Jatropha Genome Database

JcCA0172201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0172201.10 - phase: 0 /partial
         (163 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G74030.1 | Symbols:  | enolase, putative | chr1:27839465-2784...   266   4e-72
AT2G36530.1 | Symbols: LOS2 | LOS2; copper ion binding / phospho...   197   2e-51
AT2G29560.1 | Symbols:  | enolase, putative | chr2:12646635-1264...   158   1e-39

>AT1G74030.1 | Symbols:  | enolase, putative |
           chr1:27839465-27841901 REVERSE
          Length = 477

 Score =  266 bits (681), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 126/140 (90%), Positives = 134/140 (95%)

Query: 7   TRNQDDVDAIMLDIDGTPNKSKLGANAILGVSLSICRAGAGAKGLPLYKHIQELSGTKEL 66
            RNQ DVDA+ML++DGTPNKSKLGANAILGVSLS+CRAGAGAKG+PLYKHIQE SGTKEL
Sbjct: 129 VRNQADVDALMLELDGTPNKSKLGANAILGVSLSVCRAGAGAKGVPLYKHIQETSGTKEL 188

Query: 67  VMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHTLKGIIKAKYGQD 126
           VMPVPAFNVINGGSHAGN+LAMQEFMILPVGATSF+EA +MGSEVYHTLKGIIK KYGQD
Sbjct: 189 VMPVPAFNVINGGSHAGNSLAMQEFMILPVGATSFSEAFQMGSEVYHTLKGIIKTKYGQD 248

Query: 127 ACNVGDEGGFAPNVQDNRGG 146
           ACNVGDEGGFAPNVQDNR G
Sbjct: 249 ACNVGDEGGFAPNVQDNREG 268


>AT2G36530.1 | Symbols: LOS2 | LOS2; copper ion binding /
           phosphopyruvate hydratase | chr2:15321081-15323786
           REVERSE
          Length = 444

 Score =  197 bits (502), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 96/143 (67%), Positives = 114/143 (79%), Gaps = 6/143 (4%)

Query: 10  QDDVDAIML-DIDGTPN-----KSKLGANAILGVSLSICRAGAGAKGLPLYKHIQELSGT 63
           Q  +D  M+ ++DGT N     K KLGANAIL VSL++C+AGA   G+PLYKHI  L+G 
Sbjct: 86  QTAIDNFMVHELDGTQNEWGWCKQKLGANAILAVSLAVCKAGAVVSGIPLYKHIANLAGN 145

Query: 64  KELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHTLKGIIKAKY 123
            ++V+PVPAFNVINGGSHAGN LAMQEFMILPVGA SF EA++MG EVYH LK +IK KY
Sbjct: 146 PKIVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAASFKEAMKMGVEVYHHLKSVIKKKY 205

Query: 124 GQDACNVGDEGGFAPNVQDNRGG 146
           GQDA NVGDEGGFAPN+Q+N+ G
Sbjct: 206 GQDATNVGDEGGFAPNIQENKEG 228


>AT2G29560.1 | Symbols:  | enolase, putative |
           chr2:12646635-12649694 FORWARD
          Length = 475

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 76/150 (50%), Positives = 101/150 (67%), Gaps = 1/150 (0%)

Query: 10  QDDVDAIMLDIDGTPNKSKLGANAILGVSLSICRAGAGAKGLPLYKHIQELSGTKELVMP 69
           Q  +D  M+D+D T  KS+LGANAIL VS++ C+AGA  K +PL KH+ +LSG   +V+P
Sbjct: 129 QGQIDQAMIDLDKTEKKSELGANAILAVSIAACKAGAAEKEVPLCKHLSDLSGRANMVLP 188

Query: 70  VPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHTLKGIIKAKYGQDACN 129
           VPAF V++GG HA N  A+QE MILP+GA+ F EAL+ GSE YH LK +I  K G   CN
Sbjct: 189 VPAFTVLSGGKHASNTFAIQEIMILPIGASRFEEALQWGSETYHHLKAVISEKNGGLGCN 248

Query: 130 VGDEGGFAPNVQDNRGGTCFAHRR-NREGW 158
           VG++GG AP++   + G        NR G+
Sbjct: 249 VGEDGGLAPDISSLKEGLELVKEAINRTGY 278