Jatropha Genome Database

JcCA0163731.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0163731.20 - phase: 2 /TE/partial
         (608 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   245   5e-65
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   131   1e-30
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    77   3e-14

>AT4G23160.1 | Symbols:  | protein kinase family protein |
           chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  245 bits (626), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/288 (44%), Positives = 174/288 (60%)

Query: 253 PNQICKPQKSLYGLKQASRQWILKLSQVLIXNGYTQSPSDHSLCTLHKFHSFTTLLIYVD 312
           PN +C  +KS+YGLKQASRQW LK S  LI  G+ QS SDH+         F  +L+YVD
Sbjct: 226 PNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVD 285

Query: 313 DVILVGNDLLKIQRVKXLLDGLFKIKDLGPLRFFLVLEIAQSPQGITLCQRKYALELLAE 372
           D+I+  N+   +  +K  L   FK++DLGPL++FL LEIA+S  GI +CQRKYAL+LL E
Sbjct: 286 DIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDE 345

Query: 373 TSFLASKPCSTPIDSNVKLSATTGTPLFDISSYRKLIGKLIHLTTTRPDLTSVVNQLSQI 432
           T  L  KP S P+D +V  SA +G    D  +YR+LIG+L++L  TR D++  VN+LSQ 
Sbjct: 346 TGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQF 405

Query: 433 LSASTSAHQLALHIVLRYIKQAPGLGLLFPXXXXIQLKAFSNSNGARCLDTRRMVIGYGV 492
             A   AHQ A+  +L YIK   G GL +     +QL+ FS+++   C DTRR   GY +
Sbjct: 406 SEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCM 465

Query: 493 YLGDSLXXXXXXXXXXXXXXXXEAEYRALTTTTCEIQWLSYLLNDLKI 540
           +LG SL                EAEYRAL+  T E+ WL+    +L++
Sbjct: 466 FLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL 513



 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 6/104 (5%)

Query: 55  PSPLPSRPQRIRRAPXYLKDYHCNLIATDSSLNNSIKHPLSAVISYQHTSPSYFHLISNS 114
           P P      R  R P YL+DY+C+ +A+ +       H +S  +SY+  SP Y   +   
Sbjct: 27  PEPSVHTSHRRTRKPAYLQDYYCHSVASLTI------HDISQFLSYEKVSPLYHSFLVCI 80

Query: 115 TSVFETKSYXEAVKHQVWRDAMSAELEALNKTQTWTLVTLPLEK 158
               E  +Y EA +  VW  AM  E+ A+  T TW + TLP  K
Sbjct: 81  AKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNK 124


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
           chrM:227709-228431 REVERSE
          Length = 240

 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 119/227 (52%), Gaps = 3/227 (1%)

Query: 307 LLIYVDDVILVGNDLLKIQRVKXLLDGLFKIKDLGPLRFFLVLEIAQSPQGITLCQRKYA 366
           LL+YVDD++L G+    +  +   L   F +KDLGP+ +FL ++I   P G+ L Q KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 367 LELLAETSFLASKPCSTPIDSNVKLSATTGTPLF-DISSYRKLIGKLIHLTTTRPDLTSV 425
            ++L     L  KP STP+   +KL+++  T  + D S +R ++G L +LT TRPD++  
Sbjct: 63  EQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 120

Query: 426 VNQLSQILSASTSAHQLALHIVLRYIKQAPGLGLLFPXXXXIQLKAFSNSNGARCLDTRR 485
           VN + Q +   T A    L  VLRY+K     GL       + ++AF +S+ A C  TRR
Sbjct: 121 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 180

Query: 486 MVIGYGVYLGDSLXXXXXXXXXXXXXXXXEAEYRALTTTTCEIQWLS 532
              G+  +LG ++                E EYRAL  T  E+ W S
Sbjct: 181 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
           chrM:68918-69253 REVERSE
          Length = 111

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 52/78 (66%)

Query: 413 IHLTTTRPDLTSVVNQLSQILSASTSAHQLALHIVLRYIKQAPGLGLLFPXXXXIQLKAF 472
           ++LT TRPDLT  VN+LSQ  SAS +A   A++ VL Y+K   G GL +     +QLKAF
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 473 SNSNGARCLDTRRMVIGY 490
           ++S+ A C DTRR V G+
Sbjct: 61  ADSDWASCPDTRRSVTGF 78