Jatropha Genome Database

JcCA0200941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0200941.10 + phase: 0 /partial
         (135 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G01850.2 | Symbols: SAM-2, MAT2 | SAM-2 (S-ADENOSYLMETHIONINE...   270   3e-73
AT4G01850.1 | Symbols: SAM-2, MAT2 | SAM-2 (S-ADENOSYLMETHIONINE...   270   3e-73
AT1G02500.2 | Symbols: SAM1, SAM-1, MAT1 | SAM1 (S-ADENOSYLMETHI...   265   5e-72
AT1G02500.1 | Symbols: SAM1, SAM-1, MAT1 | SAM1 (S-ADENOSYLMETHI...   265   5e-72
AT3G17390.1 | Symbols: MTO3, SAMS3, MAT4 | MTO3 (METHIONINE OVER...   263   3e-71
AT2G36880.2 | Symbols: MAT3 | MAT3 (methionine adenosyltransfera...   256   3e-69
AT2G36880.1 | Symbols: MAT3 | MAT3 (methionine adenosyltransfera...   256   3e-69

>AT4G01850.2 | Symbols: SAM-2, MAT2 | SAM-2 (S-ADENOSYLMETHIONINE
           SYNTHETASE 2); methionine adenosyltransferase |
           chr4:796298-797479 REVERSE
          Length = 393

 Score =  270 bits (689), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 128/135 (94%), Positives = 130/135 (96%)

Query: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNLVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQISDAVLDACL QDPDSKVACETCTKTN+VMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANIDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A IDYEKIVRDTCRSIGF SDDVGLDAD CKVLVNIEQQSPDIAQGVHGH TKRPE+IGA
Sbjct: 61  ATIDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGA 120

Query: 121 GDQGHMFGYATDETP 135
           GDQGHMFGYATDETP
Sbjct: 121 GDQGHMFGYATDETP 135


>AT4G01850.1 | Symbols: SAM-2, MAT2 | SAM-2 (S-ADENOSYLMETHIONINE
           SYNTHETASE 2); copper ion binding / methionine
           adenosyltransferase | chr4:796298-797479 REVERSE
          Length = 393

 Score =  270 bits (689), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 128/135 (94%), Positives = 130/135 (96%)

Query: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNLVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQISDAVLDACL QDPDSKVACETCTKTN+VMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANIDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A IDYEKIVRDTCRSIGF SDDVGLDAD CKVLVNIEQQSPDIAQGVHGH TKRPE+IGA
Sbjct: 61  ATIDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGA 120

Query: 121 GDQGHMFGYATDETP 135
           GDQGHMFGYATDETP
Sbjct: 121 GDQGHMFGYATDETP 135


>AT1G02500.2 | Symbols: SAM1, SAM-1, MAT1 | SAM1
           (S-ADENOSYLMETHIONINE SYNTHETASE 1); methionine
           adenosyltransferase | chr1:519037-520218 FORWARD
          Length = 393

 Score =  265 bits (678), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 126/135 (93%), Positives = 129/135 (95%)

Query: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNLVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQISDAVLDACL QDPDSKVACETCTKTN+VMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANIDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A +DYEKIVRDTCR+IGF SDDVGLDAD CKVLVNIEQQSPDIAQGVHGH TK PEEIGA
Sbjct: 61  ATVDYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGA 120

Query: 121 GDQGHMFGYATDETP 135
           GDQGHMFGYATDETP
Sbjct: 121 GDQGHMFGYATDETP 135


>AT1G02500.1 | Symbols: SAM1, SAM-1, MAT1 | SAM1
           (S-ADENOSYLMETHIONINE SYNTHETASE 1); methionine
           adenosyltransferase | chr1:519037-520218 FORWARD
          Length = 393

 Score =  265 bits (678), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 126/135 (93%), Positives = 129/135 (95%)

Query: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNLVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQISDAVLDACL QDPDSKVACETCTKTN+VMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANIDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A +DYEKIVRDTCR+IGF SDDVGLDAD CKVLVNIEQQSPDIAQGVHGH TK PEEIGA
Sbjct: 61  ATVDYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGA 120

Query: 121 GDQGHMFGYATDETP 135
           GDQGHMFGYATDETP
Sbjct: 121 GDQGHMFGYATDETP 135


>AT3G17390.1 | Symbols: MTO3, SAMS3, MAT4 | MTO3 (METHIONINE
           OVER-ACCUMULATOR 3); methionine adenosyltransferase |
           chr3:5952484-5953665 REVERSE
          Length = 393

 Score =  263 bits (671), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 121/135 (89%), Positives = 130/135 (96%)

Query: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNLVMVFGEITTK 60
           ME+FLFTSESVNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTN+VMVFGEITTK
Sbjct: 1   MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANIDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           AN+DYE+IVR TCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTK+PEE+GA
Sbjct: 61  ANVDYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVGA 120

Query: 121 GDQGHMFGYATDETP 135
           GDQGHMFGYATDETP
Sbjct: 121 GDQGHMFGYATDETP 135


>AT2G36880.2 | Symbols: MAT3 | MAT3 (methionine adenosyltransferase
           3); methionine adenosyltransferase |
           chr2:15479721-15480893 REVERSE
          Length = 390

 Score =  256 bits (654), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 120/135 (88%), Positives = 126/135 (93%)

Query: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNLVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTN+VMVFGEITT 
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTA 60

Query: 61  ANIDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A +DYEKIVR TCR IGF S DVGLDAD C VLVNIEQQSPDIAQGVHGHLTK+PE+IGA
Sbjct: 61  AKVDYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGA 120

Query: 121 GDQGHMFGYATDETP 135
           GDQGHMFGYATDETP
Sbjct: 121 GDQGHMFGYATDETP 135


>AT2G36880.1 | Symbols: MAT3 | MAT3 (methionine adenosyltransferase
           3); copper ion binding / methionine adenosyltransferase
           | chr2:15479721-15480893 REVERSE
          Length = 390

 Score =  256 bits (654), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 120/135 (88%), Positives = 126/135 (93%)

Query: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNLVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTN+VMVFGEITT 
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTA 60

Query: 61  ANIDYEKIVRDTCRSIGFTSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A +DYEKIVR TCR IGF S DVGLDAD C VLVNIEQQSPDIAQGVHGHLTK+PE+IGA
Sbjct: 61  AKVDYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGA 120

Query: 121 GDQGHMFGYATDETP 135
           GDQGHMFGYATDETP
Sbjct: 121 GDQGHMFGYATDETP 135