Jatropha Genome Database
- JcCA0198981.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0198981.10 - phase: 1 /partial
(164 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 8e-51
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-26
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 113 6e-26
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 112 1e-25
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 112 1e-25
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 110 3e-25
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 1e-24
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 108 1e-24
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-24
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 2e-24
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-24
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-24
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 8e-24
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-23
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-23
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-23
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-23
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 3e-23
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-23
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 103 4e-23
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 5e-23
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 6e-23
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-22
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-22
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-22
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-22
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-22
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 100 5e-22
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 100 5e-22
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 5e-22
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 5e-22
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 5e-22
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 7e-22
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-21
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-21
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-21
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-21
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-21
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 99 2e-21
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 2e-21
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-21
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 3e-21
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-21
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 97 4e-21
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-21
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 8e-21
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 8e-21
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 1e-20
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 1e-20
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 1e-20
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 1e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 1e-20
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 2e-20
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 95 2e-20
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 94 3e-20
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-20
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 4e-20
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 4e-20
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 93 6e-20
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 7e-20
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 8e-20
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 93 8e-20
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-19
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-19
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 2e-19
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 2e-19
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-19
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 91 3e-19
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 4e-19
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 5e-19
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 6e-19
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 7e-19
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 90 8e-19
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-18
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 89 1e-18
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-18
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 2e-18
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 2e-18
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-18
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 88 2e-18
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-18
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 88 2e-18
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 3e-18
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-18
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-18
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-18
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-18
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-18
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 87 4e-18
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 87 5e-18
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 7e-18
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-18
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 8e-18
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 8e-18
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 9e-18
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-17
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-17
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-17
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-17
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-17
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 84 4e-17
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 5e-17
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 6e-17
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 6e-17
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 84 6e-17
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 6e-17
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 7e-17
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 7e-17
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 7e-17
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 83 7e-17
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 8e-17
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 9e-17
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 1e-16
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-16
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-16
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 82 2e-16
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 82 2e-16
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-16
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-16
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-16
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-16
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-16
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-16
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 4e-16
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-16
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 80 4e-16
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-16
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 79 1e-15
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 79 1e-15
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-15
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 3e-15
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-15
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 77 5e-15
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 7e-15
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 9e-15
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 1e-14
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-14
AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-14
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 3e-14
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 74 3e-14
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-14
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 74 4e-14
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 74 6e-14
AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 6e-14
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 74 6e-14
AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 6e-14
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 8e-14
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 8e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 73 9e-14
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-13
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 72 2e-13
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-13
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-13
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 4e-13
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 7e-13
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 9e-13
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 69 9e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 1e-12
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-12
AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-12
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-12
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-12
AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 3e-12
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 3e-12
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 67 4e-12
AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat... 67 5e-12
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-12
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-12
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 6e-12
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 6e-12
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 7e-12
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 1e-11
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-11
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 2e-11
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-11
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-11
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 65 3e-11
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 3e-11
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-11
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-11
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-11
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 64 5e-11
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 5e-11
AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 6e-11
AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-11
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 8e-11
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 62 1e-10
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 62 2e-10
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-10
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-10
AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-10
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-10
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 62 2e-10
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-10
AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 4e-10
AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-10
AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-10
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 7e-10
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 9e-10
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 60 9e-10
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-09
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 2e-09
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 3e-09
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 57 4e-09
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-09
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-09
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-09
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 57 4e-09
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-09
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-09
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 6e-09
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 6e-09
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 7e-09
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 1e-08
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 1e-08
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 55 1e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-08
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 55 2e-08
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-08
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-08
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-08
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 55 3e-08
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 3e-08
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-08
AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-08
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-08
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 54 5e-08
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-08
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-08
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-08
AT1G06270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-08
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-08
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 8e-08
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 9e-08
AT5G66631.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 9e-08
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 1e-07
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 1e-07
AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 1e-07
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 2e-07
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 52 2e-07
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-07
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-07
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-07
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-07
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-07
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 51 4e-07
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 4e-07
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 4e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 4e-07
AT1G30610.1 | Symbols: emb2279 | emb2279 (embryo defective 2279)... 50 4e-07
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-07
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-07
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-07
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 6e-07
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 6e-07
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 6e-07
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 7e-07
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 7e-07
AT3G46870.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 8e-07
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 9e-07
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 9e-07
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 9e-07
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 9e-07
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 1e-06
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 49 1e-06
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 1e-06
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 49 1e-06
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 1e-06
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 1e-06
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 49 2e-06
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 49 2e-06
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 2e-06
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 48 3e-06
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 3e-06
AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 3e-06
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 48 3e-06
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 3e-06
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 3e-06
AT5G36300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 48 3e-06
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 3e-06
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 3e-06
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 3e-06
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 48 4e-06
AT5G27300.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 47 4e-06
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 4e-06
AT5G27300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 47 4e-06
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 5e-06
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 5e-06
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 5e-06
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 5e-06
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 47 6e-06
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 7e-06
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 7e-06
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 7e-06
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 7e-06
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 7e-06
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 46 1e-05
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 196 bits (497), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 124/156 (79%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ +VVT+T L++AFLREG+S +AKKLLDQMT++G+SPDRIFYTTI+ HLCKSG + A
Sbjct: 355 GMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +F DM+E I PD IS N+LI+G C+S RV+EA++L+E+M+ + PDE+T+ II G
Sbjct: 415 YGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGG 474
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISAN 157
LI KKLS A +VW QMM+KGFTLDR S+ LI A+
Sbjct: 475 LIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKAS 510
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVV++TIL+ R G A ++ + M + G+SPD ++ LC + K+ LA
Sbjct: 144 GREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Query: 62 HTIFCDMVEQG-IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ + + ++ + + NALI+GFCK+ R+ +A L M G PD VTYN+++
Sbjct: 204 YEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLN 263
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L A V +M+ G LD + L+ + R
Sbjct: 264 YYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
+ + +RE ++A+ + M MG S Y+ I LCK K L + DM
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
G PD+ + N ++ C+ +V A+Q + M RG PD V+Y ++I GL K++
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 130 VASRVWGQMMEKGFTLDRANSEILI 154
A +W M+ G + D L+
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALV 191
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT+ +L+ + A+ ++ +M + GI D Y ++ C+
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +E DV+S + LI FC++ +A +L+EEM+ +G + VTY +I+
Sbjct: 310 YNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKA 369
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDR 147
+ E SVA ++ QM E G + DR
Sbjct: 370 FLREGNSSVAKKLLDQMTELGLSPDR 395
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA-HTIFCD 67
T++ + + D+ LL M +G PD + + LC+ K+G A T FC
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFC- 139
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
MV++G PDV+S LING ++ +V++A++++ M G PD ++ GL +K
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 128 LSVA 131
+ +A
Sbjct: 200 VDLA 203
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Query: 14 VEAFLREGSSDIAKKLLDQMTKMGISPDRIF---YTTIIGHLCKSGKIGLAHTIFCDMVE 70
+ ++ G D A ++ D+M S R+F Y IG L + + LA I+ DM
Sbjct: 16 IANLVKSGMIDNAVQVFDEMRH---SSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKP 72
Query: 71 QGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSV 130
G + + I+G CK + L +M++ G PD +N+ + L E K+
Sbjct: 73 MGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGF 132
Query: 131 ASRVWGQMMEKGFTLDRANSEILISANSRDAAST 164
A + + M+++G D + ILI+ R T
Sbjct: 133 AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 90/140 (64%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I+PDVVTF+ L++ F++EG AK+L ++M GI+PD I Y ++I CK + A+
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F MV +G PD+++ + LIN +CK+ RV + M+L+ E+ S+G P+ +TYN ++ G
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 123 IVEKKLSVASRVWGQMMEKG 142
KL+ A ++ +M+ +G
Sbjct: 431 CQSGKLNAAKELFQEMVSRG 450
Score = 100 bits (248), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 90/154 (58%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I VV ++I++++ ++GS D A L ++M GI D + Y+++IG LC GK
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M+ + I PDV++ +ALI+ F K ++ EA +LY EM +RG PD +TYN +I G
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
E L A++++ M+ KG D ILI++
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 97/191 (50%), Gaps = 35/191 (18%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT++IL+ ++ + D +L +++ G+ P+ I Y T++ C+SGK+ A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS---------------- 105
+F +MV +G+PP V++ L++G C + +++A++++E+MQ
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 106 -------------------RGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
+G PD VTYN++I GL + LS A ++ +M E G T D
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Query: 147 RANSEILISAN 157
ILI A+
Sbjct: 560 DFTYNILIRAH 570
Score = 95.9 bits (237), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 83/144 (57%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD +T+ L++ F +E A ++ D M G PD + Y+ +I CK+ ++
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F ++ +G+ P+ I+ N L+ GFC+S +++ A +L++EM SRG P VTY +++ G
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 122 LIVEKKLSVASRVWGQMMEKGFTL 145
L +L+ A ++ +M + TL
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTL 488
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 82/142 (57%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI DVVT++ L+ +G D K+L +M I PD + ++ +I K GK+ A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M+ +GI PD I+ N+LI+GFCK + EA Q+++ M S+G PD VTY+++I
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
K++ R++ ++ KG
Sbjct: 395 YCKAKRVDDGMRLFREISSKGL 416
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 86/153 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P VVT+ IL++ G + A ++ ++M K ++ Y II +C + K+ A
Sbjct: 450 GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++FC + ++G+ PDV++ N +I G CK +SEA L+ +M+ G PD+ TYN++IR
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ L + + +M GF+ D + +++I
Sbjct: 570 HLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NGI D+ T TI++ + R+ A +L + K+G PD I ++T++ C G++
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + MVE PD+++ + LING C RVSEA+ L + M G PDEVTY ++
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
L ++A ++ +M E+ I+I + +D +
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD +TF+ LV F EG A L+D+M +M PD + +T+I LC G++ A
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G PD ++ ++N CKS + A+ L+ +M+ R V Y+++I
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L + A ++ +M KG D LI D
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+VT + L+ +G A L+D+M + G PD + Y ++ LCKSG LA +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M E+ I V+ + +I+ CK +A+ L+ EM+ +G D VTY+ +I GL
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ K +++ +M+ + D LI
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VT+ ++ + G+S +A L +M + I + Y+ +I LCK G A
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++F +M +GI DV++ ++LI G C + + ++ EM R PD VT++ +I
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ E KL A ++ +M+ +G D LI
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP + F L A R D+ M GI D T +I C+ K+ A +
Sbjct: 67 LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 126
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ + G PD I+ + L+NGFC RVSEA+ L + M PD VT + +I GL
Sbjct: 127 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186
Query: 124 VEKKLSVASRVWGQMMEKGFTLD 146
++ ++S A + +M+E GF D
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPD 209
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 113 bits (282), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 96/154 (62%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+VVTF++L+++F++EG A +LL +M + GI+P+ I Y ++I CK ++ A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M+ +G PD+++ N LING+CK+ R+ + ++L+ EM RG + VTYN +++G
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
KL VA +++ +M+ + D + +IL+
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 81/141 (57%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G D++T+ L+ F G D KLL M K ISP+ + ++ +I K GK+ A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M+++GI P+ I+ N+LI+GFCK R+ EA+Q+ + M S+G PD +T+N++I G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
++ ++ +M +G
Sbjct: 413 YCKANRIDDGLELFREMSLRG 433
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D V ++I+++ ++GS D A L ++M G D I Y T+IG C +G+ +
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
DM+++ I P+V++ + LI+ F K ++ EA QL +EM RG P+ +TYN +I G E
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+L A ++ M+ KG D ILI+
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 78/141 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ VT+ ++ + G + +A +LL +M + I D + Y+ II LCK G + A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +G D+I+ N LI GFC + R + +L +M R P+ VT++++I
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ E KL A ++ +MM++G
Sbjct: 343 FVKEGKLREADQLLKEMMQRG 363
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD V F L+ E A +L+D+M +MG P I T++ LC +GK+ A
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G P+ ++ ++N CKS + + AM+L +M+ R D V Y++II G
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L + L A ++ +M KGF D
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKAD 297
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI + T +I++ F R A + ++ K+G PD + + T++ LC ++ A
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G P +I+ N L+NG C + +VS+A+ L + M G P+EVTY ++
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
+ + ++A + +M E+ LD I+I +D +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 84/158 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD++TF IL+ + + D +L +M+ G+ + + Y T++ C+SGK+ +A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +MV + + PD++S L++G C + + +A++++ +++ D Y +II G
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ K+ A ++ + KG LD I+IS R
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+ LV+ F + G ++AKKL +M + PD + Y ++ LC +G++ A
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF + + + D+ +I+G C + +V +A L+ + +G D YN++I
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISE 552
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAST 164
L + LS A ++ +M E+G D ILI A+ D +T
Sbjct: 553 LCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDAT 595
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P ++T LV G A L+D+M + G P+ + Y ++ +CKSG+ LA
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E+ I D + + +I+G CK + A L+ EM+ +G D +TYN +I G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ +++ M+++ + + +LI +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP V+ F L A + ++ L QM GI+ + +I C+ K+ A +
Sbjct: 85 LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFS 144
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+++ G PD + N L+NG C RVSEA++L + M G P +T N ++ GL
Sbjct: 145 TMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC 204
Query: 124 VEKKLSVASRVWGQMMEKGF 143
+ K+S A + +M+E GF
Sbjct: 205 LNGKVSDAVVLIDRMVETGF 224
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+ + I++ D A L + G+ D Y +I LC+ + A +F
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
M E+G PD ++ N LI + A +L EEM+S G D T ++I L
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%)
Query: 23 SDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNA 82
+D A L M + P I + + + K+ + L + M +GI + + +
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 83 LINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
+IN FC+ ++S A ++ G PD V +N ++ GL +E ++S A + +M+E G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 82/136 (60%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I+P+V+TFT +++ F++EG A KL ++MT+ + PD Y ++I LC G++ A
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ MV +G PDV++ N LINGFCKS RV E +L+ EM RG D +TYN II+G
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 123 IVEKKLSVASRVWGQM 138
+ A ++ +M
Sbjct: 360 FQAGRPDAAQEIFSRM 375
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVV + +++ + G + A +L D+M + G+ D + Y +++ LC SG+ A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DMV + I P+VI+ A+I+ F K + SEAM+LYEEM R PD TYN +I G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + ++ A ++ M+ KG D LI+
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ D VT+ LV G A +L+ M I P+ I +T +I K GK
Sbjct: 203 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 262
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ +M + + PDV + N+LING C RV EA Q+ + M ++G PD VTYN +I
Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI----SANSRDAA 162
G K++ ++++ +M ++G D +I A DAA
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV T+ L+ G D AK++LD M G PD + Y T+I CKS ++ +
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M ++G+ D I+ N +I G+ ++ R A +++ M SR P+ TY++++ GL +
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCM 393
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILI 154
++ A ++ M + LD I+I
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVI 423
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP +V F+ ++ + + D+ L M GI D Y +I LC+ + +A +
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M++ G PDV++ ++LINGFC+ RV +A+ L +M+ G PD V YN II G
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
++ A ++ +M G D L++
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G LPDVVT+ L+ F + D KL +M + G+ D I Y TII ++G+ A
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF M + P++ + + L+ G C ++RV +A+ L+E MQ D TYN++I G
Sbjct: 369 QEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ + A ++ + KG D + +IS R
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 75/140 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI D+ ++ I++ R IA ++ +M K G PD + +++I C+ ++ A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E G PDV+ N +I+G CK V++A++L++ M+ G D VTYN ++ G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 122 LIVEKKLSVASRVWGQMMEK 141
L + S A+R+ M+ +
Sbjct: 219 LCCSGRWSDAARLMRDMVMR 238
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P++ T++IL+ + A L + M K I D Y +I +CK G + A +
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYP 110
F + +G+ PDV+S +I+GFC+ + ++ LY +MQ G P
Sbjct: 439 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 90/152 (59%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+V+T++ L++AF++ G AK+L ++M +M I PD + Y+++I LC +I A+
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F MV +G DV+S N LINGFCK+ RV + M+L+ EM RG + VTYN +I+G
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ A + QM G + D IL+
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 82/143 (57%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI D+ TF I++ F +A +L +M K+G PDR+ +++ C+ ++ A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ MVE G PD+++ NA+I+ CK+ RV++A ++E++ +G P+ VTY ++ G
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 122 LIVEKKLSVASRVWGQMMEKGFT 144
L + S A+R+ M++K T
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKIT 257
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+ L++ F + G D A++ QM GISPD Y ++G LC +G++ A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF DM ++ + D+++ +I G CK+ +V EA L+ + +G PD VTY ++ G
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
L + L ++ +M ++G
Sbjct: 480 LCTKGLLHEVEALYTKMKQEGL 501
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 87/155 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+V + ++++ + + A ++ + GI P+ + YT ++ LC S + A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DM+++ I P+VI+ +AL++ F K+ +V EA +L+EEM PD VTY+ +I G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + ++ A++++ M+ KG D + LI+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VT LV F R A L+D+M ++G PD + Y II LCK+ ++ A
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F ++ +GI P+V++ AL+NG C S R S+A +L +M + P+ +TY+ ++
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 122 LIVEKKLSVASRVWGQMME 140
+ K+ A ++ +M+
Sbjct: 270 FVKNGKVLEAKELFEEMVR 288
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P +V F L+ A ++ D+ L +M +GI D + +I C ++ LA +
Sbjct: 82 FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
I M++ G PD ++ +L+NGFC+ RVS+A+ L ++M G PD V YN II L
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 124 VEKKLSVASRVWGQMMEKG 142
K+++ A + ++ KG
Sbjct: 202 KTKRVNDAFDFFKEIERKG 220
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G L DVV++ L+ F + + KL +M++ G+ + + Y T+I ++G + A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F M GI PD+ + N L+ G C + + +A+ ++E+MQ R D VTY +IRG
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ K+ A ++ + KG D
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPD 469
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+VT++ L+ D A ++ D M G D + Y T+I CK+ ++ +
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M ++G+ + ++ N LI GF ++ V +A + + +M G PD TYN+++ GL
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 125 EKKLSVASRVWGQMMEKGFTLD 146
+L A ++ M ++ LD
Sbjct: 413 NGELEKALVIFEDMQKREMDLD 434
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD+ T+ IL+ G + A + + M K + D + YTT+I +CK+GK+ A
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY---NLI 118
++FC + +G+ PD+++ +++G C + E LY +M+ G ++ T ++
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDIT 514
Query: 119 IRGLIVEKKLS 129
+ +++K LS
Sbjct: 515 LSAELIKKMLS 525
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
L + LR+ + A L M K P + + ++ + K K + ++ M G
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVAS 132
I D+ + N +IN FC F+VS A+ + +M G PD VT ++ G ++S A
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 133 RVWGQMMEKGFTLD 146
+ +M+E G+ D
Sbjct: 176 SLVDKMVEIGYKPD 189
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 89/152 (58%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+VVTF+ L++AF++EG A+KL D+M K I PD Y+++I C ++ A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F M+ + P+V++ N LI GFCK+ RV E M+L+ EM RG + VTYN +I+GL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+A +++ +M+ G D IL+
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 85/155 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+VVT+ L+ G A +LL M + I+P+ + ++ +I K GK+ A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M+++ I PD+ + ++LINGFC R+ EA ++E M S+ +P+ VTYN +I+G
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
K++ ++ +M ++G + LI
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 85/155 (54%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD++T++IL++ + G + A + + + K + PD Y +I +CK+GK+
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+FC + +G+ P+VI +I+GFC+ EA L+ EM+ G P+ TYN +IR
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
+ + + ++ + +M GF D + ++I+
Sbjct: 579 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 76/152 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+ VTF L+ + A L+D+M G PD Y T++ LCK G I LA ++
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M + I DV+ +I+ C V++A+ L+ EM ++G P+ VTYN +IR L
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ S ASR+ M+E+ + LI A
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+ T+ +V + G D+A LL +M K I D + YTTII LC + A
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +GI P+V++ N+LI C R S+A +L +M R P+ VT++ +I
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ E KL A +++ +M+++ D
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPD 359
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 77/139 (55%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I DVV +T +++A + + A L +M GI P+ + Y ++I LC G+ A
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM+E+ I P+V++ +ALI+ F K ++ EA +LY+EM R PD TY+ +I G
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 123 IVEKKLSVASRVWGQMMEK 141
+ +L A ++ M+ K
Sbjct: 371 CMHDRLDEAKHMFELMISK 389
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 81/160 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+ L++ + G D+A+K+ +M G+ PD I Y+ ++ LCK GK+ A
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F + + + PD+ + N +I G CK+ +V + L+ + +G P+ + Y +I G
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ A ++ +M E G + LI A RD
Sbjct: 545 FCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 71/119 (59%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P+VVT+ L++ F + + +L +M++ G+ + + Y T+I L ++G +A
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
IF MV G+PPD+I+ + L++G CK ++ +A+ ++E +Q PD TYN++I G+
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 76/139 (54%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP +V F L+ A + D+ L ++M + IS D Y +I C+ ++ LA
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M++ G PD+++ ++L+NG+C R+SEA+ L ++M P+ VT+N +I GL
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 124 VEKKLSVASRVWGQMMEKG 142
+ K S A + +M+ +G
Sbjct: 197 LHNKASEAVALIDRMVARG 215
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+ ++ IL+ F R +A +L +M K+G PD + ++++ C +I A +
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M P+ ++ N LI+G + SEA+ L + M +RG PD TY ++ GL
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 126 KKLSVASRVWGQMMEKG 142
+ +A + + MEKG
Sbjct: 234 GDIDLALSLLKK-MEKG 249
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+ T+ I++E + G + L ++ G+ P+ I YTT+I C+ G A +
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
F +M E G P+ + N LI + + + +L +EM+S G D T +++I L
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 89/139 (64%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+VVTF++L+++F++EG A++L +M GI+PD I YT++I CK + A+
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ MV +G P++ + N LING+CK+ R+ + ++L+ +M RG D VTYN +I+G
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 123 IVEKKLSVASRVWGQMMEK 141
KL+VA ++ +M+ +
Sbjct: 449 CELGKLNVAKELFQEMVSR 467
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 80/155 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ +TF+ L+ EG A +L+D+M +MG PD I T++ LC SGK A
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G P+ ++ ++N CKS + + AM+L +M+ R D V Y++II G
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L L A ++ +M KG T + ILI
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI +++T+ IL+ F G D KLL M K I+P+ + ++ +I K GK+ A
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M+ +GI PD I+ +LI+GFCK + +A Q+ + M S+G P+ T+N++I G
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
++ ++ +M +G D LI
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D V ++I+++ + GS D A L ++M GI+ + I Y +IG C +G+ +
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
DM+++ I P+V++ + LI+ F K ++ EA +L++EM RG PD +TY +I G E
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L A+++ M+ KG + ILI+
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD +T+T L++ F +E D A +++D M G P+ + +I CK+ +I
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M +G+ D ++ N LI GFC+ +++ A +L++EM SR P+ VTY +++ G
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 122 LI----VEKKLSVASRVWGQMME 140
L EK L + ++ ME
Sbjct: 483 LCDNGESEKALEIFEKIEKSKME 505
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI ++ T +I++ F R +A + ++ K+G P+ I ++T+I LC G++ A
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G PD+I+ N L+NG C S + +EAM L ++M G P+ VTY ++
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ + ++A + +M E+ LD I+I
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 84/150 (56%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P++VT+ IL++ G S+ A ++ +++ K + D Y II +C + K+ A +
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
FC + +G+ P V + N +I G CK +SEA L+ +M+ G PD TYN++IR +
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 590
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ + + ++ ++ GF++D + +++I
Sbjct: 591 DGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ VT+ ++ + G + +A +LL +M + I D + Y+ II LCK G + A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +GI ++I+ N LI GFC + R + +L +M R P+ VT++++I
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ E KL A + +M+ +G D
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPD 367
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ D VT+ L++ F G ++AK+L +M + P+ + Y ++ LC +G+ A
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF + + + D+ N +I+G C + +V +A L+ + +G P TYN++I G
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAST 164
L + LS A ++ +M E G D ILI A+ D +T
Sbjct: 553 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDAT 595
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD++T LV G A L+D+M + G P+ + Y ++ +CKSG+ LA
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E+ I D + + +I+G CK + A L+ EM+ +G + +TYN++I G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ +++ M+++ + +LI +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP V+ F+ L A + D+ L QM GI+ + + +I C+ K+ LA +
Sbjct: 85 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS 144
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+++ G P+ I+ + LING C RVSEA++L + M G PD +T N ++ GL
Sbjct: 145 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 204
Query: 124 VEKKLSVASRVWGQMMEKG 142
+ K + A + +M+E G
Sbjct: 205 LSGKEAEAMLLIDKMVEYG 223
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 89/161 (55%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P VVT+ L+ G + A +L+ M + G+SPD + Y+T++ C+S +
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +MVE+GI PD I+ ++LI GFC+ R EA LYEEM G PDE TY +I
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+E L A ++ +M+EKG D +LI+ ++ +
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 91/155 (58%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+ T+T LV+ F ++G + A ++L +M G SP + Y +I C +GK+ A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DM E+G+ PDV+S + +++GFC+S+ V EA+++ EM +G PD +TY+ +I+G
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+++ A ++ +M+ G D LI+A
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 87/154 (56%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ P V+T+T L+ + + G+ + A + LDQM G+ P+ YTT++ + G +
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ + +M + G P V++ NALING C + ++ +A+ + E+M+ +G PD V+Y+ ++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
G + A RV +M+EKG D LI
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 73/140 (52%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+V T+ IL+ F G+ D+A L D+M G P+ + Y T+I CK KI +
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M +G+ P++IS N +ING C+ R+ E + EM RG DEVTYN +I+G
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 125 EKKLSVASRVWGQMMEKGFT 144
E A + +M+ G T
Sbjct: 323 EGNFHQALVMHAEMLRHGLT 342
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 78/133 (58%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PDVV+++ ++ F R D A ++ +M + GI PD I Y+++I C+ + A
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M+ G+PPD + ALIN +C + +A+QL+ EM +G PD VTY+++I G
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 122 LIVEKKLSVASRV 134
L + + A R+
Sbjct: 565 LNKQSRTREAKRL 577
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSS-DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG 59
+G +P V+++ +++A +R + A+ + +M + +SP+ Y +I C +G I
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID 222
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+A T+F M +G P+V++ N LI+G+CK ++ + +L M +G P+ ++YN++I
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
GL E ++ S V +M +G++LD LI ++
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG 324
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 79/143 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+++++ +++ REG +L +M + G S D + Y T+I CK G A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M+ G+ P VI+ +LI+ CK+ ++ AM+ ++M+ RG P+E TY ++ G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 122 LIVEKKLSVASRVWGQMMEKGFT 144
+ ++ A RV +M + GF+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFS 412
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD +T++ L++ F + + A L ++M ++G+ PD YT +I C G + A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNL---- 117
+ +MVE+G+ PDV++ + LING K R EA +L ++ P +VTY+
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 118 -----------IIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+I+G ++ ++ A +V+ M+ K D I+I + R
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D VT+ L++ + +EG+ A + +M + G++P I YT++I +CK+G + A
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M +G+ P+ + L++GF + ++EA ++ EM G P VTYN +I G V
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
K+ A V M EKG + D + ++S R
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G LP+VVT+ L++ + + D KLL M G+ P+ I Y +I LC+ G++
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M +G D ++ N LI G+CK +A+ ++ EM G P +TY +I
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
+ ++ A QM +G
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGL 376
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 15/175 (8%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGH---------- 51
G+LPDVVT+++L+ ++ + AK+LL ++ P + Y T+I +
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV 609
Query: 52 -----LCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR 106
C G + A +F M+ + PD + N +I+G C++ + +A LY+EM
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 107 GPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
G VT +++ L E K++ + V ++ + +++L+ N R+
Sbjct: 670 GFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREG 724
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 83/140 (59%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDV TF+ L++AF++EG A+KL D+M K I P + Y+++I C ++ A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F MV + PDV++ N LI GFCK RV E M+++ EM RG + VTYN++I+GL
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 123 IVEKKLSVASRVWGQMMEKG 142
+A ++ +M+ G
Sbjct: 442 FQAGDCDMAQEIFKEMVSDG 461
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 87/155 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+VVT++ L+ G A +LL M + I+PD ++ +I K GK+ A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +MV++ I P +++ ++LINGFC R+ EA Q++E M S+ +PD VTYN +I+G
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
K++ V+ +M ++G + ILI
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ VTF L+ + A L+D+M G PD + Y ++ LCK G LA
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M + + P V+ N +I+G CK + +A+ L++EM+++G P+ VTY+ +I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + S ASR+ M+E+ D LI A
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 84/153 (54%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P ++ F+ L+ A + D+ L +QM +GI + Y+ +I C+ ++ LA
Sbjct: 78 FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 137
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M++ G P++++ ++L+NG+C S R+SEA+ L ++M G P+ VT+N +I GL
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ K S A + +M+ KG D ++++
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 82/160 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+ IL++ + G D+A+++ +M G+ P+ + Y T++ LCK+GK+ A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F + + P + + N +I G CK+ +V + L+ + +G PD V YN +I G
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ A ++ +M E G + LI A RD
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 81/140 (57%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT+ ++V + G +D+A LL++M + + P + Y TII LCK + A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +GI P+V++ ++LI+ C R S+A +L +M R PD T++ +I
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 122 LIVEKKLSVASRVWGQMMEK 141
+ E KL A +++ +M+++
Sbjct: 336 FVKEGKLVEAEKLYDEMVKR 355
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 79/146 (54%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ P+++T+ L++ + G + A + + + + + P Y +I +CK+GK+
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+FC++ +G+ PDV++ N +I+GFC+ EA L++EM+ G P+ YN +IR
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
+ + ++ + +M GF D
Sbjct: 580 ARLRDGDREASAELIKEMRSCGFAGD 605
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 84/159 (52%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
PDVVT+ L++ F + + ++ +M++ G+ + + Y +I L ++G +A
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
IF +MV G+PP++++ N L++G CK+ ++ +AM ++E +Q P TYN++I G+
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
K+ ++ + KG D +IS R +
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 75/137 (54%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P V+ + +++ + D A L +M GI P+ + Y+++I LC G+ A +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
DM+E+ I PDV + +ALI+ F K ++ EA +LY+EM R P VTY+ +I G +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 125 EKKLSVASRVWGQMMEK 141
+L A +++ M+ K
Sbjct: 374 HDRLDEAKQMFEFMVSK 390
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI + T++IL+ F R +A +L +M K+G P+ + ++++ C S +I A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M G P+ ++ N LI+G + SEAM L + M ++G PD VTY +++ G
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L +A + + ME+G
Sbjct: 231 LCKRGDTDLAFNLLNK-MEQG 250
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P++VT + L+ + A L+DQM G P+ + + T+I L K A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MV +G PD+++ ++NG CK A L +M+ P + YN II G
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
L K + A ++ +M KG + LIS
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P + T+ I++E + G + L ++ G+ PD + Y T+I C+ G A +
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
F +M E G P+ N LI + + +L +EM+S G D T L+ L
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P++VTF L++AF++EG A+KL D M K I PD Y +++ C ++ A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F MV + PDV++ N LI GFCKS RV + +L+ EM RG D VTY +I+GL
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A +V+ QM+ G D IL+
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+VVT++ L+ G A +LL M + I+P+ + + +I K GK A
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ DM+++ I PD+ + N+L+NGFC R+ +A Q++E M S+ +PD VTYN +I+G
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
K++ + ++ +M +G D LI D
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 82/146 (56%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD++T++IL++ G + A ++ D M K I D YTT+I +CK+GK+
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+FC + +G+ P+V++ N +I+G C + EA L ++M+ GP P+ TYN +IR
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
+ + + ++ + +M F D
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGD 609
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ D VT+T L++ +G D A+K+ QM G+ PD + Y+ ++ LC +GK+ A
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M + I D+ +I G CK+ +V + L+ + +G P+ VTYN +I G
Sbjct: 490 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L ++ L A + +M E G + LI A+ RD
Sbjct: 550 LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD +TFT L+ + A L+D+M + G P+ + Y ++ LCK G LA
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M I DV+ N +I+ CK V +A+ L++EM+++G P+ VTY+ +I
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + S AS++ M+EK + LI A
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 77/139 (55%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I DVV F ++++ + D A L +M GI P+ + Y+++I LC G+ A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM+E+ I P++++ NALI+ F K + EA +LY++M R PD TYN ++ G
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 123 IVEKKLSVASRVWGQMMEK 141
+ +L A +++ M+ K
Sbjct: 376 CMHDRLDKAKQMFEFMVSK 394
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 80/145 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P++VT+ ++V + G +D+A LL++M I D + + TII LCK + A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +GI P+V++ ++LI+ C R S+A QL +M + P+ VT+N +I
Sbjct: 280 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ E K A +++ M+++ D
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPD 364
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 75/139 (53%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP +V F L+ A + D+ L ++M ++ I Y +I C+ +I LA
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M++ G P +++ ++L+NG+C R+S+A+ L ++M G PD +T+ +I GL
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 124 VEKKLSVASRVWGQMMEKG 142
+ K S A + +M+++G
Sbjct: 202 LHNKASEAVALVDRMVQRG 220
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PD+ T+ LV F D AK++ + M PD + Y T+I CKS ++
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F +M +G+ D ++ LI G A +++++M S G PD +TY++++ GL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 123 IVEKKLSVASRVWGQMMEKGFTLD 146
KL A V+ M + LD
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLD 504
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I+ + T+ IL+ F R +A LL +M K+G P + ++++ C +I A
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ MVE G PD I+ LI+G + SEA+ L + M RG P+ VTY +++ GL
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 123 IVEKKLSVASRVWGQM 138
+A + +M
Sbjct: 236 CKRGDTDLALNLLNKM 251
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 88/150 (58%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+V+ FT L++ F++EG+ A+ L +M + + P+ Y ++I C G +G A +
Sbjct: 781 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 840
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F MV +G PDV++ N LI GFCKS RV + M+L+ EM +G D TYN +I G
Sbjct: 841 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 900
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILI 154
KL+VA +V+ +M++ G + D IL+
Sbjct: 901 AGKLNVAQKVFNRMVDCGVSPDIVTYNILL 930
Score = 103 bits (256), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 86/154 (55%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDVVTFT L++ F+++G+ D A++L +M + + P+ + Y +II LC G++ A
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
F M +G P+V++ N LI+GFCK V E M+L++ M G D TYN +I G
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
KL VA ++ M+ + T D IL+
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 86/156 (55%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G P+VV + L++ + G +IA +LL++M K G+ D + Y T++ LC SG+
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + DM+++ I PDV++ ALI+ F K + EA +LY+EM P+ VTYN II
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
GL + +L A + + M KG + LIS
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVVT+ L+ F + + KL +MT G+ D Y T+I C++GK+ +A
Sbjct: 848 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 907
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F MV+ G+ PD+++ N L++ C + ++ +A+ + E++Q D +TYN+II+G
Sbjct: 908 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 967
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L KL A ++ + KG D +IS R
Sbjct: 968 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 1005
Score = 93.2 bits (230), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI D VT+ L+ G A +LL M K I P+ IF+T +I K G + A
Sbjct: 743 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 802
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M+ + + P+V + N+LINGFC + +A +++ M S+G +PD VTYN +I G
Sbjct: 803 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 862
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
K++ +++ +M +G D LI
Sbjct: 863 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 897
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI D+ +FTIL+ F R A +L +M K+G P + + +++ C +IG A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ MV+ G P+V+ N LI+G CK+ ++ A++L EM+ +G D VTYN ++ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L + S A+R+ MM++ D LI
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 81/155 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ DVVT+ L+ G A ++L M K I+PD + +T +I K G + A
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M++ + P+ ++ N++ING C R+ +A + ++ M S+G +P+ VTYN +I G
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ + +++ +M +GF D LI
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
++P+V T+ L+ F G AK + D M G PD + Y T+I CKS ++
Sbjct: 814 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 873
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+FC+M QG+ D + N LI+G+C++ +++ A +++ M G PD VTYN+++ L
Sbjct: 874 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 933
Query: 123 IVEKKLSVA 131
K+ A
Sbjct: 934 CNNGKIEKA 942
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 78/142 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ D T+ L+ + + G ++A+K+ ++M G+SPD + Y ++ LC +GKI A
Sbjct: 883 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 942
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ D+ + + D+I+ N +I G C++ ++ EA L+ + +G PD + Y +I G
Sbjct: 943 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 1002
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
L + A ++ +M E GF
Sbjct: 1003 LCRKGLQREADKLCRRMKEDGF 1024
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 79/153 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+VVT+ L+ F + D KL +M+ G + D Y T+I C+ GK+ +A
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IFC MV + + PD+I+ L++G C + + A+ +++M+ Y V YN++I G
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L K+ A ++ ++ +G D I+I
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P +VTF L+ F A L+ M K G P+ + Y T+I LCK+G++ +A
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M ++G+ DV++ N L+ G C S R S+A ++ +M R PD VT+ +I
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 122 LIVEKKLSVASRVWGQMME 140
+ + L A ++ +M++
Sbjct: 256 FVKQGNLDEAQELYKEMIQ 274
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
+P +V FT ++ + DI L +M +GIS D +T +I C+ ++ LA
Sbjct: 605 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 664
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M++ G P +++ +L+NGFC+ R EA+ L + M G P+ V YN +I GL
Sbjct: 665 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 724
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAST 164
+ L+ A V+ M +KG D LIS S T
Sbjct: 725 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 765
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +P+VV + ++ + + A ++ M K GI D + Y T+I L SG+ A
Sbjct: 708 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 767
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DMV++ I P+VI ALI+ F K + EA LY+EM R P+ TYN +I G
Sbjct: 768 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 827
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ L A ++ M+ KG D LI+
Sbjct: 828 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 862
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI D+ +FTIL+ F R +A LL +M K+G P + +++ C+ + A
Sbjct: 638 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 697
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ M G P+V+ N +ING CK+ ++ A++++ M+ +G D VTYN +I G
Sbjct: 698 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 757
Query: 122 LIVEKKLSVASRVWGQMMEK 141
L + + A+R+ M+++
Sbjct: 758 LSNSGRWTDAARLLRDMVKR 777
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP +V FT L+ A + +M GIS D +T +I C+ ++ A +
Sbjct: 68 LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALS 127
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M++ G P +++ +L++GFC R+ +A L M G P+ V YN +I GL
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+L++A + +M +KG D L++
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 62/119 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD+VT+ IL++ G + A +++ + K + D I Y II LC++ K+ A
Sbjct: 918 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 977
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+F + +G+ PD I+ +I+G C+ EA +L M+ G P E Y+ +R
Sbjct: 978 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 1036
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 92/154 (59%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDVV F+ L++ F++EG A++L +M + GISPD + YT++I CK ++ A+
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ MV +G P++ + N LING+CK+ + + ++L+ +M RG D VTYN +I+G
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
KL VA ++ +M+ + D + +IL+
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D V ++I+++ ++GS D A L ++M G D I YTT+I C +G+ +
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
DM+++ I PDV++ +ALI+ F K ++ EA +L++EM RG PD VTY +I G E
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 126 KKLSVASRVWGQMMEKG 142
+L A+ + M+ KG
Sbjct: 366 NQLDKANHMLDLMVSKG 382
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 86/152 (56%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ PD+V++ IL++ G + A ++ +++ K + D Y II +C + K+ A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+FC + +G+ PDV + N +I G CK +SEA L+ +M+ G P+ TYN++IR
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ E + ++++ ++ GF++D + ++++
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 86/162 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
GI ++ T +I++ R +A + ++ K+G PD + ++T+I LC G++
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + MVE G P +I+ NAL+NG C + +VS+A+ L + M G P+EVTY +++
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
+ + ++A + +M E+ LD I+I +D +
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G D++ +T L+ F G D KLL M K I+PD + ++ +I K GK+
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +M+++GI PD ++ +LI+GFCK ++ +A + + M S+G P+ T+N++I
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
G + ++ +M +G D LI
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD VT+T L++ F +E D A +LD M G P+ + +I CK+ I
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M +G+ D ++ N LI GFC+ ++ A +L++EM SR PD V+Y +++ G
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 122 LI----VEKKLSVASRVWGQMME 140
L EK L + ++ ME
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKME 489
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VTF+ L+ EG A +L+D+M +MG P I ++ LC +GK+ A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G P+ ++ ++ CKS + + AM+L +M+ R D V Y++II G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L + L A ++ +M KGF D
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKAD 281
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ D VT+ L++ F G ++AK+L +M + PD + Y ++ LC +G+ A
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF + + + D+ N +I+G C + +V +A L+ + +G PD TYN++I G
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAST 164
L + LS A ++ +M E G + + ILI A+ + +T
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ VT+ +++ + G + +A +LL +M + I D + Y+ II LCK G + A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +G D+I LI GFC + R + +L +M R PD V ++ +I
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ E KL A + +M+++G + D LI
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P ++ F+ L R D+ L QM GI+ + + +I C+ K+ LA +
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+++ G PD ++ + LING C RVSEA++L + M G P +T N ++ GL +
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 125 EKKLSVASRVWGQMMEKGF 143
K+S A + +M+E GF
Sbjct: 190 NGKVSDAVLLIDRMVETGF 208
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P ++T LV G A L+D+M + G P+ + Y ++ +CKSG+ LA
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E+ I D + + +I+G CK + A L+ EM+ +G D + Y +IRG
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ +++ M+++ T D
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPD 316
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 18 LREGSSDI----AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGI 73
LR G DI A L +MT+ P I ++ + + ++ + L + M +GI
Sbjct: 44 LRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGI 103
Query: 74 PPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASR 133
++ + + +IN C+ ++S A ++ G PD VT++ +I GL +E ++S A
Sbjct: 104 AHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALE 163
Query: 134 VWGQMMEKG 142
+ +M+E G
Sbjct: 164 LVDRMVEMG 172
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 86/154 (55%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+VVTF+ L++AF++EG A+KL D+M K I PD Y+++I C ++ A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F M+ + P+V++ N LI GFCK+ RV E M+L+ EM RG + VTY +I G
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
++ A V+ QM+ G D IL+
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 85/155 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+VVT+ L+ G A +LL M + I+P+ + ++ +I K GK+ A
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M+++ I PD+ + ++LINGFC R+ EA ++E M S+ +P+ VTYN +I+G
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
K++ ++ +M ++G + LI
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 78/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD TF L+ R + A L+D+M G PD + Y ++ LCK G I LA
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ M + I P V+ N +I+ C V++A+ L+ EM ++G P+ VTYN +IR
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + S ASR+ M+E+ + LI A
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Score = 92.8 bits (229), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 81/146 (55%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+LPD++T++IL++ G + A + + + + + PD Y +I +CK+GK+
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+FC + +G+ P+V++ +++GFC+ EA L+ EM+ GP PD TYN +IR
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
+ + + ++ + +M F D
Sbjct: 580 AHLRDGDKAASAELIREMRSCRFVGD 605
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P +V F+ L+ A + D+ L +QM +GIS + Y+ +I C+ ++ LA
Sbjct: 78 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALA 137
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M++ G PD+++ N+L+NGFC R+S+A+ L +M G PD T+N +I GL
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ S A + +M+ KG D I+++
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT+ I+V + G D+A LL +M + I P + Y TII LC + A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +GI P+V++ N+LI C R S+A +L +M R P+ VT++ +I
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ E KL A +++ +M+++ D
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPD 360
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 76/139 (54%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P VV + +++A + + A L +M GI P+ + Y ++I LC G+ A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM+E+ I P+V++ +ALI+ F K ++ EA +LY+EM R PD TY+ +I G
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 123 IVEKKLSVASRVWGQMMEK 141
+ +L A ++ M+ K
Sbjct: 372 CMHDRLDEAKHMFELMISK 390
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+T L+ F + D A+ + QM G+ PD + Y+ ++ LC +GK+ A
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F + + PD+ + N +I G CK+ +V + L+ + +G P+ VTY ++ G
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ A ++ +M E+G D LI A+ RD
Sbjct: 546 FCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI ++ T++IL+ F R +A +L +M K+G PD + +++ C +I A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ MVE G PD + N LI+G + R SEA+ L + M +G PD VTY +++ G
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L + +A + + ME+G
Sbjct: 231 LCKRGDIDLALSLLKK-MEQG 250
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 75/139 (53%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P+VVT+ L++ F + D +L +M++ G+ + + YTT+I ++ + A
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+F MV G+ PD+++ + L++G C + +V A+ ++E +Q PD TYN++I G+
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 124 VEKKLSVASRVWGQMMEKG 142
K+ ++ + KG
Sbjct: 513 KAGKVEDGWDLFCSLSLKG 531
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PD+ T++ L+ F D AK + + M P+ + Y T+I CK+ ++
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F +M ++G+ + ++ LI+GF ++ A ++++M S G PD +TY++++ GL
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
K+ A V+ + D I+I
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+ T+ I++E + G + L ++ G+ P+ + YTT++ C+ G A +
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
F +M E+G PD + N LI + + + +L EM+S D T L+
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 612
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 24 DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNAL 83
D A L M K P + ++ ++ + K K L ++ M GI ++ + + L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 84 INGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
IN FC+ ++S A+ + +M G PD VT N ++ G ++S A + GQM+E G+
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 144 TLDRANSEILISA 156
D LI
Sbjct: 183 QPDSFTFNTLIHG 195
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 106 bits (264), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 94/159 (59%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+LPDVVT+ L++ R G+ D A +LL M G+ PD+ YT++I LCKS ++ A
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F + ++G+ P+V+ ALI+G+CK+ +V EA + E+M S+ P+ +T+N +I GL
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ KL A+ + +M++ G + ILI +D
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P V T+T+L+++ A L+ +M + GI P+ YT +I LC K A
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 379
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M+E+G+ P+VI+ NALING+CK + +A+ + E M+SR P+ TYN +I+G
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG-Y 438
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ + A V +M+E+ D LI R
Sbjct: 439 CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P++ T+T+L+++ + + A++LL QM + G+ P+ I Y +I CK G I A
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M + + P+ + N LI G+CKS V +AM + +M R PD VTYN +I G
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDR 147
A R+ M ++G D+
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++PD T+T ++++ + + A L D + + G++P+ + YT +I CK+GK+ A
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
H + M+ + P+ ++ NALI+G C ++ EA L E+M G P T ++I
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L+ + A + QM+ G D I R+
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD T+T L+ + + D A K+ ++M G + + YT +I LC + +I A
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M + P V + LI C S R SEA+ L +EM+ G P+ TY ++I
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
L + K A + GQM+EKG
Sbjct: 368 LCSQCKFEKARELLGQMLEKGL 389
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P+V+T+ L+ + + G + A +++ M +SP+ Y +I CKS + A
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKA 446
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M+E+ + PDV++ N+LI+G C+S A +L M RG PD+ TY +I
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L K++ A ++ + +KG
Sbjct: 507 LCKSKRVEEACDLFDSLEQKG 527
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 81/156 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+ + P++ T+ +V + + G+ + A + + ++ + G+ PD YT++I C+ +
Sbjct: 212 DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDS 271
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F +M +G + ++ LI+G C + R+ EAM L+ +M+ +P TY ++I+
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L ++ S A + +M E G + +LI +
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+VV +T L++ + + G D A +L++M P+ + + +I LC GK+ A
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MV+ G+ P V + LI+ K A +++M S G PD TY I+
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
E +L A + +M E G + D
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPD 671
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKL--LDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
P+ T+ L++ + + S++ K + L++M + + PD + Y ++I C+SG A+
Sbjct: 426 PNTRTYNELIKGYCK---SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M ++G+ PD + ++I+ CKS RV EA L++ ++ +G P+ V Y +I G
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 123 IVEKKLSVASRVWGQMMEKG 142
K+ A + +M+ K
Sbjct: 543 CKAGKVDEAHLMLEKMLSKN 562
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P V T TIL+ L++G D A QM G PD YTT I C+ G++ A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E G+ PD+ + ++LI G+ + + A + + M+ G P + T+ +I+
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 122 LI 123
L+
Sbjct: 717 LL 718
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
+ L+ + R G D K++ +M + + P+ Y ++ CK G + A+ +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
E G+ PD + +LI G+C+ + A +++ EM +G +EV Y +I GL V +++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 130 VASRVWGQM 138
A ++ +M
Sbjct: 306 EAMDLFVKM 314
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP+ +TF L+ +G A L ++M K+G+ P T +I L K G A++
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
F M+ G PD + I +C+ R+ +A + +M+ G PD TY+ +I+G
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 124 VEKKLSVASRVWGQMMEKG 142
+ + A V +M + G
Sbjct: 684 DLGQTNFAFDVLKRMRDTG 702
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 45 YTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQ 104
Y T++ L + G + ++ +M+E + P++ + N ++NG+CK V EA Q ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 105 SRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
G PD TY +I G K L A +V+ +M KG
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKM-GISPDRIFYTTIIGHLCKSGKIG 59
+ + P+ ++ L+ G+ +A+K+ D M + GISP + + ++ CK K
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A + DM+ G P + SC LI G K +++ + G Y DE+ + +II
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
G+ + + ++ M + G +LI
Sbjct: 874 DGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLC--KSGKI 58
NG+ PD+ T++ L++ + G ++ A +L +M G P + + ++I HL K GK
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 59 GLAHTIFC----------------DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEE 102
+ C MVE + P+ S LI G C+ + A ++++
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Query: 103 MQ-SRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
MQ + G P E+ +N ++ KK + A++V M+ G + ++LI
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 18/156 (11%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PD T+T ++ + REG A+ ++ +M + G+SPD Y+++I G+
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 61 AHTIFCDMVEQGIPPDVISCNALING---------------FCKSFRVSE---AMQLYEE 102
A + M + G P + +LI C + E ++L E+
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 103 MQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQM 138
M P+ +Y +I G+ L VA +V+ M
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 86/140 (61%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDV+TF L++AF++EG A++L ++M +M I+P+ YT++I C G + A
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F M +G PDV++ +LINGFCK +V +AM+++ EM +G + +TY +I+G
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 123 IVEKKLSVASRVWGQMMEKG 142
K +VA V+ M+ +G
Sbjct: 363 GQVGKPNVAQEVFSHMVSRG 382
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 77/139 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VTFT L+ F + A +++QM +MGI PD + YTTII LCK+G + A
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++F M GI PDV+ +L+NG C S R +A L M R PD +T+N +I
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 122 LIVEKKLSVASRVWGQMME 140
+ E K A ++ +M+
Sbjct: 257 FVKEGKFLDAEELYNEMIR 275
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 35/190 (18%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDVV +T ++++ + G + A L DQM GI PD + YT+++ LC SG+ A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 62 HTIFCDMVEQGIPPDVISCNAL-----------------------------------ING 86
++ M ++ I PDVI+ NAL ING
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 87 FCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
FC V EA Q++ M+++G +PD V Y +I G KK+ A +++ +M +KG T +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 147 RANSEILISA 156
LI
Sbjct: 352 TITYTTLIQG 361
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 83/143 (58%), Gaps = 3/143 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVV +T L+ F + D A K+ +M++ G++ + I YTT+I + GK +A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR---GPYPDEVTYNLI 118
+F MV +G+PP++ + N L++ C + +V +A+ ++E+MQ R G P+ TYN++
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 119 IRGLIVEKKLSVASRVWGQMMEK 141
+ GL KL A V+ M ++
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKR 454
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D+ T +L+ F + +A L +M K+G PD + +T++I C ++ A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ MVE GI PDV+ +I+ CK+ V+ A+ L+++M++ G PD V Y ++ G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + A + M ++ D LI A
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP ++ FT L+ + D+ L D + MG+S D ++ C+S + LA +
Sbjct: 69 LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
M++ G PD+++ +LINGFC R+ EAM + +M G PD V Y II L
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILI-----SANSRDAAS 163
++ A ++ QM G D L+ S RDA S
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 38/179 (21%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ + +T+T L++ F + G ++A+++ M G+ P+ Y ++ LC +GK+ A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 62 HTIFCDMVEQ---GIPPDVISCNALINGFC------------------------------ 88
IF DM ++ G+ P++ + N L++G C
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 89 -----KSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
K+ +V A+ L+ + S+G P+ VTY +I GL E A ++ +M E G
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 57/107 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ P++ T+ +L+ G + A + + M K + I YT II +CK+GK+
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG 107
A +FC + +G+ P+V++ +I+G + EA L+ +M+ G
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 18 LREGSSDIA-KKLLDQMTKMGIS---PDRIFYTTIIGHLCKSGKIGLAHTIFCDMVE-QG 72
LR G + + LD T M S P I +T ++ + K K + + CD ++ G
Sbjct: 44 LRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINL-CDHLQIMG 102
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVAS 132
+ D+ +CN L+N FC+S + A +M G PD VT+ +I G + ++ A
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 133 RVWGQMMEKGFTLD 146
+ QM+E G D
Sbjct: 163 SMVNQMVEMGIKPD 176
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 81/140 (57%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+VVTF L++AF++EG A+KL D+M K I PD Y+++I C ++ A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F M+ + P+V++ N LINGFCK+ R+ E ++L+ EM RG + VTY +I G
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 123 IVEKKLSVASRVWGQMMEKG 142
+ A V+ QM+ G
Sbjct: 446 FQARDCDNAQMVFKQMVSDG 465
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 83/155 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+V+T++ L+ A +LL M + I+P+ + + +I K GK+ A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M+++ I PD+ + ++LINGFC R+ EA ++E M S+ +P+ VTYN +I G
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
K++ ++ +M ++G + LI
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 81/145 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P++VT+ ++V + G D+A LL++M I + + Y+T+I LCK A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +G+ P+VI+ ++LI+ C R S+A +L +M R P+ VT+N +I
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ E KL A +++ +M+++ D
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPD 364
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD +TFT L+ + A L+D+M + G P+ + Y ++ LCK G I LA
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M I +V+ + +I+ CK +A+ L+ EM+++G P+ +TY+ +I
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L ++ S ASR+ M+E+ + LI A
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 77/139 (55%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP + F L+ A + D+ L ++M ++GIS + Y +I C+ +I LA
Sbjct: 82 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M++ G P +++ ++L+NG+C R+S+A+ L ++M G PD +T+ +I GL
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 124 VEKKLSVASRVWGQMMEKG 142
+ K S A + +M+++G
Sbjct: 202 LHNKASEAVALVDRMVQRG 220
