putative |
           chr5:98228-101493 FORWARD
          Length = 488

 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/259 (82%), Positives = 231/259 (89%), Gaps = 8/259 (3%)

Query: 1   MLPQKQAEEAIVPNFSE------TENEARQEELE-DEHSMFNVKSFLWHGGSAWDAWFSC 53
           M  +KQAEE+IV +  +       E+ A +E+++ +  + F++KSFLWHGGSAWDAWFSC
Sbjct: 1   MSGEKQAEESIVVSGEDEVAGRKVEDSAAEEDIDGNGGNGFSMKSFLWHGGSAWDAWFSC 60

Query: 54  ASNQVAQVLLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYLISVLYIEYRTRKEK-ENVS 112
           ASNQVAQVLLTLPYSFSQLGMLSGIL QIFYGLMGSWTAYLISVLY+EYR R EK E  S
Sbjct: 61  ASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGLMGSWTAYLISVLYVEYRARMEKQEAKS 120

Query: 113 FKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWT 172
           FKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYIND LDKRTWT
Sbjct: 121 FKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWT 180

Query: 173 YIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGVTHTGPKKLVL 232
           YIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIA+ +HGQ EGVTH+GP KLVL
Sbjct: 181 YIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASFLHGQAEGVTHSGPTKLVL 240

Query: 233 YFTGATNILYTFGGHAVTV 251
           YFTGATNILYTFGGHAVTV
Sbjct: 241 YFTGATNILYTFGGHAVTV 259


>AT2G38120.1 | Symbols: AUX1, WAV5, PIR1, MAP1 | AUX1 (AUXIN
           RESISTANT 1); amino acid transmembrane transporter/
           auxin binding / auxin influx transmembrane transporter/
           transporter | chr2:15973493-15976792 FORWARD
          Length = 485

 Score =  422 bits (1086), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/253 (80%), Positives = 218/253 (86%), Gaps = 5/253 (1%)

Query: 4   QKQAEEAIVPNFSETE-----NEARQEELEDEHSMFNVKSFLWHGGSAWDAWFSCASNQV 58
             +  EAIV N + T+        +  E  D  +  N+ +FLWHGGS WDAWFSCASNQV
Sbjct: 1   MSEGVEAIVANDNGTDQVNGNRTGKDNEEHDGSTGSNLSNFLWHGGSVWDAWFSCASNQV 60

Query: 59  AQVLLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYLISVLYIEYRTRKEKENVSFKNHVI 118
           AQVLLTLPYSFSQLGMLSGI+ QIFYGL+GSWTAYLISVLY+EYR RKEKE  SFKNHVI
Sbjct: 61  AQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYLISVLYVEYRARKEKEGKSFKNHVI 120

Query: 119 QWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGAC 178
           QWFEVLDGLLG YWKA GLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGAC
Sbjct: 121 QWFEVLDGLLGSYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGAC 180

Query: 179 CATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGVTHTGPKKLVLYFTGAT 238
           CATTVFIPSFHNYRIWSFLGLGMTTYTAWYL IA+++HGQ EGV H+GP KLVLYFTGAT
Sbjct: 181 CATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIASIIHGQAEGVKHSGPTKLVLYFTGAT 240

Query: 239 NILYTFGGHAVTV 251
           NILYTFGGHAVTV
Sbjct: 241 NILYTFGGHAVTV 253


>AT2G21050.1 | Symbols:  | amino acid permease, putative |
           chr2:9034289-9036439 FORWARD
          Length = 483

 Score =  415 bits (1067), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 196/248 (79%), Positives = 221/248 (89%), Gaps = 5/248 (2%)

Query: 4   QKQAEEAIVPNFSETENEARQEELEDEHSMFNVKSFLWHGGSAWDAWFSCASNQVAQVLL 63
           +K AE  +V N+ E E + +  +++ + S        WHGGSA+DAWFSCASNQVAQVLL
Sbjct: 5   EKAAETVVVGNYVEMEKDGKALDIKSKLS-----DMFWHGGSAYDAWFSCASNQVAQVLL 59

