Jatropha Genome Database
- JcCA0193141.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0193141.20 - phase: 2 /pseudo/partial
(94 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G63380.1 | Symbols: | 4-coumarate--CoA ligase family protein... 79 6e-16
AT1G20500.1 | Symbols: | 4-coumarate-CoA ligase | chr1:7100502-... 76 5e-15
AT1G20510.1 | Symbols: OPCL1 | OPCL1 (OPC-8:0 COA LIGASE1); 4-co... 74 2e-14
AT4G05160.1 | Symbols: | 4-coumarate--CoA ligase, putative / 4-... 74 2e-14
AT1G20480.1 | Symbols: | 4-coumarate--CoA ligase family protein... 68 1e-12
AT5G38120.1 | Symbols: | 4-coumarate--CoA ligase family protein... 68 1e-12
AT4G19010.1 | Symbols: | 4-coumarate--CoA ligase family protein... 67 2e-12
AT3G21240.1 | Symbols: 4CL2, AT4CL2 | 4CL2 (4-COUMARATE:COA LIGA... 64 2e-11
AT1G65060.1 | Symbols: 4CL3 | 4CL3; 4-coumarate-CoA ligase | chr... 63 4e-11
AT1G51680.1 | Symbols: 4CL1, 4CL.1, AT4CL1 | 4CL1 (4-COUMARATE:C... 57 3e-09
AT3G21230.1 | Symbols: 4CL5 | 4CL5 (4-coumarate:CoA ligase 5); 4... 55 1e-08
AT1G62940.1 | Symbols: ACOS5 | ACOS5 (ACYL-COA SYNTHETASE 5); 4-... 52 9e-08
>AT5G63380.1 | Symbols: | 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein |
chr5:25387581-25390026 REVERSE
Length = 562
Score = 79.0 bits (193), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 47/53 (88%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
+P+E+AG++P+AF+VR+ G +NE+QI DF+A+QV PYK++RRV F++++PKN
Sbjct: 488 FPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFINAIPKN 540
>AT1G20500.1 | Symbols: | 4-coumarate-CoA ligase |
chr1:7100502-7102847 REVERSE
Length = 550
Score = 75.9 bits (185), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 46/54 (85%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNA 73
+P++EAGQ P+A+VVR+H ++E Q+ DFI++QVAPYK+IR+V F++S+PK A
Sbjct: 480 FPDKEAGQYPMAYVVRKHESNLSEKQVIDFISKQVAPYKKIRKVSFINSIPKTA 533
>AT1G20510.1 | Symbols: OPCL1 | OPCL1 (OPC-8:0 COA LIGASE1);
4-coumarate-CoA ligase | chr1:7103645-7105856 REVERSE
Length = 546
Score = 74.3 bits (181), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 43/53 (81%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
+P++E GQ P+A+VVR+ G ++E I +F+A+QVAPYKRIR+V FV S+PKN
Sbjct: 474 FPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKN 526
>AT4G05160.1 | Symbols: | 4-coumarate--CoA ligase, putative /
4-coumaroyl-CoA synthase, putative |
chr4:2664451-2666547 FORWARD
Length = 544
Score = 73.9 bits (180), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNA 73
+P+EEAG+VP+AFVVR I E I+ FIA+QVAPYKR+RRV F+ +PK+A
Sbjct: 474 FPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVSFISLVPKSA 527
>AT1G20480.1 | Symbols: | 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein |
chr1:7094978-7097073 REVERSE
Length = 565
Score = 68.2 bits (165), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 43/52 (82%)
Query: 21 PNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
P+ +AGQ P+A++VR+ G ++ES+I F+A+QV+PYK+IR+V F+ S+PKN
Sbjct: 496 PDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVTFLASIPKN 547
>AT5G38120.1 | Symbols: | 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein |
chr5:15213773-15216137 FORWARD
Length = 550
Score = 67.8 bits (164), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 42/52 (80%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPK 71
+P++EAGQ P+A+V R+ + E ++ DFI++QVAPYK+IR+V F+DS+PK
Sbjct: 480 FPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPK 531
>AT4G19010.1 | Symbols: | 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein |
chr4:10411715-10414221 REVERSE
Length = 566
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 41/52 (78%)
Query: 21 PNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
PNEE G++PVAFVVR+ ++E + ++A QVAPY+++R+V+ V+S+PK+
Sbjct: 493 PNEECGEIPVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVVMVNSIPKS 544
>AT3G21240.1 | Symbols: 4CL2, AT4CL2 | 4CL2 (4-COUMARATE:COA LIGASE
2); 4-coumarate-CoA ligase | chr3:7454497-7457314
REVERSE
Length = 556
Score = 63.5 bits (153), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 2 LLLNRAQINLTRNI*MNRYPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIR 61
LL+ +IN + M E+AG+VPVAFVVR I+E +IK F+++QV YKRI
Sbjct: 469 LLIGHPEINDVAVVAMKE---EDAGEVPVAFVVRSKDSNISEDEIKQFVSKQVVFYKRIN 525
Query: 62 RVIFVDSLPK 71
+V F DS+PK
Sbjct: 526 KVFFTDSIPK 535
>AT1G65060.1 | Symbols: 4CL3 | 4CL3; 4-coumarate-CoA ligase |
chr1:24167385-24171457 REVERSE
Length = 561
Score = 62.8 bits (151), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 22 NEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
+E AG+VPVAFVVR +G I E +K+++A+QV YKR+ +V FV S+PK+
Sbjct: 496 DEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVFFVASIPKS 546
>AT1G51680.1 | Symbols: 4CL1, 4CL.1, AT4CL1 | 4CL1 (4-COUMARATE:COA
LIGASE 1); 4-coumarate-CoA ligase |
chr1:19159007-19161464 REVERSE
Length = 561
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 23 EEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNAP 74
E AG+VPVAFVV+ ++E +K F+++QV YKRI +V F +S+PK AP
Sbjct: 494 EAAGEVPVAFVVKSKDSELSEDDVKQFVSKQVVFYKRINKVFFTESIPK-AP 544
>AT3G21230.1 | Symbols: 4CL5 | 4CL5 (4-coumarate:CoA ligase 5);
4-coumarate-CoA ligase | chr3:7448231-7451947 REVERSE
Length = 570
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 22 NEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPK 71
+E A +VPVAFV R G ++ E +K ++ +QV YKRI+ V F++ +PK
Sbjct: 500 DEVADEVPVAFVARSQGSQLTEDDVKSYVNKQVVHYKRIKMVFFIEVIPK 549
>AT1G62940.1 | Symbols: ACOS5 | ACOS5 (ACYL-COA SYNTHETASE 5);
4-coumarate-CoA ligase/ long-chain-fatty-acid-CoA
ligase/ medium-chain-fatty-acid-CoA ligase |
chr1:23310554-23312747 FORWARD
Length = 542
Score = 51.6 bits (122), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 21 PNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
P+EEAG++P A VV E I +F+A VA YK++R V FVDS+PK+
Sbjct: 471 PDEEAGEIPAACVVINPKATEKEEDILNFVAANVAHYKKVRAVHFVDSIPKS 522