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 77/139 (55%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I +VV ++ ++++ + D A L +M G+ P+ I Y+++I LC + A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM+E+ I P+V++ NALI+ F K ++ EA +LY+EM R PD TY+ +I G
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 123 IVEKKLSVASRVWGQMMEK 141
+ +L A ++ M+ K
Sbjct: 376 CMHDRLDEAKHMFELMISK 394
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+T L+ F + D A+ + QM G+ P+ + Y T++ LCK+GK+ A
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F + + P + + N +I G CK+ +V + L+ + +G PD + YN +I G
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ A ++ +M E G
Sbjct: 550 FCRKGLKEEADALFRKMREDG 570
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P+VVT+ L+ F + D +L +M++ G+ + + YTT+I ++ A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+F MV G+ P++++ N L++G CK+ ++ +AM ++E +Q P TYN++I G+
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
K+ ++ + KG D +IS R
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI ++ T+ IL+ F R +A LL +M K+G P + ++++ C +I A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G PD I+ LI+G + SEA+ L + M RG P+ VTY +++ G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 122 LIVEKKLSVASRVWGQM 138
L + +A + +M
Sbjct: 235 LCKRGDIDLAFNLLNKM 251
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 63/114 (55%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ P+++T+ L++ + G + A + + + + + P Y +I +CK+GK+
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
+FC + +G+ PDVI N +I+GFC+ EA L+ +M+ GP PD T
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 24 DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNAL 83
D A L M K P + ++ + K K L ++ M GI ++ + N L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 84 INGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
IN FC+ ++S A+ L +M G P VT + ++ G K++S A + QM+E G+
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 144 TLDRANSEILISA 156
D LI
Sbjct: 187 RPDTITFTTLIHG 199
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 83/154 (53%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P++VTF L++AF++EG A+KL D M K I PD Y ++I C ++ A
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 309
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F MV + PD+ + N LI GFCKS RV + +L+ EM RG D VTY +I+GL
Sbjct: 310 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 369
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A +V+ QM+ G D IL+
Sbjct: 370 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 403
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+VVT++ L+ G A +LL M + I+P+ + + +I K GK A
Sbjct: 214 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 273
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DM+++ I PD+ + N+LINGFC R+ +A Q++E M S+ +PD TYN +I+G
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 333
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
K++ + ++ +M +G D LI D
Sbjct: 334 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 373
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 82/146 (56%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD++T++IL++ G + A ++ D M K I D YTT+I +CK+GK+
Sbjct: 388 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 447
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+FC + +G+ P+V++ N +I+G C + EA L ++M+ GP PD TYN +IR
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 507
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
+ + + ++ + +M F D
Sbjct: 508 AHLRDGDKAASAELIREMRSCRFVGD 533
Score = 93.2 bits (230), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ D VT+T L++ +G D A+K+ QM G+ PD + Y+ ++ LC +GK+ A
Sbjct: 354 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 413
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M + I D+ +I G CK+ +V + L+ + +G P+ VTYN +I G
Sbjct: 414 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 473
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L ++ L A + +M E G D LI A+ RD
Sbjct: 474 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 513
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD +TFT L+ + A L+D+M + G P+ + Y ++ LCK G I LA
Sbjct: 109 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 168
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M I DV+ N +I+ CK V +A+ L++EM+++G P+ VTY+ +I
Sbjct: 169 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 228
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + S AS++ M+EK + LI A
Sbjct: 229 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 263
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 77/139 (55%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I DVV F ++++ + D A L +M GI P+ + Y+++I LC G+ A
Sbjct: 180 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 239
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM+E+ I P++++ NALI+ F K + EA +L+++M R PD TYN +I G
Sbjct: 240 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 299
Query: 123 IVEKKLSVASRVWGQMMEK 141
+ +L A +++ M+ K
Sbjct: 300 CMHDRLDKAKQMFEFMVSK 318
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P++VT+ ++V + G D+A LL++M I D + + TII LCK + A
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 203
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +GI P+V++ ++LI+ C R S+A QL +M + P+ VT+N +I
Sbjct: 204 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 263
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ E K A ++ M+++ D
Sbjct: 264 FVKEGKFVEAEKLHDDMIKRSIDPD 288
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PD+ T+ L+ F D AK++ + M PD Y T+I CKS ++
Sbjct: 285 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 344
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F +M +G+ D ++ LI G A +++++M S G PD +TY++++ GL
Sbjct: 345 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 404
Query: 123 IVEKKLSVASRVWGQMMEKGFTLD 146
KL A V+ M + LD
Sbjct: 405 CNNGKLEKALEVFDYMQKSEIKLD 428
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 4 LPDVVTFTILVEAFLREGSSD--IAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
LP + F L+ A + D I+ LL +M K+G P + ++++ C +I A
Sbjct: 39 LPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 98
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G PD I+ LI+G + SEA+ L + M RG P+ VTY +++ G
Sbjct: 99 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 158
Query: 122 LIVEKKLSVASRVWGQM 138
L + +A + +M
Sbjct: 159 LCKRGDIDLAFNLLNKM 175
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 24 DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL--AHTIFCDMVEQGIPPDVISCN 81
D A L M K P + ++ + K K L + + M++ G P +++ +
Sbjct: 24 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLS 83
Query: 82 ALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEK 141
+L+NG+C R+S+A+ L ++M G PD +T+ +I GL + K S A + +M+++
Sbjct: 84 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 143
Query: 142 G 142
G
Sbjct: 144 G 144
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+ +T ++E + G D L ++ G+ P+ + Y T+I LC + A+ +
Sbjct: 428 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 487
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
M E G PD + N LI + + + +L EM+S D T L+
Sbjct: 488 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 540
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 87/154 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+ L+ AFLR G A+KL+++M G D I Y ++I LC++G++ A
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++F M+ G P ISCN LING C+S V EA++ +EM RG PD VT+N +I G
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
L ++ ++ ++ +G D L+S
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 99.4 bits (246), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI+PDV T+ L+ + +EG +A ++L M G P+ YT ++ CK GKI A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + +M G+ P+ + N LI+ FCK R+ EA++++ EM +G PD T+N +I G
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L ++ A + M+ +G + LI+A R
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+V ++TILV+ F + G D A +L++M+ G+ P+ + + +I CK +I A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF +M +G PDV + N+LI+G C+ + A+ L +M S G + VTYN +I
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ ++ A ++ +M+ +G LD LI R
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLL-DQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P++V F L+ F+ G D AK +L D +T GI PD Y ++I K G +GLA
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ DM +G P+V S L++GFCK ++ EA + EM + G P+ V +N +I
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
E ++ A ++ +M KG D LIS
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ P+ V F L+ AF +E A ++ +M + G PD + ++I LC+ +I
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + DM+ +G+ + ++ N LIN F + + EA +L EM +G DE+TYN +I+
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
GL ++ A ++ +M+ G + ILI+ R
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P + TF ++++AF D A LL MTK G P+ + Y T+I L K ++ A
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M G PD + N +I G CK R++EA ++ M RG PD++TY ++ GL
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 74/158 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDV TF L+ A LL M G+ + + Y T+I + G+I A
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +MV QG P D I+ N+LI G C++ V +A L+E+M G P ++ N++I G
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L + A +M+ +G T D LI+ R
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 70/128 (54%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G P ++ IL+ R G + A + +M G +PD + + ++I LC++G+I
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
T+F + +GIPPD ++ N L++ CK V +A L +E G P+ T++++++
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Query: 121 GLIVEKKL 128
+I ++ L
Sbjct: 713 SIIPQETL 720
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G +P+ V + L+ + + + A +LL++M MG PD + +I LCK +I
Sbjct: 246 HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINE 305
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M+ +G PD I+ L+NG CK RV A L+ R P P+ V +N +I
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF----YRIPKPEIVIFNTLIH 361
Query: 121 GLIVEKKLSVASRVWGQMM 139
G + +L A V M+
Sbjct: 362 GFVTHGRLDDAKAVLSDMV 380
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P ++ +++E + +A + M I P + ++ C +I A ++
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
DM + G P+ + LI+ K RV+EA+QL EEM G PD T+N +I GL
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 125 EKKLSVASRVWGQMMEKGFTLD 146
+++ A+++ +M+ +GF D
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPD 321
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 79/140 (56%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+VVTF L++AF +EG A+KL D+M + I P+ + Y ++I C ++ A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
IF MV + PDV++ N LINGFCK+ +V + M+L+ +M RG + VTY +I G
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 123 IVEKKLSVASRVWGQMMEKG 142
A V+ QM+ G
Sbjct: 426 FQASDCDNAQMVFKQMVSDG 445
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDV T++ L+ G A +LL M + I+P+ + + ++I K GK+ A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M+++ I P++++ N+LINGFC R+ EA Q++ M S+ PD VTYN +I G
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
KK+ ++ M +G + LI
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 79/140 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT+ ++ + G D+A LL++M K I D + Y+T+I LCK + A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +GI PDV + ++LI+ C R S+A +L +M R P+ VT+N +I
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 122 LIVEKKLSVASRVWGQMMEK 141
E KL A +++ +M+++
Sbjct: 320 FAKEGKLIEAEKLFDEMIQR 339
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 79/146 (54%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ P+++T+ L++ + G + A + + + K + PD Y + +CK+GK+
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+FC + +G+ PDVI+ N +I+GFCK EA L+ +M+ GP PD TYN +IR
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
+ + + ++ + +M F D
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGD 589
Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I DVV ++ ++++ + D A L +M GI PD Y+++I LC G+ A
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM+E+ I P+V++ N+LI+ F K ++ EA +L++EM R P+ VTYN +I G
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ +L A +++ M+ K D LI+
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VTFT LV + + A L+++M G PD + Y +I LCK G+ LA
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M + I DV+ + +I+ CK V +A+ L+ EM ++G PD TY+ +I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L + S ASR+ M+E+ + LI A +++
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+T L+ F + D A+ + QM G+ P+ + Y T++ LCK+GK+ A
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F + + + PD+ + N + G CK+ +V + L+ + +G PD + YN +I G
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ A ++ +M E G D LI A+ RD
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P +V F+ L+ A + D+ ++M +G+S + Y +I LC+ ++ A
Sbjct: 62 FPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
I M++ G P +++ N+L+NGFC R+SEA+ L ++M G PD VT+ ++ GL
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 124 VEKKLSVASRVWGQMMEKG 142
K S A + +M+ KG
Sbjct: 182 QHNKASEAVALVERMVVKG 200
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 77/153 (50%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LPDVVT+ L+ F + +L M++ G+ + + YTT+I ++ A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+F MV G+ P++++ N L++G CK+ ++ +AM ++E +Q PD TYN++ G+
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
K+ ++ + KG D +IS
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ ++ T+ I++ R A +L +M K+G P + +++ C +I A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G PD ++ L++G + + SEA+ L E M +G PD VTY +I G
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L + +A + + MEKG
Sbjct: 215 LCKRGEPDLALNLLNK-MEKG 234
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P++VT+ L+ F D A+++ M PD + Y T+I CK+ K+
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F DM +G+ + ++ LI+GF ++ A ++++M S G +P+ +TYN ++ GL
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 123 IVEKKLSVASRVW 135
KL A V+
Sbjct: 461 CKNGKLEKAMVVF 473
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+ T+ I+ E + G + L ++ G+ PD I Y T+I CK G A+T+
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
F M E G PD + N LI + + + +L +EM+S D TY L+
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
>AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23451144-23452201 FORWARD
Length = 323
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 90/153 (58%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDV+T++ ++++F R G A++LL M + I+PD + ++ +I L K GK+ A
Sbjct: 106 GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA 165
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I+ DM+ +GI P I+ N++I+GFCK R+++A ++ + M S+ PD VT++ +I G
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K++ ++ +M +G + LI
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Score = 95.9 bits (237), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I VV + +++ ++G A+ L +M GI PD I Y+ +I C+SG+ A
Sbjct: 72 IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAE 131
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM+E+ I PDV++ +ALIN K +VSEA ++Y +M RG +P +TYN +I G
Sbjct: 132 QLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGF 191
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ +L+ A R+ M K + D LI+
Sbjct: 192 CKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDVVTF+ L+ A ++EG A+++ M + GI P I Y ++I CK ++ A
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAK 201
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M + PDV++ + LING+CK+ RV M+++ EM RG + VTY +I G
Sbjct: 202 RMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 261
Query: 123 IVEKKLSVASRVWGQMMEKG 142
L A + M+ G
Sbjct: 262 CQVGDLDAAQDLLNVMISSG 281
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 31/172 (18%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISP--------------------- 40
G PDVVTFT L+ EG A L+D+M + G P
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLL 64
Query: 41 ----------DRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKS 90
+ Y II LCK G A +F +M ++GI PDVI+ + +I+ FC+S
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 91 FRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
R ++A QL +M R PD VT++ +I L+ E K+S A ++G M+ +G
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P +T+ +++ F ++ + AK++LD M SPD + ++T+I CK+ ++
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IFC+M +GI + ++ LI+GFC+ + A L M S G P+ +T+ ++
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 122 LIVEKKLSVA 131
L +K+L A
Sbjct: 296 LCSKKELRKA 305
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVVTF+ L+ + + D ++ +M + GI + + YTT+I C+ G + A +
Sbjct: 214 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 273
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQ-SRGPYPDE 112
M+ G+ P+ I+ +++ C + +A + E++Q S G + ++
Sbjct: 274 LNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGHHLED 322
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 33 MTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPP----------------- 75
M + G PD + +TT++ LC G++ A + MVE+G P
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 76 --------------DVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
V+ NA+I+ CK A L+ EM +G +PD +TY+ +I
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ + A ++ M+E+ D LI+A
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINA 155
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46100.1). | chr4:575843-577243 REVERSE
Length = 466
Score = 103 bits (258), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 87/154 (56%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
++PDV ++ IL++ F R+G + A +LLD M G PDR+ YTT++ LC+ ++ A+
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAY 280
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ C M +G PD++ N +I GFC+ R +A ++ ++M S G P+ V+Y +I GL
Sbjct: 281 KLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL 340
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ + +M+ KGF+ + S L+
Sbjct: 341 CDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G++P+ ++ +L++AF IA +L +M + + PD Y +I C+ G++
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + DM+ +G PD +S L+N C+ ++ EA +L M+ +G PD V YN +I
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
G E + A +V M+ G + + + LI
Sbjct: 304 GFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +PD +++T L+ + R+ A KLL +M G +PD + Y T+I C+ + A
Sbjct: 255 GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDA 314
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DM+ G P+ +S LI G C E + EEM S+G P N +++G
Sbjct: 315 RKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K+ A V +M+ G TL E++I
Sbjct: 375 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 67/124 (54%)
Query: 37 GISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEA 96
G+ P+ Y ++ C + + +A+ +F M+E+ + PDV S LI GFC+ +V+ A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 97 MQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
M+L ++M ++G PD ++Y ++ L + +L A ++ +M KG D + +I
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 157 NSRD 160
R+
Sbjct: 305 FCRE 308
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKM---GISPDRIFYTTIIGHLC-KSGKIGLAHTIF 65
FT L++ + + + +K+L KM +P I+ L G + A +F
Sbjct: 122 FTYLIKVY---AEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELF 178
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
G+ P+ S N L+ FC + +S A QL+ +M R PD +Y ++I+G +
Sbjct: 179 KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRK 238
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+++ A + M+ KGF DR + L+++ R
Sbjct: 239 GQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCR 272
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 103 bits (257), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 81/140 (57%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+VVTF+ L++AF++EG A+KL D+M K I PD Y+++I C ++ A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F M+ + P+V++ + LI GFCK+ RV E M+L+ EM RG + VTY +I G
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 123 IVEKKLSVASRVWGQMMEKG 142
+ A V+ QM+ G
Sbjct: 444 FQARDCDNAQMVFKQMVSVG 463
Score = 100 bits (249), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 82/140 (58%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P++VTF+ L++AF+++G A+KL ++M K I P+ Y+++I C ++G A
Sbjct: 924 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 983
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M+ + P+V++ N LINGFCK+ RV + M+L+ EM RG + VTY +I G
Sbjct: 984 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 1043
Query: 123 IVEKKLSVASRVWGQMMEKG 142
+ A V+ QM+ G
Sbjct: 1044 FQARDCDNAQMVFKQMVSVG 1063
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD TFT L+ + A L+DQM + G PD + Y T++ LCK G I LA
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ M + I DV+ N +I+G CK + +A+ L+ EM ++G PD TY+ +I
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + S ASR+ M+E+ + LI A
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 85/153 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDV T++ L+ G A +LL M + I+P+ + ++ +I K GK+ A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M+++ I PD+ + ++LINGFC R+ EA ++E M S+ +P+ VTY+ +I+G
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K++ ++ +M ++G + LI
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 77/139 (55%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P +V F L+ A + ++ L +QM +GIS D Y+ I C+ ++ LA
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M++ G PD+++ ++L+NG+C S R+S+A+ L ++M G PD T+ +I GL
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 124 VEKKLSVASRVWGQMMEKG 142
+ K S A + QM+++G
Sbjct: 200 LHNKASEAVALVDQMVQRG 218
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+++T+ IL++ + G A + + + + + PD Y +I +CK+GK+
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+FC++ +G+ P+VI+ N +I+GFC+ EA L ++M+ GP P+ TYN +IR
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ + ++ + +M GF D
Sbjct: 583 RLRDGDREASAELIKEMRSCGFAGD 607
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT+ +V + G D+A LL +M K I D + Y TII LCK + A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +GI PDV + ++LI+ C R S+A +L +M R P+ VT++ +I
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ E KL A +++ +M+++ D
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPD 362
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 83/153 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+V+T++ L+ G A +LL M + I+P+ + ++ +I K GK+ A
Sbjct: 888 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 947
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M+++ I P++ + ++LINGFC R+ EA Q+ E M + P+ VTYN +I G
Sbjct: 948 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 1007
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K++ ++ +M ++G + LI
Sbjct: 1008 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 1040
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I DVV + +++ + D A L +M GI PD Y+++I LC G+ A
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM+E+ I P+V++ +ALI+ F K ++ EA +LY+EM R PD TY+ +I G
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 123 IVEKKLSVASRVWGQMMEK 141
+ +L A ++ M+ K
Sbjct: 374 CMHDRLDEAKHMFELMISK 392
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+T L+ F + D A+ + QM +G+ P+ + Y ++ LCK+GK+ A
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F + + PD+ + N +I G CK+ +V + +L+ + +G P+ + YN +I G
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ A + +M E G + LI A RD
Sbjct: 548 FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VTFT L+ + A L+D+M + G PD + Y ++ LCK G LA
Sbjct: 783 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 842
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M I +V+ + +I+ CK +A+ L+ EM+++G P+ +TY+ +I
Sbjct: 843 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 902
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + S ASR+ M+E+ + LI A
Sbjct: 903 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 937
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 80/140 (57%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT+ +V + G +D+A LL++M I + + Y+T+I LCK A
Sbjct: 818 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 877
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +G+ P+VI+ ++LI+ C R S+A +L +M R P+ VT++ +I
Sbjct: 878 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 937
Query: 122 LIVEKKLSVASRVWGQMMEK 141
+ + KL A +++ +M+++
Sbjct: 938 FVKKGKLVKAEKLYEEMIKR 957
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI D+ T++I + F R +A +L +M K+G PD + ++++ C S +I A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G PD + LI+G + SEA+ L ++M RG PD VTY ++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L + +A + + MEKG
Sbjct: 233 LCKRGDIDLALSLLKK-MEKG 252
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT + L+ + A L+DQM +MG PD +TT+I L K A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MV++G PD+++ ++NG CK + A+ L ++M+ D V YN II G
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
L K + A ++ +M KG D LIS
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 77/139 (55%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P ++ F+ L+ A + D+ ++M +GIS + Y +I C+ ++ LA
Sbjct: 680 FPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALA 739
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M++ G PD+++ N+L+NGFC R+S+A+ L ++M G PD VT+ +I GL
Sbjct: 740 LLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 799
Query: 124 VEKKLSVASRVWGQMMEKG 142
+ K S A + +M+++G
Sbjct: 800 LHNKASEAVALIDRMVQRG 818
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP+VVT+ L+ F + D +L +M++ G+ + + YTT+I ++ A
Sbjct: 995 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 1054
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F MV G+ P++++ N L++G CK+ ++++AM ++E +Q PD TYN++I G+
Sbjct: 1055 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 1113
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 78/139 (56%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I +VV ++ ++++ + D A L +M G+ P+ I Y+++I LC G+ A
Sbjct: 854 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 913
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM+E+ I P++++ +ALI+ F K ++ +A +LYEEM R P+ TY+ +I G
Sbjct: 914 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 973
Query: 123 IVEKKLSVASRVWGQMMEK 141
+ +L A ++ M+ K
Sbjct: 974 CMLDRLGEAKQMLELMIRK 992
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 85/159 (53%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P+VVT++ L++ F + + +L +M++ G+ + + YTT+I ++ A
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+F MV G+ P++++ N L++G CK+ ++++AM ++E +Q PD TYN++I G+
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
K+ ++ + KG + + +IS R +
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI ++ T+ IL+ F R +A LL +M K+G PD + +++ C +I A
Sbjct: 713 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 772
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G PD ++ LI+G + SEA+ L + M RG PD VTY ++ G
Sbjct: 773 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 832
Query: 122 LIVEKKLSVASRVWGQM 138
L +A + +M
Sbjct: 833 LCKRGDTDLALNLLNKM 849
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+T L+ F + D A+ + QM +G+ P+ + Y ++ LCK+GK+ A
Sbjct: 1028 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 1087
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKS 90
+F + + PD+ + N +I G CK+
Sbjct: 1088 MVVFEYLQRSTMEPDIYTYNIMIEGMCKA 1116
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+ T+ I++E + G + +L ++ G+SP+ I Y T+I C+ G A ++
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNL 117
M E G P+ + N LI + + +L +EM+S G D T L
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 613
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 18 LREGSSDIAK-----KLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
LR SDI K L M K P + + ++ + K K L ++ M G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVAS 132
I D+ + + IN FC+ ++S A+ + +M G PD VT + ++ G K++S A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 133 RVWGQMMEKGFTLDRANSEILI 154
+ QM+E G+ D LI
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLI 195
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 103 bits (256), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 87/158 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+VV + +++ + D A LL++M K GI PD + Y ++I LC SG+ A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M ++ I PDV + NALI+ K RVSEA + YEEM R PD VTY+L+I G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L + +L A ++G M+ KG D ILI+ +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 84/140 (60%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDV TF L++A ++EG A++ ++M + + PD + Y+ +I LC ++ A
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F MV +G PDV++ + LING+CKS +V M+L+ EM RG + VTY ++I+G
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 123 IVEKKLSVASRVWGQMMEKG 142
KL+VA ++ +M+ G
Sbjct: 372 CRAGKLNVAEEIFRRMVFCG 391
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P +VTF L+ F R A + DQM MG P+ + Y TII LCKS ++ A +
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M + GI PDV++ N+LI+G C S R S+A ++ M R YPD T+N +I +
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILI 154
E ++S A + +M+ + D +LI
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 85/145 (58%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVVT++IL+ + + + KL +M++ G+ + + YT +I C++GK+ +A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF MV G+ P++I+ N L++G C + ++ +A+ + +MQ G D VTYN+IIRG
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ +++ A ++ + +G D
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLMPD 465
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI PDVVT+ L+ G A +++ MTK I PD + +I K G++
Sbjct: 215 DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE 274
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +M+ + + PD+++ + LI G C R+ EA +++ M S+G +PD VTY+++I
Sbjct: 275 AEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
G KK+ +++ +M ++G + ILI R
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+TIL++ + R G ++A+++ +M G+ P+ I Y ++ LC +GKI A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I DM + G+ D+++ N +I G CK+ V++A +Y + +G PD TY ++ G
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L + A ++ +M E G
Sbjct: 476 LYKKGLRREADALFRKMKEDG 496
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 80/150 (53%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+VT+++L+ D A+++ M G PD + Y+ +I CKS K+ +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
FC+M ++G+ + ++ LI G+C++ +++ A +++ M G +P+ +TYN+++ GL
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K+ A + M + G D I+I
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIII 438
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI ++ T IL+ F R +A L +M K+G P + + +++ C+ ++ A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F MV G P+V+ N +I+G CKS +V A+ L M+ G PD VTYN +I G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + S A+R+ M ++ D LI A
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP + F+ L+ A + D+ L +QM +GI + ++ C+ ++ LA +
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
M++ G P +++ +L+NGFC+ RV +A+ ++++M G P+ V YN II GL
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
K++ A + +M + G D LIS
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+++T+ +L+ G + A +L M K G+ D + Y II +CK+G++ A
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDE 112
I+C + QG+ PD+ + ++ G K EA L+ +M+ G P+E
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6129255-6130775 REVERSE
Length = 506
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 88/155 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD VTF +++ F R G + AKK+LD M K G +P+ Y+ ++ CK GKI A
Sbjct: 263 GISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEA 322
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F ++ + G+ D + L+N FC++ EAM+L EM++ D +TYN+I+RG
Sbjct: 323 KQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRG 382
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L E + A ++ Q +G L++ + I+++A
Sbjct: 383 LSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNA 417
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGIS-PDRIFYTTIIGHLCKSGKIGL 60
G+ P+ F ILV+ + G + A ++++M + GIS P+ I Y+T++ L +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 61 AHTIFCDMV-EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A +F DM+ ++GI PD ++ N +INGFC++ V A ++ + M+ G P+ Y+ ++
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
G K+ A + + ++ + G LD L++ R+ +
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGET 354
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 71/142 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P+V ++ L+ F + G AK+ D++ K G+ D + YTT++ C++G+
Sbjct: 297 NGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDE 356
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +M D ++ N ++ G R EA+Q+ ++ S G + ++ +Y +I+
Sbjct: 357 AMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILN 416
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
L +L A + M E+G
Sbjct: 417 ALCCNGELEKAVKFLSVMSERG 438
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLL-DQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
+ P + + + + G ++++KLL +G+ P+ + ++ H CK+G I A
Sbjct: 156 VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFA 215
Query: 62 HTIFCDMVEQGIP-PDVISCNALINGFCKSFRVSEAMQLYEEMQSR-GPYPDEVTYNLII 119
+ +M GI P+ I+ + L++ R EA++L+E+M S+ G PD VT+N++I
Sbjct: 216 FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
G ++ A ++ M + G + N L++
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D +T+ +++ EG S+ A ++LDQ G+ ++ Y I+ LC +G++ A
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M E+GI P + N L+ C+S +++ G P ++ ++ + E
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKE 491
Query: 126 KKL 128
+KL
Sbjct: 492 RKL 494
>AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6814521-6816404 FORWARD
Length = 627
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 84/158 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI+ D VT+ IL+ + + G + A L D+M GI P + YT++I LC+ K A
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +V +G+ PD++ N L++G C + A L +EM PD+VTYN ++RG
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L E K A + G+M +G D + LIS S+
Sbjct: 512 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 549
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P +VT+ LV+ F G + A+ ++ +M G PD Y I+ +C G+ A
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---A 311
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M E G+ PD +S N LI G + + A +EM +G P TYN +I G
Sbjct: 312 SEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L +E K+ A + ++ EKG LD ILI+
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD+V L++ G+ D A LL +M M I+PD + Y ++ LC GK A
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M +GI PD IS N LI+G+ K A + +EM S G P +TYN +++G
Sbjct: 522 RELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKG 581
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L ++ +A + +M +G
Sbjct: 582 LSKNQEGELAEELLREMKSEG 602
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++PD V++ IL+ G ++A D+M K G+ P Y T+I L KI A
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA 381
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ ++ E+GI D ++ N LING+C+ +A L++EM + G P + TY +I
Sbjct: 382 EILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV 441
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L + K A ++ +++ KG D
Sbjct: 442 LCRKNKTREADELFEKVVGKGMKPD 466
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI P T+T L+ R+ + A +L +++ G+ PD + T++ C G +
Sbjct: 426 DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDR 485
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ +M I PD ++ N L+ G C + EA +L EM+ RG PD ++YN +I
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 121 GLIVEKKLSVASRVWGQMMEKGFT 144
G + A V +M+ GF
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFN 569
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+ T+ ++ EG A ++L +M ++G+ PD + Y +I +G + +A
Sbjct: 290 GFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+MV+QG+ P + N LI+G ++ A L E++ +G D VTYN++I G
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
A + +MM G
Sbjct: 407 YCQHGDAKKAFALHDEMMTDG 427
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 3/160 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P T ++ R + A M +M I + + +I LCK GK+ A
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
M GI P +++ N L+ GF R+ A + EM+S+G PD TYN I+
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ E + AS V +M E G D + ILI S +
Sbjct: 305 MCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
+ F +LV + D A + M + G P I+ L + +I A + D
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
M I +V + N +IN CK ++ +A M+ G P VTYN +++G + +
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 128 LSVASRVWGQMMEKGFTLD 146
+ A + +M KGF D
Sbjct: 276 IEGARLIISEMKSKGFQPD 294
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 100 bits (249), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 82/145 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GIL D T+T+L+ + D A+++ +M GI+PD Y +I K G + A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+IF +MVE+G+ P+VI N L+ GFC+S + +A +L +EM +G +P+ VTY II G
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L+ A R++ +M KG D
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPD 731
Score = 92.8 bits (229), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 74/120 (61%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDV ++ +L+ F + G+ A + D+M + G++P+ I Y ++G C+SG+I A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M +G+ P+ ++ +I+G+CKS ++EA +L++EM+ +G PD Y ++ G
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 79/144 (54%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ P+ T+ + ++ A K + +M + G+ P+++ T +I CK GK+
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + + MV+QGI D + L+NG K+ +V +A +++ EM+ +G PD +Y ++I
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 121 GLIVEKKLSVASRVWGQMMEKGFT 144
G + AS ++ +M+E+G T
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLT 659
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 35/194 (18%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G P+VV +T L++ FL+ A ++L +M + GI+PD Y ++I L K+ ++
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 61 AHTIFCDMVEQGIPPDVIS-----------------------------------CNALIN 85
A + +MVE G+ P+ + C LIN
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
+CK +V EA Y M +G D TY +++ GL K+ A ++ +M KG
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 146 DRANSEILISANSR 159
D + +LI+ S+
Sbjct: 626 DVFSYGVLINGFSK 639
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G++P + L+E + RE + +LL +M K I Y T++ +C SG +
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ I +M+ G P+V+ LI F ++ R +AM++ +EM+ +G PD YN +I
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 121 GLIVEKKLSVASRVWGQMMEKGF 143
GL K++ A +M+E G
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGL 518
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+V+ + +L+ F R G + AK+LLD+M+ G+ P+ + Y TII CKSG + A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +G+ PD L++G C+ V A+ ++ +G +N +I
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINW 775
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
+ K + + V ++M+ F
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSF 797
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+LP+ V T L+ + ++G A M GI D YT ++ L K+ K+ A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF +M +GI PDV S LINGF K + +A +++EM G P+ + YN+++ G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
++ A + +M KG
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGL 693
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
T+ +V+ G D A ++ +M G P+ + YTT+I ++ + G A + +M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
EQGI PD+ N+LI G K+ R+ EA EM G P+ TY I G I +
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 129 SVASRVWGQMMEKG 142
+ A + +M E G
Sbjct: 539 ASADKYVKEMRECG 552
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+ VT+ I+++ +EG+ + AK+L QM + P I YT+++ K G+ +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEV-----TYNLII 119
F + + GI PD I + +IN F K ++A+ L ++M ++ D T ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRAN-----SEILISANSR 159
G ++ VA +V M+ + D A +E IS+N R
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D T+++L++ L+ ++D AK L+ +M GI+ Y I + K G + A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M+ G+ P + +LI G+C+ V + +L EM+ R TY +++G
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ L A + +M+ G
Sbjct: 427 MCSSGDLDGAYNIVKEMIASG 447
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGI----SPDRIFYTTIIGHLCKSGK 57
G F L+ + G +++ ++L+++ P+ + Y +I +LCK G
Sbjct: 761 GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 58 IGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNL 117
+ A +F M + P VI+ +L+NG+ K R +E +++E + G PD + Y++
Sbjct: 821 LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSV 880
Query: 118 IIRGLIVEKKLSVASRVWGQMMEK 141
II + E + A + QM K
Sbjct: 881 IINAFLKEGMTTKALVLVDQMFAK 904
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPD-RIFYTTIIGHLCKSGKIGLA 61
++P + +L++A LR D+ + M + + D + ++ II H C++G + L
Sbjct: 182 LVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAH-CRAGNVQLG 240
Query: 62 HTIFC---------------------DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLY 100
+ M+ +G+ P + + LI+G CK R+ +A L
Sbjct: 241 KDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLL 300
Query: 101 EEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
EM S G D TY+L+I GL+ + A + +M+ G +
Sbjct: 301 VEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 100 bits (249), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 81/137 (59%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVVT+T ++ + + G A LLD M ++GI P + + ++ K+G++ A I
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M+ G PDV++ +LI+G+C+ +VS+ +L+EEM +RG +P+ TY+++I L
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 125 EKKLSVASRVWGQMMEK 141
E +L A + GQ+ K
Sbjct: 395 ENRLLKARELLGQLASK 411
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 84/155 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVVTFT L++ + R G +L ++M G+ P+ Y+ +I LC ++ A
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + + I P N +I+GFCK+ +V+EA + EEM+ + PD++T+ ++I G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
++ ++ A ++ +M+ G + D+ L+S
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSC 496
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D TF IL+ G ++ A +LL M+ G PD + Y T+I CKS ++ A +F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 66 CDMVEQGI-PPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
D+ + PDV++ ++I+G+CK+ ++ EA L ++M G YP VT+N+++ G
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
++ A + G+M+ G D LI R
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P VTF +LV+ + + G A+++ +M G PD + +T++I C+ G++
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M +G+ P+ + + LIN C R+ +A +L ++ S+ P YN +I G
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K++ A+ + +M +K D+ ILI
Sbjct: 427 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+ T++IL+ A E A++LL Q+ I P Y +I CK+GK+ A
Sbjct: 377 GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ I +M ++ PD I+ LI G C R+ EA+ ++ +M + G PD++T + ++
Sbjct: 437 NVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSC 496
Query: 122 LI 123
L+
Sbjct: 497 LL 498
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
A KL D+ + D + +I LC GK A + M G PD+++ N LI
Sbjct: 190 AMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 86 GFCKSFRVSEAMQLYEEMQSRG-PYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFT 144
GFCKS +++A +++++++S PD VTY +I G K+ AS + M+ G
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIY 309
Query: 145 LDRANSEILISANSR 159
+L+ ++
Sbjct: 310 PTNVTFNVLVDGYAK 324
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
T+ +L + + G D+A ++ + M G+SP+ ++ + GK+ A +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
E + + N+L+N K RV +AM+L++E D T+N++IRGL K
Sbjct: 165 FE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 129 SVASRVWGQMMEKGFTLDRANSEILISA 156
A + G M G D LI
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQG 250
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTT-IIGHLCKSGKIGLA 61
I+P + +++ F + G + A ++++M K PD+I +T IIGH C G++ A
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH-CMKGRMFEA 471
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYE 101
+IF MV G PD I+ ++L++ K+ EA L +
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 100 bits (249), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 81/137 (59%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVVT+T ++ + + G A LLD M ++GI P + + ++ K+G++ A I
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M+ G PDV++ +LI+G+C+ +VS+ +L+EEM +RG +P+ TY+++I L
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 125 EKKLSVASRVWGQMMEK 141
E +L A + GQ+ K
Sbjct: 395 ENRLLKARELLGQLASK 411
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 84/155 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVVTFT L++ + R G +L ++M G+ P+ Y+ +I LC ++ A
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + + I P N +I+GFCK+ +V+EA + EEM+ + PD++T+ ++I G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
++ ++ A ++ +M+ G + D+ L+S
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSC 496
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D TF IL+ G ++ A +LL M+ G PD + Y T+I CKS ++ A +F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 66 CDMVEQGI-PPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
D+ + PDV++ ++I+G+CK+ ++ EA L ++M G YP VT+N+++ G
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
++ A + G+M+ G D LI R
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P VTF +LV+ + + G A+++ +M G PD + +T++I C+ G++
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M +G+ P+ + + LIN C R+ +A +L ++ S+ P YN +I G
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K++ A+ + +M +K D+ ILI
Sbjct: 427 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+ T++IL+ A E A++LL Q+ I P Y +I CK+GK+ A
Sbjct: 377 GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ I +M ++ PD I+ LI G C R+ EA+ ++ +M + G PD++T + ++
Sbjct: 437 NVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSC 496
Query: 122 LI 123
L+
Sbjct: 497 LL 498
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
A KL D+ + D + +I LC GK A + M G PD+++ N LI
Sbjct: 190 AMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 86 GFCKSFRVSEAMQLYEEMQSRG-PYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFT 144
GFCKS +++A +++++++S PD VTY +I G K+ AS + M+ G
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIY 309
Query: 145 LDRANSEILISANSR 159
+L+ ++
Sbjct: 310 PTNVTFNVLVDGYAK 324
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
T+ +L + + G D+A ++ + M G+SP+ ++ + GK+ A +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
E + + N+L+N K RV +AM+L++E D T+N++IRGL K
Sbjct: 165 FE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 129 SVASRVWGQMMEKGFTLDRANSEILISA 156
A + G M G D LI
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQG 250
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTT-IIGHLCKSGKIGLA 61
I+P + +++ F + G + A ++++M K PD+I +T IIGH C G++ A
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH-CMKGRMFEA 471
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYE 101
+IF MV G PD I+ ++L++ K+ EA L +
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 100 bits (248), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 81/156 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G PDV++++ +V + R G D KL++ M + G+ P+ Y +IIG LC+ K+
Sbjct: 718 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 777
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F +M+ QGI PD + LI+GFCK + A + + EM SR PD +TY II
Sbjct: 778 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 837
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
G + A +++ +M KG D LI+
Sbjct: 838 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 873
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
GILPD V +T L++ F + G A K +M I+PD + YT II C+ G +
Sbjct: 788 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 847
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F +M +G+ PD ++ LING+CK+ + +A +++ M G P+ VTY +I
Sbjct: 848 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 907
Query: 121 GLIVEKKLSVASRVWGQMMEKGF 143
GL E L A+ + +M + G
Sbjct: 908 GLCKEGDLDSANELLHEMWKIGL 930
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 80/143 (55%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G+ PD VTFT L+ + + G A ++ + M + G SP+ + YTT+I LCK G +
Sbjct: 858 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ + +M + G+ P++ + N+++NG CKS + EA++L E ++ G D VTY ++
Sbjct: 918 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 977
Query: 121 GLIVEKKLSVASRVWGQMMEKGF 143
++ A + +M+ KG
Sbjct: 978 AYCKSGEMDKAQEILKEMLGKGL 1000
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 79/141 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+VVT+T L++ +EG D A +LL +M K+G+ P+ Y +I+ LCKSG I A
Sbjct: 894 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + G+ D ++ L++ +CKS + +A ++ +EM +G P VT+N+++ G
Sbjct: 954 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ L ++ M+ KG
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKG 1034
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G+ P +VTF +L+ F G + +KLL+ M GI+P+ + +++ C +
Sbjct: 998 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 1057
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A I+ DM +G+ PD + L+ G CK+ + EA L++EM+ +G TY+++I+
Sbjct: 1058 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 1117
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDR 147
G + KK A V+ QM +G D+
Sbjct: 1118 GFLKRKKFLEAREVFDQMRREGLAADK 1144
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 84/158 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P++ T+ +V + G+ + A KL+ + G++ D + YTT++ CKSG++ A
Sbjct: 929 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 988
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I +M+ +G+ P +++ N L+NGFC + + +L M ++G P+ T+N +++
Sbjct: 989 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 1048
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ L A+ ++ M +G D E L+ + +
Sbjct: 1049 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 1086
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDV+T+T ++ F + G A KL +M G+ PD + +T +I CK+G + A
Sbjct: 825 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 884
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M++ G P+V++ LI+G CK + A +L EM G P+ TYN I+ GL
Sbjct: 885 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 944
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A ++ G+ G D L+ A
Sbjct: 945 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 978
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 81/155 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D VT+T L++A+ + G D A+++L +M G+ P + + ++ C G +
Sbjct: 964 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 1023
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M+ +GI P+ + N+L+ +C + A +Y++M SRG PD TY +++G
Sbjct: 1024 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 1083
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ + A ++ +M KGF++ + +LI
Sbjct: 1084 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1118
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 32 QMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSF 91
+ ++G+ + Y +I +C+ G+I AH + M +G PDVIS + ++NG+C+
Sbjct: 679 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 738
Query: 92 RVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD----- 146
+ + +L E M+ +G P+ Y II L KL+ A + +M+ +G D
Sbjct: 739 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 798
Query: 147 ------------RANSEILISANSRD 160
RA S+ +SRD
Sbjct: 799 TLIDGFCKRGDIRAASKFFYEMHSRD 824
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
GI P+ TF LV+ + + A + M G+ PD Y ++ CK+ +
Sbjct: 1033 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 1092
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A +F +M +G V + + LI GF K + EA +++++M+ G D+ ++
Sbjct: 1093 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 1150
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 100 bits (248), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 81/156 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G PDV++++ +V + R G D KL++ M + G+ P+ Y +IIG LC+ K+
Sbjct: 718 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 777
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F +M+ QGI PD + LI+GFCK + A + + EM SR PD +TY II
Sbjct: 778 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 837
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
G + A +++ +M KG D LI+
Sbjct: 838 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 873
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
GILPD V +T L++ F + G A K +M I+PD + YT II C+ G +
Sbjct: 788 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 847
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F +M +G+ PD ++ LING+CK+ + +A +++ M G P+ VTY +I
Sbjct: 848 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 907
Query: 121 GLIVEKKLSVASRVWGQMMEKGF 143
GL E L A+ + +M + G
Sbjct: 908 GLCKEGDLDSANELLHEMWKIGL 930
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 80/143 (55%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G+ PD VTFT L+ + + G A ++ + M + G SP+ + YTT+I LCK G +
Sbjct: 858 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ + +M + G+ P++ + N+++NG CKS + EA++L E ++ G D VTY ++
Sbjct: 918 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 977
Query: 121 GLIVEKKLSVASRVWGQMMEKGF 143
++ A + +M+ KG
Sbjct: 978 AYCKSGEMDKAQEILKEMLGKGL 1000
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 79/141 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+VVT+T L++ +EG D A +LL +M K+G+ P+ Y +I+ LCKSG I A
Sbjct: 894 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + G+ D ++ L++ +CKS + +A ++ +EM +G P VT+N+++ G
Sbjct: 954 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ L ++ M+ KG
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKG 1034
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G+ P +VTF +L+ F G + +KLL+ M GI+P+ + +++ C +
Sbjct: 998 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 1057
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A I+ DM +G+ PD + L+ G CK+ + EA L++EM+ +G TY+++I+
Sbjct: 1058 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 1117
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDR 147
G + KK A V+ QM +G D+
Sbjct: 1118 GFLKRKKFLEAREVFDQMRREGLAADK 1144
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 84/158 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P++ T+ +V + G+ + A KL+ + G++ D + YTT++ CKSG++ A
Sbjct: 929 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 988
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I +M+ +G+ P +++ N L+NGFC + + +L M ++G P+ T+N +++
Sbjct: 989 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 1048
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ L A+ ++ M +G D E L+ + +
Sbjct: 1049 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 1086
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDV+T+T ++ F + G A KL +M G+ PD + +T +I CK+G + A
Sbjct: 825 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 884
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M++ G P+V++ LI+G CK + A +L EM G P+ TYN I+ GL
Sbjct: 885 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 944
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A ++ G+ G D L+ A
Sbjct: 945 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 978
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 81/155 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D VT+T L++A+ + G D A+++L +M G+ P + + ++ C G +
Sbjct: 964 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 1023
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M+ +GI P+ + N+L+ +C + A +Y++M SRG PD TY +++G
Sbjct: 1024 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 1083
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ + A ++ +M KGF++ + +LI
Sbjct: 1084 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1118
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 32 QMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSF 91
+ ++G+ + Y +I +C+ G+I AH + M +G PDVIS + ++NG+C+
Sbjct: 679 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 738
Query: 92 RVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD----- 146
+ + +L E M+ +G P+ Y II L KL+ A + +M+ +G D
Sbjct: 739 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 798
Query: 147 ------------RANSEILISANSRD 160
RA S+ +SRD
Sbjct: 799 TLIDGFCKRGDIRAASKFFYEMHSRD 824
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
GI P+ TF LV+ + + A + M G+ PD Y ++ CK+ +
Sbjct: 1033 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 1092
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A +F +M +G V + + LI GF K + EA +++++M+ G D+ ++
Sbjct: 1093 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 1150
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 100 bits (248), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDV TF IL+ EGS + + L+ +M K G +P + Y T++ CK G+ A
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M +G+ DV + N LI+ C+S R+++ L +M+ R +P+EVTYN +I G
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 308
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISAN 157
E K+ +AS++ +M+ G + + LI +
Sbjct: 309 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 83/161 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G P +VT+ ++ + ++G A +LLD M G+ D Y +I LC+S +I
Sbjct: 222 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 281
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ + DM ++ I P+ ++ N LINGF +V A QL EM S G P+ VT+N +I
Sbjct: 282 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 341
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
G I E A +++ M KG T + +L+ ++A
Sbjct: 342 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 382
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P V++ +L++ + D+A+ +M + G+ RI YT +I LCK+G + A
Sbjct: 363 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M + GI PD+++ +ALINGFCK R A ++ + G P+ + Y+ +I
Sbjct: 423 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 482
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L A R++ M+ +G T D +L+++
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTS 517
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 73/121 (60%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI PD+VT++ L+ F + G AK+++ ++ ++G+SP+ I Y+T+I + C+ G +
Sbjct: 432 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 491
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A I+ M+ +G D + N L+ CK+ +V+EA + M S G P+ V+++ +I
Sbjct: 492 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 551
Query: 121 G 121
G
Sbjct: 552 G 552
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ +T+T +++ + G D A LL++M+K GI PD + Y+ +I CK G+
Sbjct: 397 NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 456
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A I C + G+ P+ I + LI C+ + EA+++YE M G D T+N+++
Sbjct: 457 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 516
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L K++ A M G + + + LI+
Sbjct: 517 SLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 552
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKK--LLDQMTKMGISPDRIFYTTIIGHLCKSGKIG 59
G+ DV T+ +L+ R S+ IAK LL M K I P+ + Y T+I GK+
Sbjct: 258 GVDADVCTYNMLIHDLCR--SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+A + +M+ G+ P+ ++ NALI+G EA++++ M+++G P EV+Y +++
Sbjct: 316 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 375
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDR 147
GL + +A + +M G + R
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+ VTF L++ + EG+ A K+ M G++P + Y ++ LCK+ + LA
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 387
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M G+ I+ +I+G CK+ + EA+ L EM G PD VTY+ +I G
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Query: 122 LIVEKKLSVASRVWGQMMEKGFT 144
+ A + ++ G +
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLS 470
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P V + +V A + G +D A LL M KM + P +TT++ CK+G + A
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M G+ D++S N LI G C ++ A +LYEEM+ G + TY +IRGL
Sbjct: 985 ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Query: 123 IV-EKKLSVASRVWGQMMEKGF 143
+ E S A + ++ +GF
Sbjct: 1045 LARETAFSGADIILKDLLARGF 1066
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GILP+ V+F L+ + G A + D+MTK+G P Y +++ LCK G +
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + D + N L+ CKS +++A+ L+ EM R PD TY +I
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656
Query: 121 GLIVEKKLSVA 131
GL + K +A
Sbjct: 657 GLCRKGKTVIA 667
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTII-GHLCKSGKIGLA 61
I P+ VT+ L+ F EG IA +LL++M G+SP+ + + +I GH+ G A
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI-SEGNFKEA 352
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M +G+ P +S L++G CK+ A Y M+ G +TY +I G
Sbjct: 353 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 412
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L L A + +M + G D LI+
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+LP+ V +T V+ + G +QM +G +PD + +I + GKI +
Sbjct: 680 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 739
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M Q P++ + N L++G+ K VS + LY + G PD++T + ++ G+
Sbjct: 740 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 799
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
L + ++ + +G +DR +LIS
Sbjct: 800 CESNMLEIGLKILKAFICRGVEVDRYTFNMLIS 832
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 76/159 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT +++ + R G + LL +M P+ Y ++ K + +
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ ++ GI PD ++C++L+ G C+S + +++ + RG D T+N++I
Sbjct: 774 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRD 160
+++ A + M G +LD+ + ++S +R+
Sbjct: 834 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P V T ++ + ++ G L +M K I PD + +I LC G +
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M + G P +++ N +++ +CK R A++L + M+S+G D TYN++I
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 272
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L +++ + M ++ + LI+ S +
Sbjct: 273 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G D TF +LV + + G A++ + MT GI P+ + + +I SG+ A
Sbjct: 503 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 562
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++F +M + G P + +L+ G CK + EA + + + + D V YN ++
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 622
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
+ L+ A ++G+M+++ D LIS R +
Sbjct: 623 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 664
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
+ IL+ +LREG + ++ M G +P I+G + KSG+ + +M+
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
++ I PDV + N LIN C ++ L ++M+ G P VTYN ++ + +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 130 VASRVWGQMMEKGFTLDRANSEILI 154
A + M KG D +LI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLI 270
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NGILPD +T LV +I K+L G+ DR + +I C +G+I
Sbjct: 783 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 842
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M GI D +C+A+++ ++ R E+ + EM +G P+ Y +I
Sbjct: 843 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 902
Query: 121 GL 122
GL
Sbjct: 903 GL 904
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+ + L+ R G A + ++M I P + + ++ L K GK A
Sbjct: 889 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M++ + P + S L++ CK+ V EA++L M + G D V+YN++I G
Sbjct: 949 TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITG 1008
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L + +++A ++ +M GF + + LI
Sbjct: 1009 LCAKGDMALAFELYEEMKGDGFLANATTYKALI 1041
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D TF +L+ G + A L+ MT +GIS D+ ++ L ++ + +
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M +QGI P+ LING C+ + A + EEM + P V + ++R
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 122 L 122
L
Sbjct: 939 L 939
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 100 bits (248), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 86/145 (59%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P++ T +LV+A ++ + A K+LD++ MG+ P+ + YTTI+G G + A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M+++G PD + L++G+CK R SEA + ++M+ P+EVTY ++IR
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L EKK A ++ +M+E+ F D
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPD 330
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N I P+ VT+ +++ A +E S A+ + D+M + PD +I LC+ K+
Sbjct: 290 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 349
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ M++ PD + LI+ CK RV+EA +L++E + +G P +TYN +I
Sbjct: 350 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIA 408
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
G+ + +L+ A R+W M E+ + +LI S++
Sbjct: 409 GMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNG 449
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P++VT+T ++ ++ G + AK++L++M G PD YT ++ CK G+ A
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
T+ DM + I P+ ++ +I CK + EA +++EM R PD +I
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDA 340
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L + K+ A +W +M++ D A LI
Sbjct: 341 LCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 373
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+PD +++A + D A L +M K PD +T+I LCK G++ A
Sbjct: 327 FMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEAR 386
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F D E+G P +++ N LI G C+ ++EA +L+++M R P+ TYN++I GL
Sbjct: 387 KLF-DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGL 445
Query: 123 IVEKKLSVASRVWGQMMEKG 142
+ RV +M+E G
Sbjct: 446 SKNGNVKEGVRVLEEMLEIG 465
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N +PD + L+ +EG A+KL D+ K G P + Y T+I +C+ G++
Sbjct: 360 NNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTE 418
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ DM E+ P+ + N LI G K+ V E +++ EEM G +P++ T+ ++
Sbjct: 419 AGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFE 478
Query: 121 GL 122
GL
Sbjct: 479 GL 480
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
F L+ + G + + ++ ++ G+ T++ L ++ + L H +F +
Sbjct: 123 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 182
Query: 70 EQ-GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
E GI P++ +CN L+ CK + A ++ +E+ S G P+ VTY I+ G + +
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 129 SVASRVWGQMMEKGFTLDRANSEILISA 156
A RV +M+++G+ D +L+
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDG 270
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 1/163 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLL-DQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G+ V + L+ ++ D+ + + GI+P+ ++ LCK I
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ + ++ G+ P++++ ++ G+ + A ++ EEM RG YPD TY +++
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
G + S A+ V M + + ++I A ++ S
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 100 bits (248), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 80/152 (52%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+VVTF L++AF +EG A+KL ++M + I PD I Y +I C ++ A
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F MV + P++ + N LINGFCK RV + ++L+ EM RG + VTY II+G
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
A V+ QM+ D IL+
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 77/155 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD TFT L+ + A L+DQM + G PD + Y T++ LCK G I LA
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M I +V+ N +I+ CK V A+ L+ EM+++G P+ VTYN +I
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + S ASR+ M+EK + LI A
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 80/139 (57%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I +VV F ++++ + ++A L +M GI P+ + Y ++I LC G+ A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M+E+ I P+V++ NALI+ F K ++ EA +L+EEM R PD +TYNL+I G
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 123 IVEKKLSVASRVWGQMMEK 141
+ +L A +++ M+ K
Sbjct: 374 CMHNRLDEAKQMFKFMVSK 392
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 77/139 (55%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P +V F L+ A + ++ L +QM +GIS D Y+ I C+ ++ LA
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M++ G PD+++ ++L+NG+C S R+S+A+ L ++M G PD T+ +I GL
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 124 VEKKLSVASRVWGQMMEKG 142
+ K S A + QM+++G
Sbjct: 200 LHNKASEAVALVDQMVQRG 218
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT+ +V + G D+A LL++M I + + + TII LCK + +A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +GI P+V++ N+LIN C R S+A +L M + P+ VT+N +I
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
E KL A ++ +M+++ D +LI+
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 77/142 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+VVT+ L+ G A +LL M + I+P+ + + +I K GK+ A
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M+++ I PD I+ N LINGFC R+ EA Q+++ M S+ P+ TYN +I G
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
K++ ++ +M ++G
Sbjct: 408 FCKCKRVEDGVELFREMSQRGL 429
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+T +++ F + G D A+ + QM + D + Y+ ++ LC GK+ A
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF + + + ++ N +I G CK+ +V EA L+ + + PD VTYN +I G
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISG 544
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRD 160
L ++ L A ++ +M E G + LI AN RD
Sbjct: 545 LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N + D++T++IL+ G D A + + K + + Y T+I +CK+GK+G
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +FC + I PDV++ N +I+G C + EA L+ +M+ G P+ TYN +IR
Sbjct: 522 AWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
+ + + ++ + +M GF D
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGFVGD 604
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI D+ T++I + F R +A +L +M K+G PD + ++++ C S +I A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G PD + LI+G + SEA+ L ++M RG PD VTY ++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 122 LIVEKKLSVASRVWGQM 138
L + +A + +M
Sbjct: 233 LCKRGDIDLALNLLNKM 249
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 18 LREGSSDIAK-----KLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
LR SDI K L M K P + + ++ + K K L ++ M G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVAS 132
I D+ + + IN FC+ ++S A+ + +M G PD VT + ++ G K++S A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 133 RVWGQMMEKGFTLDRANSEILI 154
+ QM+E G+ D LI
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLI 195
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 99.8 bits (247), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 85/155 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+VV + ++++ +G + A +L M KMGI PD + Y ++I L SG G++
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I DM+ GI PDVI+ +ALI+ + K ++ EA + Y EM R P+ VTYN +I G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + L A +V ++ KGF + LI+
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 84/153 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDV+TF+ L++ + +EG AKK ++M + ++P+ + Y ++I LC G + A
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +V +G P+ ++ N LING+CK+ RV + M++ M G D TYN + +G
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQG 368
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K S A +V G+M+ G D IL+
Sbjct: 369 YCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILL 401
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDVVT+ L+ G+ ++ ++L M +MGISPD I ++ +I K G++ A
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M+++ + P++++ N+LING C + EA ++ + S+G +P+ VTYN +I G
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
K++ ++ M G
Sbjct: 334 YCKAKRVDDGMKILCVMSRDG 354
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ VT+ L+ + + D K+L M++ G+ D Y T+ C++GK A
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA 378
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MV G+ PD+ + N L++G C ++ +A+ E++Q +TYN+II+G
Sbjct: 379 EKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKG 438
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L K+ A ++ + KG + D
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPD 463
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P++VT+ L+ G D AKK+L+ + G P+ + Y T+I CK+ ++ I
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
C M G+ D + N L G+C++ + S A ++ M S G +PD T+N+++ GL
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Query: 125 EKKLSVA 131
K+ A
Sbjct: 407 HGKIGKA 413
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP +V F+ L+ A + + L + +GIS D +TT+I C+ ++ LA +
Sbjct: 76 LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
M++ G P +++ +L+NGFC R EAM L +++ G P+ V YN II L
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
+ +++ A V M + G D LI+
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI D+ +FT L++ F R +A L +M K+G P + + +++ C + A
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +V G P+V+ N +I+ C+ +V+ A+ + + M+ G PD VTYN +I
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L V++R+ MM G + D LI ++
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEG 268
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ D T+ L + + + G A+K+L +M G+ PD + ++ LC GKIG
Sbjct: 353 DGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGK 412
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A D+ + +I+ N +I G CK+ +V +A L+ + +G PD +TY ++
Sbjct: 413 ALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMI 472
Query: 121 GLIVEKKLSVASRVWGQMMEK 141
GL ++ A ++ +M ++
Sbjct: 473 GLRRKRLWREAHELYRKMQKE 493
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G +PDV+T+ +++ + + G + A +LD+M+ +SPD + Y TI+ LC SGK+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQ 222
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M+++ PDVI+ LI C+ V AM+L +EM+ RG PD VTYN+++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
G+ E +L A + M G
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSG 304
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ PDVVT+ ++ + G A ++LD+M + PD I YT +I C+ +G A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M ++G PDV++ N L+NG CK R+ EA++ +M S G P+ +T+N+I+R +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
+ A ++ M+ KGF+ ILI+
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 85/158 (53%), Gaps = 6/158 (3%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G P+V+T I++ + G A+KLL M + G SP + + +I LC+ G +G
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A I M + G P+ +S N L++GFCK ++ A++ E M SRG YPD VTYN ++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANS 158
L + K+ A + Q+ KG S +LI+ N+
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGC------SPVLITYNT 454
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVVT+ +LV +EG D A K L+ M G P+ I + I+ +C +G+ A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DM+ +G P V++ N LIN C+ + A+ + E+M G P+ ++YN ++ G
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
EKK+ A +M+ +G D +++A +D
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G +PD++ T L+ F R G + A K+L+ + G PD I Y +I CK+G+I
Sbjct: 131 HGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINN 190
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ M + PDV++ N ++ C S ++ +AM++ + M R YPD +TY ++I
Sbjct: 191 ALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ + A ++ +M ++G T D +L++
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 84/155 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT+ ++ A ++G + A ++L+Q++ G SP I Y T+I L K+GK G A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M + + PD I+ ++L+ G + +V EA++ + E + G P+ VT+N I+ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L ++ A M+ +G + + ILI
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P VVTF IL+ R+G A +L++M + G P+ + Y ++ CK K+ A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
MV +G PD+++ N ++ CK +V +A+++ ++ S+G P +TYN +I G
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L K A ++ +M K D L+ SR+
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 75/142 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P ++T+ +++ + G + A KLLD+M + PD I Y++++G L + GK+ A
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F + GI P+ ++ N+++ G CKS + A+ M +RG P+E +Y ++I G
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
L E A + ++ KG
Sbjct: 564 LAYEGMAKEALELLNELCNKGL 585
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 79/142 (55%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G P+ +++ L+ F +E D A + L++M G PD + Y T++ LCK GK+
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A I + +G P +I+ N +I+G K+ + +A++L +EM+++ PD +TY+ ++
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
GL E K+ A + + + G
Sbjct: 493 GLSREGKVDEAIKFFHEFERMG 514
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 14 VEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGI 73
+ +R G + K L+ M G PD I TT+I C+ GK A I + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 74 PPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASR 133
PDVI+ N +I+G+CK+ ++ A+ + + M PD VTYN I+R L KL A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225
Query: 134 VWGQMMEKGFTLDRANSEILISANSRDAA 162
V +M+++ D ILI A RD+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSG 254
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 87/153 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VT+ L++ + G DIA + +M G+SPD Y+ II L K+G + A
Sbjct: 429 GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
H +FC+MV+QG P++++ N +++ K+ A++LY +MQ+ G PD+VTY++++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L L A V+ +M +K + D +L+
Sbjct: 549 LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G D T+T +V R KLLD+M + G P+ + Y +I ++ + A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M E G PD ++ LI+ K+ + AM +Y+ MQ+ G PD TY++II
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L L A +++ +M+++G T + I++ +++
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VT++I++E G + A+ + +M + PD Y ++ K+G + A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+ M+ G+ P+V +CN+L++ F + +++EA +L + M + G P TY L++
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P++VT+ I+++ + + A KL M G PD++ Y+ ++ L G + A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M ++ PD L++ + K+ V +A Q Y+ M G P+ T N ++
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
+ K++ A + M+ G +L+S
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 87/153 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VT+ L++ + G DIA + +M G+SPD Y+ II L K+G + A
Sbjct: 429 GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
H +FC+MV+QG P++++ N +++ K+ A++LY +MQ+ G PD+VTY++++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L L A V+ +M +K + D +L+
Sbjct: 549 LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G D T+T +V R KLLD+M + G P+ + Y +I ++ + A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M E G PD ++ LI+ K+ + AM +Y+ MQ+ G PD TY++II
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L L A +++ +M+++G T + I++ +++
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VT++I++E G + A+ + +M + PD Y ++ K+G + A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+ M+ G+ P+V +CN+L++ F + +++EA +L + M + G P TY L++
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P++VT+ I+++ + + A KL M G PD++ Y+ ++ L G + A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M ++ PD L++ + K+ V +A Q Y+ M G P+ T N ++
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
+ K++ A + M+ G +L+S
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7029701-7031314 FORWARD
Length = 537
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV+ +T LV + R G A+K+ +M GI P+ Y+ +I LC+ G+I AH +
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F DM++ G P+ I+ N L+ K+ R + +Q+Y +M+ G PD +TYN +I
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 125 EKKLSVASRVWGQMMEK 141
++ L A +V M++K
Sbjct: 373 DENLENAVKVLNTMIKK 389
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +PD + F+I++ R+ + A+ D + K PD I YT ++ C++G+I A