Query: 64  TLPYSFSQLGMLSGILFQIFYGLMGSWTAYLISVLYIEYRTRKEKENVSFKNHVIQWFEV 123
           TLPYSFSQLGMLSGILFQ+FYG++GSWTAYLIS+LY+EYRTRKE+E V+F+NHVIQWFEV
Sbjct: 60  TLPYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFEV 119

Query: 124 LDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTV 183
           LDGLLG +W+  GLAFNCTFLLFGSVIQLIACASNIYYIND+LDKRTWTYIFGACCATTV
Sbjct: 120 LDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTV 179

Query: 184 FIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGVTHTGPKKLVLYFTGATNILYT 243
           FIPSFHNYRIWSFLGL MTTYTAWYLTIA+++HGQVEGV H+GP KLVLYFTGATNILYT
Sbjct: 180 FIPSFHNYRIWSFLGLLMTTYTAWYLTIASILHGQVEGVKHSGPSKLVLYFTGATNILYT 239

Query: 244 FGGHAVTV 251
           FGGHAVTV
Sbjct: 240 FGGHAVTV 247


>AT1G77690.1 | Symbols: LAX3 | LAX3 (LIKE AUX1 3); amino acid
           transmembrane transporter/ auxin influx transmembrane
           transporter/ transporter | chr1:29201232-29203317
           REVERSE
          Length = 470

 Score =  400 bits (1027), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/251 (75%), Positives = 211/251 (84%), Gaps = 1/251 (0%)

Query: 2   LPQKQAEEAIVPNFSETENEARQEELEDEHSM-FNVKSFLWHGGSAWDAWFSCASNQVAQ 60
           +  ++ E  +  N+ E E E        + S    + +F WHGGS +DAWFSCASNQVAQ
Sbjct: 1   MAAEKIETVVAGNYLEMEREEENISGNKKSSTKTKLSNFFWHGGSVYDAWFSCASNQVAQ 60

Query: 61  VLLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYLISVLYIEYRTRKEKENVSFKNHVIQW 120
           VLLTLPYSFSQLGM+SGILFQ+FYGLMGSWTAYLISVLY+EYRTRKE+E   F+NHVIQW
Sbjct: 61  VLLTLPYSFSQLGMMSGILFQLFYGLMGSWTAYLISVLYVEYRTRKEREKFDFRNHVIQW 120

Query: 121 FEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCA 180
           FEVLDGLLG +W+  GL FNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACCA
Sbjct: 121 FEVLDGLLGKHWRNLGLIFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCA 180

Query: 181 TTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVEGVTHTGPKKLVLYFTGATNI 240
           TTVFIPSFHNYRIWSFLGL MTTYT+WYLTIA+++HGQ E V H+GP  +VLYFTGATNI
Sbjct: 181 TTVFIPSFHNYRIWSFLGLAMTTYTSWYLTIASLLHGQAEDVKHSGPTTMVLYFTGATNI 240

Query: 241 LYTFGGHAVTV 251
           LYTFGGHAVTV
Sbjct: 241 LYTFGGHAVTV 251


>AT5G01240.2 | Symbols:  | amino acid permease, putative |
           chr5:98663-101493 FORWARD
          Length = 408

 Score =  340 bits (872), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 165/179 (92%), Positives = 169/179 (94%), Gaps = 1/179 (0%)

Query: 74  MLSGILFQIFYGLMGSWTAYLISVLYIEYRTRKEK-ENVSFKNHVIQWFEVLDGLLGPYW 132
           MLSGIL QIFYGLMGSWTAYLISVLY+EYR R EK E  SFKNHVIQWFEVLDGLLGPYW
Sbjct: 1   MLSGILLQIFYGLMGSWTAYLISVLYVEYRARMEKQEAKSFKNHVIQWFEVLDGLLGPYW 60

Query: 133 KAAGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYR 192
           KAAGLAFNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYR
Sbjct: 61  KAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYR 120

Query: 193 IWSFLGLGMTTYTAWYLTIAAVVHGQVEGVTHTGPKKLVLYFTGATNILYTFGGHAVTV 251
           IWSFLGLGMTTYTAWYLTIA+ +HGQ EGVTH+GP KLVLYFTGATNILYTFGGHAVTV
Sbjct: 121 IWSFLGLGMTTYTAWYLTIASFLHGQAEGVTHSGPTKLVLYFTGATNILYTFGGHAVTV 179