Sbjct: 216 GCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEA 274
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M GI P+V + + +I+ C+ ++S A ++ +M G P+ +T+N ++R
Sbjct: 275 EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRV 334
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRD 160
+ + +V+ QM + G D LI A+ RD
Sbjct: 335 HVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRD 373
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 1/136 (0%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFC 66
+ TFTIL+ ++R G + A ++M G PD+I ++ +I +L + + A + F
Sbjct: 186 IETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF- 244
Query: 67 DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEK 126
D ++ PDVI L+ G+C++ +SEA ++++EM+ G P+ TY+++I L
Sbjct: 245 DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 127 KLSVASRVWGQMMEKG 142
++S A V+ M++ G
Sbjct: 305 QISRAHDVFADMLDSG 320
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 70/139 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+V T++I+++A R G A + M G +P+ I + ++ K+G+
Sbjct: 285 GIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKV 344
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ M + G PD I+ N LI C+ + A+++ M + + T+N I R
Sbjct: 345 LQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRY 404
Query: 122 LIVEKKLSVASRVWGQMME 140
+ ++ ++ A R++ +MME
Sbjct: 405 IEKKRDVNGAHRMYSKMME 423
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD +T+ L+EA R+ + + A K+L+ M K + + TI ++ K + A
Sbjct: 355 GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGA 414
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
H ++ M+E P+ ++ N L+ F S +++ +EM + P+ TY L++
Sbjct: 415 HRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTM 474
Query: 122 LIVEKKLSVASRVWGQMMEK 141
+ A +++ +M+E+
Sbjct: 475 FCGMGHWNNAYKLFKEMVEE 494
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Query: 24 DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNAL 83
D+A L+D M + +T +I ++G A F M + G PD I+ + +
Sbjct: 168 DLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIV 227
Query: 84 INGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
I+ + R SEA ++ ++ R PD + Y ++RG ++S A +V+ +M G
Sbjct: 228 ISNLSRKRRASEAQSFFDSLKDRFE-PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGI 286
Query: 144 TLDRANSEILISANSR 159
+ I+I A R
Sbjct: 287 EPNVYTYSIVIDALCR 302
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 92/159 (57%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ P++ T+ ++ ++G + A ++ D+M + G+S + + Y T+IG LC+ K+
Sbjct: 262 DGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNE 321
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ + M GI P++I+ N LI+GFC ++ +A+ L +++SRG P VTYN+++
Sbjct: 322 ANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
G + S A+++ +M E+G + ILI +R
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 83/153 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ ++VT+ L+ RE + A K++DQM GI+P+ I Y T+I C GK+G A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ D+ +G+ P +++ N L++GFC+ S A ++ +EM+ RG P +VTY ++I
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ A ++ M E G D +LI
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+VV +T L++ ++G + AK L +M K+G+ + YT +I L K+G
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ M E G+ P++ + N ++N CK R +A Q+++EM+ RG + VTYN +I G
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L E KL+ A++V QM G
Sbjct: 313 LCREMKLNEANKVVDQMKSDG 333
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P +VT+ ILV F R+G + A K++ +M + GI P ++ YT +I +S + A
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E G+ PDV + + LI+GFC +++EA +L++ M + P+EV YN +I G
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
E A ++ +M EK + A+ +I ++ S
Sbjct: 488 YCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKS 529
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 86/163 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + T+T+L+ + G ++ ++M + G+ P+ Y ++ LCK G+ A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M E+G+ ++++ N LI G C+ +++EA ++ ++M+S G P+ +TYN +I G
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAST 164
KL A + + +G + IL+S R ++
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 85/158 (53%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
++ DV +F IL++ G + + LL ++T+ G SP+ + YTT+I CK G+I A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F +M + G+ + + LING K+ + ++YE+MQ G +P+ TYN ++ L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRD 160
+ + A +V+ +M E+G + + LI R+
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 77/141 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P VT+TIL++ F R + + A +L M ++G+ PD Y+ +I C G++ A
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F MVE+ P+ + N +I G+CK A++L +EM+ + P+ +Y +I
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L E+K A R+ +M++ G
Sbjct: 523 LCKERKSKEAERLVEKMIDSG 543
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 92/154 (59%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+LPDV+T+ IL++ G + A ++ + + K + + YTTII +CK GK+
Sbjct: 422 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 481
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +FC + +G+ P+V++ +I+G CK +SEA L +M+ G P++ TYN +IR
Sbjct: 482 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 541
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ + L+ ++++ +M GF+ D ++ +++I
Sbjct: 542 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 84/144 (58%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG PDVVT+ +V R G + +A LL +M + + D Y+TII LC+ G I
Sbjct: 177 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 236
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++F +M +GI V++ N+L+ G CK+ + ++ L ++M SR P+ +T+N+++
Sbjct: 237 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 296
Query: 121 GLIVEKKLSVASRVWGQMMEKGFT 144
+ E KL A+ ++ +M+ +G +
Sbjct: 297 VFVKEGKLQEANELYKEMITRGIS 320
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 85/152 (55%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I+P+V+TF +L++ F++EG A +L +M GISP+ I Y T++ C ++ A+
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 343
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ MV PD+++ +LI G+C RV + M+++ + RG + VTY+++++G
Sbjct: 344 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 403
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K+ +A ++ +M+ G D IL+
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 82/145 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
+ DV T++ ++++ R+G D A L +M GI + Y +++ LCK+GK
Sbjct: 213 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 272
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DMV + I P+VI+ N L++ F K ++ EA +LY+EM +RG P+ +TYN ++ G
Sbjct: 273 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 332
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
++ +LS A+ + M+ + D
Sbjct: 333 YCMQNRLSEANNMLDLMVRNKCSPD 357
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 35/199 (17%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N PD+VTFT L++ + D K+ ++K G+ + + Y+ ++ C+SGKI L
Sbjct: 352 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 411
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS--------------- 105
A +F +MV G+ PDV++ L++G C + ++ +A++++E++Q
Sbjct: 412 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 471
Query: 106 --------------------RGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
+G P+ +TY ++I GL + LS A+ + +M E G
Sbjct: 472 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 531
Query: 146 DRANSEILISANSRDAAST 164
+ LI A+ RD T
Sbjct: 532 NDCTYNTLIRAHLRDGDLT 550
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 67/121 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD TF L++ EG A L+D+M + G PD + Y +I+ +C+SG LA
Sbjct: 143 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 202
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E+ + DV + + +I+ C+ + A+ L++EM+++G VTYN ++RG
Sbjct: 203 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 262
Query: 122 L 122
L
Sbjct: 263 L 263
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NGI ++ T I++ F R + A +L ++ K+G PD + T+I L GK+
Sbjct: 107 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 166
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + MVE G PDV++ N+++NG C+S S A+ L +M+ R D TY+ II
Sbjct: 167 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 226
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
L + + A ++ +M KG
Sbjct: 227 SLCRDGCIDAAISLFKEMETKG 248
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 79/144 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+++T+ L++ + + A +LD M + SPD + +T++I C ++
Sbjct: 318 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 377
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F ++ ++G+ + ++ + L+ GFC+S ++ A +L++EM S G PD +TY +++ G
Sbjct: 378 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 437
Query: 122 LIVEKKLSVASRVWGQMMEKGFTL 145
L KL A ++ + + L
Sbjct: 438 LCDNGKLEKALEIFEDLQKSKMDL 461
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI VVT+ LV + G + LL M I P+ I + ++ K GK+ A
Sbjct: 248 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 307
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ ++ +M+ +GI P++I+ N L++G+C R+SEA + + M PD VT+ +I+G
Sbjct: 308 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 367
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ K++ +V+ + ++G + IL+
Sbjct: 368 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 402
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP +V F+ A R ++ Q+ GI+ + +I C+ K A++
Sbjct: 75 LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 134
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ +++ G PD + N LI G +VSEA+ L + M G PD VTYN I+ G+
Sbjct: 135 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 194
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
S+A + +M E+ D +I + RD
Sbjct: 195 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 233
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFC 66
+V +T ++E + G + A L + G+ P+ + YT +I LCK G + A+ +
Sbjct: 463 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 522
Query: 67 DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
M E G P+ + N LI + ++ + +L EEM+S G D + ++I L+
Sbjct: 523 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 579
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 31 DQMTKMGISPDRIFYTTIIGHLCKSGK---IGLAHTIFCDMVEQGIPPDVISCNALINGF 87
D M + + D + Y G + + G+ + A + +M+++GI P+ I+ ++LI+GF
Sbjct: 685 DLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGF 744
Query: 88 CKSFRVSEAMQLYEEMQSRGPYPDEV 113
CK R+ EA Q+ + M ++G PD++
Sbjct: 745 CKENRLDEANQMLDLMVTKGCDPDDI 770
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 18 LREGSSDIAKK----LLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVE-QG 72
LR G DI K L +M + P + ++ + ++ + L FC +E G
Sbjct: 50 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNG 108
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVAS 132
I ++ + N +IN FC+ + A + ++ G PD T+N +I+GL +E K+S A
Sbjct: 109 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 168
Query: 133 RVWGQMMEKG 142
+ +M+E G
Sbjct: 169 VLVDRMVENG 178
>AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18694316-18695734 REVERSE
Length = 472
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 82/142 (57%), Gaps = 1/142 (0%)
Query: 2 GILPDVVTFTILVEAFLR-EGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G+ P V + +L++A R +G+ D K+ +M K G PD Y T+I LC+ G+I
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F +MVE+ P V++ +LING C S V EAM+ EEM+S+G P+ TY+ ++
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
GL + + A ++ MM +G
Sbjct: 271 GLCKDGRSLQAMELFEMMMARG 292
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 79/145 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD T+ L+ R G D AKKL +M + +P + YT++I LC S + A
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+M +GI P+V + ++L++G CK R +AM+L+E M +RG P+ VTY +I G
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L E+K+ A + +M +G D
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPD 331
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P VVT+T L+ + D A + L++M GI P+ Y++++ LCK G+ A +
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M+ +G P++++ LI G CK ++ EA++L + M +G PD Y +I G
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANS 158
K A+ +M+ G T +R I + ++
Sbjct: 345 ISKFREAANFLDEMILGGITPNRLTWNIHVKTSN 378
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+V T++ L++ ++G S A +L + M G P+ + YTT+I LCK KI A
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNL---- 117
+ M QG+ PD +I+GFC + EA +EM G P+ +T+N+
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKT 376
Query: 118 ---IIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
++RGL S A ++ M +G +++ E L+
Sbjct: 377 SNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLV 415
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 28 KLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGF 87
++ +M P + Y T++ L + ++ LA + +M E G+PP V S N LI
Sbjct: 107 RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKAL 166
Query: 88 CKS-FRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEK 141
C++ V ++++ EM RG PD TY +I GL ++ A +++ +M+EK
Sbjct: 167 CRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 41/159 (25%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKI--- 58
G P++VT+T L+ +E A +LLD+M G+ PD Y +I C K
Sbjct: 292 GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREA 351
Query: 59 -------------------------------GL-------AHTIFCDMVEQGIPPDVISC 80
GL A T++ M +GI +V +
Sbjct: 352 ANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETL 411
Query: 81 NALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+L+ CK +A+QL +E+ + G P + T+ L+I
Sbjct: 412 ESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV T++ L+ A +E D A L D+M K G+ P+ + +TT+I ++G+I L
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ M+ +G+ PD++ N L+NGFCK+ + A + + M RG PD++TY +I G
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ A + +M + G LDR L+
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALV 457
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 85/163 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD +T+T L++ F R G + A ++ +M + GI DR+ ++ ++ +CK G++ A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+M+ GI PD ++ +++ FCK +L +EMQS G P VTYN+++ G
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAST 164
L ++ A + M+ G D L+ + R A S+
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSS 572
Score = 92.8 bits (229), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P+ V FT L+ R G D+ K+ +M G+ PD + Y T++ CK+G + A
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I M+ +G+ PD I+ LI+GFC+ V A+++ +EM G D V ++ ++ G
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ E ++ A R +M+ G D +++ A
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD+V + LV F + G A+ ++D M + G+ PD+I YTT+I C+ G + A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I +M + GI D + +AL+ G CK RV +A + EM G PD+VTY +++
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ ++ +M G
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDG 515
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P VV+F L+ + + G+ D +L QM K PD Y+ +I LCK K+ AH +
Sbjct: 273 PTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGL 332
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M ++G+ P+ + LI+G ++ + + Y++M S+G PD V YN ++ G
Sbjct: 333 FDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCK 392
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L A + M+ +G D+ LI R
Sbjct: 393 NGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 5/163 (3%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NGI D V F+ LV +EG A++ L +M + GI PD + YT ++ CK G
Sbjct: 444 NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT 503
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ +M G P V++ N L+NG CK ++ A L + M + G PD++TYN ++
Sbjct: 504 GFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
G + + +S+ + Q E G D A+ + ++ N D AS
Sbjct: 564 G---HHRHANSSKRYIQKPEIGIVADLASYKSIV--NELDRAS 601
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +V F IL+ F +EG+ A+K+ D++TK + P + + T+I CK G +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M + PDV + +ALIN CK ++ A L++EM RG P++V + +I G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
++ + + +M+ KG D
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPD 379
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%)
Query: 45 YTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQ 104
+ ++ CK G I A +F ++ ++ + P V+S N LING+CK + E +L +M+
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 105 SRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
PD TY+ +I L E K+ A ++ +M ++G + LI +SR+
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNG 359
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 47 TIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR 106
++ + K G + ++++ G P +V N L+N FCK +S+A ++++E+ R
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 107 GPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
P V++N +I G L R+ QM + D LI+A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA 319
>AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28086800-28089367 FORWARD
Length = 855
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 85/153 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VT+ L++ + G DIA + +M + G+SPD Y+ II L K+G + A
Sbjct: 424 GCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAA 483
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
H +FC+MV QG P++++ N +I K+ A++LY +MQ+ G PD+VTY++++
Sbjct: 484 HRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEV 543
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L L A V+ +M K + D +L+
Sbjct: 544 LGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLV 576
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G D T+T +V R KLLD+M + G P+ + Y +I ++ + A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M E G PD ++ LI+ K+ + AM +Y+ MQ G PD TY++II
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L L A R++ +M+ +G T + I+I+ +++
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 511
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VT++I++E G + A+ + +M + PD Y ++ K+G + A
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+ M++ G+ P+V +CN+L++ F + R+SEA L + M + G +P TY L++
Sbjct: 589 WQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 79/140 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ DVVT+ +V + G + A LL +M + I PD + Y+ II LCK G A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M+E+GI P+V + N +I+GFC R S+A +L +M R PD +T+N +I
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 122 LIVEKKLSVASRVWGQMMEK 141
+ E KL A ++ +M+ +
Sbjct: 376 SVKEGKLFEAEKLCDEMLHR 395
Score = 92.8 bits (229), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 82/152 (53%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVVTF +++ + R D +LL ++++ G+ + Y T+I C+ + A +
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M+ G+ PD I+CN L+ GFC++ ++ EA++L+E +Q D V YN+II G+
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
K+ A ++ + G D ++IS
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD +T IL+ F + A +L + + I D + Y II +CK K+
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +FC + G+ PDV + N +I+GFC +S+A L+ +M+ G PD TYN +IR
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
G + ++ + + +M GF+ D
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 74/136 (54%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDVV ++ +++ ++G A+ L +M + GI+P+ Y +I C G+ A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM+E+ I PDV++ NALI+ K ++ EA +L +EM R +PD VTYN +I G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 123 IVEKKLSVASRVWGQM 138
+ A ++ M
Sbjct: 412 CKHNRFDDAKHMFDLM 427
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P V+TF L+ EG A L+++M G+ D + Y TI+ +CK G A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E I PDV+ +A+I+ CK S+A L+ EM +G P+ TYN +I G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ S A R+ M+E+ D LISA+ ++
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PD VT+ ++ F + D AK + D M SPD + + TII C++ ++
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ ++ +G+ + + N LI+GFC+ ++ A L++EM S G PD +T N+++ G
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+KL A ++ + LD I+I
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 31/184 (16%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+V T+ +++ F G A++LL M + I+PD + + +I K GK+ A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCK-------------------------------S 90
+ +M+ + I PD ++ N++I GFCK +
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRA 445
Query: 91 FRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANS 150
RV E MQL E+ RG + TYN +I G L+ A ++ +M+ G D
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 151 EILI 154
IL+
Sbjct: 506 NILL 509
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 2 GILPDVVTFTILVEA---------------FLREGSSDIAKKLLDQMTKMGISPDRIFYT 46
G PDVVTF L+ ++ E A L DQM ++G++P I +
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 47 TIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR 106
T+I LC G++ A + MV +G+ DV++ ++NG CK A+ L +M+
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 107 GPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
PD V Y+ II L + S A ++ +M+EKG
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
++ +F IL++ F + ++TK+G PD + + T++ LC +I A +F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 66 C---------------DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYP 110
MVE G+ P VI+ N LING C RV EA L +M +G +
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 111 DEVTYNLIIRGL 122
D VTY I+ G+
Sbjct: 260 DVVTYGTIVNGM 271
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
++ F+R D+A L +M I + + +I C K+ + + F + + G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 73 IPPDVISCNALINGFCKSFRVSEAM---------------QLYEEMQSRGPYPDEVTYNL 117
PDV++ N L++G C R+SEA+ L+++M G P +T+N
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 118 IIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
+I GL +E ++ A+ + +M+ KG +D
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHID 260
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 22 SSDIAKKLLDQMTKMGISPDRIFYTTI-----IGHLCKSGKIGLAHTIFCDMVEQGIPPD 76
S D A D M + R FYT + IG + + +A +++ M + IP +
Sbjct: 86 SLDDAIDFFDYMVR-----SRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLN 140
Query: 77 VISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWG 136
+ S N LI FC ++S ++ + ++ G PD VT+N ++ GL +E ++S A ++G
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 137 QMMEKGF 143
M+E GF
Sbjct: 201 YMVETGF 207
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 84/158 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GILPDV TF L++ + +A +L ++M G PD Y +I LC GK+ A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M G VI+ N LI+GFCK+ + EA ++++EM+ G + VTYN +I G
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L +++ A+++ QM+ +G D+ L++ R
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDV T+ ++ + G A ++LDQM SP+ + Y T+I LCK ++ A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + +GI PDV + N+LI G C + AM+L+EEM+S+G PDE TYN++I
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L + KL A + QM G
Sbjct: 445 LCSKGKLDEALNMLKQMELSG 465
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PD TF LV + G A +++D M + G PD Y ++I LCK G++
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M+ + P+ ++ N LI+ CK +V EA +L + S+G PD T+N +I+
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
GL + + VA ++ +M KG D +LI +
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 76/142 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ + VT+ L++ + + A +L+DQM G PD+ Y +++ H C+ G I
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A I M G PD+++ LI+G CK+ RV A +L +Q +G YN +I+
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
GL ++K + A ++ +M+E+
Sbjct: 619 GLFRKRKTTEAINLFREMLEQN 640
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G V+T+ L++ F + + A+++ D+M G+S + + Y T+I LCKS ++
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M+ +G PD + N+L+ FC+ + +A + + M S G PD VTY +I
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTL 145
GL ++ VAS++ + KG L
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGINL 608
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++PD TFT +++ ++ EG D A ++ +QM + G S + I+ CK G++ A
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 62 HTIFCDMVEQ-GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+M Q G PD + N L+NG CK+ V A+++ + M G PD TYN +I
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
GL ++ A V QM+ + + + LIS
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDV TF +L++A R A +L+ M G+ PD +TT++ + G + A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR-GPYPDEVTYNLIIR 120
I MVE G +S N +++GFCK RV +A+ +EM ++ G +PD+ T+N ++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
GL + A + M+++G+ D
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPD 329
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD T+ +L+++ +G D A +L QM G + I Y T+I CK+ K A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF +M G+ + ++ N LI+G CKS RV +A QL ++M G PD+ TYN ++
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A+ + M G D LIS
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQM-TKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
TF IL+E++ + D ++D M + G+ PD FY ++ L + L
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK 179
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
M GI PDV + N LI C++ ++ A+ + E+M S G PDE T+ +++G I E
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 128 LSVASRVWGQMMEKGFTLDRANSEILI 154
L A R+ QM+E G + + +++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIV 266
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD T+ L+ F R G A ++ MT G PD + Y T+I LCK+G++ +A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM--QSRGPYPDEVTYNLII 119
+ + +GI + N +I G + + +EA+ L+ EM Q+ P PD V+Y ++
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP-PDAVSYRIVF 653
Query: 120 RGLIV-EKKLSVASRVWGQMMEKGF 143
RGL + A +++EKGF
Sbjct: 654 RGLCNGGGPIREAVDFLVELLEKGF 678
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG PD+VT+ L+ + G ++A KLL + GI+ Y +I L + K
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 61 AHTIFCDMVEQG-IPPDVISCNALINGFCK-SFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A +F +M+EQ PPD +S + G C + EA+ E+ +G P+ + ++
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
Query: 119 IRGLIVEKKLSVASRVWGQMMEKG 142
GL+ ++ +M+K
Sbjct: 689 AEGLLTLSMEETLVKLVNMVMQKA 712
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 79/140 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ DVVT+ +V + G + A LL +M + I PD + Y+ II LCK G A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M+E+GI P+V + N +I+GFC R S+A +L +M R PD +T+N +I
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 122 LIVEKKLSVASRVWGQMMEK 141
+ E KL A ++ +M+ +
Sbjct: 376 SVKEGKLFEAEKLCDEMLHR 395
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 82/152 (53%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVVTF +++ + R D +LL ++++ G+ + Y T+I C+ + A +
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M+ G+ PD I+CN L+ GFC++ ++ EA++L+E +Q D V YN+II G+
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
K+ A ++ + G D ++IS
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD +T IL+ F + A +L + + I D + Y II +CK K+
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +FC + G+ PDV + N +I+GFC +S+A L+ +M+ G PD TYN +IR
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
G + ++ + + +M GF+ D
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 74/136 (54%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDVV ++ +++ ++G A+ L +M + GI+P+ Y +I C G+ A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM+E+ I PDV++ NALI+ K ++ EA +L +EM R +PD VTYN +I G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 123 IVEKKLSVASRVWGQM 138
+ A ++ M
Sbjct: 412 CKHNRFDDAKHMFDLM 427
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P V+TF L+ EG A L+++M G+ D + Y TI+ +CK G A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E I PDV+ +A+I+ CK S+A L+ EM +G P+ TYN +I G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ S A R+ M+E+ D LISA+ ++
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 31/184 (16%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+V T+ +++ F G A++LL M + I+PD + + +I K GK+ A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCK-------------------------------S 90
+ +M+ + I PD ++ N++I GFCK +
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRA 445
Query: 91 FRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANS 150
RV E MQL E+ RG + TYN +I G L+ A ++ +M+ G D
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 151 EILI 154
IL+
Sbjct: 506 NILL 509
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PD VT+ ++ F + D AK + D M SPD + + TII C++ ++
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ ++ +G+ + + N LI+GFC+ ++ A L++EM S G PD +T N+++ G
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+KL A ++ + LD I+I
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 2 GILPDVVTFTILVEA---------------FLREGSSDIAKKLLDQMTKMGISPDRIFYT 46
G PDVVTF L+ ++ E A L DQM ++G++P I +
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 47 TIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR 106
T+I LC G++ A + MV +G+ DV++ ++NG CK A+ L +M+
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 107 GPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
PD V Y+ II L + S A ++ +M+EKG
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
++ +F IL++ F + ++TK+G PD + + T++ LC +I A +F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 66 C---------------DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYP 110
MVE G+ P VI+ N LING C RV EA L +M +G +
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 111 DEVTYNLIIRGL 122
D VTY I+ G+
Sbjct: 260 DVVTYGTIVNGM 271
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
++ F+R D+A L +M I + + +I C K+ + + F + + G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 73 IPPDVISCNALINGFCKSFRVSEAM---------------QLYEEMQSRGPYPDEVTYNL 117
PDV++ N L++G C R+SEA+ L+++M G P +T+N
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 118 IIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
+I GL +E ++ A+ + +M+ KG +D
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHID 260
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)
Query: 4 LPDVVTFTILVEAF-LREGSS-----DIAKKLLDQMTKMGISPDRIFYTTI-----IGHL 52
LP + T E L+ GS D A D M + R FYT + IG
Sbjct: 62 LPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVR-----SRPFYTAVDCNKVIGVF 116
Query: 53 CKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDE 112
+ + +A +++ M + IP ++ S N LI FC ++S ++ + ++ G PD
Sbjct: 117 VRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDV 176
Query: 113 VTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
VT+N ++ GL +E ++S A ++G M+E GF
Sbjct: 177 VTFNTLLHGLCLEDRISEALALFGYMVETGF 207
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 96.3 bits (238), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 85/157 (54%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P V+T+TIL+EA + EG D A KL+D+M G+ PD Y TII +CK G + A +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
++ +G PDVIS N L+ + E +L +M S P+ VTY+++I L
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ K+ A + M EKG T D + + LI+A R+
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDV+++ IL+ A L +G + +KL+ +M P+ + Y+ +I LC+ GKI A
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E+G+ PD S + LI FC+ R+ A++ E M S G PD V YN ++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L K A ++G++ E G + + ++ + SA
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 75/152 (49%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV + L+ F + D A ++LD+M SPD + Y +IG LC GK+ LA +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
++ P VI+ LI V EA++L +EM SRG PD TYN IIRG+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
E + A + + KG D + IL+ A
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRA 307
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD VT+ I++ + G D+A K+L+Q+ P I YT +I G + A +
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+M+ +G+ PD+ + N +I G CK V A ++ ++ +G PD ++YN+++R L+
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ K ++ +M + + ILI+ RD
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD ++ L+ AF REG D+A + L+ M G PD + Y T++ LCK+GK A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF + E G P+ S N + + S A+ + EM S G PDE+TYN +I
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 122 LIVE 125
L E
Sbjct: 483 LCRE 486
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+VVT++IL+ R+G + A LL M + G++PD Y +I C+ G++ +A
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M+ G PD+++ N ++ CK+ + +A++++ ++ G P+ +YN + L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
A + +MM G D +IS R+
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ ++ + A G A ++ +M GI PD I Y ++I LC+ G + A
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DM P V++ N ++ GFCK+ R+ +A+ + E M G P+E TY ++I G
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Query: 122 L 122
+
Sbjct: 553 I 553
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 19 REGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVI 78
R G+ + LL+ M + G +PD I T +I I A + +++E+ PDV
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVF 159
Query: 79 SCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQM 138
+ NALINGFCK R+ +A ++ + M+S+ PD VTYN++I L KL +A +V Q+
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 139 M 139
+
Sbjct: 220 L 220
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NGI PD +T+ ++ REG D A +LL M P + Y ++ CK+ +I
Sbjct: 467 NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM 103
A + MV G P+ + LI G + +EAM+L ++
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 96.3 bits (238), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 85/155 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++PD V +TIL++ + R+G +A L ++M + G + D + Y TI+ LCK +G A
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M E+ + PD + LI+G CK + AM+L+++M+ + D VTYN ++ G
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A +W M+ K + IL++A
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
++PD+V F+ ++ F R G+ D A + + + G+ PD + YT +I C+ G I +A
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M++QG DV++ N +++G CK + EA +L+ EM R +PD T ++I G
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 123 IVEKKLSVASRVWGQMMEKGFTLD 146
L A ++ +M EK LD
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLD 514
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 76/136 (55%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DVVT+ L++ F + G D AK++ M I P I Y+ ++ LC G + A ++
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+M+ + I P V+ CN++I G+C+S S+ E+M S G PD ++YN +I G + E
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 126 KKLSVASRVWGQMMEK 141
+ +S A + +M E+
Sbjct: 634 ENMSKAFGLVKKMEEE 649
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P V+ +++ + R G++ + L++M G PD I Y T+I + + A
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 63 TIFCDMVEQ--GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ M E+ G+ PDV + N++++GFC+ ++ EA + +M RG PD TY +I
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
G + + L+ A R+ +M+++GF+ D
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 79/145 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P V T+ ++ + G + AK++ +M + G+SPD Y +++ CK G +
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F DM + + PD++ +++++ F +S + +A+ + ++ G PD V Y ++I+G
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ +SVA + +M+++G +D
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMD 444
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
ILP ++++ILV A +G A ++ D+M I P + ++I C+SG
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR--GPYPDEVTYNLIIR 120
+ M+ +G PD IS N LI GF + +S+A L ++M+ G PD TYN I+
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
G + ++ A V +M+E+G DR+ +I+
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD+VT+ L+ A+ +G + A +L++ M G SP Y T+I LCK GK A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M+ G+ PD + +L+ CK V E +++ +M+SR PD V ++ ++
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L A + + E G D ILI R
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKM--GISPDRIFYTTIIGHLCKSGKIG 59
G +PD +++ L+ F+RE + A L+ +M + G+ PD Y +I+ C+ ++
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDE 112
A + M+E+G+ PD + +INGF ++EA ++++EM RG PD+
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
L+ + +R G ++A + ++++ G+ + ++ LCK GK+ T + E+G
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVAS 132
+ PD+++ N LI+ + + EA +L M +G P TYN +I GL K A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 133 RVWGQMMEKGFTLDRANSEILI 154
V+ +M+ G + D L+
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLL 347
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ +V T I+V A ++G + L Q+ + G+ PD + Y T+I G +
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M +G P V + N +ING CK + A +++ EM G PD TY R
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY----R 344
Query: 121 GLIVE 125
L++E
Sbjct: 345 SLLME 349
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 46 TTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS 105
+IG L + G + LA ++ ++ G+ +V + N ++N CK ++ + ++Q
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 106 RGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFT 144
+G YPD VTYN +I + + A + M KGF+
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 302
>AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587298-23588220 FORWARD
Length = 257
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PD+VTF+ L+ AF++E A+++ +M + I P I Y ++I CK ++ A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M +G PDV++ + LING+CK+ RV M+++ EM RG + VTY +I G
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 123 IVEKKLSVASRVWGQMMEKGFTLD 146
L A + +M+ G D
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPD 219
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+V+T+ ++++F G A +LL M + I+PD + ++ +I K K+ A
Sbjct: 40 GIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEA 99
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I+ +M+ I P I+ N++I+GFCK RV +A ++ + M S+G PD VT++ +I G
Sbjct: 100 EEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLING 159
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K++ ++ +M +G + LI
Sbjct: 160 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 192
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I DVV T +V+ ++G+ A+ L +M + GI P+ + Y +I C SG+ A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M+E+ I PD+++ +ALIN F K +VSEA ++Y+EM +P +TYN +I G
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ ++ A R+ M KG + D LI+
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLING 159
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 74/130 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
I P +T+ +++ F ++ D AK++LD M G SPD + ++T+I CK+ ++
Sbjct: 110 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 169
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IFC+M +GI + ++ LI+GFC+ + A L EM S G PD +T++ ++ G
Sbjct: 170 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 229
Query: 122 LIVEKKLSVA 131
L +K+L A
Sbjct: 230 LCSKKELRKA 239
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%)
Query: 33 MTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFR 92
M + I D + T I+ LCK G A +F +M E+GI P+V++ N +I+ FC S R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 93 VSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMM 139
S+A QL M + PD VT++ +I + E+K+S A ++ +M+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML 107
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 55/103 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVVTF+ L+ + + D ++ +M + GI + + YTT+I C+ G + A
Sbjct: 145 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 204
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQ 104
+ +M+ G+ PD I+ + ++ G C + +A + E++Q
Sbjct: 205 QDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 86/155 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ V++T L++ + +EG+ + AK+L +M+ G+ P+ I Y +I CK GKI A
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M G+ PD + +LI+G C + V EAM+L+ EM +G + VTY ++I G
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 583
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L K A ++ +M KG+T+D LI +
Sbjct: 584 LSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 82/146 (56%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G++ + VT+T+L+E ++ G A+KL D+M + GI D YT++I C+ G +
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F ++ E+G+ P + ALI+G CK + A L EMQS+G +V +N +I
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
G + + AS ++ M +KGF D
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQAD 433
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G DV T + F R D AK+ L +M + G+ + YT +I CK G + A
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +G+ P+ I+ N +I +CK ++ EA +L M++ G PD TY +I G
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
+ + A R++ +M KG + ++IS S+ S
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 590
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI DV +T L+ R+G+ A L D++T+ G+SP Y +I +CK G++G A
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M +G+ + N LI+G+C+ V EA +Y+ M+ +G D T N I
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
K+ A + +MME G L + LI ++
Sbjct: 444 FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEG 483
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+ T+ ++ A++++ + +L M K G+ +++ YT ++ K+GK+ A
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M E+GI DV +LI+ C+ + A L++E+ +G P TY +I G
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ ++ A + +M KG + + LI R
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCR 411
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P T+ L++ + G A+ L+++M G++ ++ + T+I C+ G + A
Sbjct: 359 GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA 418
Query: 62 HTIFCDMVEQGIPPDVISCNA-----------------------------------LING 86
I+ M ++G DV +CN LI+
Sbjct: 419 SMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDV 478
Query: 87 FCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
+CK V EA +L+ EM S+G P+ +TYN++I + K+ A ++ M G D
Sbjct: 479 YCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPD 538
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ V + TI+VE R G + +KKL+ + + GI P+ Y TII K
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ M + G+ + ++ L+ K+ ++S+A +L++EM+ RG D Y +I
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 121 GLIVEKKLSVASRVWGQMMEKGFT 144
+ + A ++ ++ EKG +
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLS 361
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 66/150 (44%)
Query: 12 ILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQ 71
++ ++ G + ++ D M K G+S D + K +I L IF MV+
Sbjct: 159 LVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDS 218
Query: 72 GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVA 131
G+ V S ++ G C+ V ++ +L +E +G P+ TYN II + ++ S
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 132 SRVWGQMMEKGFTLDRANSEILISANSRDA 161
V M + G ++ +L+ + ++
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNG 308
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%)
Query: 24 DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNAL 83
D+ ++ +M G+ T ++ LC+ G++ + + + +GI P+ + N +
Sbjct: 206 DLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTI 265
Query: 84 INGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
IN + K S + + M+ G ++VTY L++ + K+S A +++ +M E+G
Sbjct: 266 INAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGI 325
Query: 144 TLDRANSEILISANSR 159
D LIS N R
Sbjct: 326 ESDVHVYTSLISWNCR 341
>AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20791817-20793250 REVERSE
Length = 477
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P V+ FT L++ R G + K +D+ K+G +PD + YT +I G++ A
Sbjct: 322 GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKA 381
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M E+G P+V + N++I GFC + + EA L +EM+SRG P+ V Y+ ++
Sbjct: 382 EEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNN 441
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L K+ A V M+EKG
Sbjct: 442 LKNAGKVLEAHEVVKDMVEKG 462
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 72/142 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PDV+T+ I++ A R G +D +LLD+M K G SPD Y ++ HL K
Sbjct: 251 DGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLA 310
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M E G+ P VI LI+G ++ ++ +E G PD V Y ++I
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT 370
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
G I +L A ++ +M EKG
Sbjct: 371 GYISGGELEKAEEMFKEMTEKG 392
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PD+ T+ IL+ A LL+ M ++G+ P I +TT+I L ++GK+
Sbjct: 286 DGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEA 345
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ V+ G PDV+ +I G+ + +A ++++EM +G P+ TYN +IR
Sbjct: 346 CKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIR 405
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
G + K A + +M +G
Sbjct: 406 GFCMAGKFKEACALLKEMESRG 427
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 59/108 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVV +T+++ ++ G + A+++ +MT+ G P+ Y ++I C +GK A
Sbjct: 357 GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEA 416
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY 109
+ +M +G P+ + + L+N + +V EA ++ ++M +G Y
Sbjct: 417 CALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHY 464
>AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2321740-2324382 REVERSE
Length = 880
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 83/160 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P T+T+L++A G D A L D+M G P+ YT +I LC+ GKI A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + MV+ I P VI+ NALING+CK RV A +L M+ R P+ T+N ++ G
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L K A + +M++ G + D + +LI R+
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P V+T+ L+ + ++G A +LL M K P+ + ++ LC+ GK A
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M++ G+ PD++S N LI+G C+ ++ A +L M PD +T+ II
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILIS-----ANSRDA 161
+ K VAS G M+ KG +LD LI +RDA
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+V T+T+L++ R+G + A + +M K I P I Y +I CK G++ A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M ++ P+V + N L+ G C+ + +A+ L + M G PD V+YN++I G
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 122 LIVEKKLSVASRVWGQM 138
L E ++ A ++ M
Sbjct: 451 LCREGHMNTAYKLLSSM 467
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ PD+V++ +L++ REG + A KLL M I PD + +T II CK GK +
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS----RGPYPDEVTYN 116
A M+ +GI D ++ LI+G CK + +A+ + E + P+ V +
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 117 LIIRGLIVEKKLSVASRV 134
++ +G V+++L++ ++
Sbjct: 555 MLSKGCKVKEELAMLGKI 572
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Query: 29 LLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFC 88
+L ++ K+G+ P + YTT++ L +SG I + I M G P+V +ING C
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC 627
Query: 89 KSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL-DR 147
+ RV EA +L MQ G P+ VTY ++++G + KL A M+E+G+ L DR
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDR 687
Query: 148 ANSEIL 153
S +L
Sbjct: 688 IYSSLL 693
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+ V+++IL+ G + A L DQM + G P YT +I LC G I A +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F +M+ +G P+V + LI+G C+ ++ EA + +M +P +TYN +I G
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 71/140 (50%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PD +TFT ++ AF ++G +D+A L M + GIS D + TT+I +CK GK A
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
I +V+ I S N +++ K +V E + + ++ G P VTY ++ GL
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 123 IVEKKLSVASRVWGQMMEKG 142
I ++ + R+ M G
Sbjct: 592 IRSGDITGSFRILELMKLSG 611
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 69/126 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P VVT+T LV+ +R G + ++L+ M G P+ YT II LC+ G++ A
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M + G+ P+ ++ ++ G+ + ++ A++ M RG ++ Y+ +++G
Sbjct: 636 EKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Query: 122 LIVEKK 127
++ +K
Sbjct: 696 FVLSQK 701
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTK-MGISPDRIFYTTIIGHLCKSGKIGL 60
G + D T L+ F R + A K+ D M+K + +P+ + Y+ +I LC+ G++
Sbjct: 225 GFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEE 284
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M E+G P + LI C + +A L++EM RG P+ TY ++I
Sbjct: 285 AFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLID 344
Query: 121 GLIVEKKLSVASRVWGQMME 140
GL + K+ A+ V +M++
Sbjct: 345 GLCRDGKIEEANGVCRKMVK 364
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G + ++ + +V A + G ++ A+ + ++ K+G D T+++ C+ +
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD 248
Query: 61 AHTIFCDMVEQGI--PPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A +F D++ + + P+ +S + LI+G C+ R+ EA L ++M +G P TY ++
Sbjct: 249 ALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 119 IRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
I+ L + A ++ +M+ +G + +LI RD
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDG 350
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 32 QMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSF 91
+M G I Y TI+ LCK+G A +++ G D +L+ GFC+
Sbjct: 185 RMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGL 244
Query: 92 RVSEAMQLYEEMQSR-GPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANS 150
+ +A+++++ M P+ V+Y+++I GL +L A + QM EKG
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 151 EILISA 156
+LI A
Sbjct: 305 TVLIKA 310
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G LP+V +TI++ + G + A+KLL M G+SP+ + YT ++ +GK+
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGF 87
A MVE+G + ++L+ GF
Sbjct: 670 ALETVRAMVERGYELNDRIYSSLLQGF 696
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 83/146 (56%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD++T+ IL++ G+ + A + + M K + D + YTT+I LCK+GK+
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+FC + +G+ P+V++ +++GFC+ EA L+ EM+ GP P+ TYN +IR
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR 539
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
+ + + ++ + +M GF D
Sbjct: 540 ARLRDGDEAASAELIKEMRSCGFAGD 565
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 78/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VTFT LV + + A L+++M G PD + Y +I LCK G+ LA
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M + I DV+ N +I+G CK + +A L+ +M+++G PD TYN +I
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + S ASR+ M+EK D LI A
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
P +V F+ L+ A + D+ L +QM +GIS + Y+ I + C+ ++ LA
Sbjct: 72 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA 131
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
I M++ G P +++ N+L+NGFC R+SEA+ L ++M G PD VT+ ++ GL
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 124 VEKKLSVASRVWGQMMEKG 142
K S A + +M+ KG
Sbjct: 192 QHNKASEAVALVERMVVKG 210
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT+ ++ + G D+A LL++M K I D + Y TII LCK + A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M +GI PDV + N LI+ C R S+A +L +M + PD V +N +I
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 122 LIVEKKLSVASRVWGQMME 140
+ E KL A +++ +M++
Sbjct: 330 FVKEGKLVEAEKLYDEMVK 348
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTK-MGISPDRIFYTTIIGHLCKSGKIGLA 61
I PD+V F L++AF++EG A+KL D+M K PD + Y T+I CK ++
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M ++G+ + ++ LI+GF ++ A ++++M S G +PD +TYN+++ G
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + A V+ M ++ LD +I A
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 73/154 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P +VT L+ F A L+DQM +MG PD + +TT++ L + K A
Sbjct: 140 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 199
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MV +G PD+++ A+ING CK A+ L +M+ D V YN II G
Sbjct: 200 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDG 259
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
L K + A ++ +M KG D LIS
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI ++ T++I + F R +A +L +M K+G P + +++ C +I A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE G PD ++ L++G + + SEA+ L E M +G PD VTY +I G
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L + +A + + MEKG
Sbjct: 225 LCKRGEPDLALNLLNK-MEKG 244
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+VT+T ++EA + G + L ++ G+ P+ + YTT++ C+ G A +F
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+M E G P+ + N LI + + + +L +EM+S G D T+ L+ L
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 87/153 (56%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PD+ T+ IL+ +F R G D A + +++ + PD I Y ++I L K+G +
Sbjct: 471 DGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDE 530
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
AH F +M E+G+ PDV++ + L+ F K+ RV A L+EEM +G P+ VTYN+++
Sbjct: 531 AHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD 590
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEIL 153
L + + A ++ +M ++G T D +L
Sbjct: 591 CLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 72/116 (62%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD++++ L+ + G D A +M + G++PD + Y+T++ K+ ++ +A+++
Sbjct: 510 PDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSL 569
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
F +M+ +G P++++ N L++ K+ R +EA+ LY +M+ +G PD +TY ++ R
Sbjct: 570 FEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLER 625
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ D + + + A + L ++M K G SPD Y +I + G++ A
Sbjct: 437 GVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEA 496
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF ++ PD+IS N+LIN K+ V EA ++EMQ +G PD VTY+ ++
Sbjct: 497 INIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMEC 556
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+++ +A ++ +M+ KG
Sbjct: 557 FGKTERVEMAYSLFEEMLVKG 577
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
++ ++E+ G + A ++L ++ + G+ D + Y T+ L K +I H +F M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
+ G PD+ + N LI F + V EA+ ++EE++ PD ++YN +I L +
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 129 SVASRVWGQMMEKGFTLD 146
A + +M EKG D
Sbjct: 529 DEAHVRFKEMQEKGLNPD 546
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+ + +L++A ++ + A ++ + M K D YT +I + + GK A +F
Sbjct: 237 DIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLF 293
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+M+ +G+ +V+ N L+ K V +A+Q++ M G P+E TY+L++ L+ E
Sbjct: 294 NEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAE 353
Query: 126 KKL 128
+L
Sbjct: 354 GQL 356
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
++ LV + G A +L M + +R Y +++ LC +GK A + +
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
E+G+ D + N + + K ++S L+E+M+ GP PD TYN++I
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 2 GILPDVVTFTILVEAFLREGS-------SDIAKKLLDQMTKMGISPDRIFYTTIIGHLCK 54
G P+ T+++L+ + EG +I+K+ + Q GI Y+ ++ L K
Sbjct: 335 GCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQ----GI------YSYLVRTLSK 384
Query: 55 SGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
G + AH +FCDM + + S +++ C + + EA+++ ++ +G D +
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 115 YNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
YN + L K++S ++ +M + G + D ILI++ R
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGR 489
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
++ T IL+ F G+++ + L + K + + Y ++ +S A ++
Sbjct: 170 NISTVNILIGFF---GNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVY 226
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
C++ G D+ + N L++ K +A Q++E+M+ R DE TY ++IR +
Sbjct: 227 CEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRI 283
Query: 126 KKLSVASRVWGQMMEKGFTLD 146
K A ++ +M+ +G TL+
Sbjct: 284 GKCDEAVGLFNEMITEGLTLN 304
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+V+TFT L++AF++ G AK+L + M +M + PD Y ++I LC G + A
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F M G P+ + LI+GFCKS RV + M+++ EM +G + +TY ++I+G
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373
Query: 123 IVEKKLSVASRVWGQMMEK 141
+ + VA V+ QM +
Sbjct: 374 CLVGRPDVAQEVFNQMSSR 392
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P+VVT+ LV G A LL M K I P+ I +T +I K GK+
Sbjct: 217 NGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLME 276
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ M++ + PDV + +LING C + EA Q++ M+ G YP+EV Y +I
Sbjct: 277 AKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH 336
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
G K++ +++ +M +KG + +LI
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ PDV T+ L+ G D A+++ M + G P+ + YTT+I CKS ++
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
IF +M ++G+ + I+ LI G+C R A +++ +M SR PD TYN+++ GL
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
K+ A ++ M ++ ++ I+I
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+VVT+T L+ + + A +L +QM G P+ + Y ++ LC+ G+ G A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DM+++ I P+VI+ ALI+ F K ++ EA +LY M YPD TY +I G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L + L A +++ M G
Sbjct: 303 LCMYGLLDEARQMFYLMERNG 323
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VTFT L+ + + A L DQ+ MG P+ + YTT+I LCK+ + A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M G P+V++ NAL+ G C+ R +A L +M R P+ +T+ +I
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 122 LIVEKKLSVASRVWGQMME 140
+ KL A ++ M++
Sbjct: 268 FVKVGKLMEAKELYNVMIQ 286
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 81/159 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P+ V +T L+ F + + K+ +M++ G+ + I YT +I C G+ +
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F M + PPD+ + N L++G C + +V +A+ ++E M+ R + VTY +II+
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
G+ K+ A ++ + KG + +IS R
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + +T+T+L++ + G D+A+++ +QM+ PD Y ++ LC +GK+ A
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF M ++ + ++++ +I G CK +V +A L+ + S+G P+ +TY +I G
Sbjct: 418 LMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
+ A ++ +M E GF
Sbjct: 478 FCRRGLIHEADSLFKKMKEDGF 499
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP ++ FT L+ + D+ L +QM +GI P ++ +C S + A
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
M++ G PD+++ +L+NG+C R+ +A+ L++++ G P+ VTY +IR L
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 124 VEKKLSVASRVWGQMMEKG 142
+ L+ A ++ QM G
Sbjct: 200 KNRHLNHAVELFNQMGTNG 218
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 63/111 (56%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+ T+ +L++ G + A + + M K + + + YT II +CK GK+ A +
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY 115
FC + +G+ P+VI+ +I+GFC+ + EA L+++M+ G P+E Y
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P + T I++ A L +M K+G PD + +T+++ C +I A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F ++ G P+V++ LI CK+ ++ A++L+ +M + G P+ VTYN ++ G
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 122 LIVEKKLSVASRVWGQMMEK 141
L + A+ + MM++
Sbjct: 233 LCEIGRWGDAAWLLRDMMKR 252
>AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025) |
chr4:10868400-10870382 REVERSE
Length = 660
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LPD T+ L++ +E D A LLD+M G SP + Y +I LCK G +
Sbjct: 219 LPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK 278
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ +M +G P+ ++ N LI+G C ++ +A+ L E M S P++VTY +I GL+
Sbjct: 279 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+++ + A R+ M E+G+ L++ +LIS
Sbjct: 339 KQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G LP+ T++ L++ F + G + A ++ +M K G S ++ Y+ +I LC G++
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM---QSRGPYPDEVTYNL 117
A ++ M+ GI PD ++ +++I G C + A++LY EM + PD VTYN+
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
Query: 118 IIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
++ GL ++K +S A + M+++G D
Sbjct: 546 LLDGLCMQKDISRAVDLLNSMLDRGCDPD 574
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P V + +L++ ++G KL+D M G P+ + Y T+I LC GK+ A
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 311
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ MV P+ ++ LING K R ++A++L M+ RG + ++ Y+++I G
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L E K A +W +M EKG + +L+ R+
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
+++L+ +EG ++ A L +M + G P+ + Y+ ++ LC+ GK A I M+
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
G P+ + ++L+ GF K+ EA+Q+++EM G ++ Y+++I GL ++
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 130 VASRVWGQMMEKGFTLDR-ANSEI---LISANSRDAA 162
A VW +M+ G D A S I L S DAA
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
+P+ VT+ L+ +++ + A +LL M + G ++ Y+ +I L K GK A +
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMS 383
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
++ M E+G P+++ + L++G C+ + +EA ++ M + G P+ TY+ +++G
Sbjct: 384 LWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
A +VW +M + G + ++ +LI
Sbjct: 444 KTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
I P+ ++F ++++A + D A ++ M + PD Y T++ LCK +I A
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M +G P + N LI+G CK ++ +L + M +G P+EVTYN +I G
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 122 LIVEKKLSVASRVWGQMM 139
L ++ KL A + +M+
Sbjct: 302 LCLKGKLDKAVSLLERMV 319
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTK----MGISPDRIFYTTIIGHLCKSGKIGLAH 62
V +F ++ + EG + D + M ISP+ + + +I LCK + A
Sbjct: 148 VKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAI 207
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F M E+ PD + L++G CK R+ EA+ L +EMQS G P V YN++I GL
Sbjct: 208 EVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ L+ +++ M KG + LI
Sbjct: 268 CKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +P+ VT+ L+ +G D A LL++M P+ + Y T+I L K + A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E+G + + LI+G K + EAM L+ +M +G P+ V Y++++ G
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L E K + A + +M+ G
Sbjct: 407 LCREGKPNEAKEILNRMIASG 427
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
+++L++ G A + +M +GI PD + Y++II LC G + A ++ +M+
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 70 EQGIP---PDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
Q P PDV++ N L++G C +S A+ L M RG PD +T N + L
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQM---TKMGISPDRIFYTTIIGHLCKSGKI 58
GI PD V ++ +++ GS D A KL +M + PD + Y ++ LC I
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFC---------KSF------------RVSEAM 97
A + M+++G PDVI+CN +N +SF RVS A
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGAC 616
Query: 98 QLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVA-SRVWGQM 138
+ E M + P T+ +I+R + KK++ A + W +
Sbjct: 617 TIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCWRNL 658
>AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:360918-363050 REVERSE
Length = 710
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD TF L+ F + D A ++ M +PD + Y TII LC++GK+ +A
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 62 HTIFCDMVEQG--IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
H + M+++ + P+V+S L+ G+C + EA+ ++ +M SRG P+ VTYN +I
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 120 RGL 122
+GL
Sbjct: 324 KGL 326
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
F L+ ++ G + KL M +MGISP + + +++ L K G+ G+AH +F +M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 70 EQ-GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
G+ PD + N LINGFCK+ V EA +++++M+ PD VTYN II GL K+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 129 SVASRVWGQMMEKG 142
+A V M++K
Sbjct: 261 KIAHNVLSGMLKKA 274
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 39/191 (20%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMG--ISPDRIFYTTIIGHLCKSGKIGLAH 62
PDVVT+ +++ R G IA +L M K + P+ + YTT++ C +I A
Sbjct: 242 PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAV 301
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSE--------------------------- 95
+F DM+ +G+ P+ ++ N LI G ++ R E
Sbjct: 302 LVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIK 361
Query: 96 ----------AMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
AM++++EM + +PD +Y+++IR L + + A ++ ++ EK L
Sbjct: 362 AHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLL 421
Query: 146 DRANSEILISA 156
+ + L +A
Sbjct: 422 GKDECKPLAAA 432
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD TF IL++A G D A K+ +M M + PD Y+ +I LC + A T+
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 65 FCDMVEQGI-------PPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNL 117
F ++ E+ + P + N + C + + +A +++ ++ RG D +Y
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKT 469
Query: 118 IIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+I G E K A + M+ + F D E+LI
Sbjct: 470 LITGHCREGKFKPAYELLVLMLRREFVPDLETYELLI 506
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 48 IIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG 107
++G+LC++ K+ AHT+ +E+ D+ +CN +I G CK R SEA LY E+ G
Sbjct: 607 LLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
Query: 108 PYPDEVTYNLIIRG 121
+ +++ ++++R
Sbjct: 667 NH-QQLSCHVVLRN 679
>AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29920334-29922676 REVERSE
Length = 780
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P++ TF IL++ ++G + A+K+ D MT GISP+R+ YT +I LC+ G A +
Sbjct: 196 PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKL 255
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M G PD ++ NAL++GFCK R+ EA +L + G Y+ +I GL
Sbjct: 256 FYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
++ + A ++ M++K D ILI S+
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK 350
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+ VT+TIL+ + GS+D A+KL +M G PD + + ++ CK G++ A
Sbjct: 228 GISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEA 287
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + G + ++LI+G ++ R ++A +LY M + PD + Y ++I+G
Sbjct: 288 FELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQG 347
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L K+ A ++ M KG + D +I A
Sbjct: 348 LSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKA 382
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PD++ +TIL++ + G + A KLL M GISPD Y +I LC G +
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGR 393
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
++ +M E PD + LI C++ V EA +++ E++ G P T+N +I GL
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453
Query: 123 IVEKKLSVASRVWGQMMEKG 142
+L A R+ ME G
Sbjct: 454 CKSGELKEA-RLLLHKMEVG 472
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 5 PDVVTFTILVEAFLREGSSD-IAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
PDV T+ +++ +RE +A + ++M K SP+ + ++ L K G+ A
Sbjct: 160 PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQK 219
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+F DM +GI P+ ++ LI+G C+ +A +L+ EMQ+ G YPD V +N ++ G
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC 279
Query: 124 VEKKLSVASRVWGQMMEKGFTL 145
++ A + + GF L
Sbjct: 280 KLGRMVEAFELLRLFEKDGFVL 301
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 39/158 (24%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
PD T TIL+ + R G A+++ ++ K G SP + +I LCKSG++ A
Sbjct: 405 FPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARL 464
Query: 64 I-----------------------FCDMVEQGI----------------PPDVISCNALI 84
+ F MVE G PD++S N LI
Sbjct: 465 LLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLI 524
Query: 85 NGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
NGFC++ + A++L +Q +G PD VTYN +I GL
Sbjct: 525 NGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G + + ++ L++ R A +L M K I PD I YT +I L K+GKI
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIED 356
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M +GI PD NA+I C + E L EM +PD T+ ++I
Sbjct: 357 ALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC 416
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ + A ++ ++ + G + A LI
Sbjct: 417 SMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
+F +VE+ GS A + L G SPD + Y +I C++G I A + +
Sbjct: 488 SFDTMVES----GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVL 543
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
+G+ PD ++ N LING + R EA +L+ P Y ++ ++K+
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRSLMTWSCRKRKV 601
Query: 129 SVASRVWGQMMEKGFTLD 146
VA +W + ++K LD
Sbjct: 602 LVAFNLWMKYLKKISCLD 619
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+V++ +L+ F R G D A KLL+ + G+SPD + Y T+I L + G+ A
Sbjct: 512 GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
+F + P V +L+ C+ +V A L+ + + D+ T N I
Sbjct: 572 FKLFYAKDDFRHSPAVY--RSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEI 626
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P +VT+ L+ A+ R+G D A +L +QM + G PD YTT++ ++GK+
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES 402
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +IF +M G P++ + NA I + + +E M++++E+ G PD VT+N ++
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
S S V+ +M GF +R LISA SR
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+ T +V + R A +LD M + G +P Y +++ +S G +
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I +++ +GI PD+IS N +I +C++ R+ +A +++ EM++ G PD +TYN I
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ A V M++ G
Sbjct: 744 YAADSMFEEAIGVVRYMIKHG 764
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSS-DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG 59
+G P ++T+ +++ F + G+ + L+++M GI+PD Y T+I CK G +
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLH 295
Query: 60 L-AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A +F +M G D ++ NAL++ + KS R EAM++ EM G P VTYN +
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 119 IRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
I + L A + QM EKG D L+S R
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 396
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI PD T+ L+ R A ++ ++M G S D++ Y ++ KS +
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +MV G P +++ N+LI+ + + + EAM+L +M +G PD TY ++
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
G K+ A ++ +M G
Sbjct: 393 GFERAGKVESAMSIFEEMRNAG 414
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G D VT+ L++ + + A K+L++M G SP + Y ++I + G + A
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ M E+G PDV + L++GF ++ +V AM ++EEM++ G P+ T+N I+
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDV T+T L+ F R G + A + ++M G P+ + I GK
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF ++ G+ PD+++ N L+ F ++ SE +++EM+ G P+ T+N +I
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
A V+ +M++ G T D + +++A +R
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 7/165 (4%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G DV ++T L+ AF G A + +M + G P I Y I+ GK+G
Sbjct: 202 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVF---GKMGT 258
Query: 61 AHTIFCDMVEQ----GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYN 116
+VE+ GI PD + N LI + EA Q++EEM++ G D+VTYN
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 117 LIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
++ + A +V +M+ GF+ LISA +RD
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDG 363
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P + T+ L+ R ++++L ++ GI PD I Y T+I C++ ++ A
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF +M GI PDVI+ N I + EA+ + M G P++ TYN I+ G
Sbjct: 719 SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD+ T+ ++ A R G + ++K+L +M P+ + Y +++ +IGL
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
H++ ++ I P + L+ K + EA + + E++ RG PD T N ++
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ ++ A+ V M E+GFT A L+ +SR A
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D I++ +EG A + + + + G S D YT++I SG+ A +F
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 66 CDMVEQGIPPDVISCNALINGFCK-SFRVSEAMQLYEEMQSRGPYPDEVTYNLII----R 120
M E G P +I+ N ++N F K ++ L E+M+S G PD TYN +I R
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
G + ++ A++V+ +M GF+ D+ L+
Sbjct: 292 GSLHQE----AAQVFEEMKAAGFSYDKVTYNALL 321
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD++++ ++ A+ R A ++ +M GI PD I Y T IG A
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY 109
+ M++ G P+ + N++++G+CK R EA E++++ P+
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPH 801
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD+VT+ L+ F + G + +M + G P+R + T+I + G A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
T++ M++ G+ PD+ + N ++ + ++ ++ EM+ P+E+TY ++
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 122 LIVEKKL----SVASRVWGQMME 140
K++ S+A V+ ++E
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIE 591
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 64/136 (47%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
A++ ++ + G SPD +++ + + A+ + M E+G P + + N+L+
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
+S ++ ++ E+ ++G PD ++YN +I ++ ASR++ +M G
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 146 DRANSEILISANSRDA 161
D I + + D+
Sbjct: 733 DVITYNTFIGSYAADS 748
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 93.2 bits (230), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 83/141 (58%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+VVTF L+ F + G D A L M + GI PD I Y+T+I K+G +G+
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
H +F + +G+ DV+ ++ I+ + KS ++ A +Y+ M +G P+ VTY ++I+G
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L + ++ A ++GQ++++G
Sbjct: 401 LCQDGRIYEAFGMYGQILKRG 421
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD++ ++ L++ + + G + KL Q G+ D + +++ I KSG + A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ M+ QGI P+V++ LI G C+ R+ EA +Y ++ RG P VTY+ +I G
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L ++ M++ G+ D +L+ S+
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 81/145 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ DVV F+ ++ +++ G A + +M GISP+ + YT +I LC+ G+I A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ ++++G+ P +++ ++LI+GFCK + LYE+M G PD V Y +++ G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L + + A R +M+ + L+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLN 495
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 35/199 (17%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
GI P+VVT+TIL++ ++G A + Q+ K G+ P + Y+++I CK G +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 61 AHTIFCDMVEQGIPPD-----------------------------------VISCNALIN 85
++ DM++ G PPD V+ N+LI+
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
G+C+ R EA++++ M G PD T+ ++R I+E +L A ++ +M + G
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 146 DRANSEILISANSRDAAST 164
D LI A + T
Sbjct: 565 DALAYCTLIDAFCKHMKPT 583
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 74/153 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDV TFT ++ + EG + A L +M KMG+ PD + Y T+I CK K +
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M I D+ CN +I+ K R+ +A + + + PD VTYN +I G
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
++L A R++ + F + ILI
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+ VT TIL+ + D A ++ M + G P+ + Y ++ KS I + +
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M E+GI P ++S + +I+G CK RV EA ++ + PD V Y ++IRG
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 125 EKKLSVASRVWGQMMEKGFT----LDRANSE 151
+L A+ ++ M+ G L RA SE
Sbjct: 789 VGRLVEAALLYEHMLRNGVKPDDLLQRALSE 819
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ VT+ L++ F + + + KL ++M + GISP + Y+ II LCK G++ A
Sbjct: 701 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEV 113
IF ++ + PDV++ LI G+CK R+ EA LYE M G PD++
Sbjct: 761 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+VT+ ++ + D A+++ + + P+ + T +I LCK+ + A +
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M E+G P+ ++ L++ F KS + + +L+EEMQ +G P V+Y++II GL
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILI 154
++ A+ ++ Q ++ D ILI
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 73/138 (52%)
Query: 24 DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNAL 83
++A +LL + G +P+ + + T+I CK G++ A +F M ++GI PD+I+ + L
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 84 INGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
I+G+ K+ + +L+ + +G D V ++ I + L+ AS V+ +M+ +G
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 144 TLDRANSEILISANSRDA 161
+ + ILI +D
Sbjct: 388 SPNVVTYTILIKGLCQDG 405
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+VV F L++ + R D A K+ M GI PD +TT++ G++ A +F
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M + G+ PD ++ LI+ FCK + + +QL++ MQ D N++I L
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 126 KKLSVASRVWGQMME 140
++ AS+ + ++E
Sbjct: 615 HRIEDASKFFNNLIE 629
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 57 KIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYN 116
+I +A + +++ G P+V++ LINGFCK + A L++ M+ RG PD + Y+
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 117 LIIRGLIVEKKLSVASRVWGQMMEKGFTLDRA--NSEILISANSRDAAST 164
+I G L + +++ Q + KG LD +S I + S D A+
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P +V+++I+++ + G D A + Q + PD + Y +I CK G++ A
Sbjct: 736 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPD 111
++ M+ G+ PD + AL + +S+ + ++++ P PD
Sbjct: 796 ALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVHDK-----PMPD 840
>AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22180231-22181652 REVERSE
Length = 473
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P V+ +T L++ R G+ + K LD+M K G PD + YT +I SG++ A
Sbjct: 319 GIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKA 378
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M +G P+V + N++I G C + EA L +EM+SRG P+ V Y+ ++
Sbjct: 379 KEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSY 438
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L KLS A +V +M++KG
Sbjct: 439 LRKAGKLSEARKVIREMVKKG 459
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PDV+T+ IL+ R G D +L D+M + G SPD Y ++ L K K
Sbjct: 248 DGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLA 307
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A T M E GI P V+ LI+G ++ + +EM G PD V Y ++I
Sbjct: 308 ALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMIT 367
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
G +V +L A ++ +M KG
Sbjct: 368 GYVVSGELDKAKEMFREMTVKG 389
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PD T+ IL+ + A L+ M ++GI P + YTT+I L ++G +
Sbjct: 283 DGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEA 342
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+MV+ G PDV+ +I G+ S + +A +++ EM +G P+ TYN +IR
Sbjct: 343 CKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 402
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
GL + + A + +M +G
Sbjct: 403 GLCMAGEFREACWLLKEMESRG 424
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVV +T+++ ++ G D AK++ +MT G P+ Y ++I LC +G+ A
Sbjct: 354 GCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 413
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY 109
+ +M +G P+ + + L++ K+ ++SEA ++ EM +G Y
Sbjct: 414 CWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHY 461
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTK---MGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
TF +L+ + G + +AK+ + Q K P + Y I+ L + L ++
Sbjct: 186 TFNLLICSC---GEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVY 242
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M+E G PDV++ N L+ + ++ +L++EM G PD TYN+++ L
Sbjct: 243 KQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKG 302
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
K A M E G + LI SR
Sbjct: 303 NKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 92.8 bits (229), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 76/127 (59%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+V TIL+++ + G+ A ++ +M++ + D + Y II LC SG + A+
Sbjct: 264 DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFM 323
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
CDMV++G+ PDV + N LI+ CK + EA L+ MQ+ G PD+++Y +II+GL +
Sbjct: 324 CDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIH 383
Query: 126 KKLSVAS 132
++ A+
Sbjct: 384 GDVNRAN 390
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 35/180 (19%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PDV T+ L+ A +EG D A L M G++PD+I Y II LC G + A
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 62 H-----------------------------------TIFCDMVEQGIPPDVISCNALING 86
+ ++ M+ G+ P+V + NALI+G
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449
Query: 87 FCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
+ K R+ +A + EM+S +PD TYNL++ L +A +++ +M+ +G D
Sbjct: 450 YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG-- 59
G P+ V++ L++ + D A L + M K GI P+R+ I+ LC+ G IG
Sbjct: 186 GPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNN 245
Query: 60 ---LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYN 116
L I D + P D++ C L++ K+ V +A+++++EM + D V YN
Sbjct: 246 NKKLLEEIL-DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 117 LIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+IIRGL + A M+++G D LISA
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISA 344
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+V+ + ++++ + R G + A +L+ M G+ P+ +I K G++ A +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+M I PD + N L+ C + A QLY+EM RG PD +TY ++RGL
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ +L A + ++ G T+D IL +R
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTR 557
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Query: 2 GILPDVVTFTILVEAFLREGS-SDIAKKLLDQM--TKMGISPDRIFYTTIIGHLC-KSGK 57
GI P+ VT I+V A ++G + KKLL+++ + +P I TI+ C K+G
Sbjct: 221 GIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGN 280
Query: 58 IGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNL 117
+ A ++ +M ++ +P D + N +I G C S + A +M RG PD TYN
Sbjct: 281 VVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNT 340
Query: 118 IIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+I L E K A + G M G D+ + +++I
Sbjct: 341 LISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQG 379
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 61/112 (54%)
Query: 45 YTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQ 104
+++I+ LC GK+ A + M+ G+ P +I+ N L+NG CK+ + +A L EM+
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 105 SRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
GP P+ V+YN +I+GL + A ++ M + G +R I++ A
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHA 235
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%)
Query: 20 EGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVIS 79
+G D A L +M G+ P I + ++ LCK+G I A + +M E G P+ +S
Sbjct: 134 QGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVS 193
Query: 80 CNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
N LI G C V +A+ L+ M G P+ VT N+I+ L
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHAL 236
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D V + +++ G+ A + M K G++PD Y T+I LCK GK A +
Sbjct: 299 DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLH 358
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M G+ PD IS +I G C V+ A + M P+ + +N++I G
Sbjct: 359 GTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRY 418
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILI 154
S A V M+ G + + LI
Sbjct: 419 GDTSSALSVLNLMLSYGVKPNVYTNNALI 447
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PD T+ +L+ A G +A +L D+M + G PD I YT ++ LC G++ A
Sbjct: 471 IHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAE 530
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEE 102
++ + GI D + L + + R EA +Y++
Sbjct: 531 SLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKK 570
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 92.8 bits (229), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ + IL+ F + G +D A L +M K G+ PD Y+ ++ LC G++
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQ-SRGPYPDEVTYNLIIR 120
F ++ E G+ PDV+ N +ING KS R+ EA+ L+ EM+ SRG PD TYN +I
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 121 GLIVEKKLSVASRVWGQMMEKGF 143
L + + A +++ ++ G
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGL 1063
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 84/145 (57%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++PD VT+ ++++ + + G D A KLL +M + G PD I ++I L K+ ++ A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M E + P V++ N L+ G K+ ++ EA++L+E M +G P+ +T+N +
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L ++++A ++ +MM+ G D
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPD 642
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG PDV+ L+ + D A K+ +M +M + P + Y T++ L K+GKI
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F MV++G PP+ I+ N L + CK+ V+ A+++ +M G PD TYN II
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 121 GLIVEKKLSVASRVWGQM 138
GL+ ++ A + QM
Sbjct: 652 GLVKNGQVKEAMCFFHQM 669
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GILP++ T+ L+ LR D A +L M +G+ P Y I + KSG A
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F M +GI P++++CNA + K+ R EA Q++ ++ G PD VTYN++++
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
++ A ++ +MME G
Sbjct: 513 YSKVGEIDEAIKLLSEMMENG 533
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVVT+T+L++A D AK++ ++M PDR+ Y T++ + +
Sbjct: 288 GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSV 347
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M + G PDV++ L++ CK+ EA + M+ +G P+ TYN +I G
Sbjct: 348 KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG 407
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L+ +L A ++G M G
Sbjct: 408 LLRVHRLDDALELFGNMESLG 428
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P T+ L++ + G AK+L + M G P+ Y +I K+G+ A +
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F MV++G+ PD+ + + L++ C RV E + ++E++ G PD V YNLII GL
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 125 EKKLSVASRVWGQM-MEKGFTLDRANSEILI 154
+L A ++ +M +G T D LI
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P++V + + + G AK++ + +G+ PD + Y ++ K G+I A
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M+E G PDVI N+LIN K+ RV EA +++ M+ P VTYN ++ G
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L K+ A ++ M++KG
Sbjct: 583 LGKNGKIQEAIELFEGMVQKG 603
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P + T++ L+ + D LL +M +G+ P+ +T I L ++GKI A
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ I M ++G PDV++ LI+ C + ++ A +++E+M++ PD VTY ++
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ L + W +M + G D IL+ A
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD VT+ L++ F D K+ +M K G PD + +T ++ LCK+G G A
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
M +QGI P++ + N LI G + R+ +A++L+ M+S G P TY + I
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P VVT+ L+ + G A +L + M + G P+ I + T+ LCK+ ++ LA +
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM 630
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
M++ G PDV + N +I G K+ +V EAM + +M+ + YPD VT ++ G++
Sbjct: 631 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVV 688
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLL-DQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
+ +T I++ ++ G+ D A L D M+ SP Y +I L KSG++ A +
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M++ G P+ N LINGF K+ A L++ M G PD TY++++ L +
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
++ + ++ E G D ++I+
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P T+ + ++ + + G S A + ++M GI+P+ + + L K+G+ A
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF + + G+ PD ++ N ++ + K + EA++L EM G PD + N +I
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 122 LIVEKKLSVASRVWGQMME 140
L ++ A +++ +M E
Sbjct: 548 LYKADRVDEAWKMFMRMKE 566
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 26 AKKLLDQMTK-MGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALI 84
A+ L ++ TK +G+ P Y +IG L ++ I +A +F + G PDV + N L+
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 85 NGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMM 139
+ + KS ++ E +LY+EM + + +T+N++I GL+ + A ++ +M
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P + T+ +L+ L +IA+ + Q+ G PD Y ++ KSGKI
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS-RGPYPDEVTYNLIIR 120
++ +M + I+ N +I+G K+ V +A+ LY ++ S R P TY +I
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS----ANSRDAA 162
GL +L A +++ M++ G + A ILI+ A DAA
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQM-TKMGISPDRIFYTTIIGHLCKSGKIG 59
+G+ PDVV + +++ + + A L ++M T GI+PD Y ++I +L +G +
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY 115
A I+ ++ G+ P+V + NALI G+ S + A +Y+ M + G P+ TY
Sbjct: 1050 EAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G + + ++ L+ L+ A ++ +M G P Y++++ L K I
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M G+ P+V + I ++ +++EA ++ + M G PD VTY ++I
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS--ANSRDAAS 163
L +KL A V+ +M DR L+ +++RD S
Sbjct: 303 LCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ +TF L + + +A K+L +M MG PD Y TII L K+G++ A
Sbjct: 603 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQL 99
F M ++ + PD ++ L+ G K+ + +A ++
Sbjct: 663 MCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
>AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23488884-23489530 REVERSE
Length = 189
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + VT+T L++ + G D+A+++ +M G+ PD + Y ++ LCK+GK+ A
Sbjct: 11 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKA 70
Query: 62 ---------HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDE 112
+FC + +G+ P+V++ +I+GFCK EA L+ +M+ GP PD
Sbjct: 71 LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDS 130
Query: 113 VTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
TYN +IR + + + ++ + +M F D
Sbjct: 131 GTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 164
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 9/143 (6%)
Query: 28 KLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGF 87
+L +M++ G+ + + YTT+I L ++G +A IF +MV G+PPD+++ N L++G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 88 CKSFRVSEAM---------QLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQM 138
CK+ ++ +A+ L+ + +G P+ VTY +I G + A ++ +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 139 MEKGFTLDRANSEILISANSRDA 161
E G D LI A+ RD
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDG 144
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 1 NGILPDVVTFTILVEAFLREGSSD---IAKKLLD------QMTKMGISPDRIFYTTIIGH 51
+G+ PD++T+ IL++ + G + +A K+ D ++ G+ P+ + YTT+I
Sbjct: 45 DGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISG 104
Query: 52 LCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPD 111
CK G A+T+F M E G PD + N LI + + + +L +EM+S D
Sbjct: 105 FCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 164
Query: 112 EVTYNLI 118
TY L+
Sbjct: 165 ASTYGLV 171
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 84/146 (57%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ P+VV+++ LV+AF +EG A K M ++G+ P+ YT++I CK G +
Sbjct: 229 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 288
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +M++ G+ +V++ ALI+G C + R+ EA +L+ +M + G P+ +YN +I
Sbjct: 289 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 348
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
G + K + A + ++ +G D
Sbjct: 349 GFVKAKNMDRALELLNELKGRGIKPD 374
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P V T+ I+++ +EG + A+ L ++M G+ PD + Y ++I K G++
Sbjct: 125 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 184
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F +M + PDVI+ NALIN FCK ++ ++ Y EM+ G P+ V+Y+ ++
Sbjct: 185 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 244
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
E + A + + M G + LI AN +
Sbjct: 245 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 282
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P+ T+T L++A + G+ A +L ++M ++G+ + + YT +I LC + ++ A
Sbjct: 265 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 324
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M G+ P++ S NALI+GF K+ + A++L E++ RG PD + Y I G
Sbjct: 325 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 384
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
L +K+ A V +M E G +ANS I +
Sbjct: 385 LCSLEKIEAAKVVMNEMKECGI---KANSLIYTT 415
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 75/141 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++PD VT+ +++ F + G D ++M M PD I Y +I CK GK+ +
Sbjct: 160 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 219
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M G+ P+V+S + L++ FCK + +A++ Y +M+ G P+E TY +I
Sbjct: 220 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 279
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
LS A R+ +M++ G
Sbjct: 280 NCKIGNLSDAFRLGNEMLQVG 300
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV+T+ L+ F + G I + +M G+ P+ + Y+T++ CK G + A
Sbjct: 198 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 257
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ DM G+ P+ + +LI+ CK +S+A +L EM G + VTY +I GL
Sbjct: 258 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 317
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+++ A ++G+M G + A+ LI
Sbjct: 318 AERMKEAEELFGKMDTAGVIPNLASYNALIHG 349
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ P + L+ F + G +D K+ M G P Y +I +CK G + A
Sbjct: 91 VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 150
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F +M +G+ PD ++ N++I+GF K R+ + + +EEM+ PD +TYN +I
Sbjct: 151 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 210
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
KL + + +M G + + L+ A
Sbjct: 211 CKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 244
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P++ ++ L+ F++ + D A +LL+++ GI PD + Y T I LC KI A
Sbjct: 335 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 394
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M E GI + + L++ + KS +E + L +EM+ VT+ ++I G
Sbjct: 395 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 454
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEI-------LISANSRDAAST 164
L K +S A + + + F L +AN+ I L N +AA+T
Sbjct: 455 LCKNKLVSKAVDYFNR-ISNDFGL-QANAAIFTAMIDGLCKDNQVEAATT 502
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ + FT +++ ++ + A L +QM + G+ PDR YT+++ K G + A
Sbjct: 476 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 535
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEV 113
+ M E G+ D+++ +L+ G ++ +A EEM G +PDEV
Sbjct: 536 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 587
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N +P F L + G + A + +M + + P ++ K GK
Sbjct: 54 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDD 113
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
F DM+ G P V + N +I+ CK V A L+EEM+ RG PD VTYN +I
Sbjct: 114 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 173
Query: 121 GL 122
G
Sbjct: 174 GF 175
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKM----GISPDRIFYTTIIGHLCKSGKIGLAH 62
VVTF +L++ + + + K +D ++ G+ + +T +I LCK ++ A
Sbjct: 445 VVTFCVLIDGLCK---NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 501
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
T+F MV++G+ PD + +L++G K V EA+ L ++M G D + Y ++ GL
Sbjct: 502 TLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 561
Query: 123 IVEKKLSVASRVWGQMMEKGFTLD 146
+L A +M+ +G D
Sbjct: 562 SHCNQLQKARSFLEEMIGEGIHPD 585
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 55/98 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++PD +T L++ ++G+ A L D+M ++G+ D + YT+++ L ++ A
Sbjct: 511 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 570
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQL 99
+ +M+ +GI PD + C +++ + + EA++L
Sbjct: 571 RSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 608
>AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587613-23588220 FORWARD
Length = 152
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 74/129 (57%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P +T+ +++ F ++ D AK++LD M G SPD + ++T+I CK+ ++
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
IFC+M +GI + ++ LI+GFC+ + A L EM S G PD +T++ ++ GL
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 123 IVEKKLSVA 131
+K+L A
Sbjct: 126 CSKKELRKA 134
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%)
Query: 33 MTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFR 92
M + I P I Y ++I CK ++ A + M +G PDV++ + LING+CK+ R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 93 VSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
V M+++ EM RG + VTY +I G L A + +M+ G D
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 114
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 55/103 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVVTF+ L+ + + D ++ +M + GI + + YTT+I C+ G + A
Sbjct: 40 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 99
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQ 104
+ +M+ G+ PD I+ + ++ G C + +A + E++Q
Sbjct: 100 QDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 142
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
M+ I P I+ N++I+GFCK RV +A ++ + M S+G PD VT++ +I G K+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 128 LSVASRVWGQMMEKGFTLDRANSEILI 154
+ ++ +M +G + LI
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLI 87
>AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8362672-8364753 FORWARD
Length = 693
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 84/153 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDV T+ IL+ + + G D A +++ ++ + G P + +T +IG K G A
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ M + + PDV++C+AL++G+CK+ R+ +A+ L+ ++ G PD V YN +I G
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ A + G M+++G + + L+
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 82/142 (57%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+LPD V +T +++ + G +D A + + K G P T +IG + G I A
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++F +M +G+ DV++ N L++G+ K+ ++++ +L +EM+S G PD TYN++I
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
++V + A+ + +++ +GF
Sbjct: 523 MVVRGYIDEANEIISELIRRGF 544
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +P + FT ++ F + G A L M + + PD + + ++ CK+ ++ A
Sbjct: 543 GFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKA 602
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +++ G+ PDV+ N LI+G+C + +A +L M RG P+E T++ ++ G
Sbjct: 603 IVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Query: 122 LIVEKKLSVASRVWGQMM 139
L E K V S M+
Sbjct: 663 L--EGKRFVNSETHASML 678
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 32/177 (18%)
Query: 2 GILPDVVTFTILVE-----AFLREGSSDIAK--------------KLLDQMTKMG----- 37
GI PD+V FT+ ++ FL+E +S + K ++D K+G
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 38 --------ISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCK 89
+ P+ Y++ + ++C +G + A TIF ++ E G+ PD + +I+G+C
Sbjct: 361 IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420
Query: 90 SFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
R +A Q + + G P T ++I +S A V+ M +G LD
Sbjct: 421 LGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 32/186 (17%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+ ++ + + +G D +LL M GI PD + +T I LCK+G + A ++
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQL-------------------------- 99
+ GI D +S +++I+GFCK + EA++L
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDM 389
Query: 100 ------YEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEIL 153
++E+ G PD V Y +I G + A + +G +++ G S IL
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTIL 449
Query: 154 ISANSR 159
I A SR
Sbjct: 450 IGACSR 455
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 16/158 (10%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+VVT+T L+ A+L+ A +L + M G P+ + Y+ +I CK+G++ A
Sbjct: 507 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 566
Query: 62 HTIFCDMV-EQGIP---------------PDVISCNALINGFCKSFRVSEAMQLYEEMQS 105
IF M + +P P+V++ AL++GFCKS RV EA +L + M
Sbjct: 567 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 626
Query: 106 RGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
G P+++ Y+ +I GL KL A V +M E GF
Sbjct: 627 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 664
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 35/197 (17%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N P+VVT+ L++ F + + A+KLLD M+ G P++I Y +I LCK GK+
Sbjct: 592 NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 651
Query: 61 AHTIFCDMVEQGIP-----------------------------------PDVISCNALIN 85
A + +M E G P P+V+ +I+
Sbjct: 652 AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 711
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
G CK + EA +L + M+ +G P+ VTY +I G + K+ + +M KG
Sbjct: 712 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 771
Query: 146 DRANSEILISANSRDAA 162
+ +LI ++ A
Sbjct: 772 NYVTYRVLIDHCCKNGA 788
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G +PD T++ ++ ++A L ++M + G+ D YT ++ CK+G I
Sbjct: 436 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 495
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F +M E G P+V++ ALI+ + K+ +VS A +L+E M S G P+ VTY+ +I
Sbjct: 496 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 555
Query: 121 GLI----VEKKLSVASRVWG 136
G VEK + R+ G
Sbjct: 556 GHCKAGQVEKACQIFERMCG 575
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 83/160 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G + T++ L++ + + D+A K+L +M + +P+ + YT +I LCK GK
Sbjct: 662 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 721
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ + M E+G P+V++ A+I+GF ++ ++L E M S+G P+ VTY ++I
Sbjct: 722 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 781
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRD 160
L VA + +M + + A +I +++
Sbjct: 782 HCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 821
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 73/141 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ + + + G + A ++ +M G PD Y+ ++ +LC + K+ LA
Sbjct: 402 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 461
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M G+ DV + +++ FCK+ + +A + + EM+ G P+ VTY +I
Sbjct: 462 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 521
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ KK+S A+ ++ M+ +G
Sbjct: 522 YLKAKKVSYANELFETMLSEG 542
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+VVT+T +++ F G + +LL++M G++P+ + Y +I H CK+G + +A
Sbjct: 733 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 792
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
H + +M + P +I GF K F E++ L +E+ P Y L+I
Sbjct: 793 HNLLEEMKQTHWPTHTAGYRKVIEGFNKEF--IESLGLLDEIGQDDTAPFLSVYRLLIDN 850
Query: 122 LIVEKKLSVASRVWGQMMEKGFTL 145
LI ++L +A R+ ++ TL
Sbjct: 851 LIKAQRLEMALRLLEEVATFSATL 874
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 6/161 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGK---- 57
G P F LV A+ G A KLL +M K G P + Y +IG +C
Sbjct: 326 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 385
Query: 58 --IGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY 115
+ LA + +M+ G+ + I+ ++ C + + +A + EM +G PD TY
Sbjct: 386 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 445
Query: 116 NLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ ++ L K+ +A ++ +M G D I++ +
Sbjct: 446 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 486
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSS------DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKS 55
G +P V + IL+ + + S D+A+K +M G+ ++I ++ LC +
Sbjct: 361 GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA 420
Query: 56 GKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY 115
GK A ++ +M+ QG PD + + ++N C + ++ A L+EEM+ G D TY
Sbjct: 421 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 480
Query: 116 NLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+++ + A + + +M E G T + LI A
Sbjct: 481 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 521
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P T+ L++AFL+ D A + +M+ + D LCK GK A T+
Sbjct: 192 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 251
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ + PD + LI+G C++ EAM M++ P+ VTY+ ++ G +
Sbjct: 252 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 308
Query: 125 EKKLSVASRVWGQMMEKG 142
+K+L RV MM +G
Sbjct: 309 KKQLGRCKRVLNMMMMEG 326
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
+PD V +T L+ + A L++M P+ + Y+T++ ++G
Sbjct: 256 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 315
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M+ +G P N+L++ +C S S A +L ++M G P V YN++I
Sbjct: 316 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 375
Query: 122 LIVEKK------LSVASRVWGQMMEKGFTLDRAN 149
+ +K L +A + + +M+ G L++ N
Sbjct: 376 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 409
>AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G55840.1); Has
18933 Blast hits to 5737 proteins in 174 species: Archae
- 4; Bacteria - 8; Metazoa - 352; Fungi - 335; Plants -
17540; Viruses - 0; Other Eukaryotes - 694 (source: NCBI
BLink). | chr5:16166444-16168276 FORWARD
Length = 610
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+ TF IL F + + L++M + G PD + Y T++ C+ G++ A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ M + + PD+++ +LI G CK RV EA Q + M RG PD ++YN +I
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
E + + ++ +M+ DR ++++ R+
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREG 390
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT+ LV ++ R G A L M + + PD + YT++I LCK G++ A
Sbjct: 266 GFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREA 325
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
H F MV++GI PD +S N LI +CK + ++ +L EM PD T +I+ G
Sbjct: 326 HQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEG 385
Query: 122 LIVEKKL 128
+ E +L
Sbjct: 386 FVREGRL 392
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 33 MTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFR 92
M ++GI P+ + + C M E+G PD+++ N L++ +C+ R
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 93 VSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEI 152
+ EA LY+ M R PD VTY +I+GL + ++ A + + +M+++G D +
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 153 LISANSRDA 161
LI A ++
Sbjct: 347 LIYAYCKEG 355
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
++PD+VT+T L++ ++G A + +M GI PD + Y T+I CK G + +
Sbjct: 302 VVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSK 361
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS-RGPYPDEVTYNLIIRG 121
+ +M+ + PD +C ++ GF + R+ A+ E++ + P EV + +I
Sbjct: 362 KLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVC-DFLIVS 420
Query: 122 LIVEKKLSVASRVWGQMMEK 141
L E K A + +++E+
Sbjct: 421 LCQEGKPFAAKHLLDRIIEE 440
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 9/153 (5%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
T+ L+E+ R + + A L ++ D Y +IG LC+ G+ A ++ +M
Sbjct: 449 TYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR-----GLI 123
+ + PD C AL+ G+CK +A +L D +YN +++ G
Sbjct: 509 FDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCG 568
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+K L + R M GF +R + LI
Sbjct: 569 YKKALELQER----MQRLGFVPNRLTCKYLIQV 597
>AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6328519-6329970 REVERSE
Length = 483
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTII-GHLCKSGKIGL 60
G PD V +T ++ F +G A+KL +M K G+ P+ Y +I GH K G+I L
Sbjct: 313 GYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHF-KRGEISL 371
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ +M+ G ++SCN +I GFC + EA ++++ M G P+ +TYN +I+
Sbjct: 372 VEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIK 431
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
G E K+ +++ ++ G
Sbjct: 432 GFCKENKVEKGLKLYKELKALG 453
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P + L+ F G+ ++L M P Y II LC + K A
Sbjct: 243 GLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEA 302
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ IF ++ ++G PD + +I GFC+ + A +L+ EM +G P+E YN++I G
Sbjct: 303 YCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHG 362
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
++S+ + +M+ G+
Sbjct: 363 HFKRGEISLVEAFYNEMLRNGY 384
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
L+ A G +LL Q K G+ P + Y +I C+ G + M+
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVAS 132
P + +I G C + + EA +++ ++ +G PD V Y +IRG + L A
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 133 RVWGQMMEKGFTLDRANSEILISAN 157
++W +M++KG + ++I +
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGH 363
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI VVT ++ L+ D +L +M + +RI +I LC G +
Sbjct: 175 GISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI--RCLIRALCDGGDVSEG 232
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + ++QG+ P LI+GFC+ + ++ M + +P Y II+G
Sbjct: 233 YELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKG 292
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDR 147
L + KK A ++ + +KG+ DR
Sbjct: 293 LCMNKKQLEAYCIFKNLKDKGYAPDR 318
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 1 NGILPDVVTFTILVEAFLRE----GSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSG 56
N + P++ TF IL++ F ++ GS + K++LDQ + P+ I Y ++I LC G
Sbjct: 290 NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ----DVKPNVISYNSLINGLCNGG 345
Query: 57 KIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLY---------------- 100
KI A ++ MV G+ P++I+ NALINGFCK+ + EA+ ++
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 101 -------------------EEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEK 141
EEM+ G PD TYN +I GL + A +++ Q+ K
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 142 GFTLDRANSEILISANSRDAAS 163
G D IL+ R S
Sbjct: 466 GLP-DLVTFHILMEGYCRKGES 486
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +P + +L++A+ + G D L ++M + GI PD Y +I LC++G I A
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F + +G+P D+++ + L+ G+C+ +A L +EM G P +TYN++++G
Sbjct: 456 KKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Query: 122 LIVEKKLSVASRVWGQM-MEKGFTLDRANSEILISANSR 159
E L A+ + QM E+ ++ A+ +L+ S+
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 84/153 (54%), Gaps = 2/153 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI+PDV T+ L+ R G+ + AKKL DQ+T G+ PD + + ++ C+ G+ A
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKA 489
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS-RGPYPDEVTYNLIIR 120
+ +M + G+ P ++ N ++ G+CK + A + +M+ R + +YN++++
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEIL 153
G + KL A+ + +M+EKG +R EI+
Sbjct: 550 GYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCK---SGKIG 59
I P+V TF +++ A + G + A+ +++ M G SP+ + Y T+I CK +GK+
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A + +MVE + P++ + N LI+GF K + +M++++EM + P+ ++YN +I
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 120 RGLIVEKKLSVASRVWGQMMEKG 142
GL K+S A + +M+ G
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAG 361
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 77/145 (53%), Gaps = 7/145 (4%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKM---GISPDRIFYTTIIGHLCKSGKI 58
G+ P+++T+ L+ F + +D+ K+ LD + G P Y +I CK GKI
Sbjct: 361 GVQPNLITYNALINGFCK---NDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
+ +M +GI PDV + N LI G C++ + A +L++++ S+G PD VT++++
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHIL 476
Query: 119 IRGLIVEKKLSVASRVWGQMMEKGF 143
+ G + + A+ + +M + G
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGL 501
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
L+ A L+E S + + +M + I P+ + +I LCK+GK+ A + DM G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 73 IPPDVISCNALINGFCK---SFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
P+V+S N LI+G+CK + ++ +A + +EM P+ T+N++I G + L
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 130 VASRVWGQMMEK 141
+ +V+ +M+++
Sbjct: 314 GSMKVFKEMLDQ 325
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 82/155 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P+V + L+ F G D A L +M GIS D YTT+I L K G I LA
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ ++++ GI PD I L+NG K + +A ++ EEM+ + P+ + Y+ +I G
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
E L+ A R+ +M+EKG D +L+S
Sbjct: 810 HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 88/159 (55%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P+VVTFT L+ F + D+A ++ +M M + D Y +I CK +
Sbjct: 619 NGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKT 678
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+T+F ++ E G+ P+V N+LI+GF ++ A+ LY++M + G D TY +I
Sbjct: 679 AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
GL+ + +++AS ++ ++++ G D +L++ S+
Sbjct: 739 GLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI D+ T+T +++ L++G+ ++A L ++ +GI PD I + ++ L K G+
Sbjct: 724 DGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLK 783
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +M ++ + P+V+ + +I G + ++EA +L++EM +G D+ +NL++
Sbjct: 784 ASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Query: 121 GLIVEKKLSVASRV 134
G + +K AS++
Sbjct: 844 GRV--EKPPAASKI 855
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 72/132 (54%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
T+T ++ AF++EG+ + A +++D+M GI I T+++ CK ++G A +F M
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
E+G+ PD + + ++ FCK+ + +A++ Y M+S P V + +I+G + +
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESP 431
Query: 129 SVASRVWGQMME 140
A ++ E
Sbjct: 432 EAALEIFNDSFE 443
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 74/138 (53%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
++ +++ F++ G +D A + +M++ G SP+ + +T++I CKS ++ LA + +M
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
+ D+ + ALI+GFCK + A L+ E+ G P+ YN +I G K+
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 129 SVASRVWGQMMEKGFTLD 146
A ++ +M+ G + D
Sbjct: 712 DAAIDLYKKMVNDGISCD 729
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 17 FLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPD 76
F ++G D A L M + GI P+ +FY ++ C+ + LA +IF +M+E+G+ P+
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 77 VISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWG 136
+ + LI+GF K+ A + +M + +EV YN II GL + S A +
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 137 QMM-EKGFTL 145
++ EK +++
Sbjct: 579 NLIKEKRYSM 588
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMT-KMGISPDRIFYTTIIGHLCKSGKIGL 60
G PD + F++ V+A + +A LL +M K+G+ + YT++I K G +
Sbjct: 269 GAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEE 328
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +MV GIP VI+ +L+NG+CK + +A+ L+ M+ G PD+V +++++
Sbjct: 329 AVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVE 388
Query: 121 GLIVEKKLSVASRVWGQM 138
++ A + +M
Sbjct: 389 WFCKNMEMEKAIEFYMRM 406
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD V F+++VE F + + A + +M + I+P + T+I K+ A
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAA 434
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF D E I + CN + FCK +V A + M+ +G P+ V YN ++
Sbjct: 435 LEIFNDSFESWIAHGFM-CNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLA 493
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K + +A ++ +M+EKG + ILI
Sbjct: 494 HCRMKNMDLARSIFSEMLEKGLEPNNFTYSILI 526
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
F L+ A++R D A M + P + ++ L +S I A I+ MV
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
G+ D ++ L+ + + EA++++ + SRG PD + ++L ++
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
>AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:493683-495158 FORWARD
Length = 491
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 79/138 (57%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PDVVT+ L++ + ++ + A KL+D+M + +PD I YTT+IG L G+ A
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 300
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M E G PDV + NA I FC + R+ +A +L +EM +G P+ TYNL R
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 122 LIVEKKLSVASRVWGQMM 139
L + L + ++ +M+
Sbjct: 361 LSLANDLGRSWELYVRML 378
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+ TF IL+ + SS+ A+ ++M G+ PD + Y ++I CK +I A+ +
Sbjct: 212 PDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKL 268
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M E+ PDVI+ +I G + +A ++ +EM+ G YPD YN IR +
Sbjct: 269 IDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCI 328
Query: 125 EKKLSVASRVWGQMMEKGFT 144
++L A ++ +M++KG +
Sbjct: 329 ARRLGDADKLVDEMVKKGLS 348
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDV + + F A KL+D+M K G+SP+ Y L + +G +
Sbjct: 311 GCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRS 370
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG 107
++ M+ P+ SC LI F + +V AM+L+E+M +G
Sbjct: 371 WELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
>AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23967 Blast hits to 5877 proteins in 185 species: Archae
- 3; Bacteria - 26; Metazoa - 708; Fungi - 595; Plants -
21695; Viruses - 0; Other Eukaryotes - 940 (source: NCBI
BLink). | chr1:4669784-4672826 REVERSE
Length = 806
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 82/142 (57%), Gaps = 1/142 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD VT+ IL + F G A +++ M G+SPD I YT ++ C+ G I +
Sbjct: 286 HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 345
Query: 61 AHTIFCDMVEQGIPPD-VISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+ DM+ +G + +I C+ +++G CK+ R+ EA+ L+ +M++ G PD V Y+++I
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 120 RGLIVEKKLSVASRVWGQMMEK 141
GL K +A ++ +M +K
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDK 427
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
T++ +V+ R+ + A L I P + + +I+ CK G + +A + FC +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
++ G+ P V S N LING C ++EA++L +M G PD VTYN++ +G + +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 129 SVASRVWGQMMEKGFTLDRANSEILISANSR 159
S A V M++KG + D IL+ +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIF-YTTIIGHLCKSGKIGL 60
G+ PDV+T+TIL+ + G+ D+ LL M G + I + ++ LCK+G+I
Sbjct: 322 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 381
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++F M G+ PD+++ + +I+G CK + A+ LY+EM + P+ T+ ++
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
GL + L A + ++ G TLD I+I ++
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG-- 59
G+ P VV++T L++A+ G++ +L +M GI P + Y+ I LC+ K
Sbjct: 533 GLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 592
Query: 60 ---LAHTIF--C-----DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY 109
L IF C DM +GIPPD I+ N +I C+ +S A E M+SR
Sbjct: 593 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Query: 110 PDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISAN 157
TYN++I L V + A + E+ +L + LI A+
Sbjct: 653 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
L ++ ++++ + G D A L +QM G+SPD + Y+ +I LCK GK +A
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
++ +M ++ I P+ + AL+ G C+ + EA L + + S G D V YN++I G
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ A ++ ++E G T A LI
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLI 510
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P VV+F ++ + + G D+AK + K G+ P + +I LC G I A +
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
DM + G+ PD ++ N L GF +S A ++ +M +G PD +TY +++ G
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 125 EKKLSVASRVWGQMMEKGFTLD 146
+ + + M+ +GF L+
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELN 361
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P V TF L+ + + + A+K+LD + G++P + YTT++ G
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEE------------MQSRGPY 109
+ +M +GIPP ++ + + G C+ ++ + E M+S G
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 110 PDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
PD++TYN II+ L K LS A M + A ILI +
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 72/134 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD+V ++I++ + G D+A L D+M I P+ + ++ LC+ G +
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLE 451
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ ++ G D++ N +I+G+ KS + EA++L++ + G P T+N +I
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 121 GLIVEKKLSVASRV 134
G + ++ A ++
Sbjct: 512 GYCKTQNIAEARKI 525
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
ILP+ T L+ ++G A+ LLD + G + D + Y +I KSG I A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+F ++E GI P V + N+LI G+CK+ ++EA ++ + ++ G P V+Y ++
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 2 GILPDVVTFTILVEAF------------LREGSSDIAKKLLDQMTKMGISPDRIFYTTII 49
GI P VT++++ + LRE + K+ L M GI PD+I Y TII
Sbjct: 568 GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII 627
Query: 50 GHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY 109
+LC+ + A M + + + N LI+ C + +A +Q +
Sbjct: 628 QYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVS 687
Query: 110 PDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
+ Y +I+ V+ +A +++ Q++ +GF +
Sbjct: 688 LSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 79/146 (54%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG +PD T+ L++ EG ++ A L ++ GI P+ I Y T+I L G I
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +M E+G+ P+V + N L+NG CK VS+A L + M S+G +PD T+N++I
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
G + K+ A + M++ G D
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPD 495
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDV+T+ L+ + A+ L +M G+ PD Y T+I CK G + LA
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I D V G PD + +LI+G C + A+ L+ E +G P+ + YN +I+G
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + + A+++ +M EKG + IL++
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+ TF IL+ + + + A ++LD M G+ PD Y +++ LCK+ K
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE+G P++ + N L+ C+ ++ EA+ L EEM+++ PD VT+ +I G
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 122 LIVEKKLSVASRVWGQMME 140
L A ++ +M E
Sbjct: 576 FCKNGDLDGAYTLFRKMEE 594
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
TF L+ ++G +KLLD++ K G+ P+ Y I LC+ G++ A + +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
+EQG PDVI+ N LI G CK+ + EA +M + G PD TYN +I G +
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 129 SVASRVWGQMMEKGFTLDRANSEILISA 156
+A R+ G + GF D+ LI
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD T+ L+ + + G +A++++ G PD+ Y ++I LC G+ A
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F + + +GI P+VI N LI G + EA QL EM +G P+ T+N+++ G
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANS 158
L +S A + M+ KG+ D ILI S
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+LP++ T+ + ++ + G D A +++ + + G PD I Y +I LCK+ K A
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
MV +G+ PD + N LI G+CK V A ++ + G PD+ TY +I G
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L E + + A ++ + + KG
Sbjct: 366 LCHEGETNRALALFNEALGKG 386
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P+V TF ILV + G A L+ M G PD + +I K+ A
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA 480
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I M++ G+ PDV + N+L+NG CK+ + + M+ Y+ M +G P+ T+N+++
Sbjct: 481 LEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLES 540
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L +KL A + +M K D LI ++
Sbjct: 541 LCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDV +FTI +++F + A +LL+ M+ G + + Y T++G +
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +F M+ G+ + + N L+ CK V E +L +++ RG P+ TYNL I+G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L +L A R+ G ++E+G
Sbjct: 261 LCQRGELDGAVRMVGCLIEQG 281
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+V+ + L++ +G A +L ++M++ G+ P+ + ++ LCK G + A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M+ +G PD+ + N LI+G+ ++ A+++ + M G PD TYN ++ G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L K + M+EKG + IL+ + R
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 36/185 (19%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P++ TF IL+E+ R D A LL++M ++PD + + T+I CK+G + A
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 62 HTIF------------------------------------CDMVEQGIPPDVISCNALIN 85
+T+F +MV++ + PD + +++
Sbjct: 586 YTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVD 645
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
GFCK+ V+ + EM G P T +I L VE ++ A+ + +M++KG
Sbjct: 646 GFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Query: 146 DRANS 150
+ N+
Sbjct: 706 EAVNT 710
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 36/179 (20%)
Query: 1 NGILPDV-----------------------------------VTFTILVEAFLREGSSDI 25
NG+ PDV TF IL+E+ R D
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQ-GIPPDVISCNALI 84
A LL++M ++PD + + T+I CK+G + A+T+F M E + + N +I
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Query: 85 NGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
+ F + V+ A +L++EM R PD TY L++ G +++ + +MME GF
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 19 REGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVI 78
R+G A + ++M P Y I+ L SG AH ++ M ++GI PDV
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 79 SCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQM 138
S + FCK+ R A++L M S+G + V Y ++ G E + ++G+M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 139 MEKGFTL 145
+ G +L
Sbjct: 208 LASGVSL 214
>AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL
FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040
FORWARD
Length = 778
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD VT+T +V AF+ G D A+++L +M +MG+ +RI Y ++ CK +I A +
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 65 FCDMVEQ-GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+M E GI PDV+S N +I+G + A+ + EM++RG P +++Y +++
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 124 VEKKLSVASRVWGQMM 139
+ + +A+RV+ +MM
Sbjct: 570 MSGQPKLANRVFDEMM 585
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKM---GISPDRIFYTTIIGHLCKSGKIGLA 61
PD +T L++ +++ G ++L+ M + PD + YTT++ +G + A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM-QSRGPYPDEVTYNLIIR 120
+ +M G+P + I+ N L+ G+CK ++ A L EM + G PD V+YN+II
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
G I+ + A + +M +G + + L+ A
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKA 567
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDVV++ I+++ + S A ++M GI+P +I YTT++ SG+ LA
Sbjct: 518 GIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLA 577
Query: 62 HTIFCDMV-EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ +F +M+ + + D+I+ N L+ G+C+ + +A ++ M+ G YP+ TY +
Sbjct: 578 NRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLAN 637
Query: 121 GLIVEKKLSVASRVWGQMMEK 141
G+ +K A +W ++ E+
Sbjct: 638 GVSQARKPGDALLLWKEIKER 658
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 80/158 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P+ +++ L++A+ + DIA KLL QM + G PD + Y +I L SG + A
Sbjct: 375 GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ ++++G+ PD N L++G CK+ R A L+ EM R PD Y +I G
Sbjct: 435 VNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDG 494
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
I A +V+ +EKG +D + +I R
Sbjct: 495 FIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 77/146 (52%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N PDV T+ IL+ +EG ++A LD+ +K G+ P+ + Y +I CKS + +
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M E+G PD+++ LI+G S + +A+ + ++ RG PD YN+++
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
GL + A ++ +M+++ D
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPD 484
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD + +L+ + G AK L +M I PD Y T+I +SG A
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F VE+G+ DV+ NA+I GFC+S + EA+ M PD+ TY+ II G
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ ++ ++ A +++ + MEK
Sbjct: 565 YVKQQDMATAIKIF-RYMEKN 584
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ DVV +++ F R G D A +++M + + PD+ Y+TII K + A
Sbjct: 515 GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATA 574
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF M + P+V++ +LINGFC A + ++EMQ R P+ VTY +IR
Sbjct: 575 IKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 122 LIVEKK-LSVASRVWGQMM 139
L E L A W MM
Sbjct: 635 LAKESSTLEKAVYYWELMM 653
Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 79/162 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
ILPD + L++ F+R G D A+K+ + G+ D + + +I C+SG + A
Sbjct: 480 NILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
M E+ + PD + + +I+G+ K ++ A++++ M+ P+ VTY +I G
Sbjct: 540 LACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLING 599
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
+ +A + +M + + LI + ++++++
Sbjct: 600 FCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESST 641
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGI----------------------- 38
G +P + TF ++ F +EG + +LL ++ + G+
Sbjct: 270 GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 39 ------------SPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALING 86
PD Y +I LCK GK +A + ++G+ P+ +S LI
Sbjct: 330 AESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 87 FCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
+CKS A +L +M RG PD VTY ++I GL+V + A + +++++G + D
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 147 RANSEILISA 156
A +L+S
Sbjct: 450 AAIYNMLMSG 459
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 35/186 (18%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D + ILV+ EG ++ +KL++ G P+ +FY TIIG CK G I A+ +F
Sbjct: 204 DNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVF 263
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG--------------PY-- 109
++ +G P + + +INGFCK + +L E++ RG Y
Sbjct: 264 KELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRH 323
Query: 110 -------------------PDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANS 150
PD TYN++I L E K VA + +KG + +
Sbjct: 324 GYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSY 383
Query: 151 EILISA 156
LI A
Sbjct: 384 APLIQA 389
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
+PDV+ L+ ++ A+K+ D+M G S D ++ +C GK+ +
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ +G P+++ N +I G+CK + A +++E++ +G P T+ +I G
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 124 VEKKLSVASRVWGQMMEKGF 143
E + R+ ++ E+G
Sbjct: 287 KEGDFVASDRLLSEVKERGL 306
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 35/188 (18%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +P++V + ++ + + G + A + ++ G P + T+I CK G +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 62 HTIFCDMVEQGI-----------------------------------PPDVISCNALING 86
+ ++ E+G+ PDV + N LIN
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 87 FCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
CK + A+ +E +G P+ ++Y +I+ K+ +AS++ QM E+G D
Sbjct: 355 LCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD 414
Query: 147 RANSEILI 154
ILI
Sbjct: 415 IVTYGILI 422
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 15/161 (9%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCK-SGKIG 59
N P+VVT+T L+ F +G +A++ +M + P+ + YTT+I L K S +
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSF--------------RVSEAMQLYEEMQS 105
A + M+ P+ ++ N L+ GF K + S + + M+S
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKS 703
Query: 106 RGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
G YN + L V + A +M++KGF+ D
Sbjct: 704 DGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPD 744
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGIS-PDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQ 71
++ A+ GS A ++ D + ++ S PD I +++ L KS ++G A ++ +M ++
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 72 GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVA 131
G D S L+ G C +V +L E +G P+ V YN II G + A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 132 SRVWGQMMEKGF 143
V+ ++ KGF
Sbjct: 260 YLVFKELKLKGF 271
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFC 66
+VT+ IL++AF + G D A L +M MG+ D + YT++I C G++ +F
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 67 DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEK 126
+++E+G P I+ N LI GFCK ++ EA +++E M RG P+ TY +I GL
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 127 KLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
K A ++ M+EK + I+I+ +D
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D+V +T L+ F G D K L D++ + G SP I Y T+I CK G++ A
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF M+E+G+ P+V + LI+G C + EA+QL M + P+ VTYN+II
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 122 L 122
L
Sbjct: 362 L 362
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 74/136 (54%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P +T+ L+ F + G A ++ + M + G+ P+ YT +I LC GK A +
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M+E+ P+ ++ N +IN CK V++A+++ E M+ R PD +TYN+++ GL
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 125 EKKLSVASRVWGQMME 140
+ L AS++ M++
Sbjct: 400 KGDLDEASKLLYLMLK 415
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+V T+T L++ G + A +LL+ M + P+ + Y II LCK G + A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY--PDEVTYNLII 119
I M ++ PD I+ N L+ G C + EA +L M Y PD ++YN +I
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
GL E +L A ++ ++EK DR + IL+++
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N ++PDV ++ ++ F + A +L ++M G S + + +I CK+GK+
Sbjct: 171 NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +M G+ D++ +LI GFC + L++E+ RG P +TYN +IR
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
G +L AS ++ M+E+G
Sbjct: 291 GFCKLGQLKEASEIFEFMIERG 312
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D VT IL+ + L+ G + A +L Q++ I + YT +I CK+G + +A +
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
C M + P V N L++ CK + +A +L+EEMQ +PD V++N++I G +
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 126 KKLSVASRVWGQMMEKGFTLD 146
+ A + M G + D
Sbjct: 578 GDIKSAESLLVGMSRAGLSPD 598
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
T+T +++ F + G ++AK LL +M + P Y ++ LCK G + A +F +M
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
PDV+S N +I+G K+ + A L M G PD TY+ +I + L
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 129 SVASRVWGQMMEKGFTLD 146
A + +M++ GF D
Sbjct: 616 DEAISFFDKMVDSGFEPD 633
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 72/143 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P V + L+ + +EGS D A +L ++M + PD + + +I K+G I A ++
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M G+ PD+ + + LIN F K + EA+ +++M G PD + +++ I
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646
Query: 125 EKKLSVASRVWGQMMEKGFTLDR 147
+ + + + ++++K LD+
Sbjct: 647 QGETDKLTELVKKLVDKDIVLDK 669
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +V IL++ R A LL +M + + PD Y T+I C+ ++ A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M G +++ LI+ FCK+ ++ EAM +EM+ G D V Y +IRG
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+L ++ +++E+G
Sbjct: 257 FCDCGELDRGKALFDEVLERG 277
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+ V+ + L+E +++ + A +L M K G + + + ++ LC++ + G A ++
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+M + PDV S N +I GFC+ + +A++L EM+ G VT+ ++I
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 126 KKLSVASRVWGQMMEKGFTLD 146
K+ A +M G D
Sbjct: 226 GKMDEAMGFLKEMKFMGLEAD 246
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%)
Query: 57 KIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYN 116
K G A + M+++G +V + N L+ G C++ +A+ L EM+ PD +YN
Sbjct: 122 KTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYN 181
Query: 117 LIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+IRG K+L A + +M G + ILI A
Sbjct: 182 TVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDA 221
>AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11425270-11427669 REVERSE
Length = 799
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 78/140 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
I D V + + +A + G + A +LL +M GI PD I YTT+I C GK+ A
Sbjct: 383 NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDA 442
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M+ G+ PD+I+ N L++G ++ E +++YE M++ GP P+ VT ++II G
Sbjct: 443 LDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEG 502
Query: 122 LIVEKKLSVASRVWGQMMEK 141
L +K+ A + + +K
Sbjct: 503 LCFARKVKEAEDFFSSLEQK 522
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
F++ +E +L E + D+ KK M+ + P R +IG CK + A +F MV
Sbjct: 564 FSLCIEGYL-EKAHDVLKK----MSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV 618
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
E+G+ PD+ + +I+ +C+ + +A L+E+M+ RG PD VTY +++
Sbjct: 619 ERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ + V +++++ + + A + + M I DR+ Y L K G++ A
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEA 407
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M ++GI PDVI+ LI+G+C +V +A+ L +EM G PD +TYN+++ G
Sbjct: 408 FELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSG 467
Query: 122 L 122
L
Sbjct: 468 L 468
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI+PDV+ +T L++ + +G A L+D+M G+SPD I Y ++ L ++G
Sbjct: 418 GIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEV 477
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGP 108
I+ M +G P+ ++ + +I G C + +V EA + ++ + P
Sbjct: 478 LEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCP 524
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCK------- 54
G++PD+ T+TI++ + R A+ L + M + GI PD + YT ++ K
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHE 680
Query: 55 ----SGKIG--LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGP 108
G++G A + + GI DV+ LI+ CK + +A +L++ M G
Sbjct: 681 TCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGL 740
Query: 109 YPDEVTYNLII 119
PD V Y +I
Sbjct: 741 EPDMVAYTTLI 751
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 2 GILPDVVTFTILVEAFLR-------------EGSSDIAKKLLDQMTKMGISPDRIFYTTI 48
GI PDVVT+T+L++ +L+ E A ++L + + GI D + YT +
Sbjct: 656 GIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVL 715
Query: 49 IGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGP 108
I CK + A +F M++ G+ PD+++ LI+ + + + A+ L E+ +
Sbjct: 716 IDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYN 775
Query: 109 YPDE 112
P E
Sbjct: 776 IPSE 779
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
++ AF + + A+ L D M + G+ PD YT +I C+ ++ A ++F DM ++G
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 73 IPPDVISCNALINGFCK-------------SFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
I PDV++ L++ + K +A ++ E + G D V Y ++I
Sbjct: 657 IKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLI 716
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L A+ ++ +M++ G D LIS+ R
Sbjct: 717 DRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFR 756
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 25 IAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALI 84
++KK ++ + Y + LC G + AH + M + P C +I
Sbjct: 539 LSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMI 598
Query: 85 NGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFT 144
FCK V EA L++ M RG PD TY ++I +L A ++ M ++G
Sbjct: 599 GAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIK 658
Query: 145 LDRANSEILI 154
D +L+
Sbjct: 659 PDVVTYTVLL 668
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DV +++ + + + A LD+M G+ + + + I+ CK A F
Sbjct: 317 DVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKF 376
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+ + I D + N + K RV EA +L +EM+ RG PD + Y +I G ++
Sbjct: 377 KEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQ 436
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
K+ A + +M+ G + D +L+S +R+
Sbjct: 437 GKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNG 472
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ PD++T+ +LV R G + ++ ++M G P+ + + II LC + K+
Sbjct: 452 NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKE 511
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS--RGPYPDEVTYNLI 118
A F + EQ P + S + G+C++ +A + + ++ R ++ ++L
Sbjct: 512 AEDFFSSL-EQKCPENKAS---FVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLC 567
Query: 119 IRGLIVEKKLSVASRVWGQMMEKGFTL 145
I G + EK V ++ +E G ++
Sbjct: 568 IEGYL-EKAHDVLKKMSAYRVEPGRSM 593
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 84/138 (60%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+LP++ T++ +++ + + G+ A L ++ + P+ + + T++ CK+ ++
Sbjct: 263 HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVT 322
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++F MV+ G+ P++ N LI+G CKS + EA+ L EM+S PD TY ++I
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 121 GLIVEKKLSVASRVWGQM 138
GL +E +++ A+R++ +M
Sbjct: 383 GLCIEDQVAEANRLFQKM 400
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 80/141 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++PDV + +L + ++G +KLLD+MT +GI P+ YT I LC+ K+ A
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M + G+ P++ + +A+I+G+CK+ V +A LY+E+ P+ V + ++ G
Sbjct: 254 EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG 313
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
++L A ++ M++ G
Sbjct: 314 FCKARELVTARSLFVHMVKFG 334
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+LP+VV F LV+ F + A+ L M K G+ P+ Y +I CKSG + A
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAV 359
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M + PDV + LING C +V+EA +L+++M++ +P TYN +I G
Sbjct: 360 GLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGY 419
Query: 123 IVEKKLSVASRVWGQMMEKG 142
E + A + +M G
Sbjct: 420 CKEYNMEQALDLCSEMTASG 439
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P++ + L+ + G+ A LL +M + +SPD YT +I LC ++ A
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +F M + I P + N+LI+G+CK + + +A+ L EM + G P+ +T++ +I G
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ + A ++ +M KG D LI A+ ++A
Sbjct: 454 YCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEA 493
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 68/138 (49%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV T+TIL+ E A +L +M I P Y ++I CK + A +
Sbjct: 372 PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+M G+ P++I+ + LI+G+C + AM LY EM +G PD VTY +I
Sbjct: 432 CSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Query: 125 EKKLSVASRVWGQMMEKG 142
E + A R++ M+E G
Sbjct: 492 EANMKEALRLYSDMLEAG 509
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 71/129 (55%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P T+ L+ + +E + + A L +MT G+ P+ I ++T+I C I A
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
++ +M +GI PDV++ ALI+ K + EA++LY +M G +P++ T+ ++ G
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Query: 123 IVEKKLSVA 131
E +LSVA
Sbjct: 525 WKEGRLSVA 533
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ P+++TF+ L++ + A L +MT GI PD + YT +I K +
Sbjct: 438 SGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKE 497
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ DM+E GI P+ + L++GF K R+S A+ Y+E + + V + +I
Sbjct: 498 ALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIE 557
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
GL + ASR + M G T D
Sbjct: 558 GLCQNGYILRASRFFSDMRSCGITPD 583
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 75/141 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI+PDVVT+T L++A +E + A +L M + GI P+ + ++ K G++ +A
Sbjct: 474 GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA 533
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + +Q + + LI G C++ + A + + +M+S G PD +Y +++G
Sbjct: 534 IDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ EK+++ + M++ G
Sbjct: 594 HLQEKRITDTMMLQCDMIKTG 614
>AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: EMB2745 (EMBRYO
DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 13180 Blast hits
to 4377 proteins in 153 species: Archae - 4; Bacteria -
12; Metazoa - 210; Fungi - 191; Plants - 12251; Viruses
- 0; Other Eukaryotes - 512 (source: NCBI BLink). |
chr1:29087145-29088521 FORWARD
Length = 458
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGIS--PDRIFYTTIIGHLCKSG------ 56
PDV + ++ A R G+ A+ LLDQM G PD YT +I C+ G
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 57 -----KIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPD 111
++ A+ +F +M+ +G PDV++ N LI+G CK+ R+ A++L+E+M+++G P+
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 112 EVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
+VTYN IR V ++ A + M + G
Sbjct: 318 QVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +PDVVT+ L++ + A +L + M G P+++ Y + I + + +I A
Sbjct: 278 GFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGA 337
Query: 62 HTIFCDMVEQGIP-PDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ M + G P + LI+ ++ R +EA L EM G P E TY L+
Sbjct: 338 IEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCD 397
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
L E S + M +G
Sbjct: 398 ALSSEGLASTLDEELHKRMREG 419
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G + D VT+ L+ F RE + A ++ D+M K+ I+P + ++IG LC GK LA
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F ++ E G+ PD + N++I G+CK RV +A + Y E PD T N+++ G
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRD 160
L E A + ++E+ +D +ISA +D
Sbjct: 601 LCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKD 638
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P V TF L+ G +++A + D++ + G+ PD + +II CK G++ A
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ + ++ PD +CN L+NG CK +A+ + + D VTYN +I
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAF 635
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
+KKL A + +M EKG DR IS
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD VT+ +++A ++G K+LL M K G+ P+R+ Y ++ CK G + A I
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M + + PD+ + N LING C + + E ++L + M+S PD VTYN +I G
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCF- 356
Query: 125 EKKLSVASRVWGQMME 140
E LS+ +R + ME
Sbjct: 357 ELGLSLEARKLMEQME 372
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQM-TKMGISPDRIFYTTIIGHLCKSGKIGL 60
G+ +V TF +LV + EG + A +L++M ++ ++PD + Y TI+ + K G++
Sbjct: 199 GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSD 258
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ DM + G+ P+ ++ N L+ G+CK + EA Q+ E M+ PD TYN++I
Sbjct: 259 LKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILIN 318
Query: 121 GL 122
GL
Sbjct: 319 GL 320
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PD+VT+ L++A+L+ G A +++ +M + GI + I TI+ LCK K+
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDE 469
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
AH + ++G D ++ LI GF + +V +A+++++EM+ P T+N +I
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRA--NSEIL 153
GL K +A + ++ E G D + NS IL
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+LPD TF ++ + +EG + A + ++ K PD ++ LCK G
Sbjct: 550 SGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK 609
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F ++E+ D ++ N +I+ FCK ++ EA L EM+ +G PD TYN I
Sbjct: 610 ALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDR 147
L+ + KLS + + K ++ R
Sbjct: 669 LLMEDGKLSETDELLKKFSGKFGSMKR 695
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG++P+ VT+ LV + + GS A ++++ M + + PD Y +I LC +G +
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVS-EAMQLYEEMQSRGPYPDEVTYNLII 119
+ M + PDV++ N LI+G C +S EA +L E+M++ G ++VT+N+ +
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISL 387
Query: 120 RGLIVEKKLSVASRVWGQMME-KGFTLDRANSEILISA 156
+ L E+K +R ++++ GF+ D LI A
Sbjct: 388 KWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVVT+ L++ G S A+KL++QM G+ +++ + + LCK K
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK 402
Query: 65 FCDMVE-QGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
++V+ G PD+++ + LI + K +S A+++ EM +G + +T N I+ L
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
E+KL A + ++GF +D LI
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCK---SGKIGLA 61
P F I + A+L EG +A ++ +M ++ + P+ + T++ L + S I A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY-PDEVTYNLIIR 120
+F DMV+ G+ +V + N L+NG+C ++ +A+ + E M S PD VTYN I++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ + +LS + M + G +R L+
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLV 282
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 13 LVEAFLR--EGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVE 70
L+ +++R + S + LL + P + + + GK +A IF M+
Sbjct: 100 LLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIR 159
Query: 71 QGIPPDVISCNALINGFCK---SFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
+ P++++CN L+ G + SF +S A +++++M G + T+N+++ G +E K
Sbjct: 160 LKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK 219
Query: 128 LSVA 131
L A
Sbjct: 220 LEDA 223
>AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript
processing defect 43) | chr1:28133933-28135381 FORWARD
Length = 453
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P++ T+ +++ F R G A + +M K D + YTT++ +G+I A
Sbjct: 225 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRA 284
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M+ +G+ P V + NA+I CK V A+ ++EEM RG P+ TYN++IRG
Sbjct: 285 RNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRG 344
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L + S + +M +G
Sbjct: 345 LFHAGEFSRGEELMQRMENEG 365
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DVVT+T +V F G A+ + D+M + G+ P Y +I LCK + A +F
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 323
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+MV +G P+V + N LI G + S +L + M++ G P+ TYN++IR
Sbjct: 324 EEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR 378
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P TF I+ E + G D A KL M + G D + TI+ LCKS ++ A+
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F + D ++ N ++NG+C R +A+++ +EM RG P+ TYN +++G
Sbjct: 182 ELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGF 240
Query: 123 IVEKKLSVASRVWGQMMEKGFTLD 146
++ A + +M ++ +D
Sbjct: 241 FRAGQIRHAWEFFLEMKKRDCEID 264
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 65/126 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+LP V T+ +++ ++ + + A + ++M + G P+ Y +I L +G+
Sbjct: 295 GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG 354
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M +G P+ + N +I + + V +A+ L+E+M S P+ TYN++I G
Sbjct: 355 EELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Query: 122 LIVEKK 127
+ V K+
Sbjct: 415 MFVRKR 420
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D +F + ++ R L+ +M + I P + + +GK A +F
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+M E G D+ S N +++ CKS RV +A +L+ ++ R D VTYN+I+ G +
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLI 208
Query: 126 KKLSVASRVWGQMMEKG 142
K+ A V +M+E+G
Sbjct: 209 KRTPKALEVLKEMVERG 225
>AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29068343-29069828 REVERSE
Length = 441
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+V T+T+L++A G A L QM++ GI PD YT +I C + A +
Sbjct: 258 PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGL 317
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
M+E G+ P+VI+ NALI GFCK V +AM L +M + PD +TYN +I G
Sbjct: 318 LEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTLIAG 373
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD T+T + R D A K+ +MT+ G + + YT +I L ++ KI A
Sbjct: 185 GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEA 244
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ M + P+V + LI+ C S + SEAM L+++M G PD+ Y ++I+
Sbjct: 245 LSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQS 304
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
L AS + M+E G
Sbjct: 305 FCSGDTLDEASGLLEHMLENGL 326
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 71/163 (43%), Gaps = 1/163 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG + V++T L+ D A LL +M P+ YT +I LC SG+
Sbjct: 219 NGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSE 278
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F M E GI PD LI FC + EA L E M G P+ +TYN +I+
Sbjct: 279 AMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIK 338
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
G +K + A + +M+E+ D LI+ S
Sbjct: 339 GF-CKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGIS 380
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+ TF LV + + G AK+ + + + G PD YT+ I C+ ++ A +
Sbjct: 153 PDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKV 212
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M + G + +S LI G ++ ++ EA+ L +M+ P+ TY ++I L
Sbjct: 213 FKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG 272
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILI----SANSRDAAS 163
+ S A ++ QM E G D +LI S ++ D AS
Sbjct: 273 SGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEAS 315
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
+ L+ + R G + K+L +M + +SPD + T++ CK G + A ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
+ G PD + + I G C+ V A ++++EM G + +EV+Y +I GL KK+
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 130 VASRVWGQMMEKGFTLDRANSEILISA 156
A + +M + + +LI A
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDA 269
>AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19608857-19610428 REVERSE
Length = 523
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD +F I + A+ G A K+LD+M + + P+ + II LCK+ K+ A
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA 332
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + +M+++G PD + N+++ C V+ A +L M PD TYN++++
Sbjct: 333 YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKL 392
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
LI + A+ +W M E+ F A ++I
Sbjct: 393 LIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI+P T++ILV + R + A+K+ D+M + D + Y ++ LCKSG +
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +F +M G+ PD S I+ +C + V A ++ + M+ P+ T+N II+
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L +K+ A + +M++KG D
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPD 347
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
++P+V TF +++ + D A LLD+M + G +PD Y +I+ + C ++ A
Sbjct: 309 LVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRAT 368
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M PD + N ++ + R A +++E M R YP TY ++I GL
Sbjct: 369 KLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGL 428
Query: 123 IVEK-KLSVASRVWGQMMEKG 142
+ +K KL A R + M+++G
Sbjct: 429 VRKKGKLEEACRYFEMMIDEG 449
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D++ + L++A + G D K+ +M +G+ PD + I C +G + A+ +
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
M + P+V + N +I CK+ +V +A L +EM +G PD TYN I+
Sbjct: 302 DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F MVE GI P V + L++ C V+ A + + + + G P TY++++RG
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWAR 220
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ S A +V+ +M+E+ +D L+ A
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDA 252
>AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22768974-22771274 REVERSE
Length = 766
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+ VT+ L++ + R G + AK+++ +M + I P+ + TI+G +C+ + +A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F DM ++G+ +V++ LI+ C V +AM YE+M G PD Y +I GL
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILI 154
++ A RV ++ E GF+LD +LI
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD +T+ L+ F + + +++++QM + G+ P Y +I C G++ A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 62 HTIFCDM-VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+F DM + + P+ + N LIN F K +A+ L EEM+ + P+ TYN + +
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK 695
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L + + ++ +M+E+ ++ EIL+
Sbjct: 696 CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ +VVT+ L+ A + + A ++M + G SPD Y +I LC+ + A
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + E G D+++ N LI FC + ++ +M+ G PD +TYN +I
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
K R+ QM E G
Sbjct: 591 FGKHKDFESVERMMEQMREDGL 612
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 41/151 (27%)
Query: 29 LLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIP-------------- 74
L+ + + G+SP+ ++ T I LCK+ + A I D+++ P
Sbjct: 246 LISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLG 305
Query: 75 ---------------------PDVISCNALINGFCKSFRVSEAMQLYEEMQSRGP----- 108
PDV++ LIN CKS RV EA++++E+M+ +
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNV 365
Query: 109 -YPDEVTYNLIIRGLIVEKKLSVASRVWGQM 138
D + +N +I GL +L A + +M
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD + L+ + A ++++++ + G S D + Y +IG C
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKV 565
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + DM ++G PD I+ N LI+ F K ++ E+M+ G P TY +I
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 122 LIVEKKLSVASRVWGQM 138
+L A +++ M
Sbjct: 626 YCSVGELDEALKLFKDM 642
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQM-TKMGISPDRIFYTTIIGHLCKSGKIG 59
+G+ P V T+ +++A+ G D A KL M ++P+ + Y +I K G G
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A ++ +M + + P+V + NAL + + ++L +EM + P+++T +++
Sbjct: 670 QALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Query: 120 RGL 122
L
Sbjct: 730 ERL 732
>AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10374927-10377227 FORWARD
Length = 766
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
+P+ VT+ L++ + R G + AK+++ +M + I P+ + TI+G +C+ + +A
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
F DM ++G+ +V++ LI+ C V +AM YE+M G PD Y +I GL
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
++ A RV ++ E GF+LD +LI
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD +T+ L+ F + + +++++QM + G+ P Y +I C G++ A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 62 HTIFCDM-VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+F DM + + P+ + N LIN F K +A+ L EEM+ + P+ TYN + +
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK 695
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L + + ++ +M+E+ ++ EIL+
Sbjct: 696 CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ +VVT+ L+ A + + A ++M + G SPD Y +I LC+ + A
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + E G D+++ N LI FC + ++ +M+ G PD +TYN +I
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
K R+ QM E G
Sbjct: 591 FGKHKDFESVERMMEQMREDGL 612
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 44/179 (24%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N I D+V + E L E IA L+ + + G+SP+ ++ T I LCK+ +
Sbjct: 221 NRITADIVLHEVWKERLLTE-EKIIA--LISRFSSHGVSPNSVWLTRFISSLCKNARANT 277
Query: 61 AHTIFCDMVEQGIP-----------------------------------PDVISCNALIN 85
A I D+++ P PDV++ LIN
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 86 GFCKSFRVSEAMQLYEEMQSRGP------YPDEVTYNLIIRGLIVEKKLSVASRVWGQM 138
CKS RV EA++++E+M+ + D + +N +I GL +L A + +M
Sbjct: 338 TLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD + L+ + A ++++++ + G S D + Y +IG C
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + DM ++G PD I+ N LI+ F K ++ E+M+ G P TY +I
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 122 LIVEKKLSVASRVWGQM 138
+L A +++ M
Sbjct: 626 YCSVGELDEALKLFKDM 642
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQM-TKMGISPDRIFYTTIIGHLCKSGKIG 59
+G+ P V T+ +++A+ G D A KL M ++P+ + Y +I K G G
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A ++ +M + + P+V + NAL + + ++L +EM + P+++T +++
Sbjct: 670 QALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Query: 120 RGL 122
L
Sbjct: 730 ERL 732
>AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10332375-10334558 REVERSE
Length = 727
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
+P+ VT+ L++ + R G + AK+++ +M + I P+ + TI+G +C+ + +A
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
F DM ++G+ +V++ LI+ C V +AM YE+M G PD Y +I GL
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
++ A RV ++ E GF+LD +LI
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ +VVT+ L+ A + + A ++M + G SPD Y +I LC+ + A
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + E G D+++ N LI FC + ++ +M+ G PD +TYN +I
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
K R+ QM E G
Sbjct: 591 FGKHKDFESVERMMEQMREDGL 612
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD +T+ L+ F + + +++++QM + G+ P Y +I C G++ A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 62 HTIFCDM-VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+F DM + + P+ + N LIN F K +A+ L EEM+ + P+ TYN + +
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK 695
Query: 121 GL 122
L
Sbjct: 696 CL 697
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 44/179 (24%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N I D+V + E L E IA L+ + + G+SP+ ++ T I LCK+ +
Sbjct: 221 NRITADIVLHEVWKERLLTE-EKIIA--LISRFSSHGVSPNSVWLTRFISSLCKNARANT 277
Query: 61 AHTIFCDMVEQGIP-----------------------------------PDVISCNALIN 85
A I D+++ P PDV++ LIN
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 86 GFCKSFRVSEAMQLYEEMQSRGP------YPDEVTYNLIIRGLIVEKKLSVASRVWGQM 138
CKS RV EA++++E+M+ + D + +N +I GL +L A + +M
Sbjct: 338 TLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD + L+ + A ++++++ + G S D + Y +IG C
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + DM ++G PD I+ N LI+ F K ++ E+M+ G P TY +I
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 122 LIVEKKLSVASRVWGQM 138
+L A +++ M
Sbjct: 626 YCSVGELDEALKLFKDM 642
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P T+ I + A G D A++LL M +PD + Y T++ K GK A
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEA 393
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F D+ I P +++ N LI+G C+S + A +L EEM ++ +PD +TY +++G
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 453
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ LS+A+ V+ +M+ KG D
Sbjct: 454 FVKNGNLSMATEVYDEMLRKGIKPD 478
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 84/162 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++PD VT+T ++ +L G +A+ L D+M + + P I Y +I K+G++ A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+M ++G+ P+V++ NAL+ G CK+ + EA + +M+ G P++ +Y ++I
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
+K +++ +M++K D L +D S
Sbjct: 665 NCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES 706
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 84/153 (54%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+ + + ++ + G+ A + ++ ++G+ PD + YTT+I ++G+ +A +
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ +M+ + + P VI+ LI G K+ R+ +A Q EM+ RG P+ +T+N ++ G+
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISAN 157
+ A R +M E+G ++ + +LIS N
Sbjct: 633 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKN 665
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTT-IIGHLCKSGKIGLA 61
I PDV+T+T LV+ F++ G+ +A ++ D+M + GI PD YTT +G L + G A
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL-RLGDSDKA 498
Query: 62 HTIFCDMVE-QGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ +MV PD+ N I+G CK + +A++ ++ G PD VTY +IR
Sbjct: 499 FRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIR 558
Query: 121 GLIVEKKLSVASRVWGQMMEK 141
G + + +A ++ +M+ K
Sbjct: 559 GYLENGQFKMARNLYDEMLRK 579
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVV++ L+ +++ G A L D + I P + Y T+I LC+SG + A +
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY 115
+M Q I PDVI+ L+ GF K+ +S A ++Y+EM +G PD Y
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI+P V+TF ++++ + G + K+ +M + I + Y +I K+GK+
Sbjct: 232 HGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEE 291
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A DM G S N LI G+CK +A + +EM + G YP TYN+ I
Sbjct: 292 ARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYIC 351
Query: 121 GL 122
L
Sbjct: 352 AL 353
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 25 IAKKLL---DQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCN 81
+A+K L ++M + G P ++ L S + A ++ M+E GI P VI+ N
Sbjct: 183 MAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFN 242
Query: 82 ALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEK 141
+++ K+ + +++ EM+ R EVTYN++I G K+ A R G M
Sbjct: 243 TMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRS 302
Query: 142 GFTL 145
GF +
Sbjct: 303 GFAV 306
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G LP V I+++ + A + + M + GI P I + T++ K+G +
Sbjct: 198 GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV 257
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I+ +M + I ++ N LINGF K+ ++ EA + + +M+ G ++N +I G
Sbjct: 258 DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEG 317
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A V +M+ G + I I A
Sbjct: 318 YCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
Query: 2 GILPDVVTFTILVEAFLREG--SSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG 59
G +PD+++F L+ A L+ G + ++A +LLD + G+ PD I Y T++ + +
Sbjct: 255 GCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLD 314
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A +F DM PD+ + NA+I+ + + +EA +L+ E++ +G +PD VTYN ++
Sbjct: 315 GAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLL 374
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
E+ V+ QM + GF D +I
Sbjct: 375 YAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 409
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD +T+ L+ A R+ + D A K+ + M PD Y +I + G
Sbjct: 291 SGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAE 350
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F ++ +G PD ++ N+L+ F + + ++Y++MQ G DE+TYN II
Sbjct: 351 AERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIH 410
Query: 121 GLIVEKKLSVASRVWGQM 138
+ +L +A +++ M
Sbjct: 411 MYGKQGQLDLALQLYKDM 428
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 36/189 (19%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGI----------------------- 38
G PD VT+ L+ AF RE +++ K++ QM KMG
Sbjct: 362 GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Query: 39 -------------SPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
+PD I YT +I L K+ + A + +M++ GI P + + +ALI
Sbjct: 422 LQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALIC 481
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
G+ K+ + EA + M G PD + Y++++ L+ + A ++ M+ G T
Sbjct: 482 GYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTP 541
Query: 146 DRANSEILI 154
E++I
Sbjct: 542 SYTLYELMI 550
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PD +T+T+L+++ + + A L+ +M +GI P Y+ +I K+GK
Sbjct: 432 SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F M+ G PD ++ + +++ + +A LY +M S G P Y L+I
Sbjct: 492 AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 551
Query: 121 GLIVEKK 127
GL+ E +
Sbjct: 552 GLMKENR 558
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI-- 64
V + ++ + R G A++L+D M + G PD I + T+I KSG GL +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSG--GLTPNLAV 282
Query: 65 -FCDMVEQ-GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR-- 120
DMV G+ PD I+ N L++ + + A++++E+M++ PD TYN +I
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 121 ---GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRD 160
GL E A R++ ++ KGF D L+ A +R+
Sbjct: 343 GRCGLAAE-----AERLFMELELKGFFPDAVTYNSLLYAFARE 380
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+ T+ ++ + R G + A++L ++ G PD + Y +++ + +
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEV 389
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS-RGPYPDEVTYNLIIRGLI 123
+ M + G D ++ N +I+ + K ++ A+QLY++M+ G PD +TY ++I L
Sbjct: 390 YQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG 449
Query: 124 VEKKLSVASRVWGQMMEKG 142
+ A+ + +M++ G
Sbjct: 450 KANRTVEAAALMSEMLDVG 468
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 36/187 (19%)
Query: 12 ILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM--- 68
++++AF R G+ KK+ M G P Y +I LCK ++ A + +M
Sbjct: 862 LMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA 921
Query: 69 --------------------------------VEQGIPPDVISCNALINGFCKSFRVSEA 96
E G+ PD + N LI +C+ R E
Sbjct: 922 NFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEG 981
Query: 97 MQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L ++M++ G P TY +I +K L A +++ +++ KG LDR+ ++
Sbjct: 982 YLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Query: 157 NSRDAAS 163
SRD+ S
Sbjct: 1042 -SRDSGS 1047
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 41 DRI-FYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSE--AM 97
DR+ Y ++G +SGK A + M ++G PD+IS N LIN KS ++ A+
Sbjct: 223 DRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAV 282
Query: 98 QLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQM 138
+L + +++ G PD +TYN ++ + L A +V+ M
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM 323
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ DVV+++IL++ +EG+ + A LL +M K G+ P+ I YT II LCK GK+ A
Sbjct: 272 GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 331
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F ++ GI D LI+G C+ ++ A + +M+ RG P +TYN +I G
Sbjct: 332 FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391
Query: 122 LIVEKKLSVASRV 134
L + ++S A V
Sbjct: 392 LCMAGRVSEADEV 404
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+++T+T ++ + G + A L +++ +GI D Y T+I +C+ G + A
Sbjct: 307 GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRA 366
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ DM ++GI P +++ N +ING C + RVSEA ++ S+G D +TY+ ++
Sbjct: 367 FSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDS 421
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
I + + + + +E +D IL+ A
Sbjct: 422 YIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKA 456
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
++P++VT+T LV A + G D + L+ ++ G D +FY+ I K G + A
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+MVE+G+ DV+S + LI+G K V EA+ L +M G P+ +TY IIRGL
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGL 322
Query: 123 IVEKKLSVASRVWGQMMEKGFTLD 146
KL A ++ +++ G +D
Sbjct: 323 CKMGKLEEAFVLFNRILSVGIEVD 346
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P VT+ IL++ +EG A+KLLD M G+ P+ I Y +I+ CK G+ A
Sbjct: 720 GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDA 779
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + + PD + +++I G+CK + EA+ ++ E + + D + +I+G
Sbjct: 780 MRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKG 839
Query: 122 LIVEKKLSVASRVWGQMM 139
+ ++ A + +M+
Sbjct: 840 FCTKGRMEEARGLLREML 857
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 73/145 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ + +T+ L+ ++G A +L D + +G+ P + Y +I +LCK G A
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MV +G+ P++I N++++G+CK + +AM++ PD T + +I+G
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKG 804
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ + A V+ + +K + D
Sbjct: 805 YCKKGDMEEALSVFTEFKDKNISAD 829
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++ DV+T++ L++++++ + D ++ + + I D + ++ G G A
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ M E + PD + +I G+CK+ ++ EA++++ E++ + V YN II
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR-KSSVSAAVCYNRIIDA 525
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEIL---ISANSRD 160
L + L A+ V ++ EKG LD S L I AN D
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGD 567
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 39 SPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQ 98
S D I YT II LCK G + A + +G+ + I+ N+LING C+ + EA++
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALR 711
Query: 99 LYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
L++ +++ G P EVTY ++I L E A ++ M+ KG
Sbjct: 712 LFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGL 756
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 3/164 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISP--DRIFYTTIIGHLCKSGKI 58
+G P +TF L+ F+ +G D A ++L+ MT ++ D + +I CK GK
Sbjct: 128 HGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKP 187
Query: 59 GLAHTIFCDMVEQGI-PPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNL 117
LA F V+ G+ P++++ L++ C+ +V E L ++ G D V Y+
Sbjct: 188 ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN 247
Query: 118 IIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
I G L A +M+EKG D + ILI S++
Sbjct: 248 WIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEG 291
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DV+ +TI++ +EG A L G++ + I Y ++I LC+ G + A +F
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI-- 123
+ G+ P ++ LI+ CK +A +L + M S+G P+ + YN I+ G
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 124 --VEKKLSVASR-VWGQMMEKGFTL 145
E + V SR + G++ FT+
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTV 798
>AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13454853-13456418 FORWARD
Length = 521
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+VVTF L+ F R A K+ +M + ++P+ + Y T+I + G +A
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DMV GI D+++ NALI G CK + +A Q +E+ P+ T++ +I G
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMG 422
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRD 160
V K ++ M+ G + +L+SA R+
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+ T +++ + R G D +LL M ++G + Y T+I C+ G + A
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M + G+ P+V++ N LI+GFC++ ++ EA +++ EM++ P+ VTYN +I G
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILI-----SANSRDAA 162
+ +A R + M+ G D LI A +R AA
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G LP V + + + L +G DIA + +M + ISP+ ++ C+SGK+
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DM G +S N LI G C+ +S A++L M G P+ VT+N +I G
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 122 LIVEKKLSVASRVWGQM 138
KL AS+V+G+M
Sbjct: 318 FCRAMKLQEASKVFGEM 334
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
V++ L+ +G A KL + M K G+ P+ + + T+I C++ K+ A +F +
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
M + P+ ++ N LING+ + A + YE+M G D +TYN +I GL + K
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 128 LSVASR 133
A++
Sbjct: 394 TRKAAQ 399
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 55/112 (49%)
Query: 32 QMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSF 91
QM G P + L G++ +A + +M I P+ + N +++G+C+S
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 92 RVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
++ + ++L ++M+ G +V+YN +I G + LS A ++ M + G
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL 304
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
GILP+VVT T LV+ + + G + A + L++M +G+ P Y +I + G
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQ 602
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F M G+ P +++ N+LIN F + R +EA + + M+ G PD VTY +++
Sbjct: 603 AVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMK 662
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
LI K V+ +M+ G DR +L SA
Sbjct: 663 ALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ P+ F+ L+ F G ++L +M +G+ PDR FY +I K + A
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
T F M+ +GI PD ++ N LI+ CK R A +++E M+ RG P TYN++I
Sbjct: 465 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 524
Query: 123 IVEKKLSVASRVWGQMMEKG 142
+++ R+ G+M +G
Sbjct: 525 GDQERWDDMKRLLGKMKSQG 544
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD + ++++ F + D A D+M GI PDR+ + T+I CK G+ +A
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+F M +G P + N +IN + R + +L +M+S+G P+ VT+ ++
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI P + L++ +++ G A+ ++ +M K G+SPD Y+ +I +G+
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +M + P+ + L+ GF + Q+ +EM+S G PD YN++I
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L A + +M+ +G DR LI + +
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCK 491
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DV ++ F + G A +LL G+S +II L SG+ A +F
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
++ + GI P + NAL+ G+ K+ + +A + EM+ RG PDE TY+L+I +
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 126 KKLSVASRVWGQMMEKG 142
+ A R+ + ME G
Sbjct: 388 GRWESA-RIVLKEMEAG 403
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD T+++L++A++ G + A+ +L +M + P+ ++ ++ G+
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M G+ PD N +I+ F K + AM ++ M S G PD VT+N +I
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ VA ++ M +G
Sbjct: 489 HCKHGRHIVAEEMFEAMERRG 509
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 69/153 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ T ++ A G + A+ L +++ + GI P Y ++ K+G + A
Sbjct: 299 GLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 358
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M ++G+ PD + + LI+ + + R A + +EM++ P+ ++ ++ G
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ +V +M G DR ++I
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 451
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 2/158 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSD--IAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKI 58
+G D V +++++++ R D + +L ++ + + D II KSG
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A + G+ + ++I+ S R EA L+EE++ G P YN +
Sbjct: 286 SKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNAL 345
Query: 119 IRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
++G + L A + +M ++G + D +LI A
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 383
>AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3948886-3950859 FORWARD
Length = 657
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMG---ISPDRIFYTTIIGHLCKSGKI 58
G+ P+VV+F ++++ + G A +LL +M M +SP+ + Y ++I CK+G++
Sbjct: 248 GVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRL 307
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
LA I DMV+ G+ + + AL++ + ++ EA++L +EM S+G + V YN I
Sbjct: 308 DLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSI 367
Query: 119 IRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ L +E + A V M K +DR I++ R+
Sbjct: 368 VYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNG 410
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 76/138 (55%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
T+ LV+A+ R GSSD A +L D+MT G+ + + Y +I+ L G I A ++ DM
Sbjct: 328 TYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM 387
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
+ + D + ++ G C++ V EA++ ++ + D V +N ++ + +KKL
Sbjct: 388 NSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKL 447
Query: 129 SVASRVWGQMMEKGFTLD 146
+ A ++ G M+ +G +LD
Sbjct: 448 ACADQILGSMLVQGLSLD 465
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Query: 28 KLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGF 87
K+ +M +G + + +I CK K+ A ++F M++ G+ P+V+S N +I+G
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 88 CKSFRVSEAMQLYEEM-QSRGPY--PDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFT 144
CK+ + A+QL +M G + P+ VTYN +I G +L +A R+ G M++ G
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 145 LDRANSEILISANSRDAAS 163
+ L+ A R +S
Sbjct: 324 CNERTYGALVDAYGRAGSS 342
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMG--ISPDRIFYTTIIGHLCKSGKIGLA 61
+ D+VT+ L+ L+ G+ + A +L +M K S + + +I HLCK G A
Sbjct: 529 IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKA 588
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ MVE+G+ PD I+ LI F K + ++L++ + +G P E Y I+R
Sbjct: 589 KEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRP 648
Query: 122 LI 123
L+
Sbjct: 649 LL 650
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D ++F L++ +L+EG + A ++ D M KM + + + Y +I+ L K G G A
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDE--VTYNLII 119
+ M D+++ N L+N K+ V EA + +MQ + VT+N++I
Sbjct: 521 EAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L A V M+E+G D LI++ S+
Sbjct: 577 NHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSK 616
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D T I+V R G A + Q+++ + D + + T++ H + K+ A I
Sbjct: 395 DRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQIL 454
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
M+ QG+ D IS LI+G+ K ++ A+++Y+ M + V YN I+ GL
Sbjct: 455 GSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGL 511
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDV F LV A + G + A ++++Q G +G L +I
Sbjct: 145 GSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M G +V + N +I FCK ++ EA+ ++ M G +P+ V++N++I G
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 122 LIVEKKLSVASRVWGQM 138
+ A ++ G+M
Sbjct: 263 ACKTGDMRFALQLLGKM 279
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
++ D+V L+ F+R+ A ++L M G+S D I + T+I K GK+ A
Sbjct: 427 LVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERAL 486
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
I+ M++ +++ N+++NG K A + M+ + D VTYN ++
Sbjct: 487 EIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNES 542
Query: 123 I----VEKKLSVASRVWGQMMEKGFTL 145
+ VE+ + S++ Q EK +L
Sbjct: 543 LKTGNVEEADDILSKMQKQDGEKSVSL 569
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 68/119 (57%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ PD +TF L+ R G + A+ L D+MT I D Y T++ +CK G++ L
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A I M + I P+V+S + +I+GF K+ R EA+ L+ EM+ G D V+YN ++
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSS-DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G+ P++VT+ +++A + G K D+M + G+ PDRI + +++ + G
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F +M + I DV S N L++ CK ++ A ++ +M + P+ V+Y+ +I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
G + A ++G+M G LDR + L+S
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I+P+VV+++ +++ F + G D A L +M +GI+ DR+ Y T++ K G+ A
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I +M GI DV++ NAL+ G+ K + E +++ EM+ P+ +TY+ +I G
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI DVVT+ L+ + ++G D KK+ +M + + P+ + Y+T+I K G A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
IF + G+ DV+ +ALI+ CK+ V A+ L +EM G P+ VTYN II
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI D V++ L+ + + G S+ A +L +M +GI D + Y ++G K GK
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M + + P++++ + LI+G+ K EAM+++ E +S G D V Y+ +I
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L + A + +M ++G + + +I A R A
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 11 TILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVE 70
+ ++ R G IAK++ + G ++ +I +SG A ++F M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 71 QGIPPDVISCNALINGFCK-SFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
G+ P++++ NA+I+ K + + ++EMQ G PD +T+N ++
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL 346
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P + TFT L+ R G A KL ++M + + P+R+ Y +I C+ G + A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+M E+GI PD S LI+G C + + SEA + + +E+ Y ++ G
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISAN 157
E KL A V +M+++G LD +LI +
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+ VT++IL++ F R G D A L +M G+ Y ++I CK G I A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+M+ + + P V++ +L+ G+C ++++A++LY EM +G P T+ ++ G
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + A +++ +M E +R ++I
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+L + T+ +L+ F R+G + A +L+ +M G+SPD I YTT+I LC+ + A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
++ M E+GI PD ++ N LI+G C + + +A +L EM +G P+ T
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P VVT+T L+ + +G + A +L +MT GI+P +TT++ L ++G I A +
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M E + P+ ++ N +I G+C+ +S+A + +EM +G PD +Y +I GL +
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 125 EKKLSVASRVWGQMMEKG 142
+ S A +V+ + KG
Sbjct: 590 TGQASEA-KVFVDGLHKG 606
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 76/141 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P++ + L+++ + A+ L D+M K+G+ P+ + Y+ +I C+ GK+ A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +MV+ G+ V N+LING CK +S A EM ++ P VTY ++ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ K++ A R++ +M KG
Sbjct: 482 YCSKGKINKALRLYHEMTGKG 502
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVVT+ LV + +I +++D+M + SP ++++ L K GKI A +
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+V+ G+ P++ NALI+ CK + EA L++ M G P++VTY+++I
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 414
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
KL A G+M++ G L LI+ + +
Sbjct: 415 RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ P+ VT+ +++E + EG A + L +MT+ GI PD Y +I LC +G+ A
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA- 596
Query: 63 TIFCDMVEQG-IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F D + +G + I L++GFC+ ++ EA+ + +EM RG D V Y ++I G
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ K + + +M ++G D +I A S+
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKL-LDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+P+ VT+ ++ L +G D+ K + L G+ + Y +I C+ G+I A
Sbjct: 749 VPNQVTYGCFLD-ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M+ G+ PD I+ +IN C+ V +A++L+ M +G PD V YN +I G
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISANS 158
V ++ A+ + +M+ +G + S S ++
Sbjct: 868 CVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDT 903
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 35/190 (18%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD V +T +++A + G A + D M G P+ + YT +I LCK+G + A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 62 HTI------------------FCDMVE-----------------QGIPPDVISCNALING 86
+ F D++ +G+ + + N LI G
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 87 FCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
FC+ R+ EA +L M G PD +TY +I L + A +W M EKG D
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 147 RANSEILISA 156
R LI
Sbjct: 857 RVAYNTLIHG 866
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+LP+V T + L+ ++ +A +L + M +GI PD YT +I LC+ + A
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M G +++ N LI+G CK +V EA+ + +++ + PD VTY ++ GL
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
++ + +MM++ L + SE +S+
Sbjct: 308 CKVQEFEIGL----EMMDEMLCLRFSPSEAAVSS 337
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D+V + +L++ L+ + LL +M G+ PD + YT++I K+G A
Sbjct: 642 GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
I+ M+ +G P+ ++ A+ING CK+ V+EA L +MQ P++VTY +
Sbjct: 702 FGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI+PD ++ L+ G + AK +D + K + I YT ++ C+ GK+ A
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +MV++G+ D++ LI+G K L +EM RG PD+V Y +I
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
A +W M+ +G
Sbjct: 692 KSKTGDFKEAFGIWDLMINEG 712
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD +T+T ++ R A +L + MT+ GI PDR+ Y T+I C +G++G
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Query: 61 AHTIFCDMVEQGIPPD 76
A + +M+ QG+ P+
Sbjct: 876 ATELRNEMLRQGLIPN 891
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
+ +T L+ F REG + A + +M + G+ D + Y +I K L + +
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
M ++G+ PD + ++I+ K+ EA +++ M + G P+EVTY +I GL
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PDV +T ++ + AK+++ M G + + Y +I LCK K+ A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I D+ + + PDV++ L+ G CK +++ +EM P E + ++ G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 122 L----IVEKKLSVASRV 134
L +E+ L++ RV
Sbjct: 342 LRKRGKIEEALNLVKRV 358
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 10 FTILVEAFLREGSSDIAKKLLD-------QMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
F +L++ ++R ++++LD +TK+ + P+ + ++ L K GLA
Sbjct: 159 FDLLIQHYVR------SRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAM 212
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F DMV GI PDV +I C+ +S A ++ M++ G + V YN++I GL
Sbjct: 213 ELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGL 272
Query: 123 IVEKKL 128
++K+
Sbjct: 273 CKKQKV 278
>AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25041901-25044849 REVERSE
Length = 982
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
+PDV T+ I+V ++ D A ++D M ++G+ P Y++IIG L K G++ A
Sbjct: 544 VPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEE 603
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
F M+E GI PD I+ +IN + ++ R+ EA +L EE+ P TY ++I G +
Sbjct: 604 TFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFV 663
Query: 124 VEKKLSVASRVWGQMMEKGFT 144
+ + +M+E G +
Sbjct: 664 KMGMMEKGCQYLDKMLEDGLS 684
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI+P++VT+TIL+++ + G + A +D PD++ Y+T++ LC + A
Sbjct: 824 GIVPNLVTYTILMKSHIEAGDIESA---IDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDA 880
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M + GI P+ S L+ C S EA+++ ++M + +P + + +I
Sbjct: 881 LALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYI 940
Query: 122 LIVEKKLSVASRVWGQMMEKGFTL 145
L EKKL A ++ M++ G +L
Sbjct: 941 LCEEKKLREARALFAIMVQSGRSL 964
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P T+T+L+ F++ G + + LD+M + G+SP+ + YT +IGH K G + T+
Sbjct: 650 PSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTL 709
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEE 102
F M E I D I+ L++G ++ + Q+ E
Sbjct: 710 FGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVE 747
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D F L+ F++ G D + + QM K G+ + Y +IG CK G + A +F
Sbjct: 306 DPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF 365
Query: 66 CDMV-EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ + I +V LI GF K + +A+ L M G PD +TY ++++ L
Sbjct: 366 VNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPK 425
Query: 125 EKKLSVASRVWGQMMEKG 142
+L A + +++ G
Sbjct: 426 CHELKYAMVILQSILDNG 443
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI PD + + I++ + R G D A +L++++ K + P YT +I K G +
Sbjct: 611 SGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEK 670
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
M+E G+ P+V+ ALI F K + L+ M D + Y ++
Sbjct: 671 GCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLS 730
Query: 121 GL 122
GL
Sbjct: 731 GL 732
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P V ++ ++ + ++G A++ +M + GI PD I Y +I ++G+I A
Sbjct: 577 GLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEA 636
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + ++V+ + P + LI+GF K + + Q ++M G P+ V Y +I
Sbjct: 637 NELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGH 696
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
+ + + ++G M E D L+S R A
Sbjct: 697 FLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMA 737
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP V + L F + G + A+ L D M G D++ YT ++ CK + +A
Sbjct: 235 LP-VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMR 293
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
++ MVE+ D N LI+GF K + + ++ +M +G + TY+++I
Sbjct: 294 LYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYC 353
Query: 124 VEKKLSVASRVW 135
E + A R++
Sbjct: 354 KEGNVDYALRLF 365
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 36/182 (19%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NGI+PD +V ++ D A+ LD++ G +P R + ++ LC +
Sbjct: 125 NGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLE 184
Query: 61 AHTIFCDMVEQGIPPDVISCNALING---------------------------------- 86
A F + E+G + C L G
Sbjct: 185 AFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLF 244
Query: 87 --FCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFT 144
FCK +EA L++ M+ G Y D+V Y +++ + +++A R++ +M+E+ F
Sbjct: 245 YCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFE 304
Query: 145 LD 146
LD
Sbjct: 305 LD 306
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P ++ +++ +E + L++ + ++ PD Y ++ LCK A
Sbjct: 507 GCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAA 566
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
I M E G+ P V +++I K RV EA + + +M G PDE+ Y ++I
Sbjct: 567 FAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMI 624
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G D V +T L++ + ++ + +A +L +M + D + T+I K G +
Sbjct: 266 DGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDK 325
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLY-----EEMQSRGPYPDEVTY 115
+F M+++G+ +V + + +I +CK V A++L+ E SR + Y
Sbjct: 326 GRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVH----CY 381
Query: 116 NLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+I G + + A + +M++ G D +L+
Sbjct: 382 TNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLL 420
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 21 GSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISC 80
GS A +++ ++ K I P+ + TII C +G++ A+ M ++GI P++++
Sbjct: 774 GSKSFAMEVIGKVKK-SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTY 832
Query: 81 NALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMME 140
L+ ++ + A+ L+E PD+V Y+ +++GL K+ A + +M +
Sbjct: 833 TILMKSHIEAGDIESAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALMLEMQK 889
Query: 141 KGFTLDRANSEILI 154
G ++ + E L+
Sbjct: 890 SGINPNKDSYEKLL 903
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ P+V T I++ + G D K+ ++M + D Y+++I LC +G + A
Sbjct: 251 VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAE 310
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
++F ++ E+ DV++ N ++ GFC+ ++ E+++L+ M+ + + V+YN++I+GL
Sbjct: 311 SVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGL 369
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ K+ A+ +W M KG+ D+ I I
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHG 403
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P VV++ IL+ + G A + +M + G PD Y+ ++ LC+ KI L
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ ++ G+ DV+ N LI+G C ++ +AM + M+ R + VTYN ++
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
G + A+ +WG M + G D
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPD 638
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DV + +++ ++ + A L+ +M+K G+ + +IG L + ++G A
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+M + G P V+S N LI G CK+ + EA +EM G PD TY++++ GL +
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+K+ +A +W Q ++ G D ILI
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P + ++ L+ AF+ + L G++P+ Y +I CK + A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
M ++G PDV S + +IN K+ ++ +A++L++EM RG PD YN++I G
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 122 LIVEKKLSVASRVWGQMME 140
+ EK A +W +++E
Sbjct: 229 FLKEKDHKTAMELWDRLLE 247
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 36/181 (19%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P++ T+ +L++ ++ + A+ LD M K G PD Y+T+I L K+GK+ A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSF------------------------------ 91
+F +M E+G+ PDV N LI+GF K
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 92 ------RVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
RV + ++++E M+ D TY+ +I GL + A V+ ++ E+ ++
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 146 D 146
D
Sbjct: 324 D 324
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G D T+ I + G + A ++ ++ G D Y +II LCK ++ A
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M + G+ + CNALI G + R+ EA EM G P V+YN++I G
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRD 160
L K AS +M+E G+ D IL+ RD
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG PD+ T++IL+ R+ D+A +L Q + G+ D + + +I LC GK+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A T+ +M + ++++ N L+ GF K + A ++ M G PD ++YN I++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 121 GLIVEKKLSVA 131
GL + + +S A
Sbjct: 648 GLCMCRGVSYA 658
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
L+ +R+ A L +M K G P + Y +I LCK+GK G A +M+E G
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVAS 132
PD+ + + L+ G C+ ++ A++L+ + G D + +N++I GL KL A
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 133 RVWGQMMEKGFT 144
V M + T
Sbjct: 590 TVMANMEHRNCT 601
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
++V++ IL++ L G D A + M G + D+ Y I LC +G + A +
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
++ G DV + ++I+ CK R+ EA L +EM G + N +I GLI +
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 126 KKLSVASRVWGQMMEKG 142
+L AS +M + G
Sbjct: 478 SRLGEASFFLREMGKNG 494
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 1/156 (0%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DVVT+ ++ F R G + +L M S + + Y +I L ++GKI A I+
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIW 382
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M +G D + I+G C + V++A+ + +E++S G + D Y II L +
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
K+L AS + +M + G L+ LI RD+
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N D VT+ LV A++R G S A +++ MTK G+ P+ I YTT+I K+GK
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F M E G P+ + NA+++ K R +E +++ +M+S G P+ T+N ++
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML- 463
Query: 121 GLIVEKKL-SVASRVWGQMMEKGFTLDRANSEILISANSR 159
L K + +RV+ +M GF DR LISA R
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGR 503
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PD+V F ++ F R D A+ +L+ + + G+SPD + Y +++ + G+
Sbjct: 625 HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWK 684
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A I + + + PD++S N +I GFC+ + EA+++ EM RG P TYN +
Sbjct: 685 AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Query: 121 G 121
G
Sbjct: 745 G 745
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 69/131 (52%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD+VT+ L++ ++R G A+++L + K + PD + Y T+I C+ G +
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQE 719
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +M E+GI P + + N ++G+ +E + E M P+E+T+ +++
Sbjct: 720 AVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVD 779
Query: 121 GLIVEKKLSVA 131
G K S A
Sbjct: 780 GYCRAGKYSEA 790
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 74/154 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P VT+ L++ F + G A +L +M + D + Y ++ ++G A
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M ++G+ P+ I+ +I+ + K+ + EA++L+ M+ G P+ TYN ++
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
L + + + ++ M G + +RA +++
Sbjct: 431 LGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLL---DQMTKMGISPDRIFYTTIIGHLCKSGKI 58
G P +VT+ ++++ F + G S +K+L D+M G+ D +T++ + G +
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRS--WRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLL 297
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A F ++ G P ++ NAL+ F K+ +EA+ + +EM+ D VTYN +
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357
Query: 119 IRGLIVEKKLSVASRVWGQMMEKG 142
+ + A+ V M +KG
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKG 381
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+V++ +++ F R G A ++L +MT+ GI P Y T + G +
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGP-YPDEVTYNLIIR 120
M + P+ ++ +++G+C++ + SEAM ++++ P + D+ L +R
Sbjct: 759 IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLALR 815
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +P+ T+ ++ ++ S+ K+L M G SP+R + T++ G
Sbjct: 416 GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFV 475
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +F +M G PD + N LI+ + + +A ++Y EM G TYN ++
Sbjct: 476 NRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
L + V M KGF
Sbjct: 536 LARKGDWRSGENVISDMKSKGF 557
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D T + ++ A REG AK+ ++ G P + Y ++ K+G A
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M E P D ++ N L+ + ++ EA + E M +G P+ +TY +I
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
K A +++ M E G
Sbjct: 396 YGKAGKEDEALKLFYSMKEAG 416
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 66/140 (47%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P + L+ A + + +++ K G PD + + +++ ++ A
Sbjct: 592 IFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAE 651
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
I + E G+ PD+++ N+L++ + + +A ++ + ++ PD V+YN +I+G
Sbjct: 652 GILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF 711
Query: 123 IVEKKLSVASRVWGQMMEKG 142
+ A R+ +M E+G
Sbjct: 712 CRRGLMQEAVRMLSEMTERG 731
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P+ T+ ++ +G ++ +M G PDR + T+I + G
Sbjct: 450 NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVD 509
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ +M G V + NAL+N + + +M+S+G P E +Y+L+++
Sbjct: 510 ASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ 569
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 12 ILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQ 71
I V RE +A KLLD++ D YTTI+ ++GK A +F M E
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 72 GIPPDVISCNALINGFCKSFRV-SEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSV 130
G P +++ N +++ F K R + + + +EM+S+G DE T + ++ E L
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 131 ASRVWGQMMEKGF 143
A + ++ G+
Sbjct: 300 AKEFFAELKSCGY 312
>AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13490251-13491458 FORWARD
Length = 369
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+V+TF+ L++A+ + G + M +M I P+ Y+++I LC ++ A
Sbjct: 114 INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAI 173
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M+ +G P+V++ + L NGF KS RV + ++L ++M RG + V+ N +I+G
Sbjct: 174 KMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY 233
Query: 123 IVEKKLSVASRVWGQMMEKGF 143
K+ +A V+G M G
Sbjct: 234 FQAGKIDLALGVFGYMTSNGL 254
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD+VT + LV F S A + QM KMGI D + T +I LCK+ + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M ++GI P+V++ ++LI G CKS R+++A + EM S+ P+ +T++ +I
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 122 LIVEKKLSVASRVWGQMME 140
KLS V+ M++
Sbjct: 128 YAKRGKLSKVDSVYKMMIQ 146
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 81/153 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+VVT++ L+ + G A++ L +M I+P+ I ++ +I K GK+
Sbjct: 78 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 137
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+++ M++ I P+V + ++LI G C RV EA+++ + M S+G P+ VTY+ + G
Sbjct: 138 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 197
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
++ ++ M ++G + + LI
Sbjct: 198 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLI 230
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI DVV TIL++ + A ++L +M GISP+ + Y+++I LCKSG++ A
Sbjct: 43 GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 102
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+M + I P+VI+ +ALI+ + K ++S+ +Y+ M P+ TY+ +I G
Sbjct: 103 ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG 162
Query: 122 LIVEKKLSVASRVWGQMMEKGFT 144
L + ++ A ++ M+ KG T
Sbjct: 163 LCMHNRVDEAIKMLDLMISKGCT 185
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+V T++ L+ D A K+LD M G +P+ + Y+T+ KS ++
Sbjct: 149 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 208
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM ++G+ + +SCN LI G+ ++ ++ A+ ++ M S G P+ +YN+++ GL
Sbjct: 209 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 268
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
++ A + M + LD I+I
Sbjct: 269 FANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+VVT++ L F + D KLLD M + G++ + + T+I ++GKI LA
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M G+ P++ S N ++ G + V +A+ +E MQ D +TY ++I G
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 122 L 122
+
Sbjct: 303 M 303
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%)
Query: 32 QMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSF 91
+M K+GI PD + ++++ C S I A + M + GI DV+ LI+ CK+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 92 RVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSE 151
V A+++ + M+ RG P+ VTY+ +I GL +L+ A R +M K +
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 152 ILISANSR 159
LI A ++
Sbjct: 123 ALIDAYAK 130
>AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23106600-23108399 REVERSE
Length = 599
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G+ PD+V +++E LR A KL M G P+ YT +I CK +
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F DMV+ G+ PD LI GF ++ +L +EMQ +G PD TYN +I+
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 121 GLIVEKKLSVASRVWGQMME 140
+ +K A+R++ +M++
Sbjct: 447 LMANQKMPEHATRIYNKMIQ 466
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G P+V ++TI++ F ++ S + A + D M G+ PD YT +I K+
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ + +M E+G PPD + NALI A ++Y +M P T+N+I++
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ + + VW +M++KG D + +LI
Sbjct: 482 SYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLI 515
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFC 66
V T L+++ R A+ L D++ K +P+ + YT ++ C+ + A I+
Sbjct: 264 VETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 67 DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEK 126
DM++QG+ PD+++ N ++ G +S + S+A++L+ M+S+GP P+ +Y ++IR +
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 127 KLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A + M++ G D A LI+
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+++T+T+L+ + R + A ++ + M G+ PD + + ++ L +S K A +
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M +G P+V S +I FCK + A++ +++M G PD Y +I G
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 125 EKKLSVASRVWGQMMEKGFTLD--RANSEILISANSR 159
+KKL + +M EKG D N+ I + AN +
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK 452
>AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-10672740
REVERSE
Length = 806
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G++PD VT+ L+ + +D A L + G D++ Y+ I+ LCK G++
Sbjct: 377 HGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSE 436
Query: 61 AHTIFCDMVEQG-IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A + +M+ +G PPDV++ A++NGFC+ V +A +L + M + G P+ V+Y ++
Sbjct: 437 AKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALL 496
Query: 120 RGLIVEKKLSVASRVWGQMMEKGF 143
G+ K S+ +R M E+ +
Sbjct: 497 NGMCRTGK-SLEAREMMNMSEEHW 519
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMG-ISPDRIFYTTIIGHLCKSGKIGL 60
G D + ++ +V A +EG AK L+++M G PD + YT ++ C+ G++
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M G P+ +S AL+NG C++ + EA ++ + P+ +TY++I+
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
GL E KLS A V +M+ KGF +L+ + RD +
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRT 575
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVVT+T +V F R G D AKKLL M G P+ + YT ++ +C++GK A +
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
E P+ I+ + +++G + ++SEA + EM +G +P V NL+++ L
Sbjct: 512 MNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ + A + + + KG ++ N +I
Sbjct: 572 DGRTHEARKFMEECLNKGCAINVVNFTTVIHG 603
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI F+ ++ ++ R G A K+L M + G+ P+ + T I ++ ++ A
Sbjct: 237 GIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA 296
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
M GI P+V++ N +I G+C RV EA++L E+M S+G PD+V+Y I+
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356
Query: 122 LIVEKKLSVASRVWGQMM-EKGFTLDRANSEILI 154
L EK++ + +M E G D+ LI
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLI 390
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTK-MGISPDRIFYTTIIGHLCKSGKIGL 60
G LPD V++ ++ +E + L+ +M K G+ PD++ Y T+I L K
Sbjct: 342 GCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADE 401
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY-PDEVTYNLII 119
A D E+G D + +A+++ CK R+SEA L EM S+G PD VTY ++
Sbjct: 402 ALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVV 461
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
G ++ A ++ M G + + L++ R S
Sbjct: 462 NGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G P+ V++T L+ R G S A+++++ + SP+ I Y+ I+ L + GK+
Sbjct: 483 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSE 542
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +MV +G P + N L+ C+ R EA + EE ++G + V + +I
Sbjct: 543 ACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIH 602
Query: 121 GLIVEKKLSVASRVWGQM 138
G +L A V M
Sbjct: 603 GFCQNDELDAALSVLDDM 620
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 62/118 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P V +L+++ R+G + A+K +++ G + + + +TT+I C++ ++ A
Sbjct: 554 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 613
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
++ DM DV + L++ K R++EA +L ++M +G P VTY +I
Sbjct: 614 LSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 70/138 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+ +T+++++ REG A ++ +M G P + ++ LC+ G+ A
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 581
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ + +G +V++ +I+GFC++ + A+ + ++M + D TY ++ L
Sbjct: 582 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGK 641
Query: 125 EKKLSVASRVWGQMMEKG 142
+ +++ A+ + +M+ KG
Sbjct: 642 KGRIAEATELMKKMLHKG 659
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 71/144 (49%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D + + ++E + ++++L M + GI ++ ++ ++G++ A +
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M G+ P+++ CN I+ F ++ R+ +A++ E MQ G P+ VTYN +IRG
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 126 KKLSVASRVWGQMMEKGFTLDRAN 149
++ A + M KG D+ +
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVS 349
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P VT+ ++ + + G D +L++M + R Y +I LC GK+ A
Sbjct: 659 GIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM--ISRQKCRTIYNQVIEKLCVLGKLEEA 716
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
T+ ++ D +C AL+ G+ K A ++ M +R PD + +
Sbjct: 717 DTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKR 776
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L+++ K+ A ++ +++E+G
Sbjct: 777 LVLKGKVDEADKLMLRLVERG 797
>AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18097048-18099027 FORWARD
Length = 659
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKI-- 58
+G P+V T+ +L++A + D AKKLL +M+ G PD + YTT+I +C+ G +
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
Query: 59 --------------------GL--------AHTIFCDMVEQGIPPDVISCNALINGFCKS 90
GL A + +MVE+GI P+VIS + LIN C S
Sbjct: 235 GRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS 294
Query: 91 FRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
++ A +M RG +P+ T + +++G + A +W QM+ +GF L
Sbjct: 295 GQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGFGLQ 349
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G P+VV +T +VEA R A+ L++ M+K +P + I LC +G++
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 61 AHTIFCDMVEQG-IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A +F M +Q PP++++ N L++G K+ R+ EA L E+ RG TYN ++
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
G +A ++ G+MM G + D ++I A + +
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKA 579
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P V + L+ +E A +L+ +M + GISP+ I Y+T+I LC SG+I LA +
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM-QSRGPYPDEVTYNLIIRGLI 123
M+++G P++ + ++L+ G +A+ L+ +M + G P+ V YN +++G
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 124 VEKKLSVASRVWGQMMEKG 142
+ A V+ M E G
Sbjct: 364 SHGNIVKAVSVFSHMEEIG 382
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P++ T+ L+ F + GS D A + ++M G P+ + YT ++ LC+ K A
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM--QSRGPYPDEVTYNLII 119
++ M ++ P V + NA I G C + R+ A +++ +M Q R P P+ VTYN ++
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP-PNIVTYNELL 500
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISAN 157
GL ++ A + ++ +G + L+ +
Sbjct: 501 DGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+VV + LV+ F G+ A + M ++G SP+ Y ++I K G + A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I+ M+ G P+V+ ++ C+ + EA L E M P T+N I+G
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 122 LIVEKKLSVASRVWGQMMEK 141
L +L A +V+ QM ++
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQ 486
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTK-MGISPDRIFYTTIIGHLCKSGKIGL 60
G P++ T + LV+ G++ A L +QM + G+ P+ + Y T++ C G I
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++F M E G P++ + +LINGF K + A+ ++ +M + G P+ V Y ++
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 121 GLIVEKKLSVA 131
L K A
Sbjct: 431 ALCRHSKFKEA 441
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 30/171 (17%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P V + +++ L E + + M + G P+ Y ++ LCK+ K+ A
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 62 HTIFCDMVEQGIPPDVIS--------C----------------------NALINGFCKSF 91
+ +M +G PD +S C NALING CK
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEH 260
Query: 92 RVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
A +L EM +G P+ ++Y+ +I L ++ +A QM+++G
Sbjct: 261 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 57/113 (50%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
F ++ + + G ++ A ++ ++ + G P Y ++ L +I + + ++ DM
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 173
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
G P+V + N L+ CK+ +V A +L EM ++G PD V+Y +I +
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSM 226
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
+TF +++ +G D + LL QM G + ++I + G A +F
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
+ E G P V N +++ R+ +Y +M+ G P+ TYN++++ L K
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 128 LSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A ++ +M KG D + +IS+
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
T+ L+ G IA +L+ +M G SPD I II CK GK A + D+
Sbjct: 530 TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DL 588
Query: 69 VEQG---IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
V G PDVIS +I G C+S + + L E M S G P T++++I I++
Sbjct: 589 VSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILD 648
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P++VT+ L++ + + A L ++ G+ Y T++ C +G G+A +
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS--RGPYPDEVTYNLIIRGL 122
M+ G PD I+ N +I +CK + A Q+ + + R PD ++Y +I GL
Sbjct: 551 VGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGL 610
>AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18941118-18942524 FORWARD
Length = 468
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+V++ L+ + ++G+ D LL+++ G+ PD +T I+ L G G A
Sbjct: 293 DIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+ E G+ P V++CN LI+G CK+ V AM+L+ M+ R DE TY ++ L +
Sbjct: 353 ACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKD 408
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+L AS++ KG + + ++S
Sbjct: 409 GRLVCASKLLLSCYNKGMKIPSSARRAVLSG 439
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 83/157 (52%), Gaps = 2/157 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKM-GISPDRIFYTTIIGHLCKSGKIG 59
+G+ PD+ ++ L+ + + G A K+L + + G+ P Y ++ LCKSG
Sbjct: 112 SGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTD 171
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A +F ++ + P++++ N LING CKS RV + E++ G P+ VTY ++
Sbjct: 172 NAIELF-KHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTML 230
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ K++ +++ +M ++G+T D + ++SA
Sbjct: 231 KMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSA 267
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 37/179 (20%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+LPDV+T+ L++ + R D A + +M + GI PD Y ++I K+ +
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 62 HTIFCDMVEQGIPPD------VISC------------------------------NALIN 85
+F +M+ G+ PD ++SC N L++
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLD 162
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFT 144
CKS A++L++ ++SR P+ +TYN++I GL +++ + ++ + G+T
Sbjct: 163 ALCKSGHTDNAIELFKHLKSRVK-PELMTYNILINGLCKSRRVGSVDWMMRELKKSGYT 220
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P + T+ IL++A + G +D A +L + K + P+ + Y +I LCKS ++G
Sbjct: 149 GLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSV 207
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ ++ + G P+ ++ ++ + K+ R+ + +QL+ +M+ G D ++
Sbjct: 208 DWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSA 267
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANS 158
LI + A +++ G S+ ++S N+
Sbjct: 268 LIKTGRAEEAYECMHELVRSG-----TRSQDIVSYNT 299
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
A+ LL ++G+ PD I Y T+I + I A+ + M E GI PDV + N+LI+
Sbjct: 32 AETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLIS 91
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
G K+ ++ +QL++EM G PD +YN ++
Sbjct: 92 GAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLM 125
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%)
Query: 49 IGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGP 108
+ LCK + A T+ D + G+ PDVI+ N LI G+ + + EA + M+ G
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 109 YPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
PD TYN +I G L+ +++ +M+ G + D + L+S
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMS 126
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD T TI+V L G++ A+K L + +MG+ P + +I LCK+G + A
Sbjct: 324 GLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRA 383
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG 107
+F M + D + ++++ CK R+ A +L ++G
Sbjct: 384 MRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKG 425
>AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2399117-2400496 REVERSE
Length = 459
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 83/151 (54%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+ V+F IL++ FL + + A K+ D+M +M + P + Y ++IG LC++ +G A ++
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
DM+++ I P+ ++ L+ G C +EA +L +M+ RG P V Y +++ L
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
++ A + G+M ++ D IL++
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 65/120 (54%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+ VTF +L++ +G + AKKL+ M G P + Y ++ L K G+I A
Sbjct: 252 IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAK 311
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M ++ I PDV+ N L+N C RV EA ++ EMQ +G P+ TY ++I G
Sbjct: 312 LLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P +V + IL+ + G D AK LL +M K I PD + Y ++ HLC ++ A
Sbjct: 286 GCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEA 345
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + +M +G P+ + +I+GFC+ + + M + P T+ ++ G
Sbjct: 346 YRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAG 405
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
LI L A V M +K + + L+S
Sbjct: 406 LIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLS 439
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 83/155 (53%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+V T+T ++ + +E + A+ L +M + G+ P+ YTT+I CK+G G A+ +
Sbjct: 957 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 1016
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M ++G P++ + NA I+ CK R EA +L + S G D VTY ++I+
Sbjct: 1017 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 1076
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ ++ A + +M + GF D + ILI+A R
Sbjct: 1077 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 1111
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 32/189 (16%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G D+ IL+ AF R+ +++L + +G+ P + YT++I CK G I LA
Sbjct: 1094 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 1153
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEV-------- 113
F +M G PD + +LI+G CK V EA +LYE M RG P EV
Sbjct: 1154 LKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYE 1213
Query: 114 ------------------------TYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRAN 149
T ++R L EKK+ VA+ + +++EK + DR
Sbjct: 1214 YCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVT 1273
Query: 150 SEILISANS 158
+A S
Sbjct: 1274 LAAFTTACS 1282
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +PD T T+++ A G + A +M +G P+ I +T++I LCK G I A
Sbjct: 848 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 907
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY-PDEVTYNLIIR 120
+ +MV G P+V + ALI+G CK +A +L+ ++ Y P+ TY +I
Sbjct: 908 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 967
Query: 121 GLIVEKKLSVASRVWGQMMEKGF 143
G E KL+ A ++ +M E+G
Sbjct: 968 GYCKEDKLNRAEMLFSRMKEQGL 990
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++PD ++ ++V R+G A + L M + G PD T I+ LC++G + A
Sbjct: 813 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 872
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F M++ G P++I+ +LI+G CK + +A ++ EEM G P+ T+ +I G
Sbjct: 873 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 932
Query: 122 LIVEKKLSVASRVWGQMMEKGFTL 145
L R W EK F L
Sbjct: 933 L--------CKRGW---TEKAFRL 945
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +P++ T+ +++ ++ + A +LL++ G+ D + YT +I CK I A
Sbjct: 1024 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 1083
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
FC M + G D+ N LI FC+ ++ E+ +L++ + S G P + TY +I
Sbjct: 1084 LAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISC 1143
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
E + +A + + M G D LIS
Sbjct: 1144 YCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 1178
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 69/142 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P +T ++E + G + A+ + D+M+ G+ PD Y ++ + GKI A
Sbjct: 778 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 837
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
M+++G PD +C ++ C++ V+ A+ + +M G P+ + + +I G
Sbjct: 838 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 897
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
L + + A + +M+ G+
Sbjct: 898 LCKKGSIKQAFEMLEEMVRNGW 919
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%)
Query: 56 GKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY 115
G++ A + DM QG+ P I+ N ++ + + A +++EM RG PD +Y
Sbjct: 762 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 821
Query: 116 NLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L++ G + K+ A R M+++GF D A ++++A
Sbjct: 822 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTA 862
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ VTF++L+E F + G + A + +M +G++P TII K K A
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F + E G+ +V CN +++ CK + EA +L +M+SRG P+ V+YN ++ G
Sbjct: 429 LKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLG 487
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRD 160
+K + +A V+ ++EKG + ILI R+
Sbjct: 488 HCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 73/123 (59%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ D+ T+T L++ L++G+ +A +L +M +G+ PD I YT I+ L K G+
Sbjct: 718 DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVK 777
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+F +M + + P+V+ NA+I G + + EA +L++EM +G PD T+++++
Sbjct: 778 VVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Query: 121 GLI 123
G +
Sbjct: 838 GQV 840
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+ T++IL++ R A ++++ MT I + + Y TII LCK G+ A
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKA 567
Query: 62 HTIFCDMVEQG-IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ +M+E+ + +S N++I+GF K + A+ YEEM G P+ +TY ++
Sbjct: 568 RELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
GL ++ A + +M KG LD
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLD 653
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P + L+ F G+ A L +M K G+ D YTT+I L K G + LA
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M G+ PD I ++NG K + + ++++EEM+ P+ + YN +I G
Sbjct: 744 SELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
E L A R+ +M++KG D A +IL+S
Sbjct: 804 HYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
+++ +++ F +EG D A ++M GISP+ I YT+++ LCK+ ++ A + +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
M +G+ D+ + ALI+GFCK + A L+ E+ G P + YN +I G
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 128 LSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ A ++ +M++ G D LI +D
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDG 738
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NGI P+V+T+T L+ + D A ++ D+M G+ D Y +I CK +
Sbjct: 613 NGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMES 672
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F +++E+G+ P N+LI+GF + A+ LY++M G D TY +I
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 732
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
GL+ + L +AS ++ +M G D ++++ S+
Sbjct: 733 GLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSK 771
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 77/141 (54%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
+P T+T ++ A +++G+ D A +L D+M GIS + + T++I CK+ + A
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+F M ++G P+ ++ + LI F K+ + +A++ Y++M+ G P + II+G +
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 124 VEKKLSVASRVWGQMMEKGFT 144
+K A +++ + E G
Sbjct: 421 KGQKHEEALKLFDESFETGLA 441
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTI-IGHLCKSGKIGLAH 62
L +V ++ ++G +D A +LL +M GI P+ + Y + +GH C+ + LA
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGH-CRQKNMDLAR 498
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F +++E+G+ P+ + + LI+G ++ A+++ M S + V Y II GL
Sbjct: 499 IVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGL 558
Query: 123 IVEKKLSVASRVWGQMMEK 141
+ S A + M+E+
Sbjct: 559 CKVGQTSKARELLANMIEE 577
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGIS-PDRIFYTTIIGHLCKSGKIGL 60
G PD + +++ V+A + +A LL +M + + P + YT++I K G +
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +M+ GI +V++ +LI G CK+ + A+ L+++M+ GP P+ VT++++I
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 121 GLIVEKKLSVASRVWGQMMEKGFT 144
++ A + +M G T
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLT 406
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 64/133 (48%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
F L+ A+ ++ +D A +++QM ++ + P + + L + + A ++ M
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
V G+ D ++ L+ + + +EA+++ RG PD + Y+L ++ L
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284
Query: 129 SVASRVWGQMMEK 141
++A+ + +M EK
Sbjct: 285 AMANSLLREMKEK 297
>AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675811 FORWARD
Length = 463
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ PD VT I V + G D AK L+ ++T+ PD Y ++ HLCK + +
Sbjct: 153 NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 61 AHTIFCDMVEQ-GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+ +M + + PD++S LI+ C S + EAM L ++ + G PD YN I+
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIM 272
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+G K S A V+ +M E+G D+ LI
Sbjct: 273 KGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 2 GILPDVVTFTILVEAF--LREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG 59
G PD + +++ F L +GS + + +M + G+ PD+I Y T+I L K+G++
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVG--VYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A MV+ G PD + +L+NG C+ A+ L EEM++RG P++ TYN ++
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLL 377
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
GL + + ++ M G L+ L+ +
Sbjct: 378 HGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRS 414
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 71/134 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD +T+ L+ + G + A+ L M G PD YT+++ +C+ G+ A
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGA 354
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M +G P+ + N L++G CK+ + + M+LYE M+S G + Y ++R
Sbjct: 355 LSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRS 414
Query: 122 LIVEKKLSVASRVW 135
L+ K++ A V+
Sbjct: 415 LVKSGKVAEAYEVF 428
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 40 PDRIFYTTIIGHLCKS--GKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAM 97
P R + ++ H C++ I H + MV G+ PD ++ + + C++ RV EA
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 98 QLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMME 140
L +E+ + PD TYN +++ L K L V +M +
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD 222
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD T+T L+ R+G S A LL++M G +P+ Y T++ LCK+ +
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG 389
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYE 101
++ M G+ + L+ KS +V+EA ++++
Sbjct: 390 MELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
>AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675575 FORWARD
Length = 349
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ PD VT I V + G D AK L+ ++T+ PD Y ++ HLCK + +
Sbjct: 153 NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 61 AHTIFCDMVEQ-GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+ +M + + PD++S LI+ C S + EAM L ++ + G PD YN I+
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIM 272
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+G K S A V+ +M E+G D+ LI
Sbjct: 273 KGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ PD+V+FTIL++ + A L+ ++ G PD Y TI+ C K A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
++ M E+G+ PD I+ N LI G K+ RV EA + M G PD TY ++ G+
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 40 PDRIFYTTIIGHLCKS--GKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAM 97
P R + ++ H C++ I H + MV G+ PD ++ + + C++ RV EA
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 98 QLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMME 140
L +E+ + PD TYN +++ L K L V +M +
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD 222
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 2 GILPDVVTFTILVEAF--LREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG 59
G PD + +++ F L +GS + + +M + G+ PD+I Y T+I L K+G++
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVG--VYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCK 89
A MV+ G PD + +L+NG C+
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
>AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19896027-19897442 FORWARD
Length = 471
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 77/146 (52%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D ++ L+ + ++ G S+ +L++M++ G PD + Y +I C A+ +
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+MVE+G+ PDVIS N ++ F + + EA L+E+M RG PD ++Y ++ GL
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSE 151
+ A+ + +M+ KG+ R E
Sbjct: 377 LQFEEAAVILDEMLFKGYKPRRDRLE 402
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P V + L++A + G A KL D+ + I D Y+T+I L K+G+
Sbjct: 218 GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEV 277
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I +M E+G PD ++ N LINGFC A ++ +EM +G PD ++YN+I+
Sbjct: 278 SMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGV 337
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
KK A+ ++ M +G + D + I+
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDG 372
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 77/178 (43%), Gaps = 36/178 (20%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD T+ IL+ + G D A KL D+M K + P + + T+I LCK ++ A +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 65 FCDMVE-QGIPPDVISCNALINGFC----------------------------------- 88
DM++ G+ P V +LI C
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 89 KSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
K+ R +E + EEM +G PD VTYN++I G VE A+RV +M+EKG D
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G PD VT+ +L+ F E S+ A ++LD+M + G+ PD I Y I+G + K
Sbjct: 287 KGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEE 346
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F DM +G PD +S + +G C+ + EA + +EM +G P ++
Sbjct: 347 ATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQ 406
Query: 121 GLIVEKKLSVASRV 134
L KL + S+V
Sbjct: 407 KLCESGKLEILSKV 420
>AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: F mature embryo stage, C globular
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 25910 Blast hits to 6027
proteins in 187 species: Archae - 6; Bacteria - 20;
Metazoa - 625; Fungi - 635; Plants - 23410; Viruses - 0;
Other Eukaryotes - 1214 (source: NCBI BLink). |
chr2:7462820-7465740 FORWARD
Length = 874
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N LPD++T++ L+ + G AK L +M + PD + Y I H CK GKI
Sbjct: 518 NNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + DM ++G + + N+LI G ++ E L +EM+ +G P+ TYN I+
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ 637
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L +K+ A+ + +MM+K + + + LI A
Sbjct: 638 YLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N L + ++ I ++ +R G A+ +L QMT GI P Y ++ LCK G +
Sbjct: 320 NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSD 379
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A TI M G+ PD ++ L++G+C +V A L +EM P+ T N+++
Sbjct: 380 AKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLH 439
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L ++S A + +M EKG+ LD I++
Sbjct: 440 SLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P TF +L+ A D A++L D+M + G P+ + ++ CK+G
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M G+ P+ + N +++ FC+ R ++ ++ E+M+ G PD VT+N I
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 122 LIVEKKLSVASRVWGQM-MEKGFTLDRANS 150
L E K+ ASR++ M +++ L R NS
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNS 291
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 39/184 (21%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+LP+ V + +V +F REG +D ++K++++M + G+ PD + + + I LCK GK+ A
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Query: 62 HTIFCDMVEQ---GIP-PDVISCNALINGFCKSFRVSEAMQLYE---------------- 101
IF DM G+P P+ I+ N ++ GFCK + +A L+E
Sbjct: 272 SRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNI 331
Query: 102 -------------------EMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
+M +G P +YN+++ GL LS A + G M G
Sbjct: 332 WLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 143 FTLD 146
D
Sbjct: 392 VCPD 395
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P + ++ IL++ + G AK ++ M + G+ PD + Y ++ C GK+ A
Sbjct: 356 GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAA 415
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M+ P+ +CN L++ K R+SEA +L +M +G D VT N+I+ G
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Query: 122 LIVEKKLSVA 131
L +L A
Sbjct: 476 LCGSGELDKA 485
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 66/114 (57%)
Query: 31 DQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKS 90
D + + PD I Y+T++ LCK+G+ A +F +M+ + + PD ++ N I+ FCK
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 91 FRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFT 144
++S A ++ ++M+ +G + TYN +I GL ++ ++ + +M EKG +
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P V + +L+E+ ++E + L M GI+P + +I LC S + A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M E+G P+ + L+ G+CK+ + ++L M+S G P++V YN I+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
E + + ++ +M E+G D +++ NSR +A
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPD------IVTFNSRISA 261
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ PD VT+ L+ + G D AK LL +M + P+ ++ L K G+I
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISE 449
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGP------------ 108
A + M E+G D ++CN +++G C S + +A+++ + M+ G
Sbjct: 450 AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIG 509
Query: 109 -----------YPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
PD +TY+ ++ GL + + A ++ +MM + D I I
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 36/176 (20%)
Query: 5 PDVVTFTILVEAFLREGS--------SDIAKK---------------------------L 29
PD V + I + F ++G D+ KK L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 30 LDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCK 89
+D+M + GISP+ Y T I +LC+ K+ A + +M+++ I P+V S LI FCK
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Query: 90 SFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
A +++E S E Y+L+ L+ +L A+ + ++++GF L
Sbjct: 677 VPDFDMAQEVFETAVSICG-QKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P++ T+ ++ + A LLD+M + I+P+ + +I CK +A
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Query: 62 HTIFCDMVE-QGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+F V G + S + N + ++ +A +L E + RG Y ++
Sbjct: 684 QEVFETAVSICGQKEGLYS--LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVE 741
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRA 148
L + +L VAS + +M+++G+ D A
Sbjct: 742 SLCKKDELEVASGILHKMIDRGYGFDPA 769
>AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20901364-20902560 FORWARD
Length = 398
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 83/155 (53%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
I PD+V++ L++A + S A LLD++ G+ PD + + T++ G+ L
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I+ MVE+ + D+ + NA + G + E + L+ E+++ G PD ++N +IRG
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
I E K+ A + ++++ G+ D+A +L+ A
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPA 329
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 80/144 (55%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ P+ V + L+ A+ R G +A +L + M GISP+ YT++I + ++ A
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F +M +G+ P+V ALI+G+ K ++ + L EM S+ +P+++TY ++I G
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Query: 123 IVEKKLSVASRVWGQMMEKGFTLD 146
+ ++ ASR+ +M EKG D
Sbjct: 761 ARDGNVTEASRLLNEMREKGIVPD 784
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PDV FT + AF + G + A KL +M + G++P+ + + T+I L G+ A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
MVE+G+ P +I+ + L+ G ++ R+ +A + +EM +G P+ + YN +I
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
I L+ A + M+ KG +L + LI ++ +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQA 416
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 84/148 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+VVTF +++ G D A ++M + G+ P I Y+ ++ L ++ +IG A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + +M ++G PP+VI N LI+ F ++ +++A+++ + M S+G TYN +I+G
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRAN 149
+ A R+ +M+ GF +++ +
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGS 437
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G + D V++ L+ + D A LD+M K G+ PD Y+ +I L K+ A
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ D G+ PDV + + +I+G CK+ R E + ++EM S+ P+ V YN +IR
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANS 158
+LS+A + M KG + + A LI S
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 75/142 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD T++IL+ + A + D + G+ PD Y+ +I CK+ +
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F +M+ + + P+ + N LI +C+S R+S A++L E+M+ +G P+ TY +I+G
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
+ + ++ A ++ +M +G
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGL 711
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 35/181 (19%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMG------------------------------- 37
T+ L++ + + G +D A++LL +M +G
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 38 ----ISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRV 93
+SP TT+I LCK GK A ++ + +G D + NAL++G C++ ++
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 94 SEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEIL 153
EA ++ +E+ RG D V+YN +I G +KKL A +M+++G D IL
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 154 I 154
I
Sbjct: 582 I 582
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+V+ + L+++F+ GS + A ++ D M G+S Y T+I CK+G+ A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M+ G + S ++I C A++ EM R P +I G
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L K S A +W Q + KGF +D S L+
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G + D T L+ G D A ++ ++ G DR+ Y T+I C K+ A
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+MV++G+ PD + + LI G +V EA+Q +++ + G PD TY+++I G
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
++ + +MM K + LI A R
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
T L+ + G A +L Q G D ++ LC++GK+ A I +++
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
+G D +S N LI+G C ++ EA +EM RG PD TY+++I GL K+
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 130 VASRVWGQMMEKGFTLDRANSEILI 154
A + W G D ++I
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMI 617
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+ T+T L++ + AK L ++M G+ P+ YT +I K G++
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M + + P+ I+ +I G+ + V+EA +L EM+ +G PD +TY I G
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 122 LI 123
+
Sbjct: 795 YL 796
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 12 ILVEAFLREGSSD---IAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
+L+E + + D +A + + G+ P + ++ L ++ + F D+
Sbjct: 193 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DV 251
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
V +G+ PDV IN FCK +V EA++L+ +M+ G P+ VT+N +I GL + +
Sbjct: 252 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311
Query: 129 SVASRVWGQMMEKGFTLDRANSEILISANSR 159
A +M+E+G IL+ +R
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+V +T L++ + + G + LL +M + P++I YT +IG + G + A
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M E+GI PD I+ I G+ K V EA + DE Y II G
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAIIEG 819
>AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4792072-4793868 REVERSE
Length = 598
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD+V +++E LR A KL M G P+ YT +I CK +
Sbjct: 326 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 385
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F DMV+ G+ PD LI GF ++ +L +EMQ +G PD TYN +I+
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 121 GLIVEKKLSVASRVWGQMME 140
+ +K +R++ +M++
Sbjct: 446 LMANQKMPEHGTRIYNKMIQ 465
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G P+V ++TI++ F ++ S + A + D M G+ PD YT +I K+
Sbjct: 361 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 420
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ + +M E+G PPD + NALI ++Y +M P T+N+I++
Sbjct: 421 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 480
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
V + + VW +M++KG D + +LI
Sbjct: 481 SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLI 514
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFC 66
V T L+++ R A+ L D++ K +P+ + YT ++ C+ + A I+
Sbjct: 263 VETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 321
Query: 67 DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEK 126
DM++ G+ PD+++ N ++ G +S + S+A++L+ M+S+GP P+ +Y ++IR +
Sbjct: 322 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 381
Query: 127 KLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A + M++ G D A LI+
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+++T+T+L+ + R + A ++ + M G+ PD + + ++ L +S K A +
Sbjct: 295 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 354
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M +G P+V S +I FCK + A++ +++M G PD Y +I G
Sbjct: 355 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 414
Query: 125 EKKLSVASRVWGQMMEKGFTLD--RANSEILISANSR 159
+KKL + +M EKG D N+ I + AN +
Sbjct: 415 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK 451
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N I P + TF ++++++ + ++ + + D+M K GI PD YT +I L GK
Sbjct: 466 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 525
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY 109
A +M+++G+ +I N F F +++EE+ R +
Sbjct: 526 ACRYLEEMLDKGMKTPLID----YNKFAADFHRGGQPEIFEELAQRAKF 570
>AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23133514-23135313 REVERSE
Length = 599
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD+V +++E LR A KL M G P+ YT +I CK +
Sbjct: 327 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F DMV+ G+ PD LI GF ++ +L +EMQ +G PD TYN +I+
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 121 GLIVEKKLSVASRVWGQMME 140
+ +K +R++ +M++
Sbjct: 447 LMANQKMPEHGTRIYNKMIQ 466
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G P+V ++TI++ F ++ S + A + D M G+ PD YT +I K+
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ + +M E+G PPD + NALI ++Y +M P T+N+I++
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
V + + VW +M++KG D + +LI
Sbjct: 482 SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLI 515
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFC 66
V T L+++ R A+ L D++ K +P+ + YT ++ C+ + A I+
Sbjct: 264 VETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 67 DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEK 126
DM++ G+ PD+++ N ++ G +S + S+A++L+ M+S+GP P+ +Y ++IR +
Sbjct: 323 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 127 KLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A + M++ G D A LI+
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+++T+T+L+ + R + A ++ + M G+ PD + + ++ L +S K A +
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 355
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M +G P+V S +I FCK + A++ +++M G PD Y +I G
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 125 EKKLSVASRVWGQMMEKGFTLD--RANSEILISANSR 159
+KKL + +M EKG D N+ I + AN +
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK 452
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N I P + TF ++++++ + ++ + + D+M K GI PD YT +I L GK
Sbjct: 467 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 526
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY 109
A +M+++G+ +I N F F +++EE+ R +
Sbjct: 527 ACRYLEEMLDKGMKTPLID----YNKFAADFHRGGQPEIFEELAQRAKF 571
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA---- 61
D VT+ ++ G +D A + L +M KMGI PD + Y T+I CK G A
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 62 ----------HTI--------------FCDMVEQGIPPDVISCNALINGFCKSFRVSEAM 97
HTI + DMV G PDV++ +++IN CK +V E
Sbjct: 220 DEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG 279
Query: 98 QLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
L EM+ YP+ VTY ++ L A ++ QM+ +G +D
Sbjct: 280 LLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD 328
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI D+V +T+L++ + G A+K + + P+ + YT ++ LCK+G + A
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I M+E+ + P+V++ +++ING+ K + EA+ L +M+ + P+ TY +I G
Sbjct: 384 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443
Query: 122 LIVEKKLSVASRVWGQMM-----EKGFTLD 146
L K +A + +M E + LD
Sbjct: 444 LFKAGKEEMAIELSKEMRLIGVEENNYILD 473
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P++ T+ I ++ + +D K + + GI R Y T+I LCK G A
Sbjct: 639 IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 698
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DM +G PD ++ N+L++G+ V +A+ Y M G P+ TYN IIRGL
Sbjct: 699 MVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL 758
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ + +M +G D LIS ++
Sbjct: 759 SDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAK 795
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PDVVTF+ ++ + G LL +M +M + P+ + YTT++ L K+
Sbjct: 253 SGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRH 312
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ MV +GIP D++ L++G K+ + EA + ++ + P+ VTY ++
Sbjct: 313 ALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVD 372
Query: 121 GLIVEKKLSVASRVWGQMMEK 141
GL LS A + QM+EK
Sbjct: 373 GLCKAGDLSSAEFIITQMLEK 393
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+V T+ ++ G K L +M G+ PD Y +I K G + +
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGS 802
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
TI+C+M+ G+ P + N LI+ F ++ +A +L +EM RG P+ TY +I G
Sbjct: 803 MTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISG 862
Query: 122 L 122
L
Sbjct: 863 L 863
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 28/167 (16%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKM------------------------- 36
GILPD V++ L++ F + G+ AK L+D+++++
Sbjct: 191 GILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDM 250
Query: 37 ---GISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRV 93
G PD + +++II LCK GK+ + +M E + P+ ++ L++ K+
Sbjct: 251 VMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIY 310
Query: 94 SEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMME 140
A+ LY +M RG D V Y +++ GL L A + + ++E
Sbjct: 311 RHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE 357
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 35/188 (18%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD+ TF I++ + ++G S+ KL D+M GI P + ++G LC++GK+ A
Sbjct: 568 GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEA 627
Query: 62 HTIFCDMVEQGIPPDVIS-----------------------------------CNALING 86
I M+ I P++ + N LI
Sbjct: 628 IHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIAT 687
Query: 87 FCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
CK +A + +M++RG PD VT+N ++ G V + A + MME G + +
Sbjct: 688 LCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPN 747
Query: 147 RANSEILI 154
A +I
Sbjct: 748 VATYNTII 755
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ P+ VT+T LV++ + A L QM GI D + YT ++ L K+G + A
Sbjct: 290 VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAE 349
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
F ++E P+V++ AL++G CK+ +S A + +M + P+ VTY+ +I G
Sbjct: 350 KTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGY 409
Query: 123 I----VEKKLSVASRVWGQ-MMEKGFT 144
+ +E+ +S+ ++ Q ++ GFT
Sbjct: 410 VKKGMLEEAVSLLRKMEDQNVVPNGFT 436
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PDV +L+ +F + G A LL IS D + Y T+I LC+ G A
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEA 180
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM 103
+ +MV+ GI PD +S N LI+GFCK A L +E+
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +PD VTF L+ + A M + GISP+ Y TII L +G I
Sbjct: 708 GFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEV 767
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+M +G+ PD + NALI+G K + +M +Y EM + G P TYN++I
Sbjct: 768 DKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISE 827
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
K+ A + +M ++G + + + +IS
Sbjct: 828 FANVGKMLQARELLKEMGKRGVSPNTSTYCTMISG 862
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
++P+ T+ +++ + G ++A +L +M +G+ + ++ HL + G+I
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DMV +G+ D I+ +LI+ F K A+ EEMQ RG D V+YN++I G+
Sbjct: 490 GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGM 549
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
+ K+ A + M EKG D A I++++ + S
Sbjct: 550 LKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 2 GILPDVVTFTILVEAFLREG-SSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G++PD + L+ F G D + +M G+SPD +I CK G++
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 147
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ + V I D ++ N +I+G C+ EA Q EM G PD V+YN +I
Sbjct: 148 AISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 204
Query: 121 GL 122
G
Sbjct: 205 GF 206
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
++P+VVT++ ++ ++++G + A LL +M + P+ Y T+I L K+GK +A
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M G+ + +AL+N + R+ E L ++M S+G D++ Y +I
Sbjct: 455 ELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVF 514
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
A +M E+G D + +LIS
Sbjct: 515 FKGGDEEAALAWAEEMQERGMPWDVVSYNVLISG 548
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 77/151 (50%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
+P+VVT+T LV+ + G A+ ++ QM + + P+ + Y+++I K G + A +
Sbjct: 361 VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVS 420
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M +Q + P+ + +I+G K+ + A++L +EM+ G + + ++ L
Sbjct: 421 LLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLK 480
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
++ + M+ KG TLD+ N LI
Sbjct: 481 RIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT----IFCDMVEQGIPPDVISCN 81
A + L M G+ PD + ++I +G L H I+ M+ G+ PDV + N
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNG---LVHDQVSLIYSKMIACGVSPDVFALN 133
Query: 82 ALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEK 141
LI+ FCK R+S A+ L +++R D VTYN +I GL A + +M++
Sbjct: 134 VLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKM 190
Query: 142 GFTLDRANSEILI 154
G D + LI
Sbjct: 191 GILPDTVSYNTLI 203
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 5/156 (3%)
Query: 2 GILPDVVTFTILVEAFLREGS--SDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG 59
G+ DVV++ +L+ L+ G +D A K M + GI PD + ++ K G
Sbjct: 534 GMPWDVVSYNVLISGMLKFGKVGADWAYK---GMREKGIEPDIATFNIMMNSQRKQGDSE 590
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
++ M GI P ++SCN ++ C++ ++ EA+ + +M +P+ TY + +
Sbjct: 591 GILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 650
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
K+ + ++ G L R LI+
Sbjct: 651 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 686
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P V T+ IL+ + R+ D +L +M G P+ + Y T+I LCK K+ A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ DM ++G+ P V N LI+G C ++ +A + +EM +G + VTYN +I G
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + KLS A + ++ KG D LIS
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD + + L+ F G + A+K +++M G+SP Y +IG + +
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I +M + G P+V+S LIN CK ++ EA + +M+ RG P YN++I G
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANS 158
+ K+ A R +M++KG L+ LI S
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 76/137 (55%), Gaps = 1/137 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P V + +L++ +G + A + +M K GI + + Y T+I L +GK+ A
Sbjct: 524 GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ ++ +G+ PDV + N+LI+G+ + V + LYEEM+ G P TY+L+I
Sbjct: 584 EDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-S 642
Query: 122 LIVEKKLSVASRVWGQM 138
L ++ + + R++G+M
Sbjct: 643 LCTKEGIELTERLFGEM 659
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P+ V + +++ + R+G A+ ++ M K G+ PD + Y +I C+ G++ A
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
M +G+ P V + N LI G+ + + + + +EM+ G P+ V+Y +I
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 122 LIVEKKLSVASRVWGQMMEKGFT 144
L KL A V M ++G +
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVS 526
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +PD TF+IL + + ++ A + + G+ + + ++ LCK GKI A
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I + +G+ P+ + N +I+G+C+ + A E M+ +G PD + YN +IR
Sbjct: 374 EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRR 433
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
++ A + +M KG + ILI R
Sbjct: 434 FCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P V + +L++ + + A++L D+M + P I Y T+I CK+G +
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M I P +I+ N L+ G K+ V +A + +EM+ G PD T++++ G
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+K A V+ ++ G ++ IL++A
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 23 SDIAK--KLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISC 80
SD+ K +L ++M I P Y +I LCK ++ A +F +M+ + + P +I+
Sbjct: 193 SDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 252
Query: 81 NALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMME 140
N LI+G+CK+ ++ ++ E M++ P +T+N +++GL + A V +M +
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 141 KGFTLDRANSEILI---SANSRDAAS 163
GF D IL S+N + A+
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAA 338
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQ-MTKMGISPDRIFYTTIIGHLCKSGKIG 59
NG +P+VV++ L+ + GS + +++ + M G+SP Y +I C GKI
Sbjct: 488 NGTMPNVVSYGTLINCLCK-GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A +M+++GI ++++ N LI+G + ++SEA L E+ +G PD TYN +I
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
G + ++ +M G +LIS +++
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ + T +IL+ A +EG + A+++L + G+ P+ + Y T+I C+ G +
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A M +QG+ PD ++ N LI FC+ + A + +M+ +G P TYN++I
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 121 G 121
G
Sbjct: 468 G 468
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P ++TF L++ + G + A+ +L +M +G PD ++ + + K A
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
++ V+ G+ + +C+ L+N CK ++ +A ++ ++G P+EV YN +I G
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399
Query: 123 IVEKKLSVASRVWGQMMEK 141
+ L V +R+ + MEK
Sbjct: 400 CRKGDL-VGARMKIEAMEK 417
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI P + T+ +L+ +EG ++ ++L +M+ + PD + Y ++ G +
Sbjct: 628 SGIKPTLKTYHLLISLCTKEGI-ELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEK 683
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M+E+ I D + N+LI G K ++ E L +EM +R P+ TYN+I++
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743
Query: 121 GLIVEKKLSVASRVW-GQMMEKGFTLD 146
G E K +++ VW +M EKGF LD
Sbjct: 744 GH-CEVKDYMSAYVWYREMQEKGFLLD 769
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 72/141 (51%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+LP ++T+ L++ + + G+ + + K+ ++M I P I + T++ L K+G + A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M + G PD + + L +G+ + + A+ +YE G + T ++++ L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 123 IVEKKLSVASRVWGQMMEKGF 143
E K+ A + G+ M KG
Sbjct: 365 CKEGKIEKAEEILGREMAKGL 385
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P + T+L++ ++ + + + + P + Y I K +G
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M I P V N LI+G CK R+++A QL++EM +R P +TYN +I G
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 122 LIV----EKKLSVASRVWGQMME 140
EK V R+ +E
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIE 281
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD++ + ++ + G + A L QM + I D+ Y ++I K GK+ ++
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+M + + P+ + N ++ G C+ A Y EMQ +G D N ++ GL
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKE 782
Query: 125 EKKLSVASRVWGQM 138
E + A V +M
Sbjct: 783 EWRSKEAEIVISEM 796
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 53/116 (45%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
A L + GI P T ++ HL K+ + + +F +++E P I
Sbjct: 128 AADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQ 187
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEK 141
K V + ++L+ M+ YP YN++I GL K+++ A +++ +M+ +
Sbjct: 188 AAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 84/161 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ +VVT+T L++ + ++G + A+ + + + + + D+ Y ++ C++G+I A
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M+E G+ + CN+LING+CKS ++ EA Q++ M PD TYN ++ G
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDG 410
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
+ A ++ QM +K IL+ SR A
Sbjct: 411 YCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLL-DQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
++P+ + + + + + G + A+KL D ++ PD YT +I +G I A
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
T+ +M +GI P++++ NALI G CK V A +L ++ +G P+ +TYN +I G
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
L+ ++ A R+ +M+EKG
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKGL 856
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD T+ LV+ + R G D A KL DQM + + P + Y ++ + G ++
Sbjct: 399 PDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSL 458
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ M+++G+ D ISC+ L+ K +EAM+L+E + +RG D +T N++I GL
Sbjct: 459 WKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCK 518
Query: 125 EKKLSVASRV 134
+K++ A +
Sbjct: 519 MEKVNEAKEI 528
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 3 ILPDVVTFTILVEAF--LRE----------GSSDIAKKLLDQMTKMGISPDRIFYTTIIG 50
+L +V F +L+ + L+E + IA+ + + K + P+ I Y I
Sbjct: 668 LLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIA 727
Query: 51 HLCKSGKIGLAHTIFCDMVEQG-IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY 109
LCK+GK+ A +F D++ PD + LI+G + +++A L +EM +G
Sbjct: 728 GLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGII 787
Query: 110 PDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFT 144
P+ VTYN +I+GL + A R+ ++ +KG T
Sbjct: 788 PNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 72/155 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ + L+ + + G A+++ +M + PD Y T++ C++G + A
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M ++ + P V++ N L+ G+ + + + L++ M RG DE++ + ++
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + A ++W ++ +G D ++IS
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISG 515
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQM-TKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
PDV T +I+V A+ R G+ D A + + +G+ + + Y ++I G +
Sbjct: 223 PDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTR 282
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ M E+G+ +V++ +LI G+CK + EA ++E ++ + D+ Y +++ G
Sbjct: 283 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 342
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEI 152
++ A RV M+E G R N+ I
Sbjct: 343 RTGQIRDAVRVHDNMIEIGV---RTNTTI 368
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
++P V+T+ IL++ + R G+ L M K G++ D I +T++ L K G A
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
++ +++ +G+ D I+ N +I+G CK +V+EA ++ + + P TY + G
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551
Query: 123 IVEKKLSVASRVWGQMMEKG 142
L A V M KG
Sbjct: 552 YKVGNLKEAFAVKEYMERKG 571
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI+P++VT+ L++ + G+ D A++LL ++ + GI+P+ I Y T+I L KSG + A
Sbjct: 785 GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEA 844
Query: 62 HTIFCDMVEQGI 73
+ M+E+G+
Sbjct: 845 MRLKEKMIEKGL 856
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +P +++ L+ +R+G + +A + DQM +SPD + ++ C+SG + A
Sbjct: 185 GRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKA 244
Query: 62 HTIFCDMVEQ--GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+F E G+ +V++ N+LING+ V ++ M RG + VTY +I
Sbjct: 245 -MVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLI 303
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+G + + A V+ + EK D+ +L+ R
Sbjct: 304 KGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D ++ + L+EA + G + A KL + + G+ D I +I LCK K+ A
Sbjct: 466 GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA 525
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I ++ P V + AL +G+ K + EA + E M+ +G +P YN +I G
Sbjct: 526 KEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG 585
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ L+ + + ++ +G T A LI+
Sbjct: 586 AFKYRHLNKVADLVIELRARGLTPTVATYGALITG 620
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+L D +T +++ + + AK++LD + P Y + K G + A
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M +GI P + N LI+G K +++ L E+++RG P TY +I G
Sbjct: 561 FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITG 620
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
+ A +M+EKG TL+
Sbjct: 621 WCNIGMIDKAYATCFEMIEKGITLN 645
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
F ++++ + +G A + D M G P + +++ +L + G+ +A ++ M+
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR-GPYPDEVTYNLIIRGLIVEKKL 128
+ PDV +C+ ++N +C+S V +AM +E +S G + VTYN +I G + +
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 129 SVASRVWGQMMEKGFT 144
+RV M E+G +
Sbjct: 278 EGMTRVLRLMSERGVS 293
>AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR)
DOMAIN PROTEIN 40) | chr3:5768401-5770380 REVERSE
Length = 659
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PDV+TF++++ R A +M + GI P+ I Y +I C +G
Sbjct: 489 HGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDR 548
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ +F M E G+ PD+ + NA I FCK +V +A +L + M G PD TY+ +I+
Sbjct: 549 SVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIK 608
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
L + S A ++ + G D
Sbjct: 609 ALSESGRESEAREMFSSIERHGCVPD 634
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P++VTF + + G +L+++ G PD I ++ II LC++ +I A
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDA 514
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F +M+E GI P+ I+ N LI C + +++L+ +M+ G PD YN I+
Sbjct: 515 FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQS 574
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+K+ A + M+ G D LI A
Sbjct: 575 FCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKA 609
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 73/146 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+L V ++ +++ + + A L +M GISP+ + + T + G +
Sbjct: 419 DGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKK 478
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
H + ++ G PDVI+ + +IN C++ + +A ++EM G P+E+TYN++IR
Sbjct: 479 VHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIR 538
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
+ +++ +M E G + D
Sbjct: 539 SCCSTGDTDRSVKLFAKMKENGLSPD 564
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+ +T+ IL+ + G +D + KL +M + G+SPD Y I CK K+ A
Sbjct: 525 GIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKA 584
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
+ M+ G+ PD + + LI +S R SEA +++ ++ G PD T L+
Sbjct: 585 EELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P + +++A ++ S D+A QM G PDR Y +I +CK G + A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M ++G P+V + LI+GF + RV EA++ E M+ R P+E T + G
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
+ A V MEK L R + ++ S ++ +
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMA 336
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%)
Query: 12 ILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQ 71
+L+ ++ R G + + Q++ +G+ P Y +I L KS + LA+ F M
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 72 GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVA 131
G PD + N LI+G CK V EA++L ++M+ G P+ TY ++I G ++ ++ A
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P + +LV+A L + L QM G+ Y +I LCK+ +I A
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+M ++GI P++++ N ++G+ V + + E++ G PD +T++LII
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L K++ A + +M+E G + ILI +
Sbjct: 505 LCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRS 539
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +PD TF + L+ ++ D G+ P Y ++ L + +
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
M G+ V S NA+I+ CK+ R+ A EMQ RG P+ VT+N + G
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
V + V +++ GF D ++I+ R
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCR 507
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 11 TILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA---HTIFCD 67
++L A R+G ++ +LL ++ G +IG G++GLA + +F
Sbjct: 114 SVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSW---GRLGLAKYCNDVFAQ 170
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
+ G+ P NA+I+ KS + A +++M+S G PD TYN++I G+ +
Sbjct: 171 ISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGV 230
Query: 128 LSVASRVWGQMMEKG 142
+ A R+ QM ++G
Sbjct: 231 VDEAIRLVKQMEQEG 245
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 77/140 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+V +T+L++ + + GS + A +LL +M G PD + Y+ ++ LCK+G++ A
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F G+ + + ++LI+G K+ RV EA +L+EEM +G D YN +I
Sbjct: 417 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476
Query: 122 LIVEKKLSVASRVWGQMMEK 141
+K+ A ++ +M E+
Sbjct: 477 FTKHRKVDEAIALFKRMEEE 496
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
F++++ +EG + + + M + G P+ YT +I KSG + A + M
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
+++G PDV++ + ++NG CK+ RV EA+ + + G + + Y+ +I GL ++
Sbjct: 389 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRV 448
Query: 129 SVASRVWGQMMEKGFTLDRANSEILISANSR 159
A R++ +M EKG T D LI A ++
Sbjct: 449 DEAERLFEEMSEKGCTRDSYCYNALIDAFTK 479
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 35/155 (22%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTT--------------- 47
I PD+VT+ +++ + + G + A + L M G D+I Y T
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 48 --------------------IIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGF 87
+IG LCK GK+ +T+F +M+ +G P+V LI+G+
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 88 CKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
KS V +A++L M G PD VTY++++ GL
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGL 407
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NGI P + T+ L+ + D A+++ + M I PD + Y T+I CK+G+
Sbjct: 216 NGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQK 275
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A DM +G D I+ +I + LY+EM +G ++L+I
Sbjct: 276 AMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIG 335
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
GL E KL+ V+ M+ KG + A +LI ++ +
Sbjct: 336 GLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 36/188 (19%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVVT++++V + G + A G++ + +FY+++I L K+G++ A
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRV---------------------------- 93
+F +M E+G D NALI+ F K +V
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 94 --------SEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
EA++L++ M +G P + + GL + K++ A ++ ++ G L
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 571
Query: 146 DRANSEIL 153
D A +++
Sbjct: 572 DAACEDMI 579
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFC 66
V T+TIL+ +E ++ A KL D M GI+P + + LC SGK+ A I
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD 562
Query: 67 DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG 107
++ G+ D +C +IN CK+ R+ EA +L + + RG
Sbjct: 563 ELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERG 602
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 66/130 (50%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
L+++F + G + + +M + GI P Y ++ L + + A +F M
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVAS 132
I PD+++ N +I G+CK+ + +AM+ +M++RG D++TY +I+ +
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 133 RVWGQMMEKG 142
++ +M EKG
Sbjct: 313 ALYQEMDEKG 322
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 56 GKIGLAHT---IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDE 112
GK+G+ ++ M E GI P + + N L+NG + V A +++E M+S PD
Sbjct: 198 GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDI 257
Query: 113 VTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
VTYN +I+G + A M +G D+ +I A D+
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
>AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8017771-8019459 REVERSE
Length = 562
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+ I PD TF IL+ F + D A+ ++D M +PD + YT+ + CK G
Sbjct: 267 DTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRR 326
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ + +M E G P+V++ +++ KS +V+EA+ +YE+M+ G PD Y+ +I
Sbjct: 327 VNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIH 386
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA---NSRD 160
L + A+ ++ M +G D +ISA +SRD
Sbjct: 387 ILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRD 429
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 76/134 (56%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVVT+T VEA+ +EG ++L++M + G +P+ + YT ++ L KS ++ A +
Sbjct: 306 PDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGV 365
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ M E G PD ++LI+ K+ R +A +++E+M ++G D + YN +I +
Sbjct: 366 YEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALH 425
Query: 125 EKKLSVASRVWGQM 138
+ +A R+ +M
Sbjct: 426 HSRDEMALRLLKRM 439
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P+VVT+TI++ + + A + ++M + G PD FY+++I L K+G+
Sbjct: 337 NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKD 396
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQ 104
A IF DM QG+ DV+ N +I+ R A++L + M+
Sbjct: 397 AAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKM---GISPDRIFYTTIIGHLCKSGKI 58
G+ DV+ + ++ A L ++A +LL +M SP+ Y ++ C K+
Sbjct: 408 GVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKM 467
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
L + MV+ + DV + LI G C S +V EA +EE +G P + T ++
Sbjct: 468 KLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKML 527
Query: 119 IRGL----IVEKKLSVASRVWGQMM 139
+ L + E KL + S V + M
Sbjct: 528 VDELEKKNMAEAKLKIQSLVQSKTM 552
>AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4227975-4229630 REVERSE
Length = 551
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 79/153 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD+VT+ +++A R+GS D + +++ K G PD I + T++ +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I+ M + + P++ S N+ + G ++ + ++A+ L + M++ G PD TYN +I
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
V+ L + + +M EKG T D +LI
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLI 340
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQM-TKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
V +F L+ A++ D A K ++ K+GI+PD + Y T+I LC+ G + +IF
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
++ + G PD+IS N L+ F + E ++++ M+S+ P+ +YN +RGL
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISA 156
KK + A + M +G + D LI+A
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG PD+++F L+E F R ++ D M +SP+ Y + + L ++ K
Sbjct: 222 NGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTD 281
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A + M +GI PDV + NALI + + E M+ Y EM+ +G PD VTY ++I
Sbjct: 282 ALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLI 340
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 55 SGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR-GPYPDEV 113
SG AH +F +M E V S NAL++ + S ++ EAM+ ++E+ + G PD V
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 114 TYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANS 158
TYN +I+ L + + ++ ++ + GF D LIS N+
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPD------LISFNT 233
>AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15510901-15512691 FORWARD
Length = 596
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+ + + VT+T L++ + R D A +L + M G SP + Y +I+ LC+ G+I
Sbjct: 301 DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIRE 360
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ + +M + I PD I+CN LIN +CK + A+++ ++M G D +Y +I
Sbjct: 361 ANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
G +L A M+EKGF+ A L+
Sbjct: 421 GFCKVLELENAKEELFSMIEKGFSPGYATYSWLV 454
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD+ T+ L+ + ++ A + D+M + G++P+ + Y + I + G++ A
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F + ++ + + ++ LI+G+C+ + EA++L E M+SRG P VTYN I+R
Sbjct: 293 TRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRK 351
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + ++ A+R+ +M K D LI+A
Sbjct: 352 LCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ P++VT+ + F REG A +L ++ K ++ + + YTT+I C+ I
Sbjct: 267 SGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDE 325
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + M +G P V++ N+++ C+ R+ EA +L EM + PD +T N +I
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ + A +V +M+E G LD + + LI
Sbjct: 386 AYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 74/137 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P + T+L+ + +++ +D K+ +M K+G+ + Y ++ KSG A
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M E+G+ PD+ + N LI+ +CK EA+ + + M+ G P+ VTYN I G
Sbjct: 223 EKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHG 282
Query: 122 LIVEKKLSVASRVWGQM 138
E ++ A+R++ ++
Sbjct: 283 FSREGRMREATRLFREI 299
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P VVT+ ++ +G A +LL +M+ I PD I T+I CK + A
Sbjct: 337 GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSA 396
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M+E G+ D+ S ALI+GFCK + A + M +G P TY+ ++ G
Sbjct: 397 VKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDG 456
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRA 148
+ K +++ + ++G D A
Sbjct: 457 FYNQNKQDEITKLLEEFEKRGLCADVA 483
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P T++ LV+ F + D KLL++ K G+ D Y +I +CK ++ A
Sbjct: 442 GFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYA 501
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR 106
+F M ++G+ D + + + ++ +V+EA L++ M +R
Sbjct: 502 KVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNR 546
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
F+ L+ + + G + + + +Q+ G+ P T ++ L K IF MV
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+ G+ ++ N L++ KS +A +L EM+ +G +PD TYN +I
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLI 245
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG PDV+ + +L++A + + A L ++M G+ P Y ++I CK G+I
Sbjct: 608 NGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR 667
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ M E PDVI+ +LI+G C S R SEA+ + EM+ + YP+ +T+ +I+
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQ 727
Query: 121 GL 122
GL
Sbjct: 728 GL 729
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G L +V T ++ ++ D +L + G PD I Y +I LCK+ + A
Sbjct: 574 GFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEA 633
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +MV +G+ P V + N++I+G+CK + + M PD +TY +I G
Sbjct: 634 DILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHG 693
Query: 122 LIVEKKLSVASRVWGQMMEK 141
L + S A W +M K
Sbjct: 694 LCASGRPSEAIFRWNEMKGK 713
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P V T+ +++ + +EG D + +M + +PD I YT++I LC SG+ A
Sbjct: 644 GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA 703
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M + P+ I+ ALI G CK EA+ + EM+ + PD Y ++
Sbjct: 704 IFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSS 763
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ + ++ ++ +M+ KG
Sbjct: 764 FLSSENINAGFGIFREMVHKG 784
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 58/127 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P + T LV+ G + A K LD + G + T I L K+ +
Sbjct: 539 GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRG 598
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F D+ G PDVI+ + LI CK+ R EA L+ EM S+G P TYN +I G
Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDG 658
Query: 122 LIVEKKL 128
E ++
Sbjct: 659 WCKEGEI 665
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G D T T +++ + G S+ A + +++ G + I T ++ CK G++ A
Sbjct: 209 GFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHI-STILVVSFCKWGQVDKA 267
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + E+ I + + LI+GF K R+ +A QL+E+M+ G D Y+++I G
Sbjct: 268 FELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGG 327
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRA 148
L K L +A ++ ++ G DR
Sbjct: 328 LCKHKDLEMALSLYLEIKRSGIPPDRG 354
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
L+ + +G S+I K L D I PD + +I L K+ K+ +A T+ D+V+ G
Sbjct: 412 LMGNYESDGVSEIVKLLKDH--NKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNG 469
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEK 126
+ P + N +I G CK R E+++L EM+ G P + T N I G + E+
Sbjct: 470 LIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIY-GCLAER 522
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 35/178 (19%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRI----------------- 43
NG++P + + ++E +EG S+ + KLL +M G+ P +
Sbjct: 468 NGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVG 527
Query: 44 ---------FY---------TTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
FY T ++ LC++G+ A D+ +G +++ A I+
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
G K+ V ++L+ ++ + G PD + Y+++I+ L + A ++ +M+ KG
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%)
Query: 11 TILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVE 70
TILV +F + G D A +L++ + + I + Y +I K +I A +F M
Sbjct: 252 TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRR 311
Query: 71 QGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSV 130
G+ D+ + LI G CK + A+ LY E++ G PD ++ E +LS
Sbjct: 312 MGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSR 371
Query: 131 ASRV 134
+ V
Sbjct: 372 ITEV 375
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 30/185 (16%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV+T+T L+ G A ++M P+RI + +I LCK G G A
Sbjct: 682 PDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVY 741
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT---------- 114
F +M E+ + PD +L++ F S ++ ++ EM +G +P V
Sbjct: 742 FREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVT 801
Query: 115 --------------------YNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+N +IRG + + V+ QM+ G D L+
Sbjct: 802 SDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 861
Query: 155 SANSR 159
++SR
Sbjct: 862 KSSSR 866
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
ILPD + +I++ ++ D+A LL + + G+ P + Y II +CK G+ +
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG--PYPDEVTY 115
+ +M + G+ P + N + + A+ L ++M+ G P+ T+
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTF 549
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+LPD +T+ L+++ R + + L + K G+ D T+I A
Sbjct: 849 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 908
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M + ++++ N++++ + KS V A +++EM R D VT++ +I G
Sbjct: 909 RKLFDEMPHK----NLVTWNSILDAYAKSGDVVSARLVFDEMSER----DVVTWSSMIDG 960
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
+ + + A ++ QMM G + +AN ++S
Sbjct: 961 YVKRGEYNKALEIFDQMMRMGSS--KANEVTMVS 992
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 75/136 (55%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
V +T+L++A +EG ++L ++++ G+ PD+ YT+ I LCK G + A +
Sbjct: 404 VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTR 463
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
MV++G+ D+++ LI G + EA Q+++EM + G PD ++L+IR E
Sbjct: 464 MVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGN 523
Query: 128 LSVASRVWGQMMEKGF 143
++ AS + M +G
Sbjct: 524 MAAASDLLLDMQRRGL 539
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+VVT++ ++ F + G +A K M + +SP+ + +T +I CK+G + +A ++
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ +M + +V++ ALI+GFCK + A ++Y M P+ + Y II G
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
A + +M+ +G LD ++IS
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 75/141 (53%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+VVT+T L++ F ++G A+++ +M + + P+ + YTTII + G A
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M+ QG+ D+ + +I+G C + ++ EA ++ E+M+ PD V + ++
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 126 KKLSVASRVWGQMMEKGFTLD 146
++ A ++ +++E+GF D
Sbjct: 352 GRMKAAVNMYHKLIERGFEPD 372
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+ + P+VVTFT L++ + + G ++A L +M ++ +S + + YT +I CK G++
Sbjct: 192 DALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQR 251
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ MVE + P+ + +I+GF + AM+ +M ++G D Y +II
Sbjct: 252 AEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS 311
Query: 121 GLIVEKKLSVASRVWGQM 138
GL KL A+ + M
Sbjct: 312 GLCGNGKLKEATEIVEDM 329
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+ + +T +++ F + G SD A K L +M G+ D Y II LC +GK+ A I
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
DM + + PD++ ++N + KS R+ A+ +Y ++ RG PD V + +I G+
Sbjct: 326 VEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 125 EKKLSVA 131
+L A
Sbjct: 386 NGQLHEA 392
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 13/142 (9%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQM-TKMGI-----SPDRIFYTTIIGHLCKSGKI 58
PD+V+F L F + K+LD++ MG+ SP+ + Y+T I CKSG++
Sbjct: 127 PDIVSFNSLFNGFSK-------MKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
LA F M + P+V++ LI+G+CK+ + A+ LY+EM+ + VTY +
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 119 IRGLIVEKKLSVASRVWGQMME 140
I G + ++ A ++ +M+E
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVE 261
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 30/189 (15%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPD--------------------- 41
++PD+V FT ++ A+ + G A + ++ + G PD
Sbjct: 334 LVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI 393
Query: 42 ---------RIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFR 92
+ YT +I LCK G +F + E G+ PD + I G CK
Sbjct: 394 VYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN 453
Query: 93 VSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEI 152
+ +A +L M G D + Y +I GL + + A +V+ +M+ G + D A ++
Sbjct: 454 LVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDL 513
Query: 153 LISANSRDA 161
LI A ++
Sbjct: 514 LIRAYEKEG 522
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 81/175 (46%), Gaps = 30/175 (17%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D+ + +++ G A ++++ M K + PD + +TT++ KSG++ A
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAM------------------------ 97
++ ++E+G PDV++ + +I+G K+ ++ EA+
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEG 417
Query: 98 ------QLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
+L+ ++ G PD+ Y I GL + L A ++ +M+++G LD
Sbjct: 418 DFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LPD T + + ++ K L + G +P R + +++ +CK G++ A
Sbjct: 18 LPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAED 77
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY---PDEVTYNLIIR 120
I M G PDVIS N+LI+G C++ + A + E +++ + PD V++N +
Sbjct: 78 IVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFN 137
Query: 121 GLIVEKKLSVASRVWGQMME 140
G K L G M++
Sbjct: 138 GFSKMKMLDEVFVYMGVMLK 157
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++PD +T + ++G+ A KL +M + G+ D + YTT+I L G + A
Sbjct: 433 GLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEA 492
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG 107
+F +M+ GI PD + LI + K ++ A L +MQ RG
Sbjct: 493 RQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 72/190 (37%), Gaps = 37/190 (19%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P +F +V + G A+ ++ M + G PD I Y ++I C++G I A
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 62 HTIFCDM-VEQGI--PPDVISCNALING-------------------------------- 86
+ + G PD++S N+L NG
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWI 170
Query: 87 --FCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFT 144
FCKS + A++ + M+ P+ VT+ +I G L VA ++ +M +
Sbjct: 171 DTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS 230
Query: 145 LDRANSEILI 154
L+ LI
Sbjct: 231 LNVVTYTALI 240
>AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4731056-4733707 REVERSE
Length = 883
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I+PDVVT+T+L++ + + L +M + PD +YT +I CK G +G A
Sbjct: 729 IVPDVVTYTVLLK-------NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAK 781
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
IF M+E G+ PD ALI CK + EA +++ M G PD V Y +I G
Sbjct: 782 RIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGC 841
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRAN 149
+ A ++ +M+EKG +A+
Sbjct: 842 CRNGFVLKAVKLVKEMLEKGIKPTKAS 868
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D V + + +A + G + A +L +MT GI+PD I YTT+IG C GK A +
Sbjct: 395 DRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM 454
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+M G PD++ N L G + EA + + M++RG P VT+N++I GLI
Sbjct: 455 IEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDA 514
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
+L A + + K D + + +A D A
Sbjct: 515 GELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHA 551
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LP V FT+ + A+ LLD+M K+G+ P++ Y +IG C+ + A
Sbjct: 562 LPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKARE 621
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
F +V + I PD+ + +IN +C+ +A L+E+M+ R PD VTY++++
Sbjct: 622 FFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL 677
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+ V + +++ + + G+ A L + + IS DR+ Y L K GK+ A +F
Sbjct: 360 NCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELF 419
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+M +GI PDVI+ LI G C + S+A L EM G PD V YN++ GL
Sbjct: 420 REMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGL 476
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVVT+++L+ +SD + +M + PD ++YT +I C + + +
Sbjct: 668 PDVVTYSVLL-------NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYAL 720
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F DM + I PDV++ L+ L EM++ PD Y ++I
Sbjct: 721 FKDMKRREIVPDVVTYTVLLKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCK 773
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
L A R++ QM+E G D A LI+
Sbjct: 774 IGDLGEAKRIFDQMIESGVDPDAAPYTALIA 804
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI PDV ++ ++E + + A + ++M K + + ++I+ C+ G
Sbjct: 320 HGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSE 379
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ +F + E I D + N + K +V EA++L+ EM +G PD + Y +I
Sbjct: 380 AYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIG 439
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
G ++ K S A + +M G T D
Sbjct: 440 GCCLQGKCSDAFDLMIEMDGTGKTPD 465
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD +T L+ + G AK + D+M + G+ PD + YT +I C++G +
Sbjct: 790 SGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLK 849
Query: 61 AHTIFCDMVEQGIPPDVISCNAL 83
A + +M+E+GI P S +A+
Sbjct: 850 AVKLVKEMLEKGIKPTKASLSAV 872
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
GI PDV+ +T L+ +G A L+ +M G +PD + Y + G L +G
Sbjct: 425 KGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQE 484
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR 106
A M +G+ P ++ N +I G + + +A YE ++ +
Sbjct: 485 AFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDR---IFYTTIIGHLCKSGKI 58
G+ D T+ ++V+A R + +KLL +++ IS R +FY I LC +
Sbjct: 212 GLDADAHTYVLVVQALWRNDDKEELEKLL---SRLLISETRNPCVFYLNFIEGLCLNQMT 268
Query: 59 GLAHTIFCDMVEQGIPPDV----ISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
+A+ + + + I D I+ ++ G C R+ +A + +M+ G PD
Sbjct: 269 DIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYV 328
Query: 115 YNLIIRGLIVEKKLSVASRVWGQMMEK 141
Y+ II G + A V+ +M++K
Sbjct: 329 YSAIIEGHRKNMNIPKAVDVFNKMLKK 355
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 4/153 (2%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDR----IFYTTIIGHLCKSGKIGLAHT 63
V + +E +DIA LL + I D+ I Y ++ LC +I A +
Sbjct: 253 VFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAES 312
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ DM + GI PDV +A+I G K+ + +A+ ++ +M + + V + I++
Sbjct: 313 VVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYC 372
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
S A ++ + E +LDR + A
Sbjct: 373 QMGNFSEAYDLFKEFRETNISLDRVCYNVAFDA 405
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
+ + +V E + A+ ++ M K GI PD Y+ II K+ I A +F
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
M+++ + + ++++ +C+ SEA L++E + D V YN+ L K
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 128 LSVASRVWGQMMEKGFTLDRANSEILI 154
+ A ++ +M KG D N LI
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLI 438
>AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4857361-4858959 FORWARD
Length = 532
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ DVV+++ ++ + + GS + KL D+M K I PDR Y ++ L K+ + A
Sbjct: 257 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 316
Query: 62 HTIFCDMVEQ-GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ M E+ GI P+V++ N+LI CK+ + EA Q+++EM +G +P TY+ +R
Sbjct: 317 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 376
Query: 121 GL 122
L
Sbjct: 377 IL 378
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 6 DVVTFTILVEAFLRE-GSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
D +F I++ + GS A+++ +M +G+ D + Y+++I K G + +
Sbjct: 225 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 284
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM-QSRGPYPDEVTYNLIIRGLI 123
F M ++ I PD NA+++ K+ VSEA L + M + +G P+ VTYN +I+ L
Sbjct: 285 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 344
Query: 124 VEKKLSVASRVWGQMMEKGF 143
+K A +V+ +M+EKG
Sbjct: 345 KARKTEEAKQVFDEMLEKGL 364
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+VVT+ L++ + ++ AK++ D+M + G+ P Y + + ++G+
Sbjct: 328 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM-RILRTGE--EV 384
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M + G P V + LI C+ + L++EM+ + PD +Y ++I G
Sbjct: 385 FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHG 444
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L + K+ A + +M +KG
Sbjct: 445 LFLNGKIEEAYGYYKEMKDKG 465
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P + T+ + LR G +LL +M KMG P Y +I LC+
Sbjct: 363 GLFPTIRTYHAFMR-ILRTGEEVF--ELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNV 419
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
++ +M E+ + PD+ S +I+G + ++ EA Y+EM+ +G P+E ++I
Sbjct: 420 LLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMI 476
>AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein
(TAIR:AT5G65820.1); Has 25923 Blast hits to 13097
proteins in 1477 species: Archae - 105; Bacteria - 3757;
Metazoa - 995; Fungi - 405; Plants - 17052; Viruses -
21; Other Eukaryotes - 3588 (source: NCBI BLink). |
chr3:18445730-18447646 REVERSE
Length = 638
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 2 GILPDVVTFTILVEAFLR-EGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G P+V +T+L++A R E D A ++ +M + G D + YT +I CK G I
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+++ DM ++G+ P ++ ++ K + E ++L E+M+ RG +PD + YN++IR
Sbjct: 361 GYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIR 420
Query: 121 GLIVEKKLSVASRVWGQMMEKGFT 144
++ A R+W +M G +
Sbjct: 421 LACKLGEVKEAVRLWNEMEANGLS 444
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 12/142 (8%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P++ FT L+ + REG AK++L QM + G+ PD + +T ++ +GK+ A+ +
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 293
Query: 65 FCDMVEQGIPPDVISCNALINGFCKS-FRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
DM ++G P+V LI C++ R+ EAM+++ EM+ G D VTY +I G
Sbjct: 294 MNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 353
Query: 124 VEKKLSVASRVWGQMMEKGFTL 145
WG M++KG+++
Sbjct: 354 ----------KWG-MIDKGYSV 364
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKK---LLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
P+++ + V R S+++ KK +LD+M K G+ PD + ++ LCK+G + A
Sbjct: 162 PELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEA 221
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F DM E+ PP++ +L+ G+C+ ++ EA ++ +M+ G PD V + ++ G
Sbjct: 222 SKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSG 280
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
K++ A + M ++GF + +LI A R
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR 318
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P VT+ ++ A ++ + +L+++M + G PD + Y +I CK G++ A
Sbjct: 372 GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEA 431
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY--PDEVTYNLII 119
++ +M G+ P V + +INGF + EA ++EM SRG + P T ++
Sbjct: 432 VRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLL 491
Query: 120 RGLIVEKKLSVASRVW 135
L+ + KL +A VW
Sbjct: 492 NNLVRDDKLEMAKDVW 507
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G D+VT+T L+ F + G D +LD M K G+ P ++ Y I+ K +
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC 396
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M +G PD++ N +I CK V EA++L+ EM++ G P T+ ++I G
Sbjct: 397 LELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMING 456
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ L A + +M+ +G
Sbjct: 457 FTSQGFLIEACNHFKEMVSRG 477
>AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2733788-2735467 REVERSE
Length = 559
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
LPD+VT+ ++ A +EG D A +LL + P I Y ++I L K G + A
Sbjct: 381 LPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALE 440
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
++ M++ GI PD I+ +LI GFC++ V EA Q+ +E +RG TY L+I+GL
Sbjct: 441 LYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLC 500
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRA 148
+K++ +A V M+ G D
Sbjct: 501 KKKEIEMAIEVVEIMLTGGCKPDET 525
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P ++T+T+LVE R S A ++L+ M G PD + Y +++ + C+ G +
Sbjct: 238 NGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEE 297
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
++ ++ G+ + ++ N L++ C E ++ M P +TYN++I
Sbjct: 298 VASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILIN 357
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
GL + LS A + QM+E+ D ++ A S++
Sbjct: 358 GLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEG 398
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G +PD +T+ +++ ++G A LL+ M+ G PD I Y T+I + G
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + D ++ G PP +I+ L+ C+ + A+++ E+M G YPD VTYN ++
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + V ++ G L+ L+ +
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS 323
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+VT+ LV R G+ + ++ + G+ + + Y T++ LC
Sbjct: 274 GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEV 333
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I M + P VI+ N LING CK+ +S A+ + +M + PD VTYN ++
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393
Query: 122 LIVEKKLSVASRVWG 136
+ E + A + G
Sbjct: 394 MSKEGMVDDAIELLG 408
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P V+T+ IL+ + A QM + PD + Y T++G + K G + A +
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ PP +I+ N++I+G K + +A++LY +M G +PD++T +I G
Sbjct: 407 LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCR 466
Query: 125 EKKLSVASRVWGQMMEKG 142
+ A +V + +G
Sbjct: 467 ANLVEEAGQVLKETSNRG 484
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ + VT+ L+ + D +++L+ M + P I Y +I LCK+ +
Sbjct: 308 HGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSR 367
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F M+EQ PD+++ N ++ K V +A++L +++ P +TYN +I
Sbjct: 368 AIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 427
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
GL + + A ++ QM++ G D LI R
Sbjct: 428 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCR 466
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 69/156 (44%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PDV+T+ ++ G+++ A + + G P I YT ++ +C+
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR 262
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + DM +G PD+++ N+L+N C+ + E + + + S G + VTYN ++
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + + M + + ILI+
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILING 358
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
A KL++ M + P + ++ L + ++ A I MV G PD I+ N +I
Sbjct: 123 ACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIG 182
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
CK + A+ L E+M G PD +TYN +IR + A R W ++ G
Sbjct: 183 NLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNG 239
>AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G09900.1); Has 18740 Blast hits to 5421
proteins in 159 species: Archae - 3; Bacteria - 12;
Metazoa - 272; Fungi - 258; Plants - 17650; Viruses - 2;
Other Eukaryotes - 543 (source: NCBI BLink). |
chr2:15195663-15197156 FORWARD
Length = 497
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKM-GISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
F ++A+ R D A D M ++ P+ Y T++ KSG + A + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
++ PDV + N LING+C+S + A+ L+ EM+ +G P+ V++N +IRG + K+
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 129 SVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
++ +M+E G A EIL+ R+
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREG 312
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+V + +V +++ G D A + +M K PD + +I C+S K LA +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M E+G P+V+S N LI GF S ++ E +++ EM G E T +++ GL
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
E ++ A G LD N +L S
Sbjct: 311 EGRVDDAC---------GLVLDLLNKRVLPS 332
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
T ILV+ REG D A L+ + + P Y +++ LC K A + +
Sbjct: 299 ATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEE 358
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
+ ++G P I+C L+ G KS R +A E+M + G PD VT+NL++R L
Sbjct: 359 LWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDH 418
Query: 128 LSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
+ A+R+ KG+ D +L+S +++
Sbjct: 419 STDANRLRLLASSKGYEPDETTYHVLVSGFTKEG 452
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV TF IL+ + R D+A L +M + G P+ + + T+I SGKI +
Sbjct: 226 PDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKM 285
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+M+E G +C L++G C+ RV +A L ++ ++ P E Y ++ L
Sbjct: 286 AYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCG 345
Query: 125 EKKLSVASRVWGQMMEKGFT 144
E K A + ++ +KG T
Sbjct: 346 ENKAVRAMEMMEELWKKGQT 365
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+LP + LVE E + A ++++++ K G +P I TT++ L KSG+ A
Sbjct: 329 VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKAS 388
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
M+ GI PD ++ N L+ C S ++A +L S+G PDE TY++++ G
Sbjct: 389 GFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Query: 123 IVEKKLSVASRVWGQMMEKGFTLD 146
E + + +M++K D
Sbjct: 449 TKEGRRKEGEVLVNEMLDKDMLPD 472
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P + T LVE + G ++ A +++M GI PD + + ++ LC S A
Sbjct: 363 GQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDA 422
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + +G PD + + L++GF K R E L EM + PD TYN ++ G
Sbjct: 423 NRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDG 482
Query: 122 LIVEKKLS 129
L K S
Sbjct: 483 LSCTGKFS 490
>AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217) |
chr1:29900617-29903127 FORWARD
Length = 836
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 80/153 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P F L++++ + G D A +L D+M K G P+ YT II KSGK+ +A
Sbjct: 378 GHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVA 437
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
T+F DM + G P + + L+ S +V AM++Y M + G P +Y ++
Sbjct: 438 MTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTL 497
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L ++ + VA ++ +M G+++D S++L+
Sbjct: 498 LANKRLVDVAGKILLEMKAMGYSVDVCASDVLM 530
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D T+ L+ FL +G A ++ + M K D Y II L KSG++ A +F
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF 336
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M E+ + P ++L++ K+ R+ +M++Y EMQ G P + +I
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA 396
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
KL A R+W +M + GF + ++I ++++
Sbjct: 397 GKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAK 430
>AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4543265-4545256 REVERSE
Length = 634
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G LP + T + L + R SD K + ++ G + Y+ +I LCK+G++
Sbjct: 356 TGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRE 415
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
++T +M ++G+ PDV NALI CK+ + A +L++EM G + TYN++IR
Sbjct: 416 SYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIR 475
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
L E + + R++ +M+E+G D
Sbjct: 476 KLSEEGEAEESLRLFDKMLERGIEPD 501
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G ++ ++++++ + G + L +M K G++PD Y +I CK+ I
Sbjct: 391 KGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRP 450
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ +M +G ++ + N LI + E+++L+++M RG PDE Y +I
Sbjct: 451 AKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIE 510
Query: 121 GLIVEKKLSVASRVWGQMMEK 141
GL E K+ A V+ + ME+
Sbjct: 511 GLCKETKIEAAMEVFRKCMER 531
>AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29747102-29748832 REVERSE
Length = 576
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+ T++ L+EA +E +D A KLLD++ G P+ + Y ++ CK G+ A
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F ++ +G +V+S N L+ C R EA L EM P VTYN++I
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRD 160
L + A +V +M + N + ++A S +
Sbjct: 326 LAFHGRTEQALQVLKEM-------SKGNHQFRVTATSYN 357
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+V T L+ + A ++++ M GI PD YT ++ LCK G +G A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M + G P + ++ NAL+ G C +++++Q E + +G P+ TY+ ++
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
E+ A ++ +++ KG
Sbjct: 221 AYKERGTDEAVKLLDEIIVKG 241
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
+ ++ + R+G++ A +LL +MT+ G PD Y+ +I LC G A + M
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 70 E-QGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
E + P V + NA+I G CK R AM+++E M + P+E TY +++ G+ E +L
Sbjct: 486 ESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDEL 545
Query: 129 SVASRVWGQM 138
+A V ++
Sbjct: 546 ELAKEVLDEL 555
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 79/154 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI+PD +T LV + G+ A +L+++M G + + Y ++ LC G +
Sbjct: 135 SGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQ 194
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ ++++G+ P+ + + L+ K EA++L +E+ +G P+ V+YN+++
Sbjct: 195 SLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLT 254
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
G E + A ++ ++ KGF + + IL+
Sbjct: 255 GFCKEGRTDDAMALFRELPAKGFKANVVSYNILL 288
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 30 LDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCK 89
L+ + G P+ T ++ LCK+ ++ A + MV GI PD + L+N CK
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 90 SFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRAN 149
V AMQL E+M+ G + VTYN ++RGL + L+ + + ++M+KG +
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 150 SEILISANSRD 160
L+ A ++
Sbjct: 214 YSFLLEAAYKE 224
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 76/190 (40%), Gaps = 42/190 (22%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIF---YTTIIGHLCKSGKIGLA 61
P VVT+ IL+ + G ++ A ++L +M+K G R+ Y +I LCK GK+ L
Sbjct: 314 PSVVTYNILINSLAFHGRTEQALQVLKEMSK-GNHQFRVTATSYNPVIARLCKEGKVDLV 372
Query: 62 HTIFCDMVEQGIPPDVISCNAL-----------------------------------ING 86
+M+ + P+ + NA+ I
Sbjct: 373 VKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITS 432
Query: 87 FCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF--- 143
C+ A QL EM G PD TY+ +IRGL +E + A V M E
Sbjct: 433 LCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKP 492
Query: 144 TLDRANSEIL 153
T+D N+ IL
Sbjct: 493 TVDNFNAMIL 502
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 44 FYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM 103
FY ++I LC+ G A + +M G PD + +ALI G C + AM++ M
Sbjct: 425 FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIM 484
Query: 104 -QSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+S P +N +I GL ++ +A V+ M+EK + IL+
Sbjct: 485 EESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILV 536
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE
Length = 711
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 70/118 (59%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD + F++L + F G D + +L +M M + P+ + Y T++ + ++GK GLA
Sbjct: 286 GWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLA 345
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
++F +M+E G+ P+ + AL+ + K+ +A+QL+EEM+++ D + YN ++
Sbjct: 346 RSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLL 403
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ D +T++ ++ R + A + ++M K G+ PD + Y+ I+ KSGK+
Sbjct: 215 DGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEE 274
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+++ V G PD I+ + L F ++ + +EM+S P+ V YN ++
Sbjct: 275 VLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLE 334
Query: 121 GLIVEKKLSVASRVWGQMMEKGFT 144
+ K +A ++ +M+E G T
Sbjct: 335 AMGRAGKPGLARSLFNEMLEAGLT 358
>AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15637177-15639450 REVERSE
Length = 757
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P T+ +++ F + A + + M GISPD + T+I C+ K+ A
Sbjct: 250 GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEA 309
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M I P V+S +I G+ RV + ++++EEM+S G P+ TY+ ++ G
Sbjct: 310 EKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPG 369
Query: 122 LIVEKKLSVASRVWGQMMEK 141
L K+ A + MM K
Sbjct: 370 LCDAGKMVEAKNILKNMMAK 389
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ + ++ L + LR G +AK+ ++M G+ P R Y ++ S ++ A
Sbjct: 215 GVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETA 274
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F DM +GI PD + N +INGFC+ ++ EA +L+ EM+ P V+Y +I+G
Sbjct: 275 LRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKG 334
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ ++ R++ +M G
Sbjct: 335 YLAVDRVDDGLRIFEEMRSSG 355
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 74/137 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D F +L+E++ + G + K+ +M +G+ Y ++ + + G+ +A
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMA 239
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F MV +G+ P + N ++ GF S R+ A++ +E+M++RG PD+ T+N +I G
Sbjct: 240 KRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMING 299
Query: 122 LIVEKKLSVASRVWGQM 138
KK+ A +++ +M
Sbjct: 300 FCRFKKMDEAEKLFVEM 316
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD TF ++ F R D A+KL +M I P + YTT+I ++
Sbjct: 285 GISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDG 344
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDE 112
IF +M GI P+ + + L+ G C + ++ EA + + M ++ P +
Sbjct: 345 LRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKD 395
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 29 LLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFC 88
LLD M + G+ D + +I K+G + + IF M + G+ + S N+L
Sbjct: 173 LLD-MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVIL 231
Query: 89 KSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRA 148
+ R A + + +M S G P TYNL++ G + +L A R + M +G + D A
Sbjct: 232 RRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDA 291
Query: 149 NSEILISANSR 159
+I+ R
Sbjct: 292 TFNTMINGFCR 302
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N I P VV++T +++ +L D ++ ++M GI P+ Y+T++ LC +GK+
Sbjct: 319 NKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVE 378
Query: 61 AHTIFCDMVEQGIPP 75
A I +M+ + I P
Sbjct: 379 AKNILKNMMAKHIAP 393
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P V FT L+ F +EG D A LLD+M + D + Y I K GK+ +A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F ++ G+ PD ++ ++I CK+ R+ EA++++E ++ P YN +I G
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
K A + + KG
Sbjct: 318 YGSAGKFDEAYSLLERQRAKG 338
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +P V+ + ++ + G D A K+ ++M K +P+ Y +I LC++GK+ A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M + G+ P+V + N +++ CKS ++ EA ++EEM + PDE+T+ +I G
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 122 LIVEKKLSVASRVWGQMME 140
L ++ A +V+ +M++
Sbjct: 457 LGKVGRVDDAYKVYEKMLD 475
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 78/141 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P VVT+ +++ + D A L ++ I + + Y+++I K G+I A
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ I +++++G+ P++ + N+L++ K+ ++EA+ ++ M+ P++VTY ++I G
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L +K + A W +M ++G
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQG 757
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 76/153 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P++ T+ L++A ++ + A M ++ +P+++ Y +I LCK K A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M +QG+ P IS +I+G K+ ++EA L++ ++ G PD YN +I G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L + A ++ + +G + +L+
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+PD +++IL+ ++ G ++ +L M + G D Y +I CK GK+ A+
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M +G P V++ ++I+G K R+ EA L+EE +S+ + V Y+ +I G
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 123 IVEKKLSVASRVWGQMMEKGFT 144
++ A + ++M+KG T
Sbjct: 668 GKVGRIDEAYLILEELMQKGLT 689
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+ ++ + G + + + +++ PD Y+ +I L K+G + +
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M EQG D + N +I+GFCK +V++A QL EEM+++G P VTY +I GL
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 125 EKKLSVASRVWGQMMEKGFTLD 146
+L A ++ + K L+
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELN 656
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+V + + +++F + G D+A K ++ G+ PD + YT++IG LCK+ ++ A +F
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+ + P + N +I G+ + + EA L E +++G P + YN I+ L
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356
Query: 126 KKLSVASRVWGQM 138
K+ A +V+ +M
Sbjct: 357 GKVDEALKVFEEM 369
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD +TF L++ + G D A K+ ++M + I YT++I + G+ H I
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ DM+ Q PD+ N ++ K+ + ++EE+++R PD +Y+++I GLI
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ ++ M E+G LD I+I
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 78/153 (50%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+VV ++ L++ F + G D A +L+++ + G++P+ + +++ L K+ +I A F
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M E P+ ++ LING CK + ++A ++EMQ +G P ++Y +I GL
Sbjct: 716 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKA 775
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISANS 158
++ A ++ + G D A +I S
Sbjct: 776 GNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P++ T+ IL++ R G D A +L D M K G+ P+ ++ LCKS K+ A +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M + PD I+ +LI+G K RV +A ++YE+M + + Y +I+
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 125 EKKLSVASRVWGQMMEKGFTLD 146
+ +++ M+ + + D
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPD 516
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G + D + I+++ F + G + A +LL++M G P + Y ++I L K ++ A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +F + + I +V+ ++LI+GF K R+ EA + EE+ +G P+ T+N ++
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L+ ++++ A + M E T ++ ILI+
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P +T L+ AF SD+ L QM ++G P +TT+I K G++ A ++
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+M + D++ N I+ F K +V A + + E+++ G PDEVTY +I L
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 125 EKKLSVASRVWGQM 138
+L A ++ +
Sbjct: 286 ANRLDEAVEMFEHL 299
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ PD VT+T ++ + D A ++ + + K P Y T+I +GK
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+++ +G P VI+ N ++ K +V EA++++EEM+ + P+ TYN++I
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILID 385
Query: 121 GLIVEKKLSVASRVWGQMMEKGF 143
L KL A + M + G
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGL 408
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
+ +T L++ F G + K+ M SPD T + + K+G+ +F +
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
+ + PD S + LI+G K+ +E +L+ M+ +G D YN++I G K
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 128 LSVASRVWGQMMEKGF 143
++ A ++ +M KGF
Sbjct: 603 VNKAYQLLEEMKTKGF 618
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 61/149 (40%), Gaps = 9/149 (6%)
Query: 18 LREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDV 77
LREG ++ M K P YTT+IG + T+F M E G P V
Sbjct: 149 LREGYD-----VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 78 ISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQ 137
LI GF K RV A+ L +EM+S D V YN+ I K+ +A + + +
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 138 MMEKGFTLDRANSE----ILISANSRDAA 162
+ G D +L AN D A
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEA 292
>AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7624178-7626058 FORWARD
Length = 626
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI DV T+ IL++ KLL M G++P+ + Y T++ LCK+GK+G
Sbjct: 176 SGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGR 235
Query: 61 AHTIFCDMVEQ-------------------------------GIPPDVISCNALINGFCK 89
A ++ +M E G PDV++ ++ C
Sbjct: 236 ARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCN 295
Query: 90 SFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRAN 149
RVSEA+++ E ++S+G D V N +++G K+ VA R + +M KG+ +
Sbjct: 296 EGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVET 355
Query: 150 SEILISA 156
+LI+
Sbjct: 356 YNLLIAG 362
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +PDVVT T ++E EG A ++L+++ G D + T++ C GK+ +A
Sbjct: 278 GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVA 337
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F +M +G P+V + N LI G+C + A+ + +M++ + T+N +IRG
Sbjct: 338 QRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRG 397
Query: 122 L 122
L
Sbjct: 398 L 398
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ P V + + + +G D K DQM G P I +I + GKI +
Sbjct: 454 LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESL 513
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ DMV +G P + NA+I GFCK +V ++ E+M RG PD +YN ++ L
Sbjct: 514 ELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEEL 573
Query: 123 IVEKKLSVASRVWGQMMEKGFTLD 146
V+ + A ++ +M+EK D
Sbjct: 574 CVKGDIQKAWLLFSRMVEKSIVPD 597
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLD-QMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
GI P + F +++ ++E DIA++ +M GI D Y ++ L + +IG
Sbjct: 142 GIKPSLKVFNSILDVLVKE-DIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGD 200
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ M G+ P+ + N L++ CK+ +V A L EM+ P++VT+N++I
Sbjct: 201 GFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILIS 256
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTL 145
E+KL + S V ++EK F+L
Sbjct: 257 AYCNEQKL-IQSMV---LLEKCFSL 277
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD F ++ F R ++D ++K GI P + +I+ L K I +A
Sbjct: 107 GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKE-DIDIA 165
Query: 62 HTIFC-DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
F M+ GI DV + L+ G + R+ + +L + M++ G P+ V YN ++
Sbjct: 166 REFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH 225
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L K+ A + +M E + ILISA
Sbjct: 226 ALCKNGKVGRARSLMSEMKEP----NDVTFNILISA 257
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +P ++ L+ + + G + + +L++ M G P + +I CK K+
Sbjct: 488 GGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNG 547
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPD 111
DM E+G PD S N L+ C + +A L+ M + PD
Sbjct: 548 IKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPD 597
>AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEE40 (maternal
effect embryo arrest 40) (TAIR:AT3G53700.1); Has 16848
Blast hits to 5324 proteins in 149 species: Archae - 2;
Bacteria - 6; Metazoa - 176; Fungi - 119; Plants -
16112; Viruses - 0; Other Eukaryotes - 433 (source: NCBI
BLink). | chr1:5760793-5762619 FORWARD
Length = 608
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 71/134 (52%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI V +++LV F R G A L ++M ++G SP+ + YT++I G +
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE 300
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A T+ + +G+ PD++ CN +I+ + + R EA +++ ++ R PD+ T+ I+
Sbjct: 301 AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILS 360
Query: 121 GLIVEKKLSVASRV 134
L + K + R+
Sbjct: 361 SLCLSGKFDLVPRI 374
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D T+T+ + A R G+ A K+ + K D F++ II L + GK A +F
Sbjct: 418 DCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLF 477
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+ + P DV+S I G ++ R+ EA L +M+ G YP+ TY II GL E
Sbjct: 478 KRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKE 537
Query: 126 KKLSVASRVWGQMMEKGFTLD 146
K+ ++ + +++G LD
Sbjct: 538 KETEKVRKILRECIQEGVELD 558
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Query: 6 DVVTFTILVEAFL-REGSSDIA--KKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ +F I + F R G D+ K +L +M G P+R + I+ C++G + A
Sbjct: 173 NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAF 232
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M+ GI V + L++GF +S +A+ L+ +M G P+ VTY +I+G
Sbjct: 233 QVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGF 292
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ + A V ++ +G D ++I +R
Sbjct: 293 VDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR 329
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ F ++ R G A +++ M GIS ++ ++ +SG+ A
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M++ G P++++ +LI GF V EA + ++QS G PD V NL+I
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT 326
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A +V+ + ++ D+ ++S+
Sbjct: 327 YTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
>AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:679487-681904 FORWARD
Length = 805
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMG------ISPDRIFYTTIIGHLCKSGKIG 59
D ++ I + F G D A L +M + PD Y ++I LC GK
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A ++ ++ G PD + LI G CKS+R+ +AM++Y EMQ G PD + YN ++
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLL 366
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
G + +K++ A +++ +M+++G ILI R+
Sbjct: 367 DGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNG 408
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
T+ ++ +F+++G A+ +LDQM + + D Y II L K G+ LA + +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
+QG D++ N LIN K+ R+ EA QL++ M+S G PD V+YN +I KL
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 129 SVASRVWGQMMEKGFTLDRANSEIL 153
A + M++ G + IL
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+ T+ L+ G + A + D++ G PD Y +I CKS ++ A I
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ +M G PD I N L++G K+ +V+EA QL+E+M G TYN++I GL
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 125 EKKLSVASRVWGQMMEKGFTLD 146
+ ++ + +KG +D
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVD 428
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 76/146 (52%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PD T+ IL++ + D A ++ +M G PD I Y ++ K+ K+
Sbjct: 318 SGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTE 377
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F MV++G+ + N LI+G ++ R L+ +++ +G + D +T++++
Sbjct: 378 ACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGL 437
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
L E KL A ++ +M +GF++D
Sbjct: 438 QLCREGKLEGAVKLVEEMETRGFSVD 463
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+ T+ ++++ + G +D+A +LD++TK G D + Y T+I L K+ ++ A +F
Sbjct: 664 DIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLF 723
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
M GI PDV+S N +I K+ ++ EA + + M G P+ VT
Sbjct: 724 DHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG +PD + + L++ L+ A +L ++M + G+ Y +I L ++G+
Sbjct: 353 NGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEA 412
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
T+FCD+ ++G D I+ + + C+ ++ A++L EEM++RG D VT + ++
Sbjct: 413 GFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLI 472
Query: 121 GL 122
G
Sbjct: 473 GF 474
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIF-YTTIIGHLCKSGKIGLAHTI 64
DV + +L +G +A KL + MG++ + Y +++ K G A +
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M E D+ + N +I G K R A + + + +G Y D V YN +I L
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+L A++++ M G D + +I NS+
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSK 747
>AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5949006-5949644 REVERSE
Length = 212
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PDV T+ +++ R S A+KL +M + G+ PD I Y ++I LCK K+ A
Sbjct: 44 GLQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA 99
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + + N LING+CK+ RV + M L+ EM RG + +TY +I G
Sbjct: 100 ---------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHG 150
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ A ++ +M+ G
Sbjct: 151 FRQVGDFNTALDIFQEMVSNG 171
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 33 MTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFR 92
M + + D Y II LCK+GK A IF +++ G+ PDV + N +I +
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 93 VSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRV 134
+ A +LY EM RG PD +TYN +I GL + KL+ A +V
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV 102
>AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11126151-11128334 FORWARD
Length = 727
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G++ + TF ILV+ + G + ++L +M + PD YT +I L G +
Sbjct: 257 DGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDA 316
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ ++ +M I PDV++ L+ G CK RV +L+ EM+ + D Y ++I
Sbjct: 317 SLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIE 376
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
G + + K+ A +W +++ G+ D
Sbjct: 377 GFVADGKVRSACNLWEDLVDSGYIAD 402
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV +T +++ + EG+ D + ++ D+M + I PD + Y T++ LCK G++ + +
Sbjct: 296 PDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYEL 355
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M + I D LI GF +V A L+E++ G D YN +I+GL
Sbjct: 356 FMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCS 415
Query: 125 EKKLSVASRVWGQMMEKGFTLD 146
++ A +++ +E+ D
Sbjct: 416 VNQVDKAYKLFQVAIEEELEPD 437
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 29 LLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFC 88
+ ++M K G P Y I+ L K+G LA ++ D E G+ + + L+ G C
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 89 KSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQM 138
K+ R+ E +++ + M+ PD Y +I+ L+ E L + RVW +M
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEM 324
>AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6951349-6952845 REVERSE
Length = 498
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+V ++ +L+EA+ G A+K+ ++M G+ D + Y T+IG LC + ++ A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F DM +GI ++ L+NG+CK+ V + +Y EM+ +G D +T ++ G
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 122 L 122
L
Sbjct: 396 L 396
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTK-MGISPDRIFYTTIIGHLCKSGKIGLA 61
I P+ TF ++ +F REG +++ +++ +M + +G SP+ Y ++ C G + A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M +G+ D+++ N +I G C +F V +A +L+ +M +G +TY ++ G
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ V+ +M KGF D E L+
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALV 393
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 10 FTILVEAF-LREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
+ + E F L + S D AKK++ + I P+ + +++ + G+ + I+ +M
Sbjct: 217 YKMYREVFGLDDVSVDEAKKMIGK-----IKPNATTFNSMMVSFYREGETEMVERIWREM 271
Query: 69 VEQ-GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
E+ G P+V S N L+ +C +SEA +++EEM+ RG D V YN +I GL +
Sbjct: 272 EEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFE 331
Query: 128 LSVASRVWGQMMEKG 142
+ A ++ M KG
Sbjct: 332 VVKAKELFRDMGLKG 346
>AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30148738-30149931 FORWARD
Length = 397
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI D V+F I +++F G D A + +M K G++PD + YTT+I L K + +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ ++ MV +G P++ + N I R +A L M PD +TYN++I+G
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
+ + +A RV+ M KG+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGY 313
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 55/104 (52%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD +T+ ++++ F D+A+++ M G P+ Y T+I +LCK+G LA+T+
Sbjct: 280 PDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTM 339
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGP 108
D + + P++ + L+ G K ++ +A + E + R P
Sbjct: 340 CKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRVP 383
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PDVVT+T L+ A + I L + M G P+ + I L +
Sbjct: 206 SGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWD 265
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ + M + + PD I+ N +I GF + A ++Y M +G P+ Y +I
Sbjct: 266 ANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIH 325
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L +A + M K + + E+L+
Sbjct: 326 YLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKG 361
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 62/133 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P++ TF + ++ + + A LL M K+ + PD I Y +I + +A
Sbjct: 242 GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMA 301
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ M +G P++ +I+ CK+ A + ++ + YP+ T ++++G
Sbjct: 302 ERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKG 361
Query: 122 LIVEKKLSVASRV 134
L+ + +L A +
Sbjct: 362 LVKKGQLDQAKSI 374
>AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17160224-17162221 REVERSE
Length = 665
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P V+++ L+ A + D A ++ + M K+GI P+ YTT+ L K L
Sbjct: 487 NGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNL 546
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
T+ +M +GI P V++ NA+I+G ++ A + + M+S P+E+TY ++I
Sbjct: 547 LDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIE 606
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTL 145
L + K +A + + +G L
Sbjct: 607 ALANDAKPRLAYELHVKAQNEGLKL 631
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFC 66
V F IL+ A + G +LL++M G+ P R + ++ K+ + A IF
Sbjct: 423 VSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFK 482
Query: 67 DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEK 126
MV+ G P VIS AL++ K EA +++ M G P+ Y + L ++
Sbjct: 483 AMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQ 542
Query: 127 KLSVASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
K ++ + +M KG +IS +R+ S
Sbjct: 543 KFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLS 579
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 53/119 (44%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P++ +T + + ++ LL +M GI P + + +I ++G G+A
Sbjct: 523 GIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVA 582
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ F M + + P+ I+ LI + A +L+ + Q+ G Y+ +++
Sbjct: 583 YEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVK 641
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE
Length = 838
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%)
Query: 30 LDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCK 89
L+ M ++GI P + YTT+I SG++ A +F +M +G P+V + N++I G C
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 90 SFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
+ EA L +EM+SRG P+ V Y+ ++ L KLS A +V +M++KG
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P V+ +T L++ ++ G D AK++ +MT G P+ Y ++I LC +G+ A
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY 109
+ +M +G P+ + + L+ K+ ++SEA ++ +EM +G Y
Sbjct: 779 CWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHY 826
>AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19214445-19215878 REVERSE
Length = 477
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PDV+T+T ++ + G D A +L +M+K + + Y+ I+ +CKSG + A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 62 HTIFCDMVEQG----IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNL 117
+ +M ++ I P+ ++ +I FC+ RV EA+ + + M +RG P+ VT +
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 118 IIRGLI 123
+I+G++
Sbjct: 315 LIQGVL 320
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
+ D V + +++ F +G +IA L+ +M +G+ PD I YT++I C +GKI A
Sbjct: 160 NVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDA 219
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGP----YPDEVTYNL 117
+ +M + + ++ + ++ G CKS + A++L EM+ P+ VTY L
Sbjct: 220 WRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTL 279
Query: 118 IIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+I+ ++++ A V +M +G +R + +LI
Sbjct: 280 VIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLI 316
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 65/133 (48%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+V T I++ + +D A +L + + + D + Y +I G + +A +
Sbjct: 129 NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+M G+ PDVI+ ++ING+C + ++ +A +L +EM + VTY+ I+ G+
Sbjct: 189 KEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKS 248
Query: 126 KKLSVASRVWGQM 138
+ A + +M
Sbjct: 249 GDMERALELLAEM 261
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 7/160 (4%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIA--KKLLDQMTKMG-ISPDRIFYTTIIGHLCKSGKI 58
G +P+ VT +L++ L E D+ KL+D++ K+G +S F + + L + +
Sbjct: 304 GCMPNRVTACVLIQGVL-ENDEDVKALSKLIDKLVKLGGVSLSECFSSATVS-LIRMKRW 361
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYP--DEVTYN 116
A IF M+ +G+ PD ++C+ + C R + LY+E++ + D +
Sbjct: 362 EEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHA 421
Query: 117 LIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+++ GL + A+++ M++K L ++ E +I A
Sbjct: 422 VLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEA 461
>AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076) |
chr3:11238421-11240125 FORWARD
Length = 540
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G + +T+++LV F+R G S++A + D+M IS +I K K L
Sbjct: 243 DGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDL 302
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A IF M+++G+ P++++CN LIN K+ +V ++Y ++S G PDE T+N ++
Sbjct: 303 ALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLT 362
Query: 121 GL 122
L
Sbjct: 363 AL 364
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
++ A +E D+A K+ M K G+ P+ + T+I L K+GK+GL ++ + G
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG-PYPDEVTYNLIIRGLIVEKKLSV- 130
PD + NAL+ K+ R + +QL++ ++S +E YN ++ +KL
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNT---AMVSCQKLGYW 406
Query: 131 --ASRVWGQMMEKGFTLDRANSEILISANSRDAAS 163
A ++ +M G T+ ++ ++ISA + S
Sbjct: 407 EKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKS 441
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 80/155 (51%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVVTFT ++ + +G + + + + M G+ P+ + Y ++G G G A ++
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
D+ + GI PDV+S L+N + +S + +A +++ M+ P+ VTYN +I
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L+ A ++ QM + G + + L++A SR
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD T+ L+ A R G A L+D M + I+P R Y +I SG A +
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M + G+ PD+++ N +++ + + S+A+ +E M+ PD T+N+II L
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 125 EKKLSVASRVWGQMMEK 141
+ S A ++ M EK
Sbjct: 296 LGQSSQALDLFNSMREK 312
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NGI+PDVV++T L+ ++ R AK++ M K P+ + Y +I +G +
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A IF M + GI P+V+S L+ +S + + QSRG + YN I
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
I +L A ++ M +K D ILIS + R
Sbjct: 504 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P++V++ L+ A+ G S A +L + + GI PD + YT ++ +S + G A
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M ++ P+V++ NALI+ + + ++EA++++ +M+ G P+ V+ ++
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRA--NSEI 152
KK V +G L+ A NS I
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 502
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D VTFTIL+ R A L +M + I + Y++++ K G++ A +IF
Sbjct: 529 DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIF 588
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
M G PDVI+ ++++ + S + +A +L+ EM++ G PD + + ++R
Sbjct: 589 NQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 645
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
++ ++ A+ ++G A+ + +QM G PD I YT+++ S K G A +F +M
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 627
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR 106
GI PD I+C+AL+ F K + S L + M+ +
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
+ +++ R D A+ L +M K PD Y +I ++G+ A + DM+
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
I P + N LIN S EA+++ ++M G PD VT+N+++ ++ S
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 130 VA 131
A
Sbjct: 266 KA 267
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ PD+VT I++ A+ A + M + PD + II L K G+
Sbjct: 242 NGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQ 301
Query: 61 AHTIFCDMVEQGIP--PDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A +F M E+ PDV++ ++++ + + ++E M + G P+ V+YN +
Sbjct: 302 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 361
Query: 119 IRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ V A V G + + G D + L+++ R
Sbjct: 362 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGR 402
>AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5117489-5119060 REVERSE
Length = 523
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+ +++ + G+ AK+ + PD + Y T+I L K GK+G A ++
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M + PDV CN +I+ C R+ EA++++ E+ +GP P+ VTYN +++ L
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLC-- 363
Query: 126 KKLSVASRVW 135
K+ +VW
Sbjct: 364 -KIRRTEKVW 372
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVV++ ++ A ++G A +L M +PD +I LC +I A +
Sbjct: 280 PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEV 339
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGP--YPDEVTYNLIIR 120
F ++ E+G P+V++ N+L+ CK R + +L EEM+ +G P++VT++ +++
Sbjct: 340 FREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK 397
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
T+ +L+ + D A + ++ + GI D + + ++ LC+ + A T+FC
Sbjct: 180 TYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSR 239
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
+ D+ + N ++NG+C V EA + ++++ + PD V+Y +I L + KL
Sbjct: 240 RRE-FGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKL 298
Query: 129 SVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
A ++ M + R N ++ I N DA
Sbjct: 299 GKAMELYRAMWDT-----RRNPDVKICNNVIDA 326
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 80/155 (51%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDVVTFT ++ + +G + + + + M G+ P+ + Y ++G G G A ++
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
D+ + GI PDV+S L+N + +S + +A +++ M+ P+ VTYN +I
Sbjct: 246 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 305
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L+ A ++ QM + G + + L++A SR
Sbjct: 306 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD T+ L+ A R G A L+D M + I+P R Y +I SG A +
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M + G+ PD+++ N +++ + + S+A+ +E M+ PD T+N+II L
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 163
Query: 125 EKKLSVASRVWGQMMEK 141
+ S A ++ M EK
Sbjct: 164 LGQSSQALDLFNSMREK 180
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NGI+PDVV++T L+ ++ R AK++ M K P+ + Y +I +G +
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A IF M + GI P+V+S L+ +S + + QSRG + YN I
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 371
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
I +L A ++ M +K D ILIS + R
Sbjct: 372 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P++V++ L+ A+ G S A +L + + GI PD + YT ++ +S + G A
Sbjct: 218 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 277
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M ++ P+V++ NALI+ + + ++EA++++ +M+ G P+ V+ ++
Sbjct: 278 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 337
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRA--NSEI 152
KK V +G L+ A NS I
Sbjct: 338 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 370
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D VTFTIL+ R A L +M + I + Y++++ K G++ A +IF
Sbjct: 397 DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIF 456
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
M G PDVI+ ++++ + S + +A +L+ EM++ G PD + + ++R
Sbjct: 457 NQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 513
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
++ ++ A+ ++G A+ + +QM G PD I YT+++ S K G A +F +M
Sbjct: 436 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 495
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR 106
GI PD I+C+AL+ F K + S L + M+ +
Sbjct: 496 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
+ +++ R D A+ L +M K PD Y +I ++G+ A + DM+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
I P + N LIN S EA+++ ++M G PD VT+N+++ ++ S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 130 VA 131
A
Sbjct: 134 KA 135
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ PD+VT I++ A+ A + M + PD + II L K G+
Sbjct: 110 NGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQ 169
Query: 61 AHTIFCDMVEQGIP--PDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A +F M E+ PDV++ ++++ + + ++E M + G P+ V+YN +
Sbjct: 170 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 229
Query: 119 IRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ V A V G + + G D + L+++ R
Sbjct: 230 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGR 270
>AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16091120-16092454 FORWARD
Length = 444
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P + +T+++ + G +L+QM + PD + YT ++ + A +
Sbjct: 240 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKL 299
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +++ G+ PDV + N ING CK + A+++ M G P+ VTYN++I+ L+
Sbjct: 300 FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVK 359
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
LS A +W +M G + +I+ISA
Sbjct: 360 AGDLSRAKTLWKEMETNGVNRNSHTFDIMISA 391
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+V +TI+++ + + A KL D++ +G++PD Y I LCK I A +
Sbjct: 275 PDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKM 334
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
M + G P+V++ N LI K+ +S A L++EM++ G + T++++I I
Sbjct: 335 MSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYI 393
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV T+ + + ++ + A K++ M K+G P+ + Y +I L K+G + A T+
Sbjct: 310 PDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTL 369
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEE 102
+ +M G+ + + + +I+ + + V A L EE
Sbjct: 370 WKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 407
>AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4903012-4904229 FORWARD
Length = 405
Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D IL++ G+ + A +LLD+ + P+ + ++ +I C GK A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M ++ I PD I+ N LI+G K RV E + L E M+ +G P+ TY ++ G
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L+ +K+ A + QM+ G
Sbjct: 317 LLDKKRNLEAKEMMSQMISWG 337
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+V+TF+ L+ F +G + A KLL++M K I PD I + +I L K G++ +
Sbjct: 235 PNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDL 294
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M +G P+ + ++ G R EA ++ +M S G P ++Y ++ GL
Sbjct: 295 LERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCE 354
Query: 125 EKKLSVASRVWGQMMEKGFT 144
K + V QM+ GF
Sbjct: 355 TKSVVEMDWVLRQMVNHGFV 374
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P +F ++ + D K+ K+G+ D +I LC+SG + A
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + +Q P+V++ + LI GFC + EA +L E M+ PD +T+N++I G
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 122 L 122
L
Sbjct: 282 L 282
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%)
Query: 21 GSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISC 80
G + A ++L M G P + I+ L + H IF + G+ D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 81 NALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMME 140
N LI G C+S + A+QL +E + P+ +T++ +IRG + K A ++ +M +
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 141 KGFTLDRANSEILISA 156
+ D ILIS
Sbjct: 266 ERIEPDTITFNILISG 281
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 6/156 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIG---HLCKSGKI 58
+ PD T++ L+ +F +EG D A L +M + +S D + Y+ +I LC K
Sbjct: 185 ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSK- 243
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A +IF + GI PD+++ N++IN + K+ EA L +EM G P+ V+Y+ +
Sbjct: 244 --AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 119 IRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ + K A V+ +M E LD I+I
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI 337
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 6 DVVTFTILVEAFLREGSSDIAK---KLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
D+ T I+++ + G D+ K +L + KM I P+ + Y TI+ ++ G A
Sbjct: 329 DLTTCNIMIDVY---GQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+F M + I +V++ N +I + K+ +A L +EMQSRG P+ +TY+ II
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW 445
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
KL A+ ++ ++ G +D+ + +I A R
Sbjct: 446 GKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYER 482
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 66/120 (55%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI PD+V + ++ + + A+ L+ +M + G+ P+ + Y+T++ ++ K
Sbjct: 254 SGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLE 313
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++F +M E D+ +CN +I+ + + V EA +L+ ++ P+ V+YN I+R
Sbjct: 314 ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR 373
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 31/172 (18%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTII---------GH- 51
GI P+ +T++ ++ + + G D A L ++ G+ D++ Y T+I GH
Sbjct: 430 GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHA 489
Query: 52 ---------------------LCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKS 90
L K+G+ A +F E G D+ +IN + ++
Sbjct: 490 KRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRN 549
Query: 91 FRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
R ++++E+M++ G +PD +++ +++ A V+ +M E+G
Sbjct: 550 QRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I +VVT+ +++ + + + A L+ +M GI P+ I Y+TII K+GK+ A
Sbjct: 396 IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAA 455
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
T+F + G+ D + +I + + + A +L E++ PD + I L
Sbjct: 456 TLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITIL 511
Query: 123 IVEKKLSVASRVWGQMMEKG 142
+ A+ V+ Q E G
Sbjct: 512 AKAGRTEEATWVFRQAFESG 531
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 71/137 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P++ F L++ FL D +++D M + G+ PD + ++T++ G +
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I+ DM+E GI PD+ + + L G+ ++ +A Q+ +M+ G P+ V Y II G
Sbjct: 621 EEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
Query: 122 LIVEKKLSVASRVWGQM 138
++ A +V+ +M
Sbjct: 681 WCSAGEMKKAMQVYKKM 697
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ PD + F ++ A G+ D A K+ ++M + G P + T+I K GK+
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 61 AHTIFCDMV--EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
+ + DM+ ++ + P+ +CN L+ +C ++ EA + +MQS G PD VT+N +
Sbjct: 443 SSRLL-DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL 501
Query: 119 IRG 121
+
Sbjct: 502 AKA 504
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P ++T+T LV A R+ L+ ++ K G+ PD I + II +SG + A
Sbjct: 349 GHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 408
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM-QSRGPYPDEVTYNLIIR 120
IF M E G P + N LI G+ K ++ E+ +L + M + P++ T N++++
Sbjct: 409 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 468
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
++K+ A + +M G D L A +R
Sbjct: 469 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 507
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLL-DQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G+ PDVVTF L +A+ R GS+ A+ ++ +M + P+ TI+ C+ GK+
Sbjct: 490 GVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEE 549
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F M E G+ P++ N+LI GF + ++ + M+ G PD VT++ ++
Sbjct: 550 ALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMN 609
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ ++ M+E G D IL +R
Sbjct: 610 AWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYAR 648
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DV + T L+ + G A + + + + G P I YTT++ L + ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+ + G+ PD I NA+IN +S + +AM+++E+M+ G P T+N +I+G
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 126 KKLSVASRVWGQMM 139
KL +SR+ M+
Sbjct: 438 GKLEESSRLLDMML 451
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH-T 63
P+ T ILV+A+ + + A ++ +M G+ PD + + T+ + G A
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
I M+ + P+V +C ++NG+C+ ++ EA++ + M+ G +P+ +N +I+G +
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL 577
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISANS 158
+ V M E G D L++A S
Sbjct: 578 NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS 612
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTII-GHLCKSGKIG 59
N + P+V T +V + EG + A + +M ++G+ P+ + ++I G L + G
Sbjct: 525 NKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDG 584
Query: 60 LAHTIFCDMVEQ-GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
+ + D++E+ G+ PDV++ + L+N + + ++Y +M G PD ++++
Sbjct: 585 VGEVV--DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
Query: 119 IRGLIVEKKLSVASRVWGQMMEKG 142
+G + A ++ QM + G
Sbjct: 643 AKGYARAGEPEKAEQILNQMRKFG 666
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%)
Query: 46 TTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS 105
T ++ L + G+ AH+IF ++E+G P +I+ L+ + + L +++
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 106 RGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
G PD + +N II L A +++ +M E G
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 419
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
PD +T++ L+ ++ + G +D A +L D+M + P YTT++G K GK+ A
Sbjct: 230 FPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALD 289
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+F +M G P V + LI G K+ RV EA Y++M G PD V N ++ L
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILG 349
Query: 124 VEKKLSVASRVWGQM 138
++ + V+ +M
Sbjct: 350 KVGRVEELTNVFSEM 364
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
+ ++++ F + G A L ++M G PD Y ++ + K+G I A+++ M
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
E G D+ S N ++NGF ++ A++++E ++ G PD VTYN ++
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 130 VASRVWGQMMEKGFTLD 146
A+R+ +M +KGF D
Sbjct: 602 EAARMMREMKDKGFEYD 618
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N + P +T L+ + + G + A L ++M + G SP YT +I L K+G++
Sbjct: 262 NCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDE 321
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ + DM+ G+ PDV+ N L+N K RV E ++ EM P V+YN +I+
Sbjct: 322 AYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIK 381
Query: 121 GLIVEKKLSVASRVWGQMME 140
L K W M+
Sbjct: 382 ALFESKAHVSEVSSWFDKMK 401
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P V T+T L++ + G D A M + G++PD +F ++ L K G++
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKS-FRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+F +M P V+S N +I +S VSE +++M++ P E TY+++I
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 121 GLIVEKKLSVASRVWGQMMEKGF 143
G ++ A + +M EKGF
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGF 440
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 81/159 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+ + P T++IL++ + + + A LL++M + G P Y ++I L K+ +
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ +F ++ E +I F K ++SEA+ L+ EM+++G PD YN ++
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
G++ ++ A+ + +M E G D + I+++ +R
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFAR 561
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMG-ISPDRIFYTTIIGHLCKSGKIGLAHT 63
P T+ ++ ++EG + ++ +M G PD I Y+ +I K G+ A
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+F +M + + P L+ + K +V +A+ L+EEM+ G P TY +I+GL
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 124 VEKKLSVASRVWGQMMEKGFTLD 146
++ A + M+ G T D
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPD 337
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDV + L+ ++ G + A LL +M + G D + I+ ++G A
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRA 568
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+F + GI PD ++ N L+ F + EA ++ EM+ +G D +TY+ I+
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI+PD+ T++ LVE F + + LL +M G PD Y ++ KSG I A
Sbjct: 277 GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEA 336
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+F M G P+ + + L+N F +S R + QL+ EM+S PD TYN++I
Sbjct: 337 MGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD+VT+ L+ A G D A+ + M GI PD Y+ ++ K ++
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKV 301
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M G PD+ S N L+ + KS + EAM ++ +MQ+ G P+ TY++++
Sbjct: 302 CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ +++ +M D A ILI
Sbjct: 362 FGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTII-----GHLCKSG 56
G+ V ++T L+ A+ R G + + +LLD+M ISP + Y T+I G L G
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 57 KIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYN 116
+GL F +M +GI PD+++ N L++ EA ++ M G PD TY+
Sbjct: 231 LLGL----FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 117 LIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
++ ++L + G+M G D + +L+ A ++ +
Sbjct: 287 HLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS 332
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G LPD+ ++ +L+EA+ + GS A + QM G +P+ Y+ ++ +SG+
Sbjct: 312 GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV 371
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+F +M PD + N LI F + E + L+ +M PD TY II
Sbjct: 372 RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 3 ILPDVVTFTILVEAFLREG-SSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
I P ++T+ ++ A R G + L +M GI PD + Y T++ G A
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M + GI PD+ + + L+ F K R+ + L EM S G PD +YN+++
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
+ A V+ QM G T + +L++
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+ +TI++ REG D ++ D+M G+S YT +I ++G+ + +
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEA-MQLYEEMQSRGPYPDEVTYNLIIRGLI 123
M + I P +++ N +IN + E + L+ EM+ G PD VTYN ++
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 124 VEKKLSVASRVWGQMMEKGFTLD 146
+ A V+ M + G D
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPD 281
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTK-MGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
F ++ + F G + +L M + + P+ YT +I L + G + +F +M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR-----GLI 123
QG+ V S ALIN + ++ R +++L + M++ P +TYN +I GL
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
E L ++ +M +G D L+SA
Sbjct: 228 WEGLLG----LFAEMRHEGIQPDIVTYNTLLSA 256
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 52/121 (42%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ T+++L+ F + G D ++L +M PD Y +I + G
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
T+F DMVE+ I PD+ + +I K +A ++ + M + P Y +I
Sbjct: 407 VTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEA 466
Query: 122 L 122
Sbjct: 467 F 467
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 58/119 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N I+P +T ++EAF + + A + M ++G +P + +++ + G +
Sbjct: 451 NDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKE 510
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+ I +V+ GIP + + NA I + + + EA++ Y +M+ PDE T ++
Sbjct: 511 SEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL 569
>AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3606490-3608409 FORWARD
Length = 602
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P T+ + F + ++ L ++ + G SPDR+ Y I+ LC+ GK+ LA
Sbjct: 385 GVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLA 444
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M +GI PD+++ LI+ C+ + EA + ++ RG P +T+ +I G
Sbjct: 445 MQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNG 504
Query: 122 LIVEKKLSVASRVWGQM 138
L + +A R+ M
Sbjct: 505 LRSKGMSDMAKRLSSLM 521
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 35/188 (18%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQM--TKMGIS-------------------- 39
+ P VVT+ L+E + R IA ++L++M +M I+
Sbjct: 280 NVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEA 339
Query: 40 -------------PDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALING 86
P + Y +++ + CK+G + A I M+ +G+ P + N
Sbjct: 340 LGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKY 399
Query: 87 FCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
F K + E M LY ++ G PD +TY+LI++ L + KLS+A +V +M +G D
Sbjct: 400 FSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPD 459
Query: 147 RANSEILI 154
+ +LI
Sbjct: 460 LLTTTMLI 467
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P +VT+ LV+ F + G A K+L M G+ P Y + K K +
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNL 412
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ ++E G PD ++ + ++ C+ ++S AMQ+ +EM++RG PD +T ++I L
Sbjct: 413 YFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCR 472
Query: 125 EKKLSVASRVWGQMMEKG 142
+ L A + + +G
Sbjct: 473 LEMLEEAFEEFDNAVRRG 490
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
+P V F IL+ + R A+KL ++M M + P + Y T+I C+ ++ +A
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAME 306
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+ +M + + + N +I+G ++ R+SEA+ + E P VTYN +++
Sbjct: 307 VLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFC 366
Query: 124 VEKKLSVASRVWGQMMEKG 142
L AS++ MM +G
Sbjct: 367 KAGDLPGASKILKMMMTRG 385
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +P V TF L+ + + + A ++LD+MT G+S + YT I+ G G A
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F + +G+ D+ + AL+ CKS R+ A+ + +EM +R + YN++I G
Sbjct: 679 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 738
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ A+ + QM ++G D ISA S+
Sbjct: 739 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
+ IL++ + R G A L+ QM K G+ PD YT+ I K+G + A +M
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
G+ P++ + LI G+ ++ +A+ YEEM++ G PD+ Y+ ++ L+ ++
Sbjct: 792 ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIA 851
Query: 130 VASRVWG------QMMEKGFTLD 146
A G +M+E G +D
Sbjct: 852 EAYIYSGVMTICKEMVEAGLIVD 874
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PDV+ + ++ AF G+ D A + + +M K+ P + II KSG + +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M G P V + N LING + ++ +A+++ +EM G +E TY I++G
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
A + ++ +G +D E L+ A
Sbjct: 669 YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P VVT+ L+ + + G A ++ M + G+ + Y+ +I K A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F DMV++G+ PDVI N +I+ FC + A+Q +EMQ P T+ II G
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 72/145 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ ++ T+++++ F++ A + + M K G+ PD I Y II C G + A
Sbjct: 514 GVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRA 573
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+M + P + +I+G+ KS + ++++++ M+ G P T+N +I G
Sbjct: 574 IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L+ ++++ A + +M G + +
Sbjct: 634 LVEKRQMEKAVEILDEMTLAGVSAN 658
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D+ T+ L++A + G A + +M+ I + Y +I + G + A
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M ++G+ PD+ + + I+ K+ ++ A Q EEM++ G P+ TY +I+G
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
A + +M G D+A L+++
Sbjct: 809 WARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 26 AKKLLDQMTKMGI-SPDRIFYTTIIGH-LCKSGKIGLAHTIFCDMVEQGIPPDVISCNAL 83
A+ L+ +M + GI +P I++T + G+ + K GL +F + E G P V++ L
Sbjct: 433 AEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGL--VVFKRLKECGFTPTVVTYGCL 490
Query: 84 INGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
IN + K ++S+A+++ M+ G + TY+++I G + K + A V+ M+++G
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 144 TLD 146
D
Sbjct: 551 KPD 553
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 29 LLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFC 88
+ ++ + G +P + Y +I K GKI A + M E+G+ ++ + + +INGF
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 89 KSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
K + A ++E+M G PD + YN II
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
>AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26339876-26341789 REVERSE
Length = 637
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD+V +T L+ + G A LL M + G P+ YT +I LCK ++ A
Sbjct: 282 GFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEA 341
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M DV++ AL++GFCK ++ + + ++M +G P E+TY I+
Sbjct: 342 MKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIM-- 399
Query: 122 LIVEKKLSVASRVWGQMMEK 141
+ EKK S + ++MEK
Sbjct: 400 VAHEKKESFEECL--ELMEK 417
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
FT L+ + R G AK +L QM + G PD + YT ++ +GK+ A+ + DM
Sbjct: 255 FTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMR 314
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
+G P+ LI CK R+ EAM+++ EM+ D VTY ++ G K+
Sbjct: 315 RRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKID 374
Query: 130 VASRVWGQMMEKGF 143
V M++KG
Sbjct: 375 KCYIVLDDMIKKGL 388
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+ +T+L++A + + A K+ +M + D + YT ++ CK GKI
Sbjct: 317 GFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKC 376
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + DM+++G+ P ++ ++ K E ++L E+M+ +PD YN++IR
Sbjct: 377 YIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRL 436
Query: 122 LIVEKKLSVASRVWGQMMEKGFT 144
++ A R+W +M E G +
Sbjct: 437 ACKLGEVKEAVRLWNEMEENGLS 459
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD F L++A + GS A KL + M +M + ++T+++ C+ GK+ A
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEA 271
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E G PD++ L++G+ + ++++A L +M+ RG P+ Y ++I+
Sbjct: 272 KYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQA 331
Query: 122 LIVEKKLSVASRVWGQM 138
L ++ A +V+ +M
Sbjct: 332 LCKVDRMEEAMKVFVEM 348
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 10 FTILVEAFLREGSSDIAKK---LLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFC 66
F +LV+ F S+D+ KK +LD+M K G PD + ++ LCK G + A +F
Sbjct: 186 FVVLVQRF---ASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFE 242
Query: 67 DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEK 126
DM P ++ +L+ G+C+ ++ EA + +M G PD V Y ++ G
Sbjct: 243 DM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAG 301
Query: 127 KLSVASRVWGQMMEKGFTLDRANSEILISA 156
K++ A + M +GF + +LI A
Sbjct: 302 KMADAYDLLRDMRRRGFEPNANCYTVLIQA 331
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G++P +T+ ++ A ++ S + +L+++M ++ PD Y +I CK G++
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKE 445
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY--PDEVTYNLI 118
A ++ +M E G+ P V + +ING + EA ++EM +RG + T L+
Sbjct: 446 AVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLL 505
Query: 119 IRGLIVEKKLSVASRVWGQMMEKG 142
+ ++ +KKL +A VW + KG
Sbjct: 506 LNTVLKDKKLEMAKDVWSCITSKG 529
>AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27598412-27599812 FORWARD
Length = 466
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 38/176 (21%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ PD TF +L + R A KLL++M + G P+ Y I C++G + A
Sbjct: 162 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 221
Query: 63 TIF---------------------------------C-----DMVEQGIPPDVISCNALI 84
+F C M+ G PDV + +I
Sbjct: 222 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 281
Query: 85 NGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMME 140
G C + +V EA + +EM ++G PD VTYN +R L +K A +++G+M+E
Sbjct: 282 EGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVE 337
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P TF +++ A + ++ +L+ +M G PD Y +I +C + K+ A+
Sbjct: 237 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 296
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+M +G PPD+++ N + C++ + EA++LY M P TYN++I
Sbjct: 297 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFE 356
Query: 125 EKKLSVASRVWGQM 138
A W +M
Sbjct: 357 MDDPDGAFNTWTEM 370
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G LPDV T+ ++E D A K LD+M+ G PD + Y + LC++ K A
Sbjct: 269 GCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEA 328
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ MVE P V + N LI+ F + A + EM R D TY +I G
Sbjct: 329 LKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMING 388
Query: 122 LIVEKKLSVASRVWGQMMEKGFTL 145
L + A + +++ KG L
Sbjct: 389 LFDCHRAKEACFLLEEVVNKGLKL 412
>AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4229994-4231178 REVERSE
Length = 394
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
I PDV ++ L++ +GS A L+D++ G+ PD I + ++ GK
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I+ MVE+ + D+ S NA + G + E + L+++++ PD T+ +I+G
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ E KL A W + +EK
Sbjct: 292 FVSEGKLDEAI-TWYKEIEKN 311
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQ- 71
++ + R G + A+K+ D+M + + + ++ S K L IF ++ +
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 72 GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVA 131
I PDV S N LI G C +EA+ L +E++++G PD +T+N+++ + K
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 132 SRVWGQMMEKGFTLD 146
++W +M+EK D
Sbjct: 232 EQIWARMVEKNVKRD 246
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD +TF IL+ +G + +++ +M + + D Y + L K
Sbjct: 207 GLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEM 266
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++F + + PDV + A+I GF ++ EA+ Y+E++ G P + +N ++
Sbjct: 267 VSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPA 326
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRA 148
+ L A + ++ K +D A
Sbjct: 327 ICKAGDLESAYELCKEIFAKRLLVDEA 353
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMT-KMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
++F L+ A + D+ + + ++ K+ I PD Y T+I LC G A +
Sbjct: 141 ALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALI 200
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
++ +G+ PD I+ N L++ + E Q++ M + D +YN + GL +E
Sbjct: 201 DEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAME 260
Query: 126 KK 127
K
Sbjct: 261 NK 262
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 51/101 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N + PDV TFT +++ F+ EG D A ++ K G P + + +++ +CK+G +
Sbjct: 276 NELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLES 335
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYE 101
A+ + ++ + + D +++ K + EA ++ E
Sbjct: 336 AYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
>AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G15010.1); Has
14980 Blast hits to 5082 proteins in 161 species: Archae
- 0; Bacteria - 2; Metazoa - 156; Fungi - 253; Plants -
14070; Viruses - 0; Other Eukaryotes - 499 (source: NCBI
BLink). | chr5:17618948-17620588 FORWARD
Length = 546
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 2 GILP-DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G +P D ++ I++ + + G + +K+L +M + G PD + Y+ +I L ++G+I
Sbjct: 249 GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIND 308
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ IF ++ +G PD NA+I F + E+M+ Y M P+ TY+ ++
Sbjct: 309 SVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVS 368
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
GLI +K+S A ++ +M+ +G
Sbjct: 369 GLIKGRKVSDALEIFEEMLSRG 390
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G PD ++++ L+E R G + + ++ D + G PD Y +I + +
Sbjct: 284 SGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDE 343
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYP---------- 110
+ + M+++ P++ + + L++G K +VS+A++++EEM SRG P
Sbjct: 344 SMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLK 403
Query: 111 -------------------------DEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
E Y L+++ L K + VW +M E G+
Sbjct: 404 PLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPS 463
Query: 146 D 146
D
Sbjct: 464 D 464
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ +F L+ AK + + K I D Y +I K G++
Sbjct: 216 GVKCSTESFNALLRCLCERSHVSAAKSVFNA-KKGNIPFDSCSYNIMISGWSKLGEVEEM 274
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +MVE G PD +S + LI G ++ R+++++++++ ++ +G PD YN +I
Sbjct: 275 EKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICN 334
Query: 122 LIVEKKLSVASRVWGQMMEK 141
I + + R + +M+++
Sbjct: 335 FISARDFDESMRYYRRMLDE 354
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD+ TI +++F+R A +L ++ G+ + ++ LC+ + A
Sbjct: 181 GVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAA 240
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++F + + IP D S N +I+G+ K V E ++ +EM G PD ++Y+ +I G
Sbjct: 241 KSVF-NAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEG 299
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L +++ + ++ + KG
Sbjct: 300 LGRTGRINDSVEIFDNIKHKG 320
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 57/134 (42%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+LP T ++ G A + + K G Y ++ L + GK G+
Sbjct: 390 GVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGML 449
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M E G P DV +++G C + A+ + EE +G P+ Y+ +
Sbjct: 450 LNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSK 509
Query: 122 LIVEKKLSVASRVW 135
L+ K +A +++
Sbjct: 510 LMASNKTELAYKLF 523
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ DV ++++++ A R +L M G++PD T + + + A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F + G+ S NAL+ C+ VS A ++ + P+ D +YN++I G
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPF-DSCSYNIMISG 264
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
++ +V +M+E GF D
Sbjct: 265 WSKLGEVEEMEKVLKEMVESGFGPD 289
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G46100.1); Has
11639 Blast hits to 3936 proteins in 180 species: Archae
- 0; Bacteria - 2; Metazoa - 206; Fungi - 141; Plants -
11004; Viruses - 0; Other Eukaryotes - 286 (source: NCBI
BLink). | chr4:573098-577243 REVERSE
Length = 1110
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G++P+ ++ +L++AF IA +L +M + + PD Y +I C+ G++
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + DM+ +G PD LI G C E + EEM S+G P N +++
Sbjct: 244 AMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVK 299
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
G K+ A V +M+ G TL E++I
Sbjct: 300 GFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 333
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKM---GISPDRIFYTTIIGHLCKS-GKIGLAHTIF 65
FT L++ + + + +K+L KM +P I+ L G + A +F
Sbjct: 122 FTYLIKVY---AEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELF 178
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
G+ P+ S N L+ FC + +S A QL+ +M R PD +Y ++I+G +
Sbjct: 179 KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRK 238
Query: 126 KKLSVASRVWGQMMEKGFTLDR 147
+++ A + M+ KGF DR
Sbjct: 239 GQVNGAMELLDDMLNKGFVPDR 260
>AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29071983-29073428 REVERSE
Length = 481
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 35/171 (20%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG----- 59
PD T++IL+E + +E + A+++ +M G PD + Y+ ++ LCK+G++
Sbjct: 199 PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI 258
Query: 60 ------------------LAHT------------IFCDMVEQGIPPDVISCNALINGFCK 89
L HT F +M G+ DV N+LI FCK
Sbjct: 259 VRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 318
Query: 90 SFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMME 140
+ R+ ++ +EM+S+G P+ + N+I+R LI + A V+ +M++
Sbjct: 319 ANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK 369
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ DV F L+ AF + ++L +M G++P+ I+ HL + G+
Sbjct: 300 SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDE 359
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F M+ + PD + +I FC+ + A ++++ M+ +G +P T++++I
Sbjct: 360 AFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLIN 418
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
GL E+ A + +M+E G
Sbjct: 419 GLCEERTTQKACVLLEEMIEMG 440
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+ + I++ + G D A + +M K+ PD YT +I C+ ++ A
Sbjct: 336 GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETA 394
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ M ++G+ P + + + LING C+ +A L EEM G P VT+ + +
Sbjct: 395 DKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQL 454
Query: 122 LIVEKKLSV 130
LI E++ V
Sbjct: 455 LIKEEREDV 463
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P++V F L+ A + + A+++ + M + +PD Y+ ++ K + A +
Sbjct: 165 PNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREV 223
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F +M++ G PD+++ + +++ CK+ RV EA+ + M P Y++++
Sbjct: 224 FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGT 283
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
E +L A + +M G D A LI A
Sbjct: 284 ENRLEEAVDTFLEMERSGMKADVAVFNSLIGA 315
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 45 YTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQ 104
+ ++ ++ K+ A F M + +PP++++ N L++ CKS V +A +++E M+
Sbjct: 135 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR 194
Query: 105 SRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
R PD TY++++ G E L A V+ +M++ G D I++
Sbjct: 195 DRFT-PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMV 243
>AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9158380-9159897 FORWARD
Length = 505
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 13 LVEAFLREGSSDIAKKLLDQM-TKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQ 71
++E L++ D A K+ M +K G D FY +I LCK+G+I +A +F +M E+
Sbjct: 256 IMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRER 315
Query: 72 GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVA 131
G+ D ++ +LI G RV EA L E +++ PD Y+ +I+GL+ K+ S A
Sbjct: 316 GVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEA 371
Query: 132 SRVWGQMMEKG 142
+ V+ +M+++G
Sbjct: 372 TEVFRKMIQRG 382
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G L +V T VE +E + AK + ++ + I PD I Y T+I C G + A
Sbjct: 176 GYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEF-IKPDEITYRTMIQGFCDVGDLIEA 234
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS-RGPYPDEVTYNLIIR 120
++ M+++G D+ + ++ K + EA +++ M S RG D Y ++I
Sbjct: 235 AKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMID 294
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
L ++ +A +V+ +M E+G +D LI
Sbjct: 295 WLCKNGRIDMARKVFDEMRERGVYVDNLTWASLI 328
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKK---LLDQMTKMGISPDRIFYTTIIGHLCKSGKI 58
G+ PD T+ LV+ S+D+ K L++M + G D I Y +I K G++
Sbjct: 535 GVTPDKCTYNTLVQIL---ASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQL 591
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
+A ++ +MVE I PDV+ LIN F + V +AM E M+ G + V YN +
Sbjct: 592 NMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSL 651
Query: 119 IR 120
I+
Sbjct: 652 IK 653
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDVV + +L+ AF G+ A ++ M + GI + + Y ++I K G + A
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 63 TIFCDMVE---QGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
I+ +++ + PDV + N +IN + + V +A +++ M+ RG +E T+ +++
Sbjct: 666 AIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGE-ANEFTFAMML 724
Query: 120 RGLIVEKKLSVASRVWGQMME 140
+ A+++ QM E
Sbjct: 725 CMYKKNGRFEEATQIAKQMRE 745
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI+P VTF ++ + G L+ M K+ +PD Y +I K+ I A
Sbjct: 328 GIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERA 386
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F +M + G+ PD +S L+ F V EA L EM DE T + + R
Sbjct: 387 GAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTR- 445
Query: 122 LIVEKKLSVASRVW-------GQMMEKGFTLD 146
+ VE ++ S W G M +G++ +
Sbjct: 446 MYVEAEMLEKSWSWFKRFHVAGNMSSEGYSAN 477
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFC 66
V+ + ++++A+ S + A +L + M G++PD+ Y T++ L +
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 67 DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
M E G D I A+I+ F K +++ A ++Y+EM PD V Y ++I
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF 620
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P++ T+T LV AF REG + A+++ +Q+ + G+ PD Y ++ ++G A I
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M G PD S N +++ + ++ S+A ++EEM+ G P ++ L++
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 125 EKKLSVASRVWGQMMEKGFTLD 146
+ ++ + +M E G D
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPD 438
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 7 VVTFTILVEAFL-REGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
V + +E + R+G+++ A + +M + P Y +I K+ K ++ ++
Sbjct: 228 VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLY 287
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
C+M P++ + AL+N F + +A +++E++Q G PD YN ++
Sbjct: 288 CEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA 347
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
A+ ++ M G DRA+ I++ A R
Sbjct: 348 GYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P T+ +++ + + S ++ KL +M P+ YT ++ + G A I
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F + E G+ PDV NAL+ + ++ A +++ MQ G PD +YN+++
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
S A V+ +M G + +L+SA S+
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PDV + L+E++ R G A ++ M MG PDR Y ++ ++G
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F +M GI P + S L++ + K+ V++ + +EM G PD N ++
Sbjct: 388 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 447
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
+ + ++ +M T D + ILI+
Sbjct: 448 LYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 482
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P + + +L+ A+ + + ++ +M++ G+ PD +++ + G+
Sbjct: 399 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM 458
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I +M D+ + N LIN + K+ + +L+ E++ + PD VT+ I G
Sbjct: 459 EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI-G 517
Query: 122 LIVEKKLSVAS-RVWGQMMEKGFTLDRANSEILISANSRD 160
KKL V V+ +M++ G D +++L+SA S +
Sbjct: 518 AYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSE 557
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ PD ++ + R G +K+L +M + D Y +I K+G +
Sbjct: 433 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 492
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+F ++ E+ PDV++ + I + + + ++++EEM G PD T +++
Sbjct: 493 IEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 552
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTL 145
E+++ + V + M KG T+
Sbjct: 553 ACSSEEQVEQVTSVL-RTMHKGVTV 576
>AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30395194-30396921 REVERSE
Length = 540
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P + + LV RE D A KL+ ++ + G+ PD + Y ++I LC++GK+ +A
Sbjct: 324 GLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVA 383
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M+ + + P V + +A F ++ + +++ +M+ P E T+ LI+
Sbjct: 384 RNVLATMISENLSPTVDTFHA----FLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGK 439
Query: 122 LIVEKKLSVASRVWGQM 138
L K+ A ++W +M
Sbjct: 440 LFKGKQPENALKIWAEM 456
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
AK++ +M I+P++ Y+ +I K G + + ++ +M ++G+ P + N+L+
Sbjct: 278 AKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVY 337
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFT 144
+ EAM+L +++ G PD VTYN +IR L KL VA V M+ + +
Sbjct: 338 VLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLS 396
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+ +++ ++ F + G+ + +L D+M K G++P Y +++ L + A
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAM 349
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ + E+G+ PD ++ N++I C++ ++ A + M S P T++ + +
Sbjct: 350 KLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV 409
Query: 123 IVEKKLSVASRVWGQM 138
EK L V GQM
Sbjct: 410 NFEKTLEVL----GQM 421
>AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:566271-569865 FORWARD
Length = 1077
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P F ++V A + G D AK++L M G+ PD YT II K G + A
Sbjct: 903 GPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEA 962
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I + ++ ++ +ALI G+CK EA++L EM G P+ YN +I+
Sbjct: 963 QEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQS 1022
Query: 122 LIVEK-KLSVASRVWGQMMEKGFTLDRANSEILISA 156
++ A ++ +M +KG L+ A S+ LI A
Sbjct: 1023 FCLKALDWEKAEVLFEEMKQKGLHLN-AISQGLIRA 1057
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P F+ ++ + R + AK LL M G +P + ++ K+G + A
Sbjct: 872 GIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEA 927
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M +G+ PDV + +I+G+ K + EA ++ E + + VTY+ +IRG
Sbjct: 928 KEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRG 987
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMT----KMGISPDRIFYTTIIGHLCKSGKIG 59
LP T++ +G+ A+++L ++ + GI P ++ +I LC+ +
Sbjct: 835 LPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVK 890
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A + DM+ +G P N +++ K+ + EA ++ + M+SRG PD TY +II
Sbjct: 891 DAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVII 950
Query: 120 RG 121
G
Sbjct: 951 SG 952
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 3/161 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLD-QMTKMGISPDRIFYTTIIGHLCKS-GKI 58
+G+L + ++ F +EG ++ A + + TK P R F T+I LCK+ G I
Sbjct: 796 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPR-FVATLITALCKNDGTI 854
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A + D+ + + + +I+ C+ V +A L +M S+GP P +NL+
Sbjct: 855 TFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLV 914
Query: 119 IRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ L A V M +G D ++IS ++
Sbjct: 915 VHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAK 955
>AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) |
chr5:9605650-9609625 FORWARD
Length = 1038
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 65/119 (54%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+ T+T++V ++ ++G + A K +M +G P+ + Y+++I K+G A
Sbjct: 288 GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKA 347
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
++ DM QGI P +C +++ + K+ +A+ L+ +M+ DEV LIIR
Sbjct: 348 IGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIR 406
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G P VT +ILV A G A+ + + I D + Y T+I + ++GK+
Sbjct: 733 KGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQC 792
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A I+ M G+P + + N +I+ + + ++ +A++++ + G Y DE Y +I
Sbjct: 793 ASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIM 852
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
K+S A ++ +M +KG
Sbjct: 853 HYGKGGKMSEALSLFSEMQKKG 874
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 35 KMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVS 94
++ P + YT ++ + GKI +A F +M+E G PD ++C ++ + + R S
Sbjct: 181 QLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHS 240
Query: 95 EAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRV---WGQMMEKGFTLDRANSE 151
+ Y+ +Q R YN ++ L +K S +V W +M+E+G +
Sbjct: 241 AMLTFYKAVQERRILLSTSVYNFMLSSL---QKKSFHGKVIDLWLEMVEEGVPPNEFTYT 297
Query: 152 ILISANSR 159
+++S+ ++
Sbjct: 298 LVVSSYAK 305
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ + T+ ++ + R D A ++ + G+ D YT +I H K GK+
Sbjct: 803 SGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSE 862
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRV-SEAMQLYEEMQSRGPYPDEVTYNLII 119
A ++F +M ++GI P S N ++ C + R+ E +L + M+ G D TY +I
Sbjct: 863 ALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLI 921
Query: 120 RGLIVEKKLSVASRVWGQMMEKG 142
+ + + A + + EKG
Sbjct: 922 QVYAESSQFAEAEKTITLVKEKG 944
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P VV +TI++ + + G +A++ +M ++G PD + T++ + G+ T
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ + E+ I N +++ K + + L+ EM G P+E TY L++
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
+ A + +G+M GF + +IS
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVIS 336
>AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat
336) | chr1:22865326-22866552 REVERSE
Length = 408
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P+ +F +++ F E SD K+L M G++ Y I LCK K A
Sbjct: 217 GIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEA 276
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M+ G+ P+ ++ + LI+GFC EA +L++ M +RG PD Y +I
Sbjct: 277 KALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYY 336
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
L A + + MEK +
Sbjct: 337 LCKGGDFETALSLCKESMEKNW 358
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+ VT++ L+ F E + AKKL M G PD Y T+I +LCK G A
Sbjct: 287 GMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETA 346
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR 106
++ + +E+ P +L+NG K +V EA +L +++ +
Sbjct: 347 LSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 61/140 (43%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ V T+ I +++ + S AK LLD M G+ P+ + Y+ +I C A
Sbjct: 252 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 311
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F MV +G PD LI CK A+ L +E + P ++ G
Sbjct: 312 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 371
Query: 122 LIVEKKLSVASRVWGQMMEK 141
L + K+ A + GQ+ EK
Sbjct: 372 LAKDSKVEEAKELIGQVKEK 391
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD+ T+ +++ F GS+ + ++ +M + GI P+ + +I K
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M ++G+ V + N I CK + EA L + M S G P+ VTY+ +I G
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
E A +++ M+ +G D
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPD 326
>AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8034036-8035292 REVERSE
Length = 418
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N I PD +++ +L++++ G + A +++ M G+ I +TTI+G L K+G +
Sbjct: 168 NNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDE 227
Query: 61 AHTIFCDMVEQGIPPDVISCNA-LINGFCKS-FRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A +++ +MV +G D N L+N +S RV E M EEM S G PD V+YN +
Sbjct: 228 AESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELM---EEMSSVGLKPDTVSYNYL 284
Query: 119 IRGLIVEKKLSVASRVW 135
+ V+ +S A +V+
Sbjct: 285 MTAYCVKGMMSEAKKVY 301
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
+ L+ ++ R D A K+ ++M K+G + + ++ S +F +
Sbjct: 105 LSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFP 164
Query: 70 EQ--GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
++ I PD IS LI +C S + +AM++ +M+ +G + + I+ L
Sbjct: 165 QRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGL 224
Query: 128 LSVASRVWGQMMEKGFTLD 146
+ A +W +M+ KG LD
Sbjct: 225 VDEAESLWIEMVNKGCDLD 243
>AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:24737719-24739353 FORWARD
Length = 544
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
++ D + ++I+V A +EG A+K+ D+M + G S + YT + C+ G + A
Sbjct: 299 NMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEA 358
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ +M E G+ P + N LI GF + + ++ E M +RG P +N +++
Sbjct: 359 ERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKS 418
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ + ++ A+ + + ++KGF D LI
Sbjct: 419 VSKIENVNRANEILTKSIDKGFVPDEHTYSHLI 451
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ P TF L+ F R G + + + M G+ P + ++ + K +
Sbjct: 368 SGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNR 427
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ I +++G PD + + LI GF + + +A++L+ EM+ R P + +I
Sbjct: 428 ANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIV 487
Query: 121 GL 122
GL
Sbjct: 488 GL 489
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G V+T L+ + D+ ++ + I P+ I +I LCK G++
Sbjct: 194 GFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEV 253
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + + P VI +L+ + R+ E+M L + + + D + Y++++
Sbjct: 254 VDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYA 313
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANS 150
E L A +V+ +M+++GF+ ANS
Sbjct: 314 KAKEGDLVSARKVFDEMLQRGFS---ANS 339
>AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6090954-6092333 FORWARD
Length = 459
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTK-MGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
T ++E + + G D A +L + + K +G Y +++ LC A+ +
Sbjct: 148 TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRR 207
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
M+ +G+ PD + L+NG+C + ++ EA + +EM RG P +L+I GL+
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 128 LSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L A + +M + GF D ILI A S+
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAISK 299
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G +PD+ TF IL+EA + G + ++ K+G+ D Y T+I + K GKI A
Sbjct: 282 GFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA 341
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+ + VE G P +I G C++ +A + +M+ + P+ Y ++I
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI 399
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD T+ ILV + G A++ LD+M++ G +P +I L +G + A
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M + G PD+ + N LI KS V +++Y G D TY +I
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPA 331
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
+ K+ A R+ +E G
Sbjct: 332 VSKIGKIDEAFRLLNNCVEDG 352
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 60/134 (44%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
A L+ +M + G+ PD+ Y ++ C +GK+ A +M +G P + LI
Sbjct: 201 AYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIE 260
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
G + + A ++ +M G PD T+N++I + ++ ++ + G +
Sbjct: 261 GLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCV 320
Query: 146 DRANSEILISANSR 159
D + LI A S+
Sbjct: 321 DIDTYKTLIPAVSK 334
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P +L+E L G + AK+++ +MTK G PD + +I + KSG++
Sbjct: 247 GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFC 306
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ + G+ D+ + LI K ++ EA +L G P Y II+G
Sbjct: 307 IEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKG 366
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ A + M K +R +LI+ R
Sbjct: 367 MCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGR 404
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D+ T+ L+ A + G D A +LL+ + G P Y II +C++G A
Sbjct: 317 GLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDA 376
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ F DM + PP+ LI + + +A EM G P ++++ G
Sbjct: 377 FSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDG 436
Query: 122 LIVEKKLSVASRV 134
L K +A R+
Sbjct: 437 LKNGGKHDLAMRI 449
>AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17292479-17293717 REVERSE
Length = 412
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 10/134 (7%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N I+PD +++ IL++++ G+ + A +++ QM G+ I +TTI+ L K G++ +
Sbjct: 168 NKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEV 227
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSF--RVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A ++ +MV++G D + N I K RV E L EEM S G PD ++YN +
Sbjct: 228 ADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKE---LIEEMSSMGLKPDTISYNYL 284
Query: 119 I-----RGLIVEKK 127
+ RG++ E K
Sbjct: 285 MTAYCERGMLDEAK 298
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
++ L+ ++ + + A + +QM + G + + ++ S +F ++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 70 EQ--GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
++ I PD IS LI +C S +A+++ +MQ +G + + I+ L + +
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 128 LSVASRVWGQMMEKGFTLDRANSEILISANSRDA 161
L VA +W +M++KG LD A + I + +++
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKES 258
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD +++ L+ A+ G D AKK+ + + +P+ + T+I HLC S
Sbjct: 273 GLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQG 332
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGP 108
+ IF V PD + L+ G ++ + +A L ++ + P
Sbjct: 333 YAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFP 379
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 84/158 (53%), Gaps = 22/158 (13%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
++V++ +V+A ++ G D A L ++M + D + +T ++ L K+GK+ A +F
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLF 225
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M E+ I IS NA+I G+ ++ R+ EA QL++ M P D ++N +I G I
Sbjct: 226 DCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVM----PERDFASWNTMITGFIRN 277
Query: 126 KKLSVASRVWGQMMEK----------GFTLDRANSEIL 153
++++ A ++ +M EK G+ ++ N E L
Sbjct: 278 REMNKACGLFDRMPEKNVISWTTMITGYVENKENEEAL 315
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 78/133 (58%), Gaps = 11/133 (8%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DVVT+T ++ +++ G A++L D++ + + +T ++ +S ++ +A +F
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+M E+ +V+S N +I+G+ +S R+ +A++L++EM P + V++N +++ L+
Sbjct: 133 QEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQR 184
Query: 126 KKLSVASRVWGQM 138
++ A ++ +M
Sbjct: 185 GRIDEAMNLFERM 197
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 48 IIGHLCKSGKIGLAHTIFCDMVEQGIPP-DVISCNALINGFCKSFRVSEAMQLYEEMQSR 106
+IG LCK GKI A +F G+P DV++ +I G+ K + EA +L++ + SR
Sbjct: 52 LIGELCKVGKIAEARKLF-----DGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR 106
Query: 107 GPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKG 142
+ VT+ ++ G + K+LS+A ++ +M E+
Sbjct: 107 ---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERN 139
>AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1955959-1959051 FORWARD
Length = 1030
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
L D + I++ +LR+ A + + + K G P YT I+ HL K +
Sbjct: 395 LDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCN 454
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
+F +M+E GI PD ++ A++ G RV+EA +++ M+ +G P +Y++ ++ L
Sbjct: 455 LFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELC 514
Query: 124 VEKKLSVASRVWGQM 138
+ +++ QM
Sbjct: 515 RSSRYDEIIKIFNQM 529
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P V +T L+ F +E + + +M P + YT +I GK+ A
Sbjct: 884 GTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEA 943
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F +M E+G PD + + IN C++ + +A++L EM +G P + + + G
Sbjct: 944 WNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYG 1003
Query: 122 LIVEKKLSVA 131
L E K +A
Sbjct: 1004 LNREGKHDLA 1013
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
L D T+ +V L+ G A ++ M ++G P YT++I + K ++
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
M + P V++ A+I G+ +V EA + M+ RG PD TY+ I L
Sbjct: 911 TCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLC 970
Query: 124 VEKKLSVASRVWGQMMEKG 142
K A ++ +M++KG
Sbjct: 971 QACKSEDALKLLSEMLDKG 989
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTII-GHLCKSGKIG 59
+G P V T+T +++ + + L ++M + GI PD + T ++ GHL ++ ++
Sbjct: 427 SGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQN-RVA 485
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS 105
A +F M E+GI P S + + C+S R E ++++ +M +
Sbjct: 486 EAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHA 531
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 4/161 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLL--DQMTKMGISPDRIFYTTIIGHLCKSGKI 58
NG D+ T+TIL+ + + + I K LL ++M K G D Y +I LC +G+
Sbjct: 218 NGCDKDIRTWTILISVYGK--AKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRG 275
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
LA + +M+E+GI + + L++ KS +V + ++M + + +
Sbjct: 276 DLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYL 335
Query: 119 IRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
++ V K+ A + ++ K LD EIL+ R
Sbjct: 336 LKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCR 376
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 60/120 (50%)
Query: 35 KMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVS 94
K G S Y T++ ++ + + + +M + G D+ + LI+ + K+ ++
Sbjct: 182 KDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIG 241
Query: 95 EAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ + ++E+M+ G D YN++IR L + + +A + +MMEKG T ++L+
Sbjct: 242 KGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLL 301
>AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30285358-30286704 REVERSE
Length = 448
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P+V T +++ +G A ++LD+M K G PD I Y + L K +I
Sbjct: 289 GCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI--- 345
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++F M+ G+ P + + L+ F + + + +++ M+ G PD YN +I
Sbjct: 346 LSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDA 405
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDR 147
LI + L +A +M+E+G + R
Sbjct: 406 LIQKGMLDMAREYEEEMIERGLSPRR 431
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 3/141 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ D+ +++I ++ + G A KL +M + D + Y T+I + S +
Sbjct: 219 GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F +M E+G P+V + N +I C+ R+ +A ++ +EM RG PD +TY +
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSR 338
Query: 122 LIVEKKLSVASRVWGQMMEKG 142
L EK + S ++G+M+ G
Sbjct: 339 L--EKPSEILS-LFGRMIRSG 356
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%)
Query: 11 TILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVE 70
+++ + + G K+ +M G++ D Y+ + +CKSGK A ++ +M
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 71 QGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSV 130
+ + DV++ N +I S V ++++ EM+ RG P+ T+N II+ L + ++
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 131 ASRVWGQMMEKG 142
A R+ +M ++G
Sbjct: 313 AYRMLDEMPKRG 324
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMG----ISPDRIFYTTIIGHLCKSGKIG 59
L D +F LV+A A++L +G +S +I + I+ K G G
Sbjct: 148 LRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKI-HNLILRGWSKLGWWG 206
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+ M +G+ D+ S + ++ CKS + +A++LY+EM+SR D V YN +I
Sbjct: 207 KCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVI 266
Query: 120 RGLIVEKKLSVASRVWGQMMEKG 142
R + + + RV+ +M E+G
Sbjct: 267 RAIGASQGVEFGIRVFREMRERG 289
>AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: glutamine biosynthetic process; LOCATED IN:
nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G48730.1); Has
17188 Blast hits to 5538 proteins in 167 species: Archae
- 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants -
16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI
BLink). | chr3:19704729-19706417 REVERSE
Length = 497
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV TFT+L+ + G D+ K ++ +M+ +G+ + Y TII K+G ++
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 65 FCDMVEQGIP-PDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
DM+E G PDV + N++I + + + Y Q G PD T+N++I
Sbjct: 273 LADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILI 328
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 65/139 (46%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
VT+ I++E F + G + + +M G+ P+ I Y +++ K+G + ++
Sbjct: 357 VTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQ 416
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
+V + D N +IN + ++ ++ +LY +M+ R PD++T+ +I+
Sbjct: 417 IVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGI 476
Query: 128 LSVASRVWGQMMEKGFTLD 146
+ QM+ G LD
Sbjct: 477 FDAVQELEKQMISSGENLD 495
>AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6165449-6167515 FORWARD
Length = 688
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQM-TKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
PD T ++ + G D A K+LD M T +PD + T++ L G+ A
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 64 IFCD-MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ M E I P V++ NA+I G K + EAM ++ +++ D TY +II GL
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 123 IVEKKLSVASRVWGQMM 139
V K+ +A + W ++
Sbjct: 565 CVTNKVDMAKKFWDDVI 581
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ D T+ I+++ D+AKK D + D Y + LC+SG + A
Sbjct: 550 VTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDAC 609
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR-- 120
D+ + G P+V+ N +I +S EA Q+ EEM+ G PD VT+ ++ +
Sbjct: 610 HFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLH 669
Query: 121 ---GLIVEKKL 128
L VE++L
Sbjct: 670 DSMDLTVEREL 680
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 37/168 (22%)
Query: 24 DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNAL 83
D A ++LD + G PD + +++I LC +G+ AH F + G PD +CN +
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 84 I-------------------------------------NGFCKSFRVSEAMQLYEEMQSR 106
I N C +RV +A +L +M++R
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 107 GPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
G PD VT+ +I G ++L VA +V+ +M G + +LI
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI 239
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N I P VV + ++ + D A + Q+ K ++ D Y II LC + K+ +
Sbjct: 513 NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDM 572
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A + D++ D A + G C+S +S+A ++ G P+ V YN +I
Sbjct: 573 AKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVI 631
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQM-TKMGISPDRIFYTTIIGHLCKSGKIGLA 61
P T+ +L+E+ +E + A+ +L+ M K G RI+ + G LC
Sbjct: 373 FFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRG-LCVMDNPTEI 431
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY--PDEVTYNLII 119
+ M++ PD + N +ING CK RV +AM++ ++M + G + PD VT N ++
Sbjct: 432 LNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMT-GKFCAPDAVTLNTVM 490
Query: 120 RGLIVEKKLSVASRVWGQMM 139
GL+ + + A V ++M
Sbjct: 491 CGLLAQGRAEEALDVLNRVM 510
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMT--KMGISPDRIFYTTIIGHLCKSGKI 58
+G +PD T +++ L S ++ ++ K P Y ++ LC ++
Sbjct: 119 SGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRV 178
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
AH + DM +G PDV++ LI G+C+ + A ++++EM+ G P+ +T +++
Sbjct: 179 IDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVL 238
Query: 119 IRGLIVEKKLSVASRVWGQMME 140
I G + + + ++ ++ E
Sbjct: 239 IGGFLKMRDVETGRKLMKELWE 260
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 2/130 (1%)
Query: 29 LLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVE-QGIPPDVISCNALINGF 87
+L M + PD T+I LCK G++ A + DM+ + PD ++ N ++ G
Sbjct: 434 VLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGL 493
Query: 88 CKSFRVSEAMQLYEE-MQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
R EA+ + M P V YN +IRGL K A V+GQ+ + T D
Sbjct: 494 LAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTAD 553
Query: 147 RANSEILISA 156
I+I
Sbjct: 554 STTYAIIIDG 563
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 57/133 (42%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
F LV++ REG + ++ + M+ Y +I LC+ + A I M
Sbjct: 274 AFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIM 333
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
+G+ P S NA+I+G CK A QL EE +P E TY L++ L E
Sbjct: 334 KSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDT 393
Query: 129 SVASRVWGQMMEK 141
A V M+ K
Sbjct: 394 GKARNVLELMLRK 406
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G + DV+ LV+ + + G + A+K+ D + + D + ++I C++G G A
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKA 437
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYP-DEVTYNLIIR 120
+ +F M + + P++I+ N +I+G+ K+ EAM L++ M+ G + T+NLII
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 121 GLIVEKKLSVASRVWGQM 138
G I K A ++ +M
Sbjct: 498 GYIQNGKKDEALELFRKM 515
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+LPD F +++ G + K + + K+G+S +I+ K G++
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F M E+ DVI+ N+++ +C++ + EA++L +EM+ G P VT+N++I
Sbjct: 235 ATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
G K A + +M G T D +IS
Sbjct: 291 GYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISG 326
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DV+ + ++ A+ + G + A +L+ +M K GISP + + +IG + GK A +
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M GI DV + A+I+G + +A+ ++ +M G P+ VT +
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 126 KKLSVASRVWGQMMEKGFTLD 146
K ++ S V ++ GF D
Sbjct: 366 KVINQGSEVHSIAVKMGFIDD 386
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DV T+ ++ + + G A +L +M + P+ I + T+I K+G G A +F
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 66 CDMVEQG-IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
M + G + + + N +I G+ ++ + EA++L+ +MQ P+ VT
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
>AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: PTAC2 (PLASTID
TRANSCRIPTIONALLY ACTIVE2) (TAIR:AT1G74850.1); Has 17570
Blast hits to 5782 proteins in 175 species: Archae - 1;
Bacteria - 18; Metazoa - 305; Fungi - 261; Plants -
16266; Viruses - 0; Other Eukaryotes - 719 (source: NCBI
BLink). | chr1:3639908-3643974 FORWARD
Length = 664
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 79/153 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P+ V T L++ +++ G D +++LL ++ G + + + Y ++ L K+GK+ A
Sbjct: 302 GLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEA 361
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+IF DM +G+ D + + +I+ C+S R EA +L + ++ D V N ++
Sbjct: 362 RSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCA 421
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
++ R+ +M E+ + D ILI
Sbjct: 422 YCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NGI D V + ++ G S+ A+ + QM G SP+ Y++++ G
Sbjct: 231 NGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKK 290
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + +M G+ P+ + L+ + K + +L E++S G +E+ Y +++
Sbjct: 291 ADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMD 350
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
GL KL A ++ M KG D + I+ISA R
Sbjct: 351 GLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCR 389
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 66/133 (49%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P++ ++ L+ ++ +G A +L+ +M +G+ P+++ TT++ K G +
Sbjct: 267 GHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRS 326
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ ++ G + + L++G K+ ++ EA ++++M+ +G D +++I
Sbjct: 327 RELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISA 386
Query: 122 LIVEKKLSVASRV 134
L K+ A +
Sbjct: 387 LCRSKRFKEAKEL 399
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 1 NGILPDVVTFTILVEAFLR-EGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG 59
+G+ PDVVT+ L+ ++ + A +L+ ++ GI D + Y T++ +G+
Sbjct: 195 DGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSE 254
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A M +G P++ ++L+N + +A +L EM+S G P++V ++
Sbjct: 255 EAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLL 314
Query: 120 RGLI 123
+ I
Sbjct: 315 KVYI 318
>AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21824233 REVERSE
Length = 583
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 1 NGILPDVVTFTILVEAFLREG-----SSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKS 55
+G P +T+ I+++ F+ EG + ++ + LLD+ K + PD+ Y +I K+
Sbjct: 203 SGPEPSAITYQIILKTFV-EGDKFKEAEEVFETLLDE-KKSPLKPDQKMYHMMIYMYKKA 260
Query: 56 GKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY 115
G A +F MV +G+P ++ N+L++ F S++ E ++Y++MQ PD V+Y
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVTYNSLMS-FETSYK--EVSKIYDQMQRSDIQPDVVSY 317
Query: 116 NLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L+I+ ++ A V+ +M++ G IL+ A
Sbjct: 318 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDA 358
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDVV++ +L++A+ R + A + ++M G+ P Y ++ SG + A
Sbjct: 310 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
T+F M I PD+ S +++ + + + A + ++ ++ G P+ VTY +I+G
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
+ V+ +M G +AN IL +
Sbjct: 430 AKANDVEKMMEVYEKMRLSGI---KANQTILTT 459
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
+ F +L+ A+ + G+ + A+++L ++KMG +P+ I YT ++ + GK A IF
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM--QSRGPY-PDEVTYNLIIRGLIV 124
M G P I+ ++ F + + EA +++E + + + P PD+ Y+++I
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 125 EKKLSVASRVWGQMMEKG 142
A +V+ M+ KG
Sbjct: 260 AGNYEKARKVFSSMVGKG 277
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P + IL++AF G + AK + M + I PD YTT++ + + A
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 403
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F + G P++++ LI G+ K+ V + M++YE+M+ G ++ I+
Sbjct: 404 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 463
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS-ANSRD 160
K A + +M G D+ +L+S A+++D
Sbjct: 464 SGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQD 503
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ VT+ L+ +F E S K+ DQM + I PD + Y +I ++ + A
Sbjct: 277 GVPQSTVTYNSLM-SF--ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEA 333
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++F +M++ G+ P + N L++ F S V +A +++ M+ +PD +Y ++
Sbjct: 334 LSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 393
Query: 122 LIVEKKLSVASRVWGQMMEKGF 143
+ + A + + ++ GF
Sbjct: 394 YVNASDMEGAEKFFKRIKVDGF 415
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PD+ ++T ++ A++ + A+K ++ G P+ + Y T+I K+ +
Sbjct: 380 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 439
Query: 63 TIFCDMVEQGIPPDVISCNALIN--GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
++ M GI + +++ G CK+F A+ Y+EM+S G PD+ N+++
Sbjct: 440 EVYEKMRLSGIKANQTILTTIMDASGRCKNF--GSALGWYKEMESCGVPPDQKAKNVLLS 497
Query: 121 GLIVEKKLSVASRVWG 136
+ +L A + G
Sbjct: 498 LASTQDELEEAKELTG 513
>AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8947426-8949424 FORWARD
Length = 574
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G D + F ++ AF G+ + A + L +M ++G++P Y T+I +GK
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 61 AHTIFCDMVEQG---IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNL 117
+ + M+E+G + P++ + N L+ +CK +V EA ++ ++M+ G PD VTYN
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 118 I 118
I
Sbjct: 229 I 229
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFC 66
V + T L+ + G A+ + + + G P I YTT++ + + G +I
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 67 DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEK 126
++ + G D I NA+IN F +S + +A+Q +M+ G P TYN +I+G +
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 127 KLSVASRVWGQMMEKG 142
K +S + M+E+G
Sbjct: 165 KPERSSELLDLMLEEG 180
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD ++IL + ++R A++LL+ + + P+ + +TT+I C +G + A
Sbjct: 360 GVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWCSNGSMDDA 418
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
+F M + G+ P++ + L+ G+ + + +A ++ + M+ G P+ T+ L+
Sbjct: 419 MRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLL 475
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
++V F L+ F+ D ++L M + + D I Y+T++ +G + A +F
Sbjct: 294 NLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVF 353
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM--QSRGPYPDEVTYNLIIRGLI 123
+MV+ G+ PD + + L G+ ++ +A +L E + +SR P+ V + +I G
Sbjct: 354 KEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR---PNVVIFTTVISGWC 410
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ A RV+ +M + G + + E L+
Sbjct: 411 SNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DV+T++ ++ A+ G + A ++ +M K G+ PD Y+ + ++ + A +
Sbjct: 329 DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 388
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
++ + P+V+ +I+G+C + + +AM+++ +M G P+ T+ ++ G +
Sbjct: 389 ETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEV 447
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
K+ A V QMM +G + NS L+ A + A
Sbjct: 448 KQPWKAEEVL-QMM-RGCGVKPENSTFLLLAEAWRVA 482
>AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26805651-26807183 REVERSE
Length = 510
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
A+K+ D+M K PD YT ++ + + + +M ++G PDV++ +IN
Sbjct: 216 AQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIIN 275
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTL 145
CK+ + EA++ + EM+ R P + +I GL EKKL+ A + + GF L
Sbjct: 276 AHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPL 335
Query: 146 DRANSEILISA 156
+ L+ A
Sbjct: 336 EAPTYNALVGA 346
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PDVV + I++ A + + A + ++M + P + ++I L K+ A
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDA 321
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F G P + + NAL+ +C S R+ +A + +EM+ +G P+ TY++I+
Sbjct: 322 LEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHH 381
Query: 122 LIVEKKLSVASRVWGQM 138
LI ++ A V+ M
Sbjct: 382 LIRMQRSKEAYEVYQTM 398
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD+ ++TIL+E + +E + ++ +M G PD + Y II CK+ K A
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRF 289
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEV-TYNLIIRGLI 123
F +M ++ P +LING ++++A++ +E +S G +P E TYN ++
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSG-FPLEAPTYNALVGAYC 348
Query: 124 VEKKLSVASRVWGQMMEKG 142
+++ A + +M KG
Sbjct: 349 WSQRMEDAYKTVDEMRLKG 367
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G + T+ LV A+ + A K +D+M G+ P+ Y I+ HL + +
Sbjct: 331 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 390
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ ++ M P V + ++ FC R+ A+++++EM+ +G P ++ +I
Sbjct: 391 AYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLIT 447
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
L E KL A + +M++ G
Sbjct: 448 ALCHENKLDEACEYFNEMLDVG 469
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
TF ++ + R A +M + G + + ++ L KS +G A +F M
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
++ PD+ S L+ G+ + + ++ EM+ G PD V Y +II KK
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 129 SVASRVWGQMMEKG 142
A R + +M ++
Sbjct: 284 EEAIRFFNEMEQRN 297
>AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21823919 REVERSE
Length = 590
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 1 NGILPDVVTFTILVEAFLREG-----SSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKS 55
+G P +T+ I+++ F+ EG + ++ + LLD+ K + PD+ Y +I K+
Sbjct: 210 SGPEPSAITYQIILKTFV-EGDKFKEAEEVFETLLDE-KKSPLKPDQKMYHMMIYMYKKA 267
Query: 56 GKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY 115
G A +F MV +G+P ++ N+L++ F S++ E ++Y++MQ PD V+Y
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVTYNSLMS-FETSYK--EVSKIYDQMQRSDIQPDVVSY 324
Query: 116 NLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L+I+ ++ A V+ +M++ G IL+ A
Sbjct: 325 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDA 365
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PDVV++ +L++A+ R + A + ++M G+ P Y ++ SG + A
Sbjct: 317 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 376
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
T+F M I PD+ S +++ + + + A + ++ ++ G P+ VTY +I+G
Sbjct: 377 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 436
Query: 123 IVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
+ V+ +M G +AN IL +
Sbjct: 437 AKANDVEKMMEVYEKMRLSGI---KANQTILTT 466
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
+ F +L+ A+ + G+ + A+++L ++KMG +P+ I YT ++ + GK A IF
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEM--QSRGPY-PDEVTYNLIIRGLIV 124
M G P I+ ++ F + + EA +++E + + + P PD+ Y+++I
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 125 EKKLSVASRVWGQMMEKG 142
A +V+ M+ KG
Sbjct: 267 AGNYEKARKVFSSMVGKG 284
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P + IL++AF G + AK + M + I PD YTT++ + + A
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 410
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
F + G P++++ LI G+ K+ V + M++YE+M+ G ++ I+
Sbjct: 411 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 470
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS-ANSRD 160
K A + +M G D+ +L+S A+++D
Sbjct: 471 SGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQD 510
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G+ VT+ L+ E S K+ DQM + I PD + Y +I ++ +
Sbjct: 283 KGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEE 339
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++F +M++ G+ P + N L++ F S V +A +++ M+ +PD +Y ++
Sbjct: 340 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 399
Query: 121 GLIVEKKLSVASRVWGQMMEKGF 143
+ + A + + ++ GF
Sbjct: 400 AYVNASDMEGAEKFFKRIKVDGF 422
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PD+ ++T ++ A++ + A+K ++ G P+ + Y T+I K+ +
Sbjct: 387 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 446
Query: 63 TIFCDMVEQGIPPDVISCNALIN--GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
++ M GI + +++ G CK+F A+ Y+EM+S G PD+ N+++
Sbjct: 447 EVYEKMRLSGIKANQTILTTIMDASGRCKNF--GSALGWYKEMESCGVPPDQKAKNVLLS 504
Query: 121 GLIVEKKLSVASRVWG 136
+ +L A + G
Sbjct: 505 LASTQDELEEAKELTG 520
>AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006) |
chr5:20459238-20461504 FORWARD
Length = 723
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI P V T+T +++AF R G + ++ M + I RI Y T++ K G A
Sbjct: 515 GIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEA 574
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ + + G+ P V++ N L+N + + + ++ QL +EM + PD +TY+ +I
Sbjct: 575 RDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYA 634
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEIL 153
+ + A M++ G D + E L
Sbjct: 635 FVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 2 GILPDVVTFTILVEAFLR-EGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G+ P+V ++T L+ A+ R + SD+A +M K+G+ P YT +I SG
Sbjct: 444 GLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEK 503
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A+ F +M ++GI P V + ++++ F +S + M++++ M +TYN ++
Sbjct: 504 AYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLD 563
Query: 121 GL 122
G
Sbjct: 564 GF 565
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P ++T L+ A+ G + A ++M K GI P YT+++ +SG G
Sbjct: 480 GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKL 539
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
I+ M+ + I I+ N L++GF K EA + E G P +TYN+++
Sbjct: 540 MEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLM 597
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 2 GILPDVVTFTILVEAFLREG-SSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+ PD VT IL+ + G S+ ++ ++M++ G+ + + ++ C G
Sbjct: 303 NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEE 362
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A I +M ++GI + I N L++ + KS + E L+ EM+ +G P TYN+++
Sbjct: 363 ALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMD 422
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ + + +M + G + + LISA R
Sbjct: 423 AYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGR 461
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 10 FTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMV 69
F LV++F EG + A + +M K GI + I Y T++ KS I +F +M
Sbjct: 347 FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR 406
Query: 70 EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 129
++G+ P + N L++ + + + L EM+ G P+ +Y +I KK+S
Sbjct: 407 DKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMS 466
Query: 130 -VASRVWGQMMEKGFTLDRANSEILISANS 158
+A+ + +M + G + LI A S
Sbjct: 467 DMAADAFLRMKKVGLKPSSHSYTALIHAYS 496
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 1/155 (0%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL-AHTI 64
DV + + D A ++ + M K+ + PD + +I L K+G+ I
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M E+G+ L+ FC EA+ + EM+ +G + + YN ++
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ ++ +M +KG A IL+ A +R
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYAR 426
>AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:172256-174137 FORWARD
Length = 577
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G D T+T +++ F G + M + G+ D + YT++I + SG + A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M + G P V+S A + RV EA ++Y+EM P+ TY +++
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
L+ K A ++ +M E G D+A ILI+
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNILIA 270
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+L D VT+T L+ G D A +L ++M G P + YT + L G++ A
Sbjct: 152 GVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEA 211
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
++ +M+ + P+ + L+ + + EA+ ++ +MQ G PD+ N++I
Sbjct: 212 TEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAK 271
Query: 122 LIVEKKLSVASRVWGQMMEKGFTL 145
+ + S +RV M E G L
Sbjct: 272 ALKFGETSFMTRVLVYMKENGVVL 295
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P VV++T ++ +G + A ++ +M + +SP+ YT ++ +L +GK
Sbjct: 186 NGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEE 245
Query: 61 AHTIFCDMVEQGIPPDVISCNALI 84
A IF M E G+ PD +CN LI
Sbjct: 246 ALDIFFKMQEIGVQPDKAACNILI 269
>AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24672008-24673471 REVERSE
Length = 487
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCK-------SGKIGLAHTIFCDMVEQGIPPDVI 78
A++++ M GI+PD + +++ LC+ SG + A I +M I P +
Sbjct: 227 ARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSM 286
Query: 79 SCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQM 138
S N L++ ++ RV E+ Q+ E+M+ G PD +Y ++R L + + +++ +M
Sbjct: 287 SYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEM 346
Query: 139 MEKGFTLDR 147
+E+GF +R
Sbjct: 347 IERGFRPER 355
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P +++ IL+ R + ++L+QM + G PD Y ++ L +G+ G +
Sbjct: 281 IQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGN 340
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQ--SRGPYPDEVTYNLIIR 120
I +M+E+G P+ LI C RV+ A+QL+E+M+ S G Y Y+L+I
Sbjct: 341 QIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQ--VYDLLIP 398
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTL 145
L +W + + TL
Sbjct: 399 KLCKGGNFEKGRELWEEALSIDVTL 423
>AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17870064-17871929 REVERSE
Length = 621
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 24 DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNAL 83
D+ ++ + G S + Y I L G+ A I M G PD I+ + L
Sbjct: 352 DLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQL 411
Query: 84 INGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
+ G CK+ R+ EA + ++M+++G +PD T+ ++I+G +L A + M+EKGF
Sbjct: 412 VFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGF 471
Query: 144 TLDRANSEILI 154
+D ++LI
Sbjct: 472 DIDSNLLDVLI 482
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%)
Query: 21 GSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISC 80
G D A+++ M G PD I Y+ ++ LCK+ ++ A + M QG PD+ +
Sbjct: 384 GRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 81 NALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVAS 132
LI G CK+ + +A+ + M +G D +++I G ++ K AS
Sbjct: 444 TILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGAS 495
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD +T++ LV + + A+ +LDQM G PD +T +I CK+ ++ A
Sbjct: 400 GYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKA 459
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEA-MQLYEEMQSRGPYPDEVTYNLIIR 120
F +M+E+G D + LI+GF + A + L E +++ P + TY L+I
Sbjct: 460 LACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLID 519
Query: 121 GLIVEKKLSVASRVWGQMMEK 141
L+ KK A + QMM+K
Sbjct: 520 KLLKIKKSEEALDLL-QMMKK 539
>AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22704630-22706126 REVERSE
Length = 498
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
A++L D+++K G++PD Y ++ L K G + A + +M E+GI PD ++ +++
Sbjct: 299 ARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFI 358
Query: 86 GFCKS--FRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
G KS F + + Y++M+ R P T ++++ ++++ +W M+EKG+
Sbjct: 359 GMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGY 418
Query: 144 TLDRANSEILISA 156
E+L +A
Sbjct: 419 CPHGHALELLTTA 431
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 62/142 (43%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV T IL+ F G + +M K G P+ + Y I CK G A +
Sbjct: 208 PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRL 267
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F DM V LI+G + +A QL++E+ RG PD YN ++ L+
Sbjct: 268 FEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMK 327
Query: 125 EKKLSVASRVWGQMMEKGFTLD 146
+S A +V +M EKG D
Sbjct: 328 CGDVSGAIKVMKEMEEKGIEPD 349
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRI-FYTTIIGHLCKSGKIGL 60
G+ PD + L+ + ++ G A K++ +M + GI PD + F++ IG + KS + G
Sbjct: 310 GLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIG-MMKSKEFGF 368
Query: 61 AHT--IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
+ M E+ + P + L+ FC + V+ + L++ M +G P L+
Sbjct: 369 NGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELL 428
Query: 119 IRGLIVEKKLSVASRVWGQMMEKG 142
L ++ + A Q +E+G
Sbjct: 429 TTALCARRRANDAFECSWQTVERG 452
>AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885), Smr protein/MutS2 C-terminal
(InterPro:IPR002625); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46580.1); Has 19821 Blast hits to 5782
proteins in 183 species: Archae - 2; Bacteria - 24;
Metazoa - 276; Fungi - 350; Plants - 18437; Viruses - 0;
Other Eukaryotes - 732 (source: NCBI BLink). |
chr4:9257985-9260093 FORWARD
Length = 702
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD TFT ++ + G A + ++M+ G PD + +I ++G + +A
Sbjct: 205 GIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMA 264
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+++ + D ++ + LI + S + +YEEM++ G P+ V YN +I
Sbjct: 265 LSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDS 324
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ K+ A ++ ++ GFT + + L+ A R
Sbjct: 325 MGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGR 362
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G PD VT +++A+ R G+ D+A L D+ D + ++T+I SG
Sbjct: 240 GCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGC 299
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
I+ +M G+ P+++ N LI+ ++ R +A +Y+++ + G P+ TY ++R
Sbjct: 300 LNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRA 359
Query: 122 LIVEKKLSVASRVWGQMMEKGFTL 145
+ A ++ +M EKG +L
Sbjct: 360 YGRARYGDDALAIYREMKEKGLSL 383
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+V+ + + ++ F + + ++KL D+M + GI PD +TTII ++G A F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
M G PD ++ A+I+ + ++ V A+ LY+ ++ D VT++ +IR
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 59/114 (51%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D VTF+ L+ + G+ D + ++M +G+ P+ + Y +I + ++ + A I+
Sbjct: 279 DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIY 338
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
D++ G P+ + AL+ + ++ +A+ +Y EM+ +G + YN ++
Sbjct: 339 KDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL 392
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P+ T+ LV A+ R D A + +M + G+S I Y T++ + +
Sbjct: 344 NGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDE 403
Query: 61 AHTIFCDMVE-QGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A IF DM + PD + ++LI + S RVSEA +M+ G P +I
Sbjct: 404 AFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVI 463
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLD 146
+ K++ R + Q++E G T D
Sbjct: 464 QCYGKAKQVDDVVRTFDQVLELGITPD 490
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+V + +++ + + GS AKK+ D + D I + T++ +SG G A +F
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDST----VEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
M +G+PP+VI+ N +I ++ +V EA ++ +MQS G P+ +++ ++ G++
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMV 522
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D++ + L+ A+ G S A +L M G+ P+ I + II L ++G++ A +F
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPD 111
M GI P++IS ++NG ++ EA+ +MQ G P+
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+V+T+ +++ + LR G D AK + QM GI P+ I +TT++ + ++G A
Sbjct: 471 GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEA 530
Query: 62 HTIFCDMVEQGIPPDVIS 79
M E G+ P+ S
Sbjct: 531 ILFLRKMQESGLRPNAFS 548
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 4 LPD--VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
+PD V + L+ +++ G ++ A +L M K G+ P R+ +T + G +
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ G+ D I +L+N +CK + A +++ M + D VT+NLII G
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISG 349
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+ + + A + M + D L+SA +R
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
>AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ + + +L++ +E + A+ +L Q+ K I+P+ + I CK+ ++ A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+M G P VIS +I +C+ F + ++ EM++ G P+ +TY I+
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L +K+ A RV +M G D LI +R
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+ TF I + + + + A + +M G P I YTTII C+ + +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M G PP+ I+ +++ EA+++ M+ G PD + YN +I L
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 123 IVEKKLSVASRVWG-QMMEKGFTLDRANSEILIS 155
+L A RV+ +M E G +++ + +I+
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P+ +T+T ++ + + + A ++ +M + G PD +FY +I L ++G++
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 61 AHTIF-CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG-PYPDEVTYNLI 118
A +F +M E G+ + + N++I +C +A++L +EM+S PD TY +
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPL 407
Query: 119 IRGLIVEKKLSVASRVWGQMMEK-GFTLDRANSEILI 154
+R + ++ +M+ K +LD + LI
Sbjct: 408 LRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLI 444
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G P V+++T ++ + ++ ++L +M G P+ I YTTI+ L +
Sbjct: 253 HGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEE 312
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYE-EMQSRGPYPDEVTYNLII 119
A + M G PD + N LI+ ++ R+ EA +++ EM G + TYN +I
Sbjct: 313 ALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMI 372
>AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ + + +L++ +E + A+ +L Q+ K I+P+ + I CK+ ++ A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+M G P VIS +I +C+ F + ++ EM++ G P+ +TY I+
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L +K+ A RV +M G D LI +R
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P+ TF I + + + + A + +M G P I YTTII C+ + +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ +M G PP+ I+ +++ EA+++ M+ G PD + YN +I L
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 123 IVEKKLSVASRVWG-QMMEKGFTLDRANSEILIS 155
+L A RV+ +M E G +++ + +I+
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG P+ +T+T ++ + + + A ++ +M + G PD +FY +I L ++G++
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 61 AHTIF-CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG-PYPDEVTYNLI 118
A +F +M E G+ + + N++I +C +A++L +EM+S PD TY +
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPL 407
Query: 119 IRGLIVEKKLSVASRVWGQMMEK-GFTLDRANSEILI 154
+R + ++ +M+ K +LD + LI
Sbjct: 408 LRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLI 444
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G P V+++T ++ + ++ ++L +M G P+ I YTTI+ L +
Sbjct: 253 HGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEE 312
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYE-EMQSRGPYPDEVTYNLII 119
A + M G PD + N LI+ ++ R+ EA +++ EM G + TYN +I
Sbjct: 313 ALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMI 372
>AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3913168-3914385 REVERSE
Length = 405
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I P +F ++++ F +E D +K++ M + G+ Y +I LCK K A
Sbjct: 213 IKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAK 272
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ ++ + P+ ++ + LI+GFC + EAM L+E M G PD Y +I L
Sbjct: 273 ALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCL 332
Query: 123 IVEKKLSVASRVWGQMMEKGF 143
A + + MEK +
Sbjct: 333 CKGGDFETALILCRESMEKNW 353
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+ VT+++L+ F E + D A L + M G PD Y T+I LCK G A +
Sbjct: 285 PNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALIL 344
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQL 99
+ +E+ P L+NG +V EA +L
Sbjct: 345 CRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKEL 379
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD+ T+ ++ GS+ + ++ +M + I P + +I K K
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ M E G+ V + N +I CK + +EA L + + S P+ VTY+L+I G
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
E+ L A ++ M+ G+ D
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPD 321
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ V T+ I+++ + S AK L+D + + P+ + Y+ +I C + A
Sbjct: 247 GVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEA 306
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F MV G PD LI+ CK A+ L E + P ++ G
Sbjct: 307 MNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNG 366
Query: 122 LIVEKKLSVASRVWGQMMEK 141
L K+ A + + EK
Sbjct: 367 LASRSKVDEAKELIAVVKEK 386
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKS-GKIGLAHTIFCD 67
TF L++ + + G + A L +M K G+ D + + T+I H C + G + A ++
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMI-HTCGTHGHLSEAESLLKK 365
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
M E+GI PD + N L++ + + A++ Y +++ G +PD VT+ ++ L K
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 128 LSVASRVWGQMMEKGFTLDRANSEILI 154
++ V +M +D + +++
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIM 452
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G DV+ + ++++A+ + + A L M G PD Y ++ L +
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A I +M++ G P + A+I + + +S+A+ LYE M+ G P+EV Y +I
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
G + A + + M E G + LI A S+
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSK 667
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
G PD T+ L + D A+++L +M G P Y +I + G +
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A ++ M + G+ P+ + +LINGF +S V EA+Q + M+ G + + +I+
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIK 663
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
L A RV+ +M + D A S ++S
Sbjct: 664 AYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS 698
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G P T+ ++ +++R G A L + M K G+ P+ + Y ++I +SG +
Sbjct: 579 SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEE 638
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A F M E G+ + I +LI + K + EA ++Y++M+ PD N ++
Sbjct: 639 AIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS 698
Query: 121 GLIVEKKLSVASRVWGQMMEKG 142
+S A ++ + EKG
Sbjct: 699 LCADLGIVSEAESIFNALREKG 720
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ D VTF ++ G A+ LL +M + GISPD Y ++ +G I
Sbjct: 334 SGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEA 393
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + + + G+ PD ++ A+++ C+ V+E + EM DE + +I++
Sbjct: 394 ALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQ 453
Query: 121 -----GLIVEKK 127
GL+V+ K
Sbjct: 454 MYVNEGLVVQAK 465
>AT5G03560.2 | Symbols: | nucleobase:cation symporter |
chr5:901452-902719 REVERSE
Length = 363
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL-AH 62
+PDVV T +VEA+ G + K+ +M G+SP+ Y+ +I L GK A
Sbjct: 229 MPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAK 288
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDE 112
+M+ G+ P+ + A+ F + + A +L +EM+ +G PDE
Sbjct: 289 KYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDE 338
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
+ +A ++G + A +L Q+ PD + +T I+ +G+ +F M+ G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYE-EMQSRGPYPDEVTYNLIIRGLIVEKKLSVA 131
+ P+ + + LI G + + + Y EM G P+ TY + + E K A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 132 SRVWGQMMEKGFTLD 146
+ +M KGF D
Sbjct: 323 RELLQEMKGKGFVPD 337
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE
Length = 580
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P V+ + +L++ ++ S A LLD+M ++ + PDR+ Y T+I K G + A
Sbjct: 188 PSVLIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKF 247
Query: 65 FCDMVEQG-------IPPDVISCNALINGFCKSFRVSEAMQLYEEMQ-SRGPYPDEVTYN 116
F DM E+ + PDV++ L+ GF + + +++ EM+ + D +
Sbjct: 248 FNDMKEKAEEYYDDFLQPDVVTYTTLVKGFGDATDLLSLQEIFLEMKLCENVFIDRTAFT 307
Query: 117 LIIRGLIVEKKLSVASRVWGQMMEK 141
++ ++ S A V+G+++++
Sbjct: 308 AVVDAMLKCGSTSGALCVFGEILKR 332
>AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4962293-4965976 FORWARD
Length = 1227
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 21 GSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISC 80
G+ DIA LL+ M K P Y ++I L + ++ A +MVE G+ P + +
Sbjct: 1062 GNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTW 1121
Query: 81 NALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMME 140
+ L++ FC++ +V E+ +L + M G P + + +I VEK AS + M +
Sbjct: 1122 SGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQK 1181
Query: 141 KGFTLDRANSEILIS--ANSRDAAST 164
G+ +D LIS ++S++ +T
Sbjct: 1182 CGYEVDFETHWSLISNMSSSKEKKTT 1207
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PDV ++ + R S+ A ++++ +G D + + +IG C G I A
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+++ +G PDV S NA+++G + + +EM+ G T+ +++ G
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 125 EKKLSVASRVWGQMMEKGF 143
++ A R+ +M G
Sbjct: 441 ARQFEEAKRIVNKMFGYGL 459
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G D VTF IL+ EG A L ++ G PD Y I+ L + G
Sbjct: 353 GFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHT 412
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG 107
H I +M E G+ + + ++ G+CK+ + EA ++ +M G
Sbjct: 413 HCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYG 458
>AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17901211-17902119 REVERSE
Length = 302
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 20 EGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVIS 79
E S +I KK M + G+ P+ + ++ LCK G + A +F M ++G P+V+
Sbjct: 116 EDSDEIFKK----MKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVI 168
Query: 80 CNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMM 139
A++ FCK+ ++ +A +++ +MQ+ G P+ +Y ++++GL L A +M+
Sbjct: 169 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEML 228
Query: 140 EKGFT 144
E G +
Sbjct: 229 ESGHS 233
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P+ V +++ ++G A KL M G P+ + YT ++ CK+ KI A
Sbjct: 129 GLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF M GI P+ S L+ G + +A+ EM G P+ T+ ++
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDA 245
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L K + A + +KGF ++
Sbjct: 246 LCRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
IF M E G+ P+ + A+++G CK V EAM+L+ M+ +G P+ V Y ++
Sbjct: 121 IFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K+ A R++ +M G + + +L+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLV 208
>AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17901211-17902119 REVERSE
Length = 302
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 20 EGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVIS 79
E S +I KK M + G+ P+ + ++ LCK G + A +F M ++G P+V+
Sbjct: 116 EDSDEIFKK----MKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVI 168
Query: 80 CNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMM 139
A++ FCK+ ++ +A +++ +MQ+ G P+ +Y ++++GL L A +M+
Sbjct: 169 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEML 228
Query: 140 EKGFT 144
E G +
Sbjct: 229 ESGHS 233
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G++P+ V +++ ++G A KL M G P+ + YT ++ CK+ KI A
Sbjct: 129 GLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
IF M GI P+ S L+ G + +A+ EM G P+ T+ ++
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDA 245
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L K + A + +KGF ++
Sbjct: 246 LCRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
IF M E G+ P+ + A+++G CK V EAM+L+ M+ +G P+ V Y ++
Sbjct: 121 IFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 124 VEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
K+ A R++ +M G + + +L+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLV 208
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Query: 4 LPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHT 63
+ DVV + +++ F++ G A++L D+MT + I +TT+I C I A
Sbjct: 173 VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV----ITWTTMIHGYCNIKDIDAARK 228
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY-PDEVT 114
+F M E+ +++S N +I G+C++ + E ++L++EMQ+ PD+VT
Sbjct: 229 LFDAMPER----NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVT 276
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
V++T L+ ++R G D+A KL DQM + D + Y ++ KSG + A +F +
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFDE 201
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
M + VI+ +I+G+C + A +L++ M P + V++N +I G K+
Sbjct: 202 MTHK----TVITWTTMIHGYCNIKDIDAARKLFDAM----PERNLVSWNTMIGGYCQNKQ 253
Query: 128 LSVASRVWGQMMEKGFTLDRANSEIL 153
R++ Q M+ +LD + IL
Sbjct: 254 PQEGIRLF-QEMQATTSLDPDDVTIL 278
>AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4445461-4447290 FORWARD
Length = 609
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
VT+ I + A+ R + A+ L D+M K G + Y+ I+ K+ ++ A +
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
M ++G P++ N+LI+ ++ + A ++++EM+ PD+V+Y +I K+
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 128 LSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L ++ + +DRA + I++ S+
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSK 540
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG 72
+V F ++ A K+ + K ++ Y I C+ K A +F +MV++G
Sbjct: 359 IVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG 418
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVAS 132
V++ + +++ + K+ R+S+A++L +M+ RG P+ YN +I L A
Sbjct: 419 FDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAE 478
Query: 133 RVWGQMMEKGFTLDRANSEILISANSR 159
++W +M D+ + +ISA +R
Sbjct: 479 KIWKEMKRAKVLPDKVSYTSMISAYNR 505
>AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);
binding | chr1:3363535-3366276 FORWARD
Length = 913
Score = 59.7 bits (143), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 14 VEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQG- 72
V++ +R D A KL Q P II + ++ + + ++F +Q
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 73 IPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPY-PDEVTYNLIIRGLIVEKKLSVA 131
I P+V+S N +IN C V EA+++Y + + P+ P VTY + +GL+ ++ A
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 132 SRVWGQMMEKGFTLD 146
+ + +M+ KG D
Sbjct: 272 ASLLREMLSKGQAAD 286
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQ-MTKMGISPDRIFYTTIIGHLCKSGKIG 59
+ I+P+VV++ ++ A EG+ D A ++ + +P + Y + L ++G+IG
Sbjct: 210 SNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIG 269
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR 106
A ++ +M+ +G D N LI G+ +A++ ++E++S+
Sbjct: 270 DAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK 316
>AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4013166-4014630 REVERSE
Length = 367
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTK-MGISPDRIFYTTIIGHLCKSGKIGLAHT 63
PDV+T+ +++ R G + +L M + +S + I Y T++ + K+ + +
Sbjct: 210 PDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLV 269
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
I+ +MV+ GI PD++S A+I+ +S V E+++L++EM+ R P Y +I L
Sbjct: 270 IYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCL 328
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+++T+ ++ + D+ + ++M + GI PD + YT +I L +SG + + +F
Sbjct: 247 NIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLF 306
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQS 105
+M ++ I P V ALI+ KS A+QL +E+++
Sbjct: 307 DEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKN 346
>AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G27800.1); Has 13348 Blast hits to 4225
proteins in 143 species: Archae - 3; Bacteria - 6;
Metazoa - 114; Fungi - 126; Plants - 12736; Viruses - 0;
Other Eukaryotes - 363 (source: NCBI BLink). |
chr3:9180348-9181487 FORWARD
Length = 379
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 27 KKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALING 86
+ L QM G+ PD II K ++ A +F +M G P+ + + L+ G
Sbjct: 208 RSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKG 267
Query: 87 FCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLD 146
C+ RV + + Y+EMQ +G P+ Y ++I L +E++L A V M+ + D
Sbjct: 268 VCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPD 327
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 62/122 (50%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG++PD ++++A+ + D A ++ +M G P+ Y+ ++ +C+ G++G
Sbjct: 217 NGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQ 276
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ +M +G+ P+ LI R+ EA+++ +M + PD +TYN ++
Sbjct: 277 GLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLT 336
Query: 121 GL 122
L
Sbjct: 337 EL 338
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
N I P+ TF+I++ RE + + +++ M KMG+ + ++ K +I
Sbjct: 154 NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISD 213
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F E + P+ + L +G+ K+ EA+ ++E M+ G PD + + +I
Sbjct: 214 ARRVF----EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 269
Query: 121 GLIVEKKLSVASRVWGQM 138
I KL A ++G+M
Sbjct: 270 TYIRLGKLKDARLLFGEM 287
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 35 KMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVS 94
K G+ D +++I K G I A +F + E V+S NALI G+ ++ +
Sbjct: 557 KCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS----VVSMNALIAGYSQN-NLE 611
Query: 95 EAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFT 144
EA+ L++EM +RG P E+T+ I+ + L++ ++ GQ+ ++GF+
Sbjct: 612 EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFS 661
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFY-TTIIGHLCKSGKIGL 60
G+ P +TF +VEA + S + + Q+TK G S + + +++G S +
Sbjct: 624 GVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTE 683
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F ++ P ++ +++G ++ EA++ Y+EM+ G PD+ T+ ++R
Sbjct: 684 ACALFSELSS---PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLR 740
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
V L + + LD S LI
Sbjct: 741 VCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLI 774
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 1 NGILPDVVTF-TIL----VEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKS 55
+G+LPD TF T+L V + LREG + + + + D + T+I K
Sbjct: 726 DGVLPDQATFVTVLRVCSVLSSLREG-----RAIHSLIFHLAHDLDELTSNTLIDMYAKC 780
Query: 56 GKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY 115
G + + +F +M + +V+S N+LING+ K+ +A+++++ M+ PDE+T+
Sbjct: 781 GDMKGSSQVFDEMRRR---SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 837
Query: 116 NLIIRGLIVEKKLSVASRVWGQMM 139
++ K+S +++ M+
Sbjct: 838 LGVLTACSHAGKVSDGRKIFEMMI 861
>AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G27300.1); Has 11283 Blast hits to 3897
proteins in 129 species: Archae - 1; Bacteria - 2;
Metazoa - 118; Fungi - 74; Plants - 10832; Viruses - 0;
Other Eukaryotes - 256 (source: NCBI BLink). |
chr2:11849789-11851351 REVERSE
Length = 442
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKM-GISPDRIFYTTIIGHLCKSGKIG 59
+GI PDV LV+ ++ + A ++ QM+ + P+ Y +I LC G+
Sbjct: 282 SGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTI 341
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A + +M +G P+ S N+L+N F S + +A++ EM G D ++Y ++
Sbjct: 342 NARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLV 401
Query: 120 RGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRD 160
+ K A+R+ + EK +DR + + L++ +D
Sbjct: 402 DESCRKGKYDEATRLLEMLREKQL-VDRDSYDKLVNVLHKD 441
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQ-SRGPYPDEVTYNLIIRG 121
++F MV+ GI PDV + N L+ G+ S V++A++++ +M P+ TY+ +I G
Sbjct: 274 SLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHG 333
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
L + + A + +M KGF + + L++A
Sbjct: 334 LCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNA 368
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D +T + ++A R S +L Q+ + G+S D + TT++ K+G + A+ +F
Sbjct: 108 DALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
+M + DV S NALI G R SEAM+LY+ M++ G EVT
Sbjct: 168 DEMPVR----DVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVT 212
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 17/140 (12%)
Query: 3 ILP--DVVTFTILVEAFLREGSSDI---AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGK 57
++P DVVT+ ++ ++ G A+KL D+M S D + T+I K+ +
Sbjct: 96 VMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMP----SRDSFSWNTMISGYAKNRR 151
Query: 58 IGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNL 117
IG A +F M E+ + +S +A+I GFC++ V A+ L+ +M P D
Sbjct: 152 IGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKM----PVKDSSPLCA 203
Query: 118 IIRGLIVEKKLSVASRVWGQ 137
++ GLI ++LS A+ V GQ
Sbjct: 204 LVAGLIKNERLSEAAWVLGQ 223
>AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15009605-15012319 FORWARD
Length = 904
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G + + L++A+ ++ + + +L +M K PD Y +I + G I
Sbjct: 762 DGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDE 821
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
+ ++ E G+ PD+ S N LI + V EA+ L +EM+ R PD+VTY ++
Sbjct: 822 VADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVT 881
Query: 121 GL 122
L
Sbjct: 882 AL 883
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 70/151 (46%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
++ ++ + R D A++++D M + + + ++ + GK+ LA +I M
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
G P++I+ N LI G+ K F++ A L+ + + G PDE +Y +I G
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400
Query: 129 SVASRVWGQMMEKGFTLDRANSEILISANSR 159
A + ++ G+ + N LI+ ++
Sbjct: 401 EEAKHYYQELKRCGYKPNSFNLFTLINLQAK 431
>AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: EMB2745 (EMBRYO DEFECTIVE 2745)
(TAIR:AT5G39710.1); Has 19818 Blast hits to 5849
proteins in 171 species: Archae - 3; Bacteria - 16;
Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0;
Other Eukaryotes - 1100 (source: NCBI BLink). |
chr4:16599976-16605994 REVERSE
Length = 1089
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P + TF +L+ + A+ +L + + G++ D YTT+I KSGK+ +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M G+ ++ + ALI+G ++ +V++A Y ++S+ PD V +N +I
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 125 EKKLSVASRVWGQMMEKGFTLD 146
+ A V +M + +D
Sbjct: 585 SGAVDRAFDVLAEMKAETHPID 606
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 6/158 (3%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ ++ TF L++ R G A + + PDR+ + +I +SG +
Sbjct: 531 SGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDR 590
Query: 61 AHTIFCDMVEQGIP--PDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
A + +M + P PD IS AL+ C + +V A ++Y+ + G Y +
Sbjct: 591 AFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIA 650
Query: 119 IRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
+ A ++ M EK T D E+ SA
Sbjct: 651 VNSCSKSGDWDFACSIYKDMKEKDVTPD----EVFFSA 684
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+V +TI V + + G D A + M + ++PD +F++ +I + + A I
Sbjct: 644 PEV--YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGI 701
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
D QGI IS ++L+ C + +A++LYE+++S P T N +I L
Sbjct: 702 LQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCE 761
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
+L A ++ G + +L+ A+ R
Sbjct: 762 GNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASER 796
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I PD ++ L++A G + AK++ + K GI YT + KSG A
Sbjct: 605 IDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFAC 664
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
+I+ DM E+ + PD + +ALI+ + + EA + ++ +S+G ++Y+ ++
Sbjct: 665 SIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLM 721
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+VV++T ++ F +E DI KL +M K P+ +T ++ SG +G ++
Sbjct: 185 NVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVH 244
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
C + G+ + N+LI+ +CK + +A +++++ ++ D V++N +I G
Sbjct: 245 CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNK----DVVSWNSMIAGYAQH 300
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
A ++ MM K T A + + + ++ R A
Sbjct: 301 GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAG 337
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+ TFT L+ A G+ + + Q MG+ ++I CK G + A I
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSR-GPYPDEVTY 115
F +Q DV+S N++I G+ + +A++L+E M + G PD +TY
Sbjct: 279 F----DQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITY 326
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 11 TILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVE 70
+L+ + G D A+++ D+M + D + T+I S ++ A +F
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPE----RDEFTWNTMIVAYSNSRRLSDAEKLF----R 83
Query: 71 QGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSV 130
+ IS NALI+G+CKS EA L+ EMQS G P+E T ++R L
Sbjct: 84 SNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLR 143
Query: 131 ASRVWGQMMEKGFTLD 146
++ G ++ GF LD
Sbjct: 144 GEQIHGHTIKTGFDLD 159
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I DV+++T LV GS D A KL M GI+PD+I +++ + +
Sbjct: 391 IEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQ 450
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
+ + ++ G P + N+L+ + K + +A ++ M+ R D +T+ +I G
Sbjct: 451 QVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR----DLITWTCLIVGY 506
Query: 123 IVEKKLSVASRVWGQM 138
L A R + M
Sbjct: 507 AKNGLLEDAQRYFDSM 522
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD T+ L++A + + + + + G +++ G + A+ +
Sbjct: 119 PDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV 178
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M E+ D+++ N++INGF ++ + EA+ LY EM S+G PD T ++
Sbjct: 179 FDKMPEK----DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 234
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
L++ RV M++ G T + +S +L+ +R
Sbjct: 235 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR 269
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+V + ++ F G + A L +M GI PD +++ K G + L +
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH 245
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M++ G+ ++ S N L++ + + RV EA L++EM + + V++ +I GL V
Sbjct: 246 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK----NSVSWTSLIVGLAV 300
>AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:644458-648421 REVERSE
Length = 852
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 5 PDVVTFTILVEA----FLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
P T+ IL++A + R K+L+D+M +G+SP++I ++T+I SG +
Sbjct: 524 PTTATYNILLKACGTDYYR------GKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEG 577
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A I M G PDV++ I ++ + A L+EEM+ P+ VTYN +++
Sbjct: 578 AVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLK 637
Query: 121 G 121
Sbjct: 638 A 638
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+ +T++ L++ G + A ++L M G PD + YTT I ++ + LA
Sbjct: 554 GLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLA 613
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKS---FRVSEAMQLYEEMQSRGPYPDE 112
++F +M I P+ ++ N L+ K V + + +Y++M++ G P++
Sbjct: 614 FSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPND 667
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 16/138 (11%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDR--IFYTTIIGHLCKSGKIGLAHT 63
+VV++T +V+ +++EG A+ L +M P+R + +T + G L G+I A
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVMFGGLIDDGRIDKARK 162
Query: 64 IFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLI 123
++ DM+ DV++ +I G C+ RV EA +++EM+ R + VT+ +I G
Sbjct: 163 LY-DMMP---VKDVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMITGYR 214
Query: 124 VEKKLSVASRVWGQMMEK 141
++ VA +++ M EK
Sbjct: 215 QNNRVDVARKLFEVMPEK 232
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTII---GHLCKSGKIGLAH 62
D+V F ++ + +D A L+ M +GI PD I + +I H+ K+
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
+ C G PDV+S ++I+G +F+ +A +++M + G YP+ T
Sbjct: 242 ELMC---LDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSAT 290
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 13 LVEAFLREGSSDIAKKLLDQMTKMGI------------SPDRIFYTTIIGHLCKSGKIGL 60
LV F E + I L+D +K G D + + +I + +
Sbjct: 142 LVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADE 201
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A + DM GI PDVI+ NALI+GF + ++ E M G PD V++ II
Sbjct: 202 ALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIIS 261
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISA 156
GL+ + A + QM+ G + A L+ A
Sbjct: 262 GLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPA 297
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 78/161 (48%), Gaps = 8/161 (4%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+LP+ TF ++++ + + +++ + K+G D +T++I ++G++ A
Sbjct: 129 GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
H +F ++ DV+S ALI G+ + A +L++E+ P D V++N +I G
Sbjct: 189 HKVF----DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI----PVKDVVSWNAMISG 240
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSRDAA 162
A ++ MM+ D + ++SA ++ +
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
DVV++ ++ + G+ A +L M K + PD T++ +SG I L +
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+ + G ++ NALI+ + K + A L+E R PY D +++N +I G
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE----RLPYKDVISWNTLIGGYTHM 345
Query: 126 KKLSVASRVWGQMMEKGFT 144
A ++ +M+ G T
Sbjct: 346 NLYKEALLLFQEMLRSGET 364
>AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796);
ATP binding | chr3:18256086-18257975 FORWARD
Length = 629
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
TF ++V + G + A ++ QM SPD + + ++ LC + + A ++ +M
Sbjct: 352 TFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEM 411
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
E+ + PD + L++ K ++ E Y+ M P+ YN + LI KL
Sbjct: 412 EEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKL 471
Query: 129 SVASRVWGQMMEK 141
A + M+ K
Sbjct: 472 DDAKSFFDMMVSK 484
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 45 YTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCN-----ALINGFCKSFRVSEAMQL 99
Y ++ L ++GK A +F + ++ PP ++ N ++NG+C + EAM++
Sbjct: 313 YNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEV 372
Query: 100 YEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILI 154
+ +M PD +++N ++ L + L+ A +++G+M EK D +L+
Sbjct: 373 FRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
PD ++F L+ A+KL +M + + PD Y ++ K GKI
Sbjct: 383 PDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAY 442
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
+ MVE + P++ N L + K+ ++ +A ++ M S+ DE Y I+R L
Sbjct: 443 YKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDE-AYKFIMRALSE 501
Query: 125 EKKLSVASRVWGQMME 140
+L ++ +M++
Sbjct: 502 AGRLDEMLKIVDEMLD 517
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+VV++T LV+ ++ G D+A+ L +M + +++ +T ++ + G+I A
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPE----KNKVSWTVMLIGFLQDGRIDDA---- 160
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
C + E D I+ ++I+G CK RV EA ++++EM R +T+ ++ G
Sbjct: 161 CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQN 216
Query: 126 KKLSVASRVWGQMMEK 141
++ A +++ M EK
Sbjct: 217 NRVDDARKIFDVMPEK 232
>AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) |
chr1:6760032-6762581 FORWARD
Length = 725
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 5 PDVVTFTILVEAFLREGSS----DIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
P+ V + L+ LREG++ +A+ +LD+ + D Y+ +I K I
Sbjct: 347 PNRVDWIALINQ-LREGNTHAYLKVAEGVLDEKSFNASISD---YSKLIHIHAKENHIED 402
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
I M + GI PD+++ AL++ + KS A + +E ++S G PDE Y +I
Sbjct: 403 VERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMIL 462
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLDRANSEILIS 155
G + K + R+ +M K +A+ E+ ++
Sbjct: 463 GYVNAGKPKLGERLMKEMQAKEL---KASEEVYMA 494
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
NG+ + L++ F + G A+++ D + K I + +TT+I + G + +
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARCGLLDV 341
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
+ +F DM E+ DV+ NA+I G ++ R +A+ L++EMQ+ PDE+T
Sbjct: 342 SRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G P L++ + + + A++L D++++ PD+I TT++ C SG I LA
Sbjct: 44 GFQPRAHILNRLIDVYCKSSELNYARQLFDEISE----PDKIARTTMVSGYCASGDITLA 99
Query: 62 HTIFCDMVEQGIP---PDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLI 118
+F + P D + NA+I GF + A+ L+ +M+ G PD T+ +
Sbjct: 100 RGVF-----EKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASV 154
Query: 119 IRGL 122
+ GL
Sbjct: 155 LAGL 158
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G DV L+ ++ G+ +A L D++ + PD + + ++I K+GK+ +A
Sbjct: 145 GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYVKAGKMDIA 200
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
T+F M E+ + IS +I+G+ ++ EA+QL+ EMQ+ PD V+
Sbjct: 201 LTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 1 NGILP-DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG 59
+GI P D VTF+ L+++ +R + K + ++ + I PD + Y ++I KSG
Sbjct: 55 DGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSA 114
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
A +F M G DV+S +A++ + + R +A++++ E G P++ Y +I
Sbjct: 115 KAEDVFETMRRFG-KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173
Query: 120 RGLIVEKKLSVASRVWGQMMEKG 142
R + V G +M+ G
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTG 196
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G L +VV +++A+ + G + AK+ D+MT I +TT+I K G + A
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH----IWTTLISGYAKLGDMEAA 264
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYN 116
+FC+M E+ + +S ALI G+ + + A+ L+ +M + G P++ T++
Sbjct: 265 EKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+ + L+ +++ G A K+ DQM + + ++ KSG + A +
Sbjct: 80 PNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYS----WNNMVSGYVKSGMLVRARVV 135
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M E+ DV+S N ++ G+ + + EA+ Y+E + G +E ++ ++ +
Sbjct: 136 FDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 125 EKKLSVASRVWGQMMEKGF 143
++L + + GQ++ GF
Sbjct: 192 SRQLQLNRQAHGQVLVAGF 210
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+VV++ I++ F +E SD + + L +M G P+ + +++G +SG + IF
Sbjct: 280 NVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIF 339
Query: 66 CDMVEQGIP-PDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
IP P V + NA+++G+ EA+ + +MQ + PD+ T ++I+
Sbjct: 340 -----SSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVIL 389
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCK--SGKIGL-AH 62
DVV++ ++ +R+G + A + +M G P R +++ K G G+ H
Sbjct: 68 DVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCH 127
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCK-SFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+ V+ G+ ++ NAL++ + K F V ++++E + P+EV+Y +I G
Sbjct: 128 GV---AVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ----PNEVSYTAVIGG 180
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
L E K+ A +++ M EKG +D
Sbjct: 181 LARENKVLEAVQMFRLMCEKGVQVD 205
>AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24528423-24529988 REVERSE
Length = 521
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 7/150 (4%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG- 59
N I PD +L+ + D A +L +M++ G Y ++ +CK +
Sbjct: 239 NEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKD 298
Query: 60 ------LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEV 113
+ +M +G+P + + N LIN CK R EAM L+ M G PD
Sbjct: 299 PFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAE 358
Query: 114 TYNLIIRGLIVEKKLSVASRVWGQMMEKGF 143
TY ++IR L ++ + +M G+
Sbjct: 359 TYLVLIRSLYQAARIGEGDEMIDKMKSAGY 388
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 5 PDVVTF-TILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYT-TIIGHLC---KSGKIG 59
P F TI+ L E SS +K+ +M + + PD F+T + C K+G +
Sbjct: 77 PSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPD--FHTFPFVFKACAAKKNGDLT 134
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
L T+ C + G+ D+ + N LI + + A+QL++E P D VTYN++I
Sbjct: 135 LVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDE----NPQRDVVTYNVLI 190
Query: 120 RGLIVEKKLSVASRVWGQM 138
GL+ +++ A ++ M
Sbjct: 191 DGLVKAREIVRARELFDSM 209
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+L D+ T L+ + D A +L D+ + D + Y +I L K+ +I A
Sbjct: 147 GLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQR----DVVTYNVLIDGLVKAREIVRA 202
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
+F M + D++S N+LI+G+ + EA++L++EM + G PD V
Sbjct: 203 RELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVA 251
>AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) |
chr4:18395294-18397578 FORWARD
Length = 563
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%)
Query: 5 PDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTI 64
P+VVT+ IL+ AF + G D L + +SPD + ++ K+G I +
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
M PD+I+ N LI+ + K + Q ++ + P T+N +I
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMI 320
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
I D V +T ++ + + G S A KL +M K G+SPD +T++ G + L
Sbjct: 291 IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 350
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLII 119
I E + ++ L++ + K RV EA++++E M P +E T+N +I
Sbjct: 351 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM----PVKNEATWNAMI 403
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+G+ PD T+ + A + + + + + K+G+ D ++I K G++G
Sbjct: 122 SGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGY 181
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
A +F ++ E+ D +S N++I+G+ ++ +AM L+ +M+ G PDE T
Sbjct: 182 ARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 231
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 69/140 (49%), Gaps = 8/140 (5%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD TFT +++A + ++ + G + +I G +G+A
Sbjct: 107 GVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIA 166
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F D + ++ +++ +G+ K ++ EAM+L++EM PY D+V +N++I G
Sbjct: 167 SELFDDSAK----AHKVAWSSMTSGYAKRGKIDEAMRLFDEM----PYKDQVAWNVMITG 218
Query: 122 LIVEKKLSVASRVWGQMMEK 141
+ K++ A ++ + EK
Sbjct: 219 CLKCKEMDSARELFDRFTEK 238
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 47 TIIGHLCKS------GKIGLAHTIFCDMVEQGIP-PDVISCNALINGFCKSFRVSEAMQL 99
+++G L S G + AH +F + IP PDV CN ++ G +S + + + L
Sbjct: 45 SVVGELIYSASLSVPGALKYAHKLFDE-----IPKPDVSICNHVLRGSAQSMKPEKTVSL 99
Query: 100 YEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDR--ANSEILISAN 157
Y EM+ RG PD T+ +++ + S G+++ GF L+ N+ IL AN
Sbjct: 100 YTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHAN 159
Query: 158 SRD 160
D
Sbjct: 160 CGD 162
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
V ++ + + + G D A +L D+M D++ + +I K ++ A +F
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCKEMDSARELFDR 234
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
E+ DV++ NA+I+G+ EA+ +++EM+ G +PD VT
Sbjct: 235 FTEK----DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVT 277
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD T+ +++ S+ + K++ Q+ K + D +T++ K G + +
Sbjct: 556 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS 615
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F E+ + D ++ NA+I G+ + EA+QL+E M P+ VT+ I+R
Sbjct: 616 RLMF----EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 671
Query: 122 L----IVEKKLSVASRVWGQMMEKGFTLD 146
+++K L + MM++ + LD
Sbjct: 672 CAHMGLIDKGLE-----YFYMMKRDYGLD 695
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 8 VTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
V++ ++ ++ + S+ A+ L +M +MGI+PD+ Y T++ GL I
Sbjct: 527 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQ 586
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
++++ + DV C+ L++ + K + ++ ++E+ R D VT+N +I G K
Sbjct: 587 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR----DFVTWNAMICGYAHHGK 642
Query: 128 LSVASRVWGQMM 139
A +++ +M+
Sbjct: 643 GEEAIQLFERMI 654
>AT1G06270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1918242-1919273 REVERSE
Length = 343
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 1 NGILPDVVTFTILVEAFL--REGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKI 58
+G LP+ T +L +A+L R GS +A ++++M +G SPD ++ LC K+
Sbjct: 129 SGCLPNPQTHLLLSDAWLERRRGSQSVAD-IINEMKLIGYSPDTGTCNYLVSSLCAVDKL 187
Query: 59 GLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG 107
A + +M G PDV S A+IN C + + ++ +++ +EM S+
Sbjct: 188 DEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKIVKEMVSKA 236
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 39/178 (21%)
Query: 2 GILPDVVTFTILVEAFLREGSSDI--AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIG 59
G+ D+ L++ + R G + A KL ++M++ D + + +++G L K+G++
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELR 202
Query: 60 LAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRG------------ 107
A +F +M ++ D+IS N +++G+ + +S+A +L+E+M R
Sbjct: 203 DARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYS 258
Query: 108 -----------------PYPDEVTYNLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRA 148
P + VT+ +II G + L A R+ QM+ G D A
Sbjct: 259 KAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+VVT+TI++ + +G A +L+DQM G+ D +I+ +SG + L I
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+ + + NAL++ + K + +A ++ ++ P D V++N ++ GL V
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI----PKKDLVSWNTMLHGLGVH 394
Query: 126 KKLSVASRVWGQMMEKGFTLDR 147
A ++ +M +G D+
Sbjct: 395 GHGKEAIELFSRMRREGIRPDK 416
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GILPD TF L++A + + ++L K+G+ + T+I + +
Sbjct: 123 DGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDS 182
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVT 114
A +F +VE P V+ NA+I G+ + R +EA+ L+ EMQ + P+E+T
Sbjct: 183 ARCVFDRIVE----PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G DV L++ + + G D +K+ D+M I + +TT++ L + ++ A
Sbjct: 149 GFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI----VSWTTMLYGLVSNSQLDSA 204
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRG 121
+F M + +V+S A+I + K+ R EA QL+ MQ P+E T +++
Sbjct: 205 EIVFNQMPMR----NVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 122 LIVEKKLSVASRVWGQMMEKGFTLD 146
LS+ V + GF LD
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLD 285
>AT5G66631.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G16010.1); Has
7784 Blast hits to 2776 proteins in 77 species: Archae -
0; Bacteria - 0; Metazoa - 9; Fungi - 51; Plants - 7639;
Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).
| chr5:26596207-26598192 FORWARD
Length = 661
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%)
Query: 26 AKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGIPPDVISCNALIN 85
A + L+ M G+SPD ++ ++ H G+I +F + + G+ PD L+
Sbjct: 504 ALETLEDMMLTGVSPDIQTFSGLMYHFALQGEIQTVERLFSMVRQIGLEPDPYMLKLLVQ 563
Query: 86 GFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVASRV 134
+C+ R A +++++M+ PD T L+++ L E+K A+ V
Sbjct: 564 AYCRCERSVLAYRVFQDMKDSNLMPDRETKELLVKSLWREEKRKEAAAV 612
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ PD+ TF+ L+ F +G ++L + ++G+ PD ++ C+ + LA
Sbjct: 515 GVSPDIQTFSGLMYHFALQGEIQTVERLFSMVRQIGLEPDPYMLKLLVQAYCRCERSVLA 574
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQL---YEE 102
+ +F DM + + PD + L+ + + EA + YEE
Sbjct: 575 YRVFQDMKDSNLMPDRETKELLVKSLWREEKRKEAAAVEESYEE 618
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
++V + LV A+ L+ +M K GI PD I + ++ GK A +
Sbjct: 22 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 81
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M E+G+ P+V+S A+ +G K+ A++++ +MQ G P+ T + +++ L
Sbjct: 82 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 141
Query: 126 KKLSVASRVWGQMMEKGFTLD 146
L V G + K D
Sbjct: 142 SLLHSGKEVHGFCLRKNLICD 162
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
GI PD +T+ L + G + A ++ +M + G++P+ + +T I K+G A
Sbjct: 53 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 112
Query: 62 HTIFCDMVEQGIPPDVISCNALI 84
+F M E+G+ P+ + + L+
Sbjct: 113 LKVFIKMQEEGVGPNAATMSTLL 135
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIF--YTTIIGHLCKSGKIGLAHTI 64
++ + +L+ + R +A L M P+R ++T+I SG++ A +
Sbjct: 196 ILIWNVLINGYCRAKDMHMATTLFRSM------PERNSGSWSTLIKGYVDSGELNRAKQL 249
Query: 65 FCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
F M E+ +V+S LINGF ++ A+ Y EM +G P+E T ++
Sbjct: 250 FELMPEK----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSK 305
Query: 125 EKKLSVASRVWGQMMEKGFTLDRANSEILISANSR----DAAST 164
L R+ G +++ G LDRA L+ ++ D A+T
Sbjct: 306 SGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAAT 349
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 2 GILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLA 61
G+ P+ T ++ A + G+ ++ + GI DR T ++ K G++ A
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 62 HTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY 115
T+F +M + D++S A+I G+ R +A+Q + +M G PDEV +
Sbjct: 348 ATVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVF 397
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+VV++T L+ F + G + A +M + G+ P+ ++ KSG +G I
Sbjct: 257 NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
+++ GI D AL++ + K + A ++ M + D +++ +I+G V
Sbjct: 317 GYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMN----HKDILSWTAMIQGWAVH 372
Query: 126 KKLSVASRVWGQMMEKG 142
+ A + + QMM G
Sbjct: 373 GRFHQAIQCFRQMMYSG 389
>AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26838850-26841489 REVERSE
Length = 879
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKM-GISPDRIFYTTIIGHLCKSGKIGLAHTIFCD 67
+ I + A ++ G + L +++ + G + Y +++ L K + + I +
Sbjct: 323 AYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTE 382
Query: 68 MVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKK 127
M+ +G+ P+ + NA + FCK+ V EA++LY G P ++YN +I L +
Sbjct: 383 MMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANES 442
Query: 128 LSVASRVWGQMMEKGFTL 145
+ A V +++G L
Sbjct: 443 VEQAYDVLKGAIDRGHFL 460
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 7 VVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFC 66
V + + +E G +A+ + D M + GI+P ++ K+ KI A F
Sbjct: 603 VQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFH 662
Query: 67 DMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEK 126
D+ EQG + +I G CK+ ++ +AM EEM+ G P Y + I+ L E+
Sbjct: 663 DLREQGKTKKRLY-QVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEE 721
Query: 127 KLSVA 131
K A
Sbjct: 722 KYDEA 726
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
+V + +V L+E + D +L +M G+SP++ + CK+G + A ++
Sbjct: 356 EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELY 415
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
E G P +S N LI+ C + V +A + + RG + T++ + L +
Sbjct: 416 RSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWK 475
Query: 126 KKLSVA 131
K +A
Sbjct: 476 GKPDMA 481
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D+V + ++ F G + A L +M GI PD +++ K G + L +
Sbjct: 53 DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH 112
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIV 124
M++ G+ ++ S N L++ + + RV EA L++EM + + V++ +I GL V
Sbjct: 113 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK----NSVSWTSLIVGLAV 167
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 56 GKIGLAHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY 115
G + A+ +F M E+ D+++ N++INGF ++ + EA+ LY EM S+G PD T
Sbjct: 37 GDVASAYKVFDKMPEK----DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 116 NLIIRGLIVEKKLSVASRVWGQMMEKGFTLDRANSEILISANSR 159
++ L++ RV M++ G T + +S +L+ +R
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR 136
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D + +T +V A+ R D A L +QM++ + +G G + A ++F
Sbjct: 189 DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMG----LGNLEQAESLF 244
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
M + D+IS +I G+ ++ R EA+ ++ +M G PDEVT + +I
Sbjct: 245 NQMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHL 300
Query: 126 KKLSVASRVWGQMMEKGFTLD 146
L + V ++ GF LD
Sbjct: 301 GVLEIGKEVHMYTLQNGFVLD 321
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
+ P +T+ + +A+ R G + ++L + K G+ D T++ G + A
Sbjct: 122 VKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAW 181
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGL 122
IF M I DV++ N++I GF K + +A L++EM P + V++N +I G
Sbjct: 182 RIFLGM----IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEM----PQRNGVSWNSMISGF 233
Query: 123 IVEKKLSVASRVWGQMMEK-----GFTL 145
+ + A ++ +M EK GFT+
Sbjct: 234 VRNGRFKDALDMFREMQEKDVKPDGFTM 261
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 12 ILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQ 71
I + +F SS I + + K G+ + ++ K+ I A +F +M +
Sbjct: 28 IRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHR 87
Query: 72 GIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLSVA 131
V + +I+ F KS + A+ L+EEM + G +P+E T++ ++R + +S
Sbjct: 88 ----TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYG 143
Query: 132 SRVWGQMMEKGF 143
RV G +++ GF
Sbjct: 144 GRVHGSVIKTGF 155
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 5/146 (3%)
Query: 1 NGILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGL 60
+GI D ++ + A G+ + K L K G S +++ K G +
Sbjct: 522 DGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLED 581
Query: 61 AHTIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIR 120
A +F E+ PDV+S N L++G + +S A+ +EEM+ + PD VT+ LI+
Sbjct: 582 AKKVF----EEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTF-LILL 636
Query: 121 GLIVEKKLSVASRVWGQMMEKGFTLD 146
+L+ + Q+M+K + ++
Sbjct: 637 SACSNGRLTDLGLEYFQVMKKIYNIE 662
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D +T+T LV F G ++A +++ M GI D++ I G + +
Sbjct: 492 DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLH 551
Query: 66 CDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVE 125
C V+ G N+L++ + K + +A +++EE+ + PD V++N ++ GL
Sbjct: 552 CYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT----PDVVSWNGLVSGLASN 607
Query: 126 KKLSVASRVWGQMMEKGFTLDRANSEILISANS 158
+S A + +M K D IL+SA S
Sbjct: 608 GFISSALSAFEEMRMKETEPDSVTFLILLSACS 640
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 9 TFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDM 68
+ L+ + G + A L QM + G+ PDR + ++ G + + I D+
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 69 VEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKL 128
V++G DV NAL+ + K + +A +++ + P+ D V++N ++ G + L
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMI----PHKDYVSWNSMLTGYLHHGLL 277
Query: 129 SVASRVWGQMMEKGFTLDR 147
A ++ M++ G D+
Sbjct: 278 HEALDIFRLMVQNGIEPDK 296
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 3 ILPDVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAH 62
ILP+ T ++ + GS K + M + GI D + +T+ I + G I +A
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 63 TIFCDMVEQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEVTY 115
T+F M E+ +VIS +++IN F + EA+ + +M+S+ P+ VT+
Sbjct: 368 TVFDMMPER----NVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTF 416
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 6 DVVTFTILVEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIF 65
D V++T +V A+ + G + +L D+M + G+ PD + T +I ++G + F
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495
Query: 66 CDMV-EQGIPPDVISCNALINGFCKSFRVSEAMQLYEEMQSRGPYPDEV 113
M E GI P + + +I+ F +S R+ EAM+ M P+P +
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM----PFPPDA